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Ni Y, Wang K, Jiang Y, Zhou R, Sha Y, Li H. Quantitative Assessment of Surgical Anatomy and Three-Dimensional Relationships in the Supralabyrinthine Space. ORL J Otorhinolaryngol Relat Spec 2016; 78:259-267. [PMID: 27614443 DOI: 10.1159/000448686] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2016] [Accepted: 07/19/2016] [Indexed: 11/19/2022]
Abstract
OBJECTIVE To explore and quantify the surgically relevant anatomic relationships and three-dimensional (3D) morphology of the supralabyrinthine space, and enable a deeper, clearer understanding of its regional anatomy. MATERIALS AND METHODS 3D-DOCTOR software was used to create a 3D reconstruction of the axial CT images and multiplanar reformatting of 55 slices of temporal bone in 29 patients (17 males and 12 females), whose average age was 38.69 ± 17.81 years. The 3D relationships between the mutual complex structures were displayed graphically and measured. RESULTS The important structures within the temporal bone were displayed in detail. 3D relationships between the structures in the temporal bone, such as the ossicles, facial nerves, labyrinth, and skull base, were quantified. CONCLUSION Quantification of surgically relevant anatomic relationships and the morphology of the supralabyrinthine space in three dimensions are very helpful in surgical dissection.
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Affiliation(s)
- Yusu Ni
- Departments of Otology and Skull Base Surgery, Eye and ENT Hospital of Shanghai Medical School, Fudan University, Shanghai, China
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Cerrolaza JJ, Villanueva A, Cabeza R. Hierarchical statistical shape models of multiobject anatomical structures: application to brain MRI. IEEE TRANSACTIONS ON MEDICAL IMAGING 2012; 31:713-724. [PMID: 22194238 DOI: 10.1109/tmi.2011.2175940] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
The accurate segmentation of subcortical brain structures in magnetic resonance (MR) images is of crucial importance in the interdisciplinary field of medical imaging. Although statistical approaches such as active shape models (ASMs) have proven to be particularly useful in the modeling of multiobject shapes, they are inefficient when facing challenging problems. Based on the wavelet transform, the fully generic multiresolution framework presented in this paper allows us to decompose the interobject relationships into different levels of detail. The aim of this hierarchical decomposition is twofold: to efficiently characterize the relationships between objects and their particular localities. Experiments performed on an eight-object structure defined in axial cross sectional MR brain images show that the new hierarchical segmentation significantly improves the accuracy of the segmentation, and while it exhibits a remarkable robustness with respect to the size of the training set.
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Affiliation(s)
- Juan J Cerrolaza
- Department of Electrical and Electronic Engineering, Public University of Navarra, Pamplona, Spain.
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Hoyte L, Ye W, Brubaker L, Fielding JR, Lockhart ME, Heilbrun ME, Brown MB, Warfield SK. Segmentations of MRI images of the female pelvic floor: a study of inter- and intra-reader reliability. J Magn Reson Imaging 2011; 33:684-91. [PMID: 21563253 DOI: 10.1002/jmri.22478] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
PURPOSE To describe the inter- and intra-operator reliability of segmentations of female pelvic floor structures. MATERIALS AND METHODS Three segmentation specialists were asked to segment out the female pelvic structures in 20 MR datasets on three separate occasions. The STAPLE algorithm was used to compute inter- and intra-segmenter agreement of each organ in each dataset. STAPLE computed the sensitivity, specificity, and positive predictive values (PPV) for inter- and intra-segmenter repeatability. These parameters were analyzed using intra-class correlation analysis. Correlation of organ volume to PPV and sensitivity was also computed. RESULTS Mean PPV of the segmented organs ranged from 0.82 to 0.99, and sensitivity ranged from 33 to 96%. Intra-class correlation ranged from 0.07 to 0.98 across segmenters. Pearson correlation of volume to sensitivity were significant across organs, ranging from 0.54 to 0.91. Organs with significant correlation of PPV to volume were bladder (-0.69), levator ani (-0.68), and coccyx (-0.63). CONCLUSION Undirected manual segmentation of the pelvic floor organs are adequate for locating the organs, but poor at defining structural boundaries.
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Affiliation(s)
- Lennox Hoyte
- University of South Florida, College of Medicine, Division of Urogynecology and Pelvic Reconstructive Surgery, Tampa General Hospital, Urogynecology Division, Tampa, Florida, USA.
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Hodges DA, Hairston WD, Burdette JH. Aspects of Multisensory Perception: The Integration of Visual and Auditory Information in Musical Experiences. Ann N Y Acad Sci 2005; 1060:175-85. [PMID: 16597762 DOI: 10.1196/annals.1360.012] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
One of the requirements for being a successful musical conductor is to be able to locate sounds instantaneously in time and space. Because this requires the integration of auditory and visual information, the purpose of this study was to examine multisensory processing in conductors and a matched set of control subjects. Subjects participated in a series of behavioral tasks, including pitch discrimination, temporal-order judgment (TOJ), and target localization. Additionally, fMRI scans were done on a subset of subjects who performed a multisensory TOJ task. Analyses of behavioral data indicate that, in the auditory realm, conductors were more accurate in both pitch discrimination and TOJs as well as in locating targets in space. Furthermore, these same subjects also demonstrated a benefit from the combination of auditory and visual information that was not observed in control subjects when locating visual targets. Finally, neural substrates in BA 37, 39/40 were identified as potential areas underlying the conductors' superior multisensory TOJs. Data collection and analyses are ongoing and will lead to an improved understanding of multisensory integration in a complex, musical behavior.
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Affiliation(s)
- Donald A Hodges
- Music Research Institute, School of Music, University of North Carolina at Greensboro, P.O. Box 26170, 27402-6170, USA.
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Suri JS, Liu K, Reden L, Laxminarayan S. A review on MR vascular image processing algorithms: acquisition and prefiltering: part I. ACTA ACUST UNITED AC 2004; 6:324-37. [PMID: 15224847 DOI: 10.1109/titb.2002.804139] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Vascular segmentation has recently been given much attention. This review paper has two parts. Part I focuses on the physics of magnetic resonance angiography (MRA) generation and prefiltering techniques applied to MRA data sets. Part II of the review focuses on the vessel segmentation algorithms. The first section of this paper introduces the five different sets of receive coils used with the MRI system for magnetic resonance angiography data acquisition. This section then presents the five different types of the most popular data acquisition techniques: time-of-flight (TOF), phase-contrast, contrast-enhanced, black-blood, T2-weighted, and T2*-weighted, along with their pros and cons. Section II of this paper focuses on prefiltering algorithms for MRA data sets. This is necessary for removing the background nonvascular structures in the MRA data sets. Finally, the paper concludes with a clinical discussion on the challenges and the future of the data acquisition and the automated filtering algorithms.
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Affiliation(s)
- Jasjit S Suri
- Philips Medical Systems, Inc., Cleveland, OH 44143, USA
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Abstract
Medical imaging has been used primarily for diagnosis. In the past 15 years there has been an emergence of the use of images for the guidance of therapy. This process requires three-dimensional localization devices, the ability to register medical images to physical space, and the ability to display position and trajectory on those images. This paper examines the development and state of the art in those processes.
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Affiliation(s)
- R L Galloway
- Department of Biomedical Engineering, Center for Technology Guided Therapy, Vanderbilt University, Nashville, Tennessee 37235, USA.
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Glombitza G, Evers H, Hassfeld S, Engelmann U, Meinzer HP. Virtual surgery in a (tele-)radiology framework. IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE : A PUBLICATION OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY 1999; 3:186-96. [PMID: 10719482 DOI: 10.1109/4233.788580] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
This paper presents telemedicine as an extension of a teleradiology framework through tools for virtual surgery. To classify the described methods and applications, the research field of virtual reality (VR) is broadly reviewed. Differences with respect to technical equipment, methodological requirements and areas of application are pointed out. Desktop VR, augmented reality, and virtual reality are differentiated and discussed in some typical contexts of diagnostic support, surgical planning, therapeutic procedures, simulation and training. Visualization techniques are compared as a prerequisite for virtual reality and assigned to distinct levels of immersion. The advantage of a hybrid visualization kernel is emphasized with respect to the desktop VR applications that are subsequently shown. Moreover, software design aspects are considered by outlining functional openness in the architecture of the host system. Here, a teleradiology workstation was extended by dedicated tools for surgical planning through a plug-in mechanism. Examples of recent areas of application are introduced such as liver tumor resection planning, diagnostic support in heart surgery, and craniofacial surgery planning. In the future, surgical planning systems will become more important. They will benefit from improvements in image acquisition and communication, new image processing approaches, and techniques for data presentation. This will facilitate preoperative planning and intraoperative applications.
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Affiliation(s)
- G Glombitza
- Deutsches Krebsforschungszentrum, Division of Medical and Biological Informatics/H0100, Heidelberg, Germany
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Kaus MR, Warfield SK, Nabavi A, Chatzidakis E, Black PM, Jolesz FA, Kikinis R. Segmentation of Meningiomas and Low Grade Gliomas in MRI. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION – MICCAI’99 1999. [DOI: 10.1007/10704282_1] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Yamashita J, Yamauchi Y, Mochimaru M, Fukui Y, Yokoyama K. Real-time 3-D model-based navigation system for endoscopic paranasal sinus surgery. IEEE Trans Biomed Eng 1999; 46:107-16. [PMID: 9919832 DOI: 10.1109/10.736765] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
This paper presents a three-dimensional (3-D)-model-based navigation system for endoscopic sinus surgery treating paranasal sinusitis. Endoscopic surgery is becoming more common because of its low invasiveness. Its problem with disorientation, however, is one of the toughest barriers for the novice and may lead even an expert to commit serious surgical errors, e.g., causing cerebrospinal fluid (CSF) leakage or blinding the patient. To prevent such complications and optimize training, our system aids in navigation by showing a single perspective view of the patient and the endoscope models. This virtual endoscope has a viewing cone with a simulated light to indicate the viewing direction and visual field in real-time. The system's three clipping planes automatically follow the endoscope and help keep the surgeon aware of the endoscope's actual position. An experiment comparing the system to conventional navigation using a triplanar display showed that the perspective view was referenced very frequently, giving a positive impressions, while the triplanar display was almost completely ignored, apparently because it was too difficult to interpret immediately.
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Affiliation(s)
- J Yamashita
- National Institute of Bioscience and Human-Technology, AIST, MITI, Tsukuba, Japan.
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Ohue S, Kumon Y, Hohno K, Shiraishi M, Sakaki S, Kikuchi K, Miki H. Preoperative neurosurgical Simulation and Intraoperative Navigation using Three-dimensional Images. ACTA ACUST UNITED AC 1999. [DOI: 10.7887/jcns.8.657] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Affiliation(s)
- Shiro Ohue
- Department of Neurological Surgery, Ehime University School of Medicine
| | - Yoshiaki Kumon
- Department of Neurological Surgery, Ehime University School of Medicine
| | - Kanehisa Hohno
- Department of Neurological Surgery, Ehime University School of Medicine
| | | | - Saburo Sakaki
- Department of Neurological Surgery, Ehime University School of Medicine
| | - Keiichi Kikuchi
- Department of Radiology, Ehime University School of Medicine
| | - Hitoshi Miki
- Department of Radiology, Ehime University School of Medicine
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Ozlen F, Nakajima S, Chabrerie A, Leventon ME, Grimson E, Kikinis R, Jolesz F, Black PM. Excision of cortical dysplasia in the language area with use of a surgical navigator: a case report. Epilepsia 1998; 39:1361-6. [PMID: 9860075 DOI: 10.1111/j.1528-1157.1998.tb01338.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
PURPOSE We have developed an intraoperative optical tracking-based navigational system that allows localization in the operative space. Using three-dimensional reconstruction, this system has provided precise spatial information for intraoperative cortical mapping in patients with intractable epilepsy in whom the lesion lies close to eloquent cortex. METHODS A 23-year-old man with intractable complex partial seizures (CPS) presented to our institution. Proton-density magnetic resonance imaging (MRI) showed a 3-cm lesion which lay 2 cm beneath the left frontal operculum. A three-dimensional model of the patient was reconstructed using MR modalities. Intraoperatively, subdural grid and strips were placed over the lesion and their electrodes were registered to the three-dimensional model, which was displayed on a monitor. The navigational system was used to localize each electrode on the three-dimensional model. By the second operation, the sites of seizure activity were established and recorded on the three-dimensional model. A bipolar stimulator was also used to determine the speech area. RESULTS The lesion, which proved to be cortical dysplasia, was removed completely and the cortical speech area was avoided. During the postoperative period, the patient had no neurological symptoms and no seizure activity. CONCLUSIONS The localization of a lesion and its correlation with epileptogenic foci is important in optimizing treatment in patients with cortical dysplasia. Our navigational system provided accurate localization of the lesion and correlation with the epileptogenic focus and related eloquent cortex. We believe that the safe removal of the lesion was facilitated by this system.
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Affiliation(s)
- F Ozlen
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA
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Dean D, Kamath J, Duerk JL, Ganz E. Validation of object-induced MR distortion correction for frameless stereotactic neurosurgery. IEEE TRANSACTIONS ON MEDICAL IMAGING 1998; 17:810-816. [PMID: 9874306 DOI: 10.1109/42.736049] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Spatial fidelity is a paramount issue in image guided neurosurgery. Until recently, three-dimensional computed tomography (3D CT) has been the primary modality because it provides fast volume capture with pixel level (1 mm) accuracy. While three-dimensional magnetic resonance (3D MR) images provide superior anatomic information, published image capture protocols are time consuming and result in scanner- and object-induced magnetic field inhomogeneities which raise inaccuracy above pixel size. Using available scanner calibration software, a volumetric algorithm to correct for object-based geometric distortion, and a Fast Low Angle SHot (FLASH) 3D MR-scan protocol, we were able to reduce mean CT to MR skin-adhesed fiducial marker registration error from 1.36 to 1.09 mm. After dropping the worst one or two of six fiducial markers, mean registration error dropped to 0.62 mm (subpixel accuracy). Three dimensional object-induced error maps present highest 3D MR spatial infidelity at the tissue interfaces (skin/air, scalp/skull) where frameless stereotactic fiducial markers are commonly applied. The algorithm produced similar results in two patient 3D MR-scans.
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Affiliation(s)
- D Dean
- Department of Neurological Surgery, Case Western Reserve University, Cleveland, OH 44106, USA.
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