Are silica defences in grasses driving vole population cycles?

Is the diet cyclic phase-dependent in boreal vole populations?

Herbivorous rodents in boreal, alpine and arctic ecosystems are renowned for their multi-annual population cycles. Researchers have hypothesised that these cycles may result from herbivore-plant interactions in various ways. For instance, if the biomass of preferred food plants is reduced after a peak phase of a cycle, rodent diets can be expected to become dominated by less preferred food plants, leading the population to a crash. It could also be expected that the taxonomic diversity of rodent diets increases from the peak to the crash phase of a cycle. The present study is the first to use DNA metabarcoding to quantify the diets of two functionally important boreal rodent species (bank vole and tundra vole) to assess whether their diet changed systematically in the expected cyclic phase-dependent manner. We found the taxonomic diet spectrum broad in both vole species but with little interspecific overlap. There was no evidence of systematic shifts in diet diversity metrics between the phases of the population cycle in either species. While both species' diet composition changed moderately between cycle phases and seasons, these changes were small compared to other sources of diet variation-especially differences between individuals. Thus, the variation in diet that could be attributed to cyclic phases is marginal relative to the overall diet flexibility. Based on general consumer-resource theory, we suggest that the broad diets with little interspecific overlap render it unlikely that herbivore-plant interactions generate their synchronous population cycles. We propose that determining dietary niche width should be the first step in scientific inquiries about the role of herbivore-plant interactions in cyclic vole populations.

Small rodent population cycles and plants - after 70 years, where do we go?

Small rodent population cycles characterise northern ecosystems, and the cause of these cycles has been a long-lasting central topic in ecology, with trophic interactions currently considered the most plausible cause. While some researchers have rejected plant-herbivore interactions as a cause of rodent cycles, others have continued to research their potential roles. Here, we present an overview of whether plants can cause rodent population cycles, dividing this idea into four different hypotheses with different pathways of plant impacts and related assumptions. Our systematic review of the existing literature identified 238 studies from 150 publications. This evidence base covered studies from the temperate biome to the tundra, but the studies were scattered across study systems and only a few specific topics were addressed in a replicated manner. Quantitative effects of rodents on vegetation was the best studied topic, and our evidence base suggests such that such effects may be most pronounced in winter. However, the regrowth of vegetation appears to take place too rapidly to maintain low rodent population densities over several years. The lack of studies prevented assessment of time lags in the qualitative responses of vegetation to rodent herbivory. We conclude that the literature is currently insufficient to discard with confidence any of the four potential hypotheses for plant-rodent cycles discussed herein. While new methods allow analyses of plant quality across more herbivore-relevant spatial scales than previously possible, we argue that the best way forward to rejecting any of the rodent-plant hypotheses is testing specific predictions of dietary variation. Indeed, all identified hypotheses make explicit assumptions on how rodent diet taxonomic composition and quality will change across the cycle. Passing this bottleneck could help pinpoint where, when, and how plant-herbivore interactions have - or do not have - plausible effects on rodent population dynamics.

Is there silicon in flowers and what does it tell us?

The emergence of flowers marked an important development in plant evolution. Flowers in many species evolved to attract animal pollinators to increase fertilisation chances. In leaves, silicon (Si) discourages herbivores, for example by wearing down mouthparts. Flowers are essentially modified leaves and hence may also have the capacity to accumulate Si. If Si in flowers discourages animal visitors as it does in leaves, Si accumulation may be disadvantageous for pollination. Whether flowers accumulate Si, and what the implications may be, was not known for many species. We analysed leaves and flowers of different taxa, separated into their different anatomical parts. Flowers mostly have low Si concentrations in all parts (mean ± SE of BSi in mg g-1 was 0.22 ± 0.04 in petals, 0.59 ± 0.24 in sepals, 0.14 ± 0.03 in stamens, 0.15 ± 0.04 in styles and stigmas and 0.37 ± 0.19 in ovaries for a subset of 56 species). In most cases, less Si was accumulated in flowers than in leaves (mean ± SE of BSi in mg g-1 was 1.51 ± 0.55 in whole flowers vs. 2.97 ± 0.57 in leaves in 104 species) though intriguing exceptions are found, with some species accumulating more Si in flowers than leaves. The large variation in concentration among flowers across the taxa examined, with a particularly high concentration in grass inflorescences, tantalisingly suggests differences in the use of Si for flowers across plant groups. We conclude that the study of the functions of Si for flowers warrants more attention, with pollination strategy a potential contributing factor.

Induction of silicon defences in wheat landraces is local, not systemic, and driven by mobilization of soluble silicon to damaged leaves

In response to herbivory, many grasses, including crops such as wheat, accumulate significant levels of silicon (Si) as an antiherbivore defence. Damage-induced increases in Si can be localized in damaged leaves or be more systemic, but the mechanisms leading to these differences in Si distribution remain untested. Ten genetically diverse wheat landraces (Triticum aestivum) were used to assess genotypic variation in Si induction in response to mechanical damage and how this was affected by exogenous Si supply. Total and soluble Si levels were measured in damaged and undamaged leaves as well as in the phloem to test how Si was allocated to different parts of the plant after damage. Localized, but not systemic, induction of Si defences occurred, and was more pronounced when plants had supplemental Si. Damaged plants had significant increases in Si concentration in their damaged leaves, while the Si concentration in undamaged leaves decreased, such that there was no difference in the average Si concentration of damaged and undamaged plants. The increased Si in damaged leaves was due to the redirection of soluble Si, present in the phloem, from undamaged to damaged plant parts, potentially a more cost-effective defence mechanism for plants than increased Si uptake.

Is chronic stress a causal mechanism for small mammal population cycles? Reconciling the evidence

Chronic stress has long been hypothesized to play a role in driving population cycles. Christian (1950) hypothesized that high population density results in chronic stress and mass "die-offs" in small mammal populations. Updated variations of this hypothesis propose that chronic stress at high population density may reduce fitness, reproduction, or program aspects of phenotype, driving population declines. We tested the effect of density on the stress axis in meadow voles (Microtus pennsylvanicus) by manipulating population density in field enclosures over three years. Using fecal corticosterone metabolites as a non-invasive measure of glucocorticoid (GC) concentrations, we found that density alone was not associated with GC differences. However, we found that the seasonal relationship of GC levels differed by density treatment, with high-density populations having elevated GC levels early in the breeding season and decreasing towards late summer. We additionally tested hippocampal glucocorticoid receptor and mineralocorticoid receptor gene expression in juvenile voles born at different densities, with the hypothesis that high density may reduce receptor expression, altering negative feedback of the stress axis. We found that females had marginally higher glucocorticoid receptor expression at high density, no effect in males, and no detectable effect of density on mineralocorticoid receptor expression in either sex. Hence, we found no evidence that high density directly impairs negative feedback in the hippocampus, but rather female offspring may be better equipped for negative feedback. We compare our findings with prior studies to attempt to disentangle the complicated relationship between density, seasonality, sex, reproduction and the stress axis.

An experimental analysis of density dependence in meadow voles: Within-season and delayed effects

Wild mammal populations exhibit a variety of dynamics, ranging from fairly stable with little change in population size over time to high-amplitude cyclic or erratic fluctuations. A persistent question in population ecology is why populations fluctuate as they do. Answering this seemingly simple question has proven to be challenging. Broadly, density-dependent feedback mechanisms should allow populations to grow at low density and slow or halt growth at high density. However, experimental tests of what demographic processes result in density-dependent feedback and on what timescale have proven elusive. Here, we used replicated density perturbation experiments and capture-mark-recapture analyses to test density-dependent population growth in populations of meadow voles (Microtus pennsylvanicus) during the summer breeding season by manipulating founding population density and observing the pattern of survival, reproduction, and population growth. High population density had no consistent effect on survival rates but generally negatively influenced recruitment and population growth rates. However, these density-dependent effects varied within the breeding season and across years. Our study provides evidence that density-dependent feedback mechanisms operate at finer time scales than previously believed and that process, additively with delayed year effects, is key to understanding multiyear population demography.

Impact of Silicon on Plant Nutrition and Significance of Silicon Mobilizing Bacteria in Agronomic Practices

Globally, rejuvenation of soil health is a major concern due to the continuous loss of soil fertility and productivity. Soil degradation decreases crop yields and threatens global food security. Improper use of chemical fertilizers coupled with intensive cultivation further reduces both soil health and crop yields. Plants require several nutrients in varying ratios that are essential for the plant to complete a healthy growth and development cycle. Soil, water, and air are the sources of these essential macro- and micro-nutrients needed to complete plant vegetative and reproductive cycles. Among the essential macro-nutrients, nitrogen (N) plays a significant in non-legume species and without sufficient plant access to N lower yields result. While silicon (Si) is the 2nd most abundant element in the Earth’s crust and is the backbone of soil silicate minerals, it is an essential micro-nutrient for some plants. Silicon is just beginning to be recognized as an important micronutrient to some plant species and, while it is quite abundant, Si is often not readily available for plant uptake. The manufacturing cost of synthetic silica-based fertilizers is high, while absorption of silica is quite slow in soil for many plants. Rhizosphere biological weathering processes includes microbial solubilization processes that increase the dissolution of minerals and increases Si availability for plant uptake. Therefore, an important strategy to improve plant silicon uptake could be field application of Si-solubilizing bacteria. In this review, we evaluate the role of Si in seed germination, growth, and morphological development and crop yield under various biotic and abiotic stresses, different pools and fluxes of silicon (Si) in soil, and the bacterial genera of the silicon solubilizing microorganisms. We also elaborate on the detailed mechanisms of Si-solubilizing/mobilizing bacteria involved in silicate dissolution and uptake by a plant in soil. Last, we discuss the potential of silicon and silicon solubilizing/mobilizing to achieve environmentally friendly and sustainable crop production.

Plant-herbivore interactions: Combined effect of groundwater level, root vole grazing, and sedge silicification

Accumulation of silica (Si) by plants can be driven by (1) herbivory pressure (and therefore plant-herbivore interactions), (2) geohydrological cycles, or (3) a combination of (1) and (2), with (1-3) possibly affecting Si concentration with a 1-year delay.To identify the relative significance of (1-3), we analyzed the concentration of Si in fibrous tussock sedge (Carex appropinquata), the population density of the root vole (Microtus oeconomus), and the groundwater level, over 11 years.The largest influence of autumn Si concentration in leaves (Sileaf) was on the level of the current-year groundwater table, which was positive and accounted for 13.3% of its variance. The previous year's vole population density was weakly positively correlated with Sileaf, and it alone explained 9.5% of its variance.The only variable found to have a positive, significant effect on autumn Si concentration in rhizomes (Sirhiz) was the current-year spring water level, explaining as much as 60.9% of its variance.We conclude that the changes in Si concentration in fibrous tussock sedge are predominantly driven by hydrology, with vole population dynamics being secondary.Our results provide only partial support for the existence of plant-herbivore interactions, as we did not detect the significant effects of Si tussock concentration on the vole density dynamics. This was mainly due to the low level of silicification of sedges, which was insufficient to impinge herbivores.Future studies on plant-herbivore interactions should therefore aim at disentangling whether anti-herbivore protection is dependent on threshold values of herbivore population dynamics. Furthermore, studies on Si accumulation should focus on the effect of water-mediated Si availability.

Rodent host population dynamics drive zoonotic Lyme Borreliosis and Orthohantavirus infections in humans in Northern Europe

Zoonotic diseases, caused by pathogens transmitted between other vertebrate animals and humans, pose a major risk to human health. Rodents are important reservoir hosts for many zoonotic pathogens, and rodent population dynamics affect the infection dynamics of rodent-borne diseases, such as diseases caused by hantaviruses. However, the role of rodent population dynamics in determining the infection dynamics of rodent-associated tick-borne diseases, such as Lyme borreliosis (LB), caused by Borrelia burgdorferi sensu lato bacteria, have gained limited attention in Northern Europe, despite the multiannual abundance fluctuations, the so-called vole cycles, that characterise rodent population dynamics in the region. Here, we quantify the associations between rodent abundance and LB human cases and Puumala Orthohantavirus (PUUV) infections by using two time series (25-year and 9-year) in Finland. Both bank vole (Myodes glareolus) abundance as well as LB and PUUV infection incidence in humans showed approximately 3-year cycles. Without vector transmitted PUUV infections followed the bank vole host abundance fluctuations with two-month time lag, whereas tick-transmitted LB was associated with bank vole abundance ca. 12 and 24 months earlier. However, the strength of association between LB incidence and bank vole abundance ca. 12 months before varied over the study years. This study highlights that the human risk to acquire rodent-borne pathogens, as well as rodent-associated tick-borne pathogens is associated with the vole cycles in Northern Fennoscandia, yet with complex time lags.

Silicon in the Soil-Plant Continuum: Intricate Feedback Mechanisms within Ecosystems

Plants' ability to take up silicon from the soil, accumulate it within their tissues and then reincorporate it into the soil through litter creates an intricate network of feedback mechanisms in ecosystems. Here, we provide a concise review of silicon's roles in soil chemistry and physics and in plant physiology and ecology, focusing on the processes that form these feedback mechanisms. Through this review and analysis, we demonstrate how this feedback network drives ecosystem processes and affects ecosystem functioning. Consequently, we show that Si uptake and accumulation by plants is involved in several ecosystem services like soil appropriation, biomass supply, and carbon sequestration. Considering the demand for food of an increasing global population and the challenges of climate change, a detailed understanding of the underlying processes of these ecosystem services is of prime importance. Silicon and its role in ecosystem functioning and services thus should be the main focus of future research.

Low dietary silicon supplementation may not affect bone and cartilage in mature, sedentary horses

As osteoarthritis is a major cause of lameness in horses in the United States, improving collagen health prior to onset and increasing collagen turnover within affected joints could improve health- and welfare-related outcomes. Through its positive effects on bone mineral content and density and its role in increasing collagen synthesis, silicon (Si) may slow the development and progression of osteoarthritis, thereby reducing lameness. This study evaluated the hypothesis that Si supplementation would increase cartilage turnover through increased collagen degradation and formation markers, as well as bone formation markers, resulting in reduced lameness severity when compared with controls. Ten mature Standardbred geldings were assigned to either a Si-treated (SIL) or control (CON) group and group-housed on pasture for 84 d. Horses were individually fed to ensure no cross-contamination of Si other than what was present in the environment. For the duration of the study, SIL horses received a Si-collagen supplement at the rate of 0.3 g supplement/(100 kg body weight day). Serum samples were taken weekly for osteocalcin, and plasma samples were taken on days 0, 42, and 84 for plasma minerals. On days 0, 42, and 84, subjective and objective lameness exams were performed, and radiographs and synovial fluid samples were taken from reference and osteoarthritic joints. Plasma minerals were similar in both groups and were lower on day 84 than on day 0 (P < 0.05). Si supplementation, fed at the manufacturer's recommended rate, did not improve lameness or radiographs when compared with controls, and supplemented horses did not show greater collagen degradation and/or synthesis markers in synovial fluid than controls, indicating that cartilage turnover remained unaffected. However, a minimum beneficial threshold and range for Si supplementation standardized to body weight need to be established.

Silicon Cycling in Soils Revisited

Silicon (Si) speciation and availability in soils is highly important for ecosystem functioning, because Si is a beneficial element for plant growth. Si chemistry is highly complex compared to other elements in soils, because Si reaction rates are relatively slow and dependent on Si species. Consequently, we review the occurrence of different Si species in soil solution and their changes by polymerization, depolymerization, and condensation in relation to important soil processes. We show that an argumentation based on thermodynamic endmembers of Si dependent processes, as currently done, is often difficult, because some reactions such as mineral crystallization require months to years (sometimes even centuries or millennia). Furthermore, we give an overview of Si reactions in soil solution and the predominance of certain solid compounds, which is a neglected but important parameter controlling the availability, reactivity, and function of Si in soils. We further discuss the drivers of soil Si cycling and how humans interfere with these processes. The soil Si cycle is of major importance for ecosystem functioning; therefore, a deeper understanding of drivers of Si cycling (e.g., predominant speciation), human disturbances and the implication for important soil properties (water storage, nutrient availability, and micro aggregate stability) is of fundamental relevance.

Silicon and Plant-Animal Interactions: Towards an Evolutionary Framework

Herbivory is fundamental in ecology, being a major driver of ecosystem structure and functioning. Plant Si and phytoliths play a significant antiherbivory role, the understanding of which and of its evolutionary context will increase our understanding of this phenomenon, its origins, and its significance for past, extant, and future ecosystems. To achieve this goal, we need a superdisciplinary evolutionary framework connecting the role of Si in plant–herbivore interactions, in global processes, and in plant and herbivore evolution. To do this properly, we should acknowledge and incorporate into our work some basic facts that are too often overlooked. First, there is great taxonomic variance both in plant Si contents, forms, and roles, but also in herbivore responses, dietary preferences, and in fossil evidence. Second, species and their traits, as well as whole ecosystems, should be seen in the context of their entire evolutionary history and may therefore reflect not only adaptations to extant selective factors but also anachronistic traits. Third, evolutionary history and evolutionary transitions are complex, resulting in true and apparent asynchronisms. Fourth, evolution and ecology are multiscalar, in which various phenomena and processes act at various scales. Taking these issues into consideration will improve our ability to develop this needed theoretical framework and will bring us closer to gaining a more complete understanding of one of the most exciting and elusive phenomena in plant biology and ecology.

Gathering and Analyzing Surface Parameters for Diet Identification Purposes

Modern surface acquisition devices, such as interferometers and confocal microscopes, make it possible to have accurate three-dimensional (3D) numerical representations of real surfaces. The numerical dental surfaces hold details that are related to the microwear that is caused by food processing. As there are numerous surface parameters that describe surface properties and knowing that a lot more can be built, is it possible to identify the ones that can separate taxa based on their diets? Until now, the candidates were chosen from among those provided by metrology software, which often implements International Organization for Standardization (ISO) parameters. Moreover, the way that a parameter is declared as diet-discriminative differs from one researcher to another. The aim of the present work is to propose a framework to broaden the investigation of relevant parameters and subsequently a procedure that is based on statistical tests to highlight the best of them. Many parameters were tested in a previous study. Here, some were dropped and others added to the classical ones. The resulting set is doubled while considering two derived surfaces: the initial one minus a second order and an eighth order polynomial. The resulting surfaces are then sampled—256 samples per surface—making it possible to build new derived parameters that are based on statistics. The studied dental surfaces belong to seven sets of three or more groups with known differences in diet. In almost all cases, the statistical procedure succeeds in identifying the most relevant parameters to reflect the group differences. Surprisingly, the widely used Area-scale fractal complexity (Asfc) parameter—despite some improvements—cannot differentiate the groups as accurately. The present work can be used as a standalone procedure, but it can also be seen as a first step towards machine learning where a lot of training data is necessary, thus making the human intervention prohibitive.

Population-level manipulations of field vole densities induce subsequent changes in plant quality but no impacts on vole demography

Grazing-induced changes in plant quality have been suggested to drive the negative delayed density dependence exhibited by many herbivore species, but little field evidence exists to support this hypothesis. We tested a key premise of the hypothesis that reciprocal feedback between vole grazing pressure and the induction of anti-herbivore silicon defenses in grasses drives observed population cycles in a large-scale field experiment in northern England. We repeatedly reduced population densities of field voles (Microtus agrestis) on replicated 1-ha grassland plots at Kielder Forest, northern England, over a period of 1 year. Subsequently, we tested for the impact of past density on vole life history traits in spring, and whether these effects were driven by induced silicon defenses in the voles' major over-winter food, the grass Deschampsia caespitosa. After several months of density manipulation, leaf silicon concentrations diverged and averaged 22% lower on sites where vole density had been reduced, but this difference did not persist beyond the period of the density manipulations. There were no significant effects of our density manipulations on vole body mass, spring population growth rate, or mean date for the onset of spring reproduction the following year. These findings show that grazing by field voles does induce increased silicon defenses in grasses at a landscape scale. However, at the vole densities encountered, levels of plant damage appear to be below those needed to induce changes in silicon levels large and persistent enough to affect vole performance, confirming the threshold effects we have previously observed in laboratory-based studies. Our findings do not support the plant quality hypothesis for observed vole population cycles in northern England, at least over the range of vole densities that now prevail here.

Temporal dynamics of the tick Ixodes ricinus in northern Europe: epidemiological implications

Background

Tick-borne pathogens pose an increasing threat to human and veterinary health across the northern hemisphere. While the seasonal activity of ticks is largely determined by climatic conditions, host-population dynamics are also likely to affect tick abundance. Consequently, abundance fluctuations of rodents in northern Europe are expected to be translated into tick dynamics, and can hence potentially affect the circulation of tick-borne pathogens. We quantified and explained the temporal dynamics of the tick Ixodes ricinus in the northernmost part of its European geographical range, by estimating (i) abundance in vegetation and (ii) infestation load in the most common rodent species in the study area, the bank vole Myodes glareolus.

Results

Ixodes ricinus nymphs and adult females, the life stages responsible for the most of tick bites in humans, peaked in May-June and August-September. Larvae and nymphs were simultaneously active in June and abundance of questing larvae and nymphs in the vegetation showed a positive association with bank vole abundance. Moreover, infesting larvae and nymphs were aggregated on bank voles, and the infestation of bank voles with I. ricinus larvae and nymphs was positively associated with bank vole abundance.

Conclusion

Our results indicate early summer and early autumn as periods of increased risk for humans to encounter I. ricinus ticks in boreal urban forests and suggest a 2 years life-cycle for I. ricinus with two cohorts of ticks during the same year. Moreover, we identified a simultaneous activity of larvae and nymphs which allows co-feeding on the rodent host, which in turn supports the transmission of several important zoonotic tick-borne pathogens. Finally, we showed that a high density of the rodent host may enhance the risk that ticks and, potentially, tick-borne pathogens pose to human health.

Electronic supplementary material

The online version of this article (doi:10.1186/s13071-017-2112-x) contains supplementary material, which is available to authorized users.

Silicon-based plant defences, tooth wear and voles

Plant–herbivore interactions are hypothesized to drive vole population cycles through the grazing-induced production of phytoliths in leaves. Phytoliths act as mechanical defences because they deter herbivory and lower growth rates in mammals. However, how phytoliths impair herbivore performance is still unknown. Here, we tested whether the amount of phytoliths changes tooth wear patterns. If confirmed, abrasion from phytoliths could play a role in population crashes. We applied dental microwear texture analysis (DMTA) to laboratory and wild voles. Lab voles were fed two pelleted diets with differing amounts of silicon, which produced similar dental textures. This was most probably due to the loss of food mechanical properties through pelletization and/or the small difference in silicon concentration between diets. Wild voles were trapped in Poland during spring and summer, and every year across a population cycle. In spring, voles feed on silica-rich monocotyledons, while in the summer they also include silica-depleted dicotyledons. This was reflected in the results; the amount of silica therefore leaves a traceable record in the dental microwear texture of voles. Furthermore, voles from different phases of population cycles have different microwear textures. We tentatively propose that these differences result from grazing-induced phytolith concentrations. We hypothesize that the high amount of phytoliths in response to intense grazing in peak years may result in malocclusion and other dental abnormalities, which would explain how these silicon-based plant defences help provoke population crashes. DMTA could then be used to reconstruct vole population dynamics using teeth from pellets or palaeontological material.

Silicon: Potential to Promote Direct and Indirect Effects on Plant Defense Against Arthropod Pests in Agriculture

Silicon has generally not been considered essential for plant growth, although it is well recognized that many plants, particularly Poaceae, have substantial plant tissue concentrations of this element. Recently, however, the International Plant Nutrition Institute [IPNI] (2015), Georgia, USA has listed it as a "beneficial substance". This reflects that numerous studies have now established that silicon may alleviate both biotic and abiotic stress. This paper explores the existing knowledge and recent advances in elucidating the role of silicon in plant defense against biotic stress, particularly against arthropod pests in agriculture and attraction of beneficial insects. Silicon confers resistance to herbivores via two described mechanisms: physical and biochemical/molecular. Until recently, studies have mainly centered on two trophic levels; the herbivore and plant. However, several studies now describe tri-trophic effects involving silicon that operate by attracting predators or parasitoids to plants under herbivore attack. Indeed, it has been demonstrated that silicon-treated, arthropod-attacked plants display increased attractiveness to natural enemies, an effect that was reflected in elevated biological control in the field. The reported relationships between soluble silicon and the jasmonic acid (JA) defense pathway, and JA and herbivore-induced plant volatiles (HIPVs) suggest that soluble silicon may enhance the production of HIPVs. Further, it is feasible that silicon uptake may affect protein expression (or modify proteins structurally) so that they can produce additional, or modify, the HIPV profile of plants. Ultimately, understanding silicon under plant ecological, physiological, biochemical, and molecular contexts will assist in fully elucidating the mechanisms behind silicon and plant response to biotic stress at both the bi- and tri-trophic levels.

Seasonal demography of a cyclic lemming population in the Canadian Arctic

1. The causes of cyclical fluctuations in animal populations remain a controversial topic in ecology. Food limitation and predation are two leading hypotheses to explain small mammal population dynamics in northern environments. We documented the seasonal timing of the decline phases and demographic parameters (survival and reproduction) associated with population changes in lemmings, allowing us to evaluate some predictions from these two hypotheses. 2. We studied the demography of brown lemmings (Lemmus trimucronatus), a species showing 3- to 4-year population cycles in the Canadian Arctic, by combining capture-mark-recapture analysis of summer live-trapping with monitoring of winter nests over a 10-year period. We also examined the effects of some weather variables on survival. 3. We found that population declines after a peak occurred between the summer and winter period and not during the winter. During the summer, population growth was driven by change in survival, but not in fecundity or proportion of juveniles, whereas in winter population growth was driven by changes in late summer and winter reproduction. 4. We did not find evidence for direct density dependence on summer demographic parameters, though our analysis was constrained by the paucity of data during the low phase. Body mass, however, was highest in peak years. 5. Weather effects were detected only in early summer when lemming survival was positively related to snow depth at the onset of melt but negatively related to rainfall. 6. Our results show that high mortality causes population declines of lemmings during summer and fall, which suggests that predation is sufficient to cause population crashes, whereas high winter fecundity is the primary factor leading to population irruptions. The positive association between snow depth and early summer survival may be due to the protective cover offered by snow against predators. It is still unclear why reproduction remains low during the low phase.

Quantifying the past and future impact of climate on outbreak patterns of bank voles (Myodes glareolus)

BACKGROUND

Central European outbreak populations of the bank vole (Myodes glareolus Schreber) are known to cause damage in forestry and to transmit the most common type of Hantavirus (Puumala virus, PUUV) to humans. A sound estimation of potential effects of future climate scenarios on population dynamics is a prerequisite for long-term management strategies. Historic abundance time series were used to identify the key weather conditions associated with bank vole abundance, and were extrapolated to future climate scenarios to derive potential long-term changes in bank vole abundance dynamics.

RESULTS

Classification and regression tree analysis revealed the most relevant weather parameters associated with high and low bank vole abundances. Summer temperatures 2 years prior to trapping had the highest impact on abundance fluctuation. Extrapolation of the identified parameters to future climate conditions revealed an increase in years with high vole abundance.

CONCLUSION

Key weather patterns associated with vole abundance reflect the importance of superabundant food supply through masting to the occurrence of bank vole outbreaks. Owing to changing climate, these outbreaks are predicted potentially to increase in frequency 3-4-fold by the end of this century. This may negatively affect damage patterns in forestry and the risk of human PUUV infection in the long term.

Defending the leaf surface: intra- and inter-specific differences in silicon deposition in grasses in response to damage and silicon supply

Understanding interactions between grasses and their herbivores is central to the conservation of species-rich grasslands and the protection of our most important crops against pests. Grasses employ a range of defenses against their natural enemies; silicon-based defenses have been shown to be one of the most effective. Silicon (Si) is laid down on the leaf surface as spines and other sharp bodies, known as phytoliths, making grasses abrasive and their foliage indigestible to herbivores. Previous studies on Si defenses found that closely related species may have similar levels of Si in the leaves but differ markedly in abrasiveness. Here we show how the number, shape and distribution of Si-rich phytoliths and spines differ within and between different grass species and demonstrate that species also differ in their ability to change the deposition and distribution of these defenses in response to damage or increases in Si supply. Specifically, we tested the response of two genotypes of Festuca arundinacea known to differ in their surface texture and three different grass species (F. ovina, F. rubra, and Deschampsia cespitosa) differing in their abrasiveness to combined manipulation of leaf damage and Si supply. F. arundinacea plants with a harsh leaf surface had higher Si content and more spines on their leaf surface than soft varieties. F. ovina and D. cespitosa plants increased their leaf Si concentration and produced an increase in the number of leaf spines and phytoliths on the leaf surface in response to Si addition. F rubra also increased leaf Si content in response to treatments, particularly in damaged leaves, but did not deposit this in the form of spines or increased densities of phytoliths. We discuss how the form in which grasses deposit Si may affect their anti-herbivore characteristics and consider the ecological and agricultural implications of the differences in allocation to Si-based defenses between grass species.

Silicon, endophytes and secondary metabolites as grass defenses against mammalian herbivores

Grasses have been considered to primarily employ tolerance in lieu of defense in mitigating damage caused by herbivory. Yet a number of mechanisms have been identified in grasses, which may deter feeding by grazers. These include enhanced silicon uptake, hosting of toxin-producing endophytic fungi and induction of secondary metabolites. While these mechanisms have been individually studied, their synergistic responses to grazing, as well as their effects on grazers, are poorly known. A field experiment was carried out in 5 × 5 m outdoor enclosures to quantify phytochemical changes of either endophyte-infected (E+) or endophyte-free (E-) meadow fescue (Schedonorus pratensis) in response to medium intensity (corresponding with densities of ca. 1200 voles/ha for 5 weeks during 3 months) or heavy intensity (ca. 1200 voles/ha for 8 weeks during 3 months) grazing by a mammalian herbivore, the field vole (Microtus agrestis). A laboratory experiment was then conducted to evaluate the effects of endophyte infection status and grazing history of the grass diet on vole performance. As predicted, grazing increased foliar silicon content, by up to 13%. Grazing also increased foliar levels of phosphorous and several phenolic compounds, most notably those of the flavonols isorhamnetin-diglycoside and rhamnetin derivative. Silicon concentrations were consistently circa 16% higher in E+ grasses than in E-grasses, at all levels of grazing. Similarly, concentrations of chlorogenic acid derivative were found to be consistently higher in E+ than in E- grasses. Female voles maintained on heavily grazed grasses suffered higher mortality rates in the laboratory than female voles fed ungrazed grass, regardless of endophyte infection status. Our results conclusively demonstrate that, in addition to tolerance, grasses employ multi-tiered, effective defenses against mammalian grazers.

Common vole (Microtus arvalis) ecology and management: implications for risk assessment of plant protection products

Common voles (Microtus arvalis) are common small mammals in some European landscapes. They can be a major rodent pest in European agriculture and they are also a representative generic focal small herbivorous mammal species used in risk assessment for plant protection products. In this paper, common vole population dynamics, habitat and food preferences, pest potential and use of the common vole as a model small wild mammal species in the risk assessment process are reviewed. Common voles are a component of agroecosystems in many parts of Europe, inhabiting agricultural areas (secondary habitats) when the carrying capacity of primary grassland habitats is exceeded. Colonisation of secondary habitats occurs during multiannual outbreaks, when population sizes can exceed 1000 individuals ha(-1) . In such cases, in-crop common vole population control management has been practised to avoid significant crop damage. The species' status as a crop pest, high fecundity, resilience to disturbance and intermittent colonisation of crop habitats are important characteristics that should be reflected in risk assessment. Based on the information provided in the scientific literature, it seems justified to modify elements of the current risk assessment scheme for plant protection products, including the use of realistic food intake rates, reduced assessment factors or the use of alternativee focal rodent species in particular European regions. Some of these adjustments are already being applied in some EU member states. Therefore, it seems reasonable consistently to apply such pragmatic and realistic approaches in risk assessments for plant protection products across the EU.

Sources of variation in small rodent trophic niche: new insights from DNA metabarcoding and stable isotope analysis

Intraspecific competition for food is expected to increase the trophic niche width of consumers, defined here as their diet diversity, but this process has been little studied in herbivores. Population densities of small rodents fluctuate greatly, providing a good study model to evaluate effects of competition on trophic niche. We studied resource use in five arctic small rodent populations of four species combining DNA metabarcoding of stomach contents and stable isotope analysis (SIA). Our results suggest that for small rodents, the most pronounced effect of competition on trophic niche is due to increased use of secondary habitats and to habitat-specific diets, rather than an expansion of trophic niche in primary habitat. DNA metabarcoding and SIA provided complementary information about the composition and temporal variation of herbivore diets. Combing these two approaches requires caution, as the underlying processes causing observed patterns may differ between methodologies due to different spatiotemporal scales.

Physiological and ecological significance of biomineralization in plants

Biomineralization is widespread in the plant kingdom. The most common types of biominerals in plants are calcium oxalate crystals, calcium carbonate, and silica. Functions of biominerals may depend on their shape, size, abundance, placement, and chemical composition. In this review we highlight advances in understanding physiological and ecological significance of biomineralization in plants. We focus on the functions of biomineralization in regulating cytoplasmic free calcium levels, detoxifying aluminum and heavy metals, light gathering and scattering to optimize photosynthesis, aiding in pollen release, germination, and tube growth, the roles it plays in herbivore deterrence, biogeochemical cycling of carbon, calcium, and silicon, and sequestering atmospheric CO2.

Effect of abrasive properties of sedges on intestinal absorptive surface and Resting Metabolic Rate of the root voles

Recent studies on grasses and sedges suggested that the induction of a mechanism reducing digestibility of plant tissues in response to herbivore damage may drive rodent population cycles. This defence mechanism seems to rely on the abrasive properties of ingested plants. However, the underlying mechanism has not been demonstrated in small wild herbivores. Therefore, we carried out an experiment in which we determined the joint effect of abrasive sedge components on histological structure of small intestine as well as Resting Metabolic Rates (RMR) of the root voles (Microtus oeconomus). The histological examination revealed that voles fed with a sedge-dominated diet had shorter villi composed from narrower enterocytes in duodenum, jejunum and ileum. Reduction in the height of villi decreased along the small intestine. Activity of the mucus secretion increased along the small intestine and was significantly higher in ileum. The intestinal abrasion exceeded compensatory capabilities of voles, which responded to sedge-dominated diet by the reduction of body mass and a concomitant decrease in whole body RMR. These results explain an inverse association between body mass and the probability of winter survival observed in voles inhabiting homogenous sedge wetlands.

Differences in vole preference, secondary chemistry and nutrient levels between naturally regenerated and planted Norway spruce seedlings

Field voles (Microtus agrestis) cause severe damage to young Norway spruce (Picea abies) plantations during wintertime in Fennoscandia. We experimentally investigated vole preference for winter-dormant, naturally regenerated seedlings; spring-planted seedlings; or autumn-planted seedlings; and how preference corresponds with seedling chemistry. Voles showed the highest preference for autumn-planted seedlings and the second highest for spring-planted seedlings, while naturally regenerated seedlings were avoided. The stems of the autumn-planted seedlings contained higher concentrations of nitrogen and piperidine alkaloids and lower concentrations of stilbenes than did the other groups. In addition to differences between naturally regenerated and planted seedlings, we investigated seasonal differences in naturally regenerated P. abies needle and bark secondary chemistry. While piperidine alkaloid concentrations did not vary with season, the soluble non-tannin phenolics of needles and the condensed tannins of bark were lower in May than in November or January. At the time of planting, the concentration of bark piperidine alkaloids was higher in autumn-planted than in spring-planted seedlings. We detected two alkaloids not previously found in P. abies, 2-methyl-6-propyl-1,6-piperideine and a tentatively identified pinidine-isomer. Our results demonstrate that vole choice of spruce seedlings is promoted by high nitrogen and low stilbene content, both associated with seedlings planted late in the season. As vole damage is linked to seedling chemistry, damage potentially could be mitigated by advancing planting or by manipulating plant chemistry in nurseries.

Integration of vole management in boreal silvicultural practices

Voles of the genera Microtus and Myodes are widespread and among the most abundant of small mammal species in the boreal zone of the Northern Hemisphere. They are keystone herbivore species in northern ecosystems, and they have profound impacts on both higher and lower trophic levels. Voles are also major silvicultural pests, damaging millions of tree seedlings in years of peak abundance. Prevention of vole damage to silviculture has proven to be very difficult owing to the ubiquity of both suitable vole habitat and potential damage sites across landscapes. The degree of damage inflicted by voles on seedling stands is largely, but not solely, determined by prevailing vole densities, which often fluctuate in 3-4 year population cycles. Silvicultural practices related to site habitat manipulation and/or choice and rearing of seedling material may also greatly influence the severity of vole damage to seedlings. The manipulation of these practices is currently at the forefront of methods potentially applicable to control vole damage in boreal forests. This paper reviews current evidence for the efficacy and present recommendations for further development and application of these methods to mitigate vole damage to seedling stands in boreal silviculture.

Mast pulses shape trophic interactions between fluctuating rodent populations in a primeval forest

How different functional responses of consumers exploiting pulsed resources affect community dynamics is an ongoing question in ecology. Tree masting is a common resource pulse in terrestrial ecosystems that can drive rodent population cycles. Using stable isotope (δ¹³C, δ¹⁵N) analyses, we investigated the dietary response of two fluctuating rodent species, the yellow-necked mouse Apodemus flavicollis and the bank vole Myodes glareolus, to mast events in Białowieża Forest (NE Poland). Rodent hair samples were obtained non-invasively from faeces of their predators for an 11-year period that encompassed two mast events. Spectacular seed crops of deciduous trees, namely oak Quercus robur and hornbeam Carpinus betulus, occur after several intermediate years of moderate seed production, with a post-mast year characterised by a nil crop. While a Bayesian isotopic (SIAR) mixing model showed a variety of potential vegetation inputs to rodent diets, the isotopic niche of the yellow-necked mouse was strongly associated with mast of deciduous trees (>80% of diet), showing no variation among years of different seed crop. However, bank voles showed a strong functional response; in mast years the vole shifted its diet from herbs in deciduous forest (∼66% of diet) to mast (∼74%). Only in mast years did the isotopic niche of both rodent species overlap. Previous research showed that bank voles, subordinate and more generalist than mice, showed higher fluctuations in numbers in response to masting. This study provides unique data on the functional response of key pulse consumers in forest food webs, and contributes to our understanding of rodent population fluctuations and the mechanisms governing pulse–consumer interactions.

Maintenance of genetic diversity in cyclic populations-a longitudinal analysis in Myodes glareolus

Conspicuous cyclic changes in population density characterize many populations of small northern rodents. The extreme crashes in individual number are expected to reduce the amount of genetic variation within a population during the crash phases of the population cycle. By long-term monitoring of a bank vole (Myodes glareolus) population, we show that despite the substantial and repetitive crashes in the population size, high heterozygosity is maintained throughout the population cycle. The striking population density fluctuation in fact only slightly reduced the allelic richness of the population during the crash phases. Effective population sizes of vole populations remained also relatively high even during the crash phases. We further evaluated potential mechanisms contributing to the genetic diversity of the population and found that the peak phases are characterized by both a change in spatial pattern of individuals and a rapid accession of new alleles probably due to migration. We propose that these events act together in maintaining the high genetic diversity within cyclical populations.

Delayed induced silica defences in grasses and their potential for destabilising herbivore population dynamics

Some grass species mount a defensive response to grazing by increasing their rate of uptake of silica from the soil and depositing it as abrasive granules in their leaves. Increased plant silica levels reduce food quality for herbivores that feed on these grasses. Here we provide empirical evidence that a principal food species of an herbivorous rodent exhibits a delayed defensive response to grazing by increasing silica concentrations, and present theoretical modelling that predicts that such a response alone could lead to the population cycles observed in some herbivore populations. Experiments performed under greenhouse conditions revealed that the rate of deposition of silica defences in the grass Deschampsia caespitosa is a time-lagged, nonlinear function of grazing intensity and that, upon cessation of grazing, these defences take around one year to decay to within 5 % of control levels. Simple coupled grass-herbivore population models incorporating this functional response, and parameterised with empirical data, consistently predict population cycles for a wide range of realistic parameter values for a (Microtus) vole-grass system. Our results support the hypothesis that induced silica defences have the potential to strongly affect the population dynamics of their herbivores. Specifically, the feedback response we observed could be a driving mechanism behind the observed population cycles in graminivorous herbivores in cases where grazing levels in the field become sufficiently large and sustained to trigger an induced silica defence response.

Cyclic voles and shrews and non-cyclic mice in a marginal grassland within European temperate forest

Cyclic population dynamics of small mammals are not restricted to the boreal and arctic zones of Eurasia and North America, but long-term data series from lower latitudes are still less common. We demonstrated here the presence of periodic oscillations in small mammal populations in eastern Poland using 22-year (1986–2007) trapping data from marginal meadow and river valley grasslands located in the extensive temperate woodland of Białowieża Primeval Forest. The two most common species inhabiting meadows and river valleys, root vole Microtus oeconomus and common shrew Sorex araneus, exhibited synchronous periodic changes, characterised by a 3-year time lag as indicated by an autocorrelation function. Moreover, the cycles of these two species were synchronous within both habitats. Population dynamics of the striped field mouse Apodemus agrarius was not cyclic. However, this species regularly reached maximum density 1 year before the synchronized peak of root voles and common shrews, which may suggest the existence of interspecific competition. Dynamics of all three species was dominated by direct density-dependent process, whereas delayed density dependent feedback was significant only in the root vole and common shrew. Climatic factors acting in winter and spring (affecting mainly survival and initial reproduction rates) were more important than those acting in summer and autumn and affected significantly only the common shrew. High temperatures in winter and spring had positive effects on autumn-to-autumn changes in abundance of this species, whereas deep snow in combination with high rainfall in spring negatively affected population increase rates in common shrew.

Calcium and silicon mineralization in land plants: transport, structure and function

Plant biomineralization involves calcium and silicon transport and mineralization. Respective analytical methods and case studies are listed. Calcium carbonate is deposited in cystoliths, calcium oxalate in idioblasts. Silicon is deposited in phytoliths. Biomineralization is a coordinated process.

Is plant ecology more siliceous than we realise?

Although silicon occurs in all plants, it is an element that is largely overlooked by many plant ecologists and most plant-related research on silicon comes from agronomy, archaeology, palaeontology and biogeochemistry. Plant silicon has many functions, acting biochemically as silicic acid and physically as amorphous silica. It contributes to cell and plant strength and enables plants to respond adaptively to environmental stresses. Consequently, plant silicon can increase plant fitness in many fundamental aspects of ecology, including plant-herbivore interactions, light interception, pathogen resistance and alleviation of abiotic stresses. Here, we provide an ecological perspective to research outcomes from diverse disciplines, showing that silicon is an important element in plant ecology that is worthy of greater attention.