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Cowan G, MacFarlane S, Torrance L. A new simple and effective method for PLRV infection to screen for virus resistance in potato. J Virol Methods 2023; 315:114691. [PMID: 36787852 DOI: 10.1016/j.jviromet.2023.114691] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 02/02/2023] [Accepted: 02/10/2023] [Indexed: 02/16/2023]
Abstract
Effective screening of plant germplasm collections for resistance to plant viruses requires that there is a rapid and efficient system in place to challenge individual plants with the virus. Potato leafroll virus (PLRV), a commercially important pathogen of potato, is able naturally to infect only the phloem-associated tissue of plants and is delivered to this tissue by feeding aphids. Mechanical (non-vector-mediated) infection by PLRV does not occur thus screening for PLRV resistance is currently laborious and time consuming. We constructed an infectious cDNA clone of a new (Hutton) isolate of PLRV in the binary vector pDIVA and transformed it into Agrobacterium tumefaciens strain LBA4404. Infiltration of this culture into leaves of Nicotiana benthamiana, a highly susceptible model plant, produced a systemic infection with PLRV, although this approach was not successful for potato. However, a very efficient and reproducible systemic infection of potato was achieved when we submerged cut stems of the plant into the agrobacterium cell suspension and then transplanted the stems into compost to grow roots and new apical leaves. Using a standardised protocol developed for this new PLRV inoculation method we have confirmed the previously described resistance to the virus in the JHI breeding line G8107(1) and identified 62 plant accessions from the Commonwealth Potato Collection in which no PLRV infection was detected.
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Affiliation(s)
- Graham Cowan
- Cell and Molecular Sciences Dept., The James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland.
| | - Stuart MacFarlane
- Cell and Molecular Sciences Dept., The James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland
| | - Lesley Torrance
- Cell and Molecular Sciences Dept., The James Hutton Institute, Invergowrie, Dundee DD2 5DA, Scotland
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2
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Xu Y, Da Silva WL, Qian Y, Gray SM. An aromatic amino acid and associated helix in the C-terminus of the potato leafroll virus minor capsid protein regulate systemic infection and symptom expression. PLoS Pathog 2018; 14:e1007451. [PMID: 30440046 PMCID: PMC6264904 DOI: 10.1371/journal.ppat.1007451] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2018] [Revised: 11/29/2018] [Accepted: 11/01/2018] [Indexed: 12/26/2022] Open
Abstract
The C-terminal region of the minor structural protein of potato leafroll virus (PLRV), known as the readthrough protein (RTP), is involved in efficient virus movement, tissue tropism and symptom development. Analysis of numerous C-terminal deletions identified a five-amino acid motif that is required for RTP function. A PLRV mutant expressing RTP with these five amino acids deleted (Δ5aa-RTP) was compromised in systemic infection and symptom expression. Although the Δ5aa-RTP mutant was able to move long distance, limited infection foci were observed in systemically infected leaves suggesting that these five amino acids regulate virus phloem loading in the inoculated leaves and/or unloading into the systemically infected tissues. The 5aa deletion did not alter the efficiency of RTP translation, nor impair RTP self-interaction or its interaction with P17, the virus movement protein. However, the deletion did alter the subcellular localization of RTP. When co-expressed with a PLRV infectious clone, a GFP tagged wild-type RTP was localized to discontinuous punctate spots along the cell periphery and was associated with plasmodesmata, although localization was dependent upon the developmental stage of the plant tissue. In contrast, the Δ5aa-RTP-GFP aggregated in the cytoplasm. Structural modeling indicated that the 5aa deletion would be expected to perturb an α-helix motif. Two of 30 plants infected with Δ5aa-RTP developed a wild-type virus infection phenotype ten weeks post-inoculation. Analysis of the virus population in these plants by deep sequencing identified a duplication of sequences adjacent to the deletion that were predicted to restore the α-helix motif. The subcellular distribution of the RTP is regulated by the 5-aa motif which is under strong selection pressure and in turn contributes to the efficient long distance movement of the virus and the induction of systemic symptoms.
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Affiliation(s)
- Yi Xu
- Section of Plant Pathology and Plant-Microbe Biology, School of Integrated Plant Science, Cornell University, Ithaca, NY, United States of America
| | - Washington Luis Da Silva
- Section of Plant Pathology and Plant-Microbe Biology, School of Integrated Plant Science, Cornell University, Ithaca, NY, United States of America
| | - Yajuan Qian
- Institute of Biotechnology, Zhejiang University, Hangzhou, China
| | - Stewart M. Gray
- Section of Plant Pathology and Plant-Microbe Biology, School of Integrated Plant Science, Cornell University, Ithaca, NY, United States of America
- Emerging Pest and Pathogens Research Unit, USDA, ARS, Ithaca, NY, United States of America
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3
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Bortolamiol-Bécet D, Monsion B, Chapuis S, Hleibieh K, Scheidecker D, Alioua A, Bogaert F, Revers F, Brault V, Ziegler-Graff V. Phloem-Triggered Virus-Induced Gene Silencing Using a Recombinant Polerovirus. Front Microbiol 2018; 9:2449. [PMID: 30405546 PMCID: PMC6206295 DOI: 10.3389/fmicb.2018.02449] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Accepted: 09/25/2018] [Indexed: 01/22/2023] Open
Abstract
The phloem-limited poleroviruses infect Arabidopsis thaliana without causing noticeable disease symptoms. In order to facilitate visual infection identification, we developed virus-induced gene silencing (VIGS) vectors derived from Turnip yellows virus (TuYV). Short sequences from the host gene AtCHLI1 required for chlorophyll biosynthesis [42 nucleotides in sense or antisense orientation or as an inverted-repeat (IR), or an 81 nucleotide sense fragment] were inserted into the 3' non-coding region of the TuYV genome to screen for the most efficient and robust silencing vector. All recombinant viruses produced a clear vein chlorosis phenotype on infected Arabidopsis plants due to the expression inhibition of the AtCHLI1 gene. The introduction of a sense-oriented sequence into TuYV genome resulted in a virus exhibiting a more sustainable chlorosis than the virus containing an IR of the same length. This observation was correlated with a higher stability of the sense sequence insertion in the viral genome. In order to evaluate the impact of the TuYV silencing suppressor P0 in the VIGS mechanism a P0 knock-out mutation was introduced into the recombinant TuYV viruses. They induced a similar but milder vein clearing phenotype due to lower viral accumulation. This indicates that P0 does not hinder the performances of the TuYV silencing effect and confirms that in the viral infection context, P0 has no major impact on the production, propagation and action of the short distance silencing signal in phloem cells. Finally, we showed that TuYV can be used to strongly silence the phloem specific AtRTM1 gene. The TuYV-derived VIGS vectors therefore represent powerful tools to easily detect and monitor TuYV in infected plants and conduct functional analysis of phloem-restricted genes. Moreover this example indicates the potential of poleroviruses for use in functional genomic studies of agronomic plants.
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Affiliation(s)
- Diane Bortolamiol-Bécet
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France.,Architecture et Réactivité de l'ARN, Institut de biologie moléculaire et cellulaire CNRS-UPR 9002, Université de Strasbourg, Strasbourg, France
| | - Baptiste Monsion
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France.,UMR1161 Virologie, INRA, ANSES, Ecole Nationale Vétérinaire d'Alfort, Maisons-Alfort, France
| | - Sophie Chapuis
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France
| | - Kamal Hleibieh
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France
| | - Danièle Scheidecker
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France
| | - Abdelmalek Alioua
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France
| | - Florent Bogaert
- SVQV, INRA UMR 1131, Université de Strasbourg, Colmar, France
| | - Frédéric Revers
- BFP, INRA UMR 1332, Univ. Bordeaux, Villenave d'Ornon, France.,BIOGECO, INRA UMR 1202, Univ. Bordeaux, Pessac, France
| | | | - Véronique Ziegler-Graff
- Institut de biologie moléculaire des plantes, CNRS-UPR 2357, Université de Strasbourg, Strasbourg, France
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4
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Boissinot S, Pichon E, Sorin C, Piccini C, Scheidecker D, Ziegler-Graff V, Brault V. Systemic Propagation of a Fluorescent Infectious Clone of a Polerovirus Following Inoculation by Agrobacteria and Aphids. Viruses 2017; 9:E166. [PMID: 28661469 PMCID: PMC5537658 DOI: 10.3390/v9070166] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Revised: 06/16/2017] [Accepted: 06/22/2017] [Indexed: 11/16/2022] Open
Abstract
A fluorescent viral clone of the polerovirus Turnip yellows virus (TuYV) was engineered by introducing the Enhanced Green Fluorescent Protein (EGFP) sequence into the non-structural domain sequence of the readthrough protein, a minor capsid protein. The resulting recombinant virus, referred to as TuYV-RTGFP, was infectious in several plant species when delivered by agroinoculation and invaded efficiently non-inoculated leaves. As expected for poleroviruses, which infect only phloem cells, the fluorescence emitted by TuYV-RTGFP was restricted to the vasculature of infected plants. In addition, TuYV-RTGFP was aphid transmissible and enabled the observation of the initial sites of infection in the phloem after aphid probing in epidermal cells. The aphid-transmitted virus moved efficiently to leaves distant from the inoculation sites and importantly retained the EGFP sequence in the viral genome. This work reports on the first engineered member in the Luteoviridae family that can be visualized by fluorescence emission in systemic leaves of different plant species after agroinoculation or aphid transmission.
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Affiliation(s)
- Sylvaine Boissinot
- Université de Strasbourg, Institut National de la Recherche Agronomique, SVQV UMR-A 1131, 68000 Colmar, France.
| | - Elodie Pichon
- Université de Strasbourg, Institut National de la Recherche Agronomique, SVQV UMR-A 1131, 68000 Colmar, France.
- UMR 385 BGPI, Institut National de la Recherche Agronomique-Centre de Coopération Internationale en Recherche Agronomique pour le Développement, SupAgro, CIRAD TA-A54/K, Campus International de Baillarguet, 34398 Montpellier, France.
| | - Céline Sorin
- Institut de Biologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, UPR 2357, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France.
- Institute of Plant Science Paris Saclay (IPS2), CNRS, INRA, University Paris Diderot, University of Paris-Saclay, 91405 Orsay, France.
| | - Céline Piccini
- Institut de Biologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, UPR 2357, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France.
| | - Danièle Scheidecker
- Institut de Biologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, UPR 2357, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France.
| | - Véronique Ziegler-Graff
- Institut de Biologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, UPR 2357, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France.
| | - Véronique Brault
- Université de Strasbourg, Institut National de la Recherche Agronomique, SVQV UMR-A 1131, 68000 Colmar, France.
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5
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Krenz B, Bronikowski A, Lu X, Ziebell H, Thompson JR, Perry KL. Visual monitoring of Cucumber mosaic virus infection in Nicotiana benthamiana following transmission by the aphid vector Myzus persicae. J Gen Virol 2015; 96:2904-2912. [PMID: 25979730 DOI: 10.1099/vir.0.000185] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The single-stranded, positive-sense and tripartite RNA virus Cucumber mosaic virus (CMV) was used in this study as a method for monitoring the initial stages of virus infection following aphid transmission. The RNA2 of CMV was modified to incorporate, in a variety of arrangements, an open reading frame (ORF) encoding an enhanced green fluorescent protein (eGFP). The phenotypes of five engineered RNA2s were tested in Nicotiana tabacum, Nicotiana clevelandii and Nicotiana benthamiana. Only one construct (F4), in which the 2b ORF was truncated at the 3' end and fused in-frame with the eGFP ORF, was able to systemically infect N. benthamiana plants, express eGFP and be transmitted by the aphid Myzus persicae. The utility of this construct was demonstrated following infection as early as one day post-transmission (dpt) continuing through to systemic infection. Comparisons of the inoculation sites in different petiole sections one to three dpt clearly showed that the onset of infection and eGFP expression always occurred in the epidermal or collenchymatous tissue just below the epidermis; an observation consistent with the rapid time frame characteristic of the non-persistent mode of aphid transmission.
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Affiliation(s)
- Bjoern Krenz
- Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, 334 Plant Science Building, Ithaca, NY 14853-5904, USA
- Lehrstuhl Biochemie, Department Biologie - Universität Erlangen-Nürnberg, Staudtstrasse 5, 91058 Erlangen, Germany
| | - Agathe Bronikowski
- Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, 334 Plant Science Building, Ithaca, NY 14853-5904, USA
- Institute for Microbiology, Universität Stuttgart, Allmandring 31, 70569 Stuttgart, Germany
| | - Xiaoyun Lu
- Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, 334 Plant Science Building, Ithaca, NY 14853-5904, USA
| | - Heiko Ziebell
- Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, 334 Plant Science Building, Ithaca, NY 14853-5904, USA
- Julius Kühn-Institut Institute for Epidemiology and Pathogen Diagnostics, Messeweg 11/12, 38104 Braunschweig, Germany
| | - Jeremy R Thompson
- Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, 334 Plant Science Building, Ithaca, NY 14853-5904, USA
| | - Keith L Perry
- Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, 334 Plant Science Building, Ithaca, NY 14853-5904, USA
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6
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Chung BN, Yoon JY, Palukaitis P. Engineered resistance in potato against potato leafroll virus, potato virus A and potato virus Y. Virus Genes 2013; 47:86-92. [PMID: 23526159 DOI: 10.1007/s11262-013-0904-4] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2013] [Accepted: 03/13/2013] [Indexed: 11/28/2022]
Abstract
Transgenic potato plants of Solanum tuberosum cultivar Vales Sovereign were generated that expressed fused, tandem, 200 bp segments derived from the capsid protein coding sequences of potato virus Y (PVY strain O) and potato leafroll virus (PLRV), as well as the cylindrical inclusion body coding sequences of potato virus A (PVA), as inverted repeat double-stranded RNAs, separated by an intron. The orientation of the expressed double-stranded RNAs was either sense-intron-antisense or antisense-intron-sense RNAs, and the double-stranded RNAs were processed into small RNAs. Four lines of such transgenic potato plants were assessed for resistance to infection by PVY-O, PLRV, or PVA, all transmitted by a natural vector, the green-peach aphid, Myzus persicae. Resistance was assessed by the absence of detectable virus accumulation in the foliage. All four transgenic potato lines tested showed 100% resistance to infection by either PVY-O or PVA, but variable resistance to infection by PLRV, ranging from 72 to 96% in different lines. This was regardless of the orientation of the viral inserts in the construct used to generate the transgenic plants and the gene copy number of the transgene. This demonstrates the potential for using tandem, fused viral segments and the inverted-repeat expression system to achieve multiple virus resistance to viruses transmitted by aphids in potato.
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Affiliation(s)
- Bong Nam Chung
- National Institute of Horticultural and Herbal Science, Rural Development Administration, Suwon 440-310, Republic of Korea
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7
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Chen AYS, Pavitrin A, Ng JCK. Agroinoculation of the cloned infectious cDNAs of Lettuce chlorosis virus results in systemic plant infection and production of whitefly transmissible virions. Virus Res 2012; 169:310-5. [PMID: 22926259 DOI: 10.1016/j.virusres.2012.08.010] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2012] [Revised: 08/04/2012] [Accepted: 08/09/2012] [Indexed: 11/26/2022]
Abstract
Lettuce chlorosis virus (LCV) is a single stranded, positive strand RNA virus that is solely transmitted by specific whitefly vectors (Bemisia tabaci biotypes A and B) but not by mechanical leaf-rub inoculation. The roles of viral encoded proteins involved in the infection cycle of LCV have not yet been characterized due to the lack of reverse genetic tools. We present here a report of the successful development of an Agrobacterium-mediated inoculation system for the cloned cDNA constructs of LCV. The cDNAs of both LCV RNAs 1 and 2 were engineered into binary vectors in which the expression of LCV RNAs was regulated under a Cauliflower mosaic virus (CaMV) 35S promoter. In addition, by engineering the sequence elements of the Hepatitis delta virus ribozyme and the nopaline synthase 3' untranslated region immediately downstream of the last nucleotide of LCV RNAs 1 and 2 in the binary vector constructs, the in planta produced LCV transcripts were expected to bear authentic 3' termini. Both constructs were transformed into Agrobacterium tumefaciens cells and infiltrated in Nicotiana benthamiana plants. Three to four weeks post-agroinoculation, the N. benthamiana plants developed typical interveinal chlorosis and LCV infection was detected in the systemic leaves by reverse transcription-PCR. Virions purified from the LCV-infected N. benthamiana plants were flexuous rod-shaped and were transmissible by both B. tabaci biotypes A and B following membrane feeding. These results support the conclusion that Agrobacterium-mediated inoculation of LCV binary vectors in N. benthamiana plants results in LCV infection and the production of biologically active, whitefly transmissible virions. This system represents an important tool for use with reverse genetics designed for the study of LCV gene functions.
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Affiliation(s)
- Angel Y S Chen
- Department of Plant Pathology and Microbiology, University of California, Riverside, CA 92521, United States
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8
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Chung BN, Palukaitis P. Resistance to multiple viruses in transgenic tobacco expressing fused, tandem repeat, virus-derived double-stranded RNAs. Virus Genes 2011; 43:454-64. [PMID: 21853332 DOI: 10.1007/s11262-011-0655-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2011] [Accepted: 08/02/2011] [Indexed: 11/27/2022]
Abstract
Transgenic tobacco plants expressing fused, tandem, inverted-repeat, double-stranded RNAs derived either from the three viruses [potato virus Y (PVY), potato virus A (PVA), and potato leafroll virus (PLRV)] or the five viruses [PVY, PVA, PLRV as well as tobacco rattle virus (TRV), and potato mop-top virus (PMTV)] were generated in this study to examine whether resistance could be achieved against these three viruses or five viruses, respectively, in the same plant. The transgenic lines were engineered to produce 600- or 1000-bp inverted hairpin transcripts with an intron, in two orientations each, which were processed to silencing-inducing RNAs (siRNAs). Fewer lines were regenerated from the transformants with either 1000-bp inverted hairpin transcripts, or a sense-intron-antisense orientation versus antisense-intron-sense orientation. Resistances to PVA and two strains of PVY (-O and -N) were achieved in plants from most of lines examined, as well as resistance to co-infection by a mixture of PVY-O and PVA, applied to the plants by either rub inoculation or using aphids. This was regardless of the orientation of the inserted sequences for the 600-bp insert lines, but only for one orientation of the 1000-bp insert lines. The lines containing the 1000-bp inserts also showed resistance to infection by TRV inoculated by rub inoculation and PMTV inoculated by grafting. However, all the lines showed only low-to-moderate (15-43%) resistance to infection by PLRV transmitted by aphids. The resistances to the various viruses correlated with the levels of accumulation of siRNAs, indicating that the multiple resistances were achieved by RNA silencing.
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Affiliation(s)
- Bong Nam Chung
- National Institute of Horticultural and Herbal Science, Rural Development Administration, Suwon, Republic of Korea
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9
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A reinvestigation provides no evidence for sugar residues on structural proteins of poleroviruses and argues against a role for glycosylation of virus structural proteins in aphid transmission. Virology 2010; 402:303-14. [PMID: 20416918 DOI: 10.1016/j.virol.2010.03.037] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2009] [Revised: 03/19/2010] [Accepted: 03/22/2010] [Indexed: 11/22/2022]
Abstract
Poleroviruses are strictly transmitted by aphids. Glycosylation of Turnip yellows virus (TuYV) was previously reported and this modification was supposed to be required for aphid transmission. Using different approaches based on (i) a lectin-binding assay, (ii) use of specific complex glycan antibodies and (iii) mass spectrometry, we found no evidence that the structural proteins of TuYV and Cucurbit aphid-borne yellow virus (CABYV) carry glycan residues. Moreover, mutation of each of the four potential N-glycosylation sites of the structural protein sequences of CABYV indicated that, unless more than one site on the structural protein is glycosylated, N-glycosylation is not involved in aphid transmission. These results did not corroborate the previous hypothesis for the role of glycosylation in aphid transmission. They, however, revealed the presence of a glycosylated plant protein in purified polerovirus suspensions, whose function in aphid transmission should be further investigated.
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10
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Wang J, Turina M, Stewart LR, Lindbo JA, Falk BW. Agroinoculation of the Crinivirus, Lettuce infectious yellows virus, for systemic plant infection. Virology 2009; 392:131-6. [PMID: 19632699 DOI: 10.1016/j.virol.2009.06.034] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2009] [Revised: 06/09/2009] [Accepted: 06/19/2009] [Indexed: 11/15/2022]
Abstract
Lettuce infectious yellows virus (LIYV) is phloem-limited, non-mechanically transmissible, and is transmitted to plants only by Bemisia tabaci. Here, we developed agroinoculation to deliver LIYV to plants thereby obviating the need for B. tabaci. Agroinfiltration of RNA 1 containing a green fluorescent protein gene into Nicotiana benthamiana leaves resulted in subliminal infections, as judged by green fluorescence. Agroinfiltration of LIYV wild-type RNA 1 and 2 constructs resulted in systemic infections in N. benthamiana plants and typical LIYV symptoms. In addition, partially purified LIYV virions from agroinoculated N. benthamiana plants were successfully acquired via membrane-feeding and transmitted to lettuce plants by B. tabaci. Agroinoculation coupled with targeted mutagenesis technologies will greatly enhance LIYV reverse genetics studies to characterize LIYV gene functions in planta for processes such as virus replication, recombination, trafficking, symptom elicitation and virus-vector interactions.
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Affiliation(s)
- Jinbo Wang
- Department of Plant Pathology, University of California, Davis, One Shields Avenue, Davis, CA 95616, USA
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11
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The C terminus of the polerovirus p5 readthrough domain limits virus infection to the phloem. J Virol 2009; 83:5419-29. [PMID: 19297484 DOI: 10.1128/jvi.02312-08] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Poleroviruses are restricted to vascular phloem tissues from which they are transmitted by their aphid vectors and are not transmissible mechanically. Phloem limitation has been attributed to the absence of virus proteins either facilitating movement or counteracting plant defense. The polerovirus capsid is composed of two forms of coat protein, the major P3 protein and the minor P3/P5 protein, a translational readthrough of P3. P3/P5 is required for insect transmission and acts in trans to facilitate long-distance virus movement in phloem tissue. Specific potato leafroll virus mutants lacking part or all of the P5 domain moved into and infected nonvascular mesophyll tissue when the source-sink relationship of the plant (Solanum sarrachoides) was altered by pruning, with the progeny virus now being transmissible mechanically. However, in a period of months, a phloem-specific distribution of the virus was reestablished in the absence of aphid transmission. Virus from the new phloem-limited infection showed compensatory mutations that would be expected to restore the production of full-length P3/P5 as well as the loss of mechanical transmissibility. The data support our hypothesis that phloem limitation in poleroviruses presumably does not result from a deficiency in the repertoire of virus genes but rather results from P3/P5 accumulation under selection in the infected plant, with the colateral effect of facilitating transmission by phloem-feeding aphid vectors.
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12
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Liu S, Sivakumar S, Wang Z, Bonning BC, Miller WA. The readthrough domain of pea enation mosaic virus coat protein is not essential for virus stability in the hemolymph of the pea aphid. Arch Virol 2009; 154:469-79. [PMID: 19240978 DOI: 10.1007/s00705-009-0327-7] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2008] [Accepted: 01/16/2009] [Indexed: 10/21/2022]
Abstract
A fraction of the coat protein (CP) subunits in virions of members of the family Luteoviridae contain a C-terminal extension called the readthrough domain (RTD). The RTD is necessary for persistent aphid transmission, but its role is unknown. It has been reported to be required for virion stability in the hemolymph. Here, we tested whether this was the case for pea enation mosaic virus (PEMV) virions in the pea aphid (Acyrthosiphon pisum) using RNA1Delta, a natural deletion mutant lacking the middle portion of the RTD ORF, and CPDeltaRTD, in which the entire RTD ORF was deleted. In infected plants, RNA1Delta virions were as abundant and stable as wild-type (WT) virions, while CPDeltaRTD virions were unstable. No RTD of any size was translated from artificial subgenomic mRNA of CPDeltaRTD or RNA1Delta in vitro. Thus, only the major CP was present in the mutant virions. Using real-time RT-PCR to detect virion RNA, no significant differences in the concentration or stability of WT and RNA1Delta virions were detected in the aphid hemolymph at much longer times than are necessary for virus transmission. Thus, the RTD is not necessary for stability of PEMV RNA in the aphid hemolymph, and it must play another role in aphid transmission.
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Affiliation(s)
- Sijun Liu
- Department of Entomology, 418 Science II, Iowa State University, Ames, IA 50011, USA
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13
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Kaplan IB, Lee L, Ripoll DR, Palukaitis P, Gildow F, Gray SM. Point mutations in the potato leafroll virus major capsid protein alter virion stability and aphid transmission. J Gen Virol 2007; 88:1821-1830. [PMID: 17485544 DOI: 10.1099/vir.0.82837-0] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The coat protein (CP) of potato leafroll virus (PLRV) is the primary component of the capsid, and is a multifunctional protein known to be involved in vector transmission and virus movement within plant hosts, in addition to particle assembly. Thirteen mutations were generated in various regions of the CP and tested for their ability to affect virus-host and virus-vector interactions. Nine of the mutations prevented the assembly of stable virions. These mutants were unable to infect systemically four different host species. Furthermore, although virus replication and translation of the CP were similar for the mutants and wild-type virus in individual plant cells, the translation of the CP readthrough product was affected in several of the mutants. Four of the mutants were able to assemble stable particles and infect host plants systemically, similarly to the wild-type virus; however, two of the mutants were transmitted less efficiently by aphid vectors. Based on a computer-generated model of the PLRV CP, the mutations that prevented virion assembly were associated with subunit interfaces, while the amino acid alterations in the assembly-competent mutants were associated with surface loops. This and previous work indicates that the CP structural model has value in predicting the structural architecture of the virion.
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Affiliation(s)
- Igor B Kaplan
- Department of Plant Pathology, Cornell University, Ithaca, NY 14853, USA
- USDA/ARS, Plant Protection Research Unit, Ithaca, NY 14853, USA
| | - Lawrence Lee
- Department of Plant Pathology, Cornell University, Ithaca, NY 14853, USA
- USDA/ARS, Plant Protection Research Unit, Ithaca, NY 14853, USA
| | - Daniel R Ripoll
- Computational Biology Service Unit, Cornell Theory Center, Cornell University, Ithaca, NY 14853, USA
| | - Peter Palukaitis
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Frederick Gildow
- Department of Plant Pathology, Pennsylvania State University, University Park, PA, USA
| | - Stewart M Gray
- Department of Plant Pathology, Cornell University, Ithaca, NY 14853, USA
- USDA/ARS, Plant Protection Research Unit, Ithaca, NY 14853, USA
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14
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Stevens M, Viganó F. Production of a full-length infectious GFP-tagged cDNA clone of Beet mild yellowing virus for the study of plant–polerovirus interactions. Virus Genes 2006; 34:215-21. [PMID: 17143725 DOI: 10.1007/s11262-006-0046-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2006] [Accepted: 09/29/2006] [Indexed: 10/23/2022]
Abstract
The full-length cDNA of Beet mild yellowing virus (Broom's Barn isolate) was sequenced and cloned into the vector pLitmus 29 (pBMYV-BBfl). The sequence of BMYV-BBfl (5721 bases) shared 96% and 98% nucleotide identity with the other complete sequences of BMYV (BMYV-2ITB, France and BMYV-IPP, Germany respectively). Full-length capped RNA transcripts of pBMYV-BBfl were synthesised and found to be biologically active in Arabidopsis thaliana protoplasts following electroporation or PEG inoculation when the protoplasts were subsequently analysed using serological and molecular methods. The BMYV sequence was modified by inserting DNA that encoded the jellyfish green fluorescent protein (GFP) into the P5 gene close to its 3' end. A. thaliana protoplasts electroporated with these RNA transcripts were biologically active and up to 2% of transfected protoplasts showed GFP-specific fluorescence. The exploitation of these cDNA clones for the study of the biology of beet poleroviruses is discussed.
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Affiliation(s)
- Mark Stevens
- Broom's Barn Research Station Higham, Bury St. Edmunds, Suffolk, IP28 6NP, UK.
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15
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Stephan D, Maiss E. Biological properties of Beet mild yellowing virus derived from a full-length cDNA clone. J Gen Virol 2006; 87:445-449. [PMID: 16432033 DOI: 10.1099/vir.0.81565-0] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
A German isolate of Beet mild yellowing virus (BMYV-IPP) was used for RT-PCR-based construction of the first infectious full-length cDNA clone of the virus (BMYV(fl)). The complete genomic sequence was determined and displayed high similarity to the French isolate BMYV-2ITB. The host range of BMYV(fl) was examined by agroinoculation and aphid transmission. Both methods lead to systemic infections in Beta vulgaris, Nicotiana benthamiana, N. clevelandii, N. hesperis, Capsella bursa-pastoris and Lamium purpureum. Immunological investigation by tissue-print immunoassay (TPIA) of agroinoculated plant tissues revealed only local infections restricted to the agroinoculated mesophyll tissues in some plant species. In Nicotiana glutinosa and N. edwardsonii, BMYV was not found in either the agroinoculated tissue or distant tissues by TPIA. So far, BMYV(fl) agroinoculation did not extend or confine the BMYV host range known from aphid transmission experiments but it did describe new local hosts for BMYV.
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Affiliation(s)
- Dirk Stephan
- Institute of Plant Diseases and Plant Protection, University of Hannover, Herrenhäuser Straße 2, D 30419 Hannover, Germany
| | - Edgar Maiss
- Institute of Plant Diseases and Plant Protection, University of Hannover, Herrenhäuser Straße 2, D 30419 Hannover, Germany
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16
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Haupt S, Stroganova T, Ryabov E, Kim SH, Fraser G, Duncan G, Mayo MA, Barker H, Taliansky M. Nucleolar localization of potato leafroll virus capsid proteins. J Gen Virol 2005; 86:2891-2896. [PMID: 16186245 DOI: 10.1099/vir.0.81101-0] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Potato leafroll virus (PLRV) encodes two capsid proteins, major protein (CP) and minor protein (P5), an extended version of the CP produced by occasional translational 'readthrough' of the CP gene. Immunogold electron microscopy showed that PLRV CP is located in the cytoplasm and also localized in the nucleus, preferentially targeting the nucleolus. The nucleolar localization of PLRV CP was also confirmed when it was expressed as a fusion with green fluorescent protein (GFP) via an Agrobacterium vector. Mutational analysis identified a particular sequence within PLRV CP involved in nucleolar targeting [the nucleolar localization signal (NoLS)]. Minor protein P5 also contains the same NoLS, and was targeted to the nucleolus when it was expressed as a fusion with GFP from Agrobacterium. However, P5-GFP lost its nucleolar localization in the presence of replicating PLRV.
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Affiliation(s)
- Sophie Haupt
- University of Dundee, Dundee DD1 4NH, UK
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Tanya Stroganova
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Eugene Ryabov
- University of Warwick - HRI, Wellesbourne, Warwick CV35 9EF, UK
| | - Sang Hyon Kim
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Gill Fraser
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - George Duncan
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Mike A Mayo
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Hugh Barker
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK
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Lee L, Kaplan IB, Ripoll DR, Liang D, Palukaitis P, Gray SM. A surface loop of the potato leafroll virus coat protein is involved in virion assembly, systemic movement, and aphid transmission. J Virol 2005; 79:1207-14. [PMID: 15613347 PMCID: PMC538549 DOI: 10.1128/jvi.79.2.1207-1214.2005] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Two acidic domains of the Potato leafroll virus (PLRV) coat protein, separated by 55 amino acids and predicted to be adjacent surface features on the virion, were the focus of a mutational analysis. Eleven site-directed mutants were generated from a cloned infectious cDNA of PLRV and delivered to plants by Agrobacterium-mediated mechanical inoculation. Alanine substitutions of any of the three amino acids of the sequence EWH (amino acids 170 to 172) or of D177 disrupted the ability of the coat protein to assemble stable particles and the ability of the viral RNA to move systemically in four host plant species. Alanine substitution of E109, D173, or E176 reduced the accumulation of virus in agrobacterium-infiltrated tissues, the efficiency of systemic infection, and the efficiency of aphid transmission relative to wild-type virus, but the mutations did not affect virion stability. A structural model of the PLRV capsid predicted that the amino acids critical for virion assembly were located within a depression at the center of a coat protein trimer. The other amino acids that affected plant infection and/or aphid transmission were predicted to be located around the perimeter of the depression. PLRV virions play key roles in phloem-limited virus movement in plant hosts as well as in transport and persistence in the aphid vectors. These results identified amino acid residues in a surface-oriented loop of the coat protein that are critical for virus assembly and stability, systemic infection of plants, and movement of virus through aphid vectors.
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Affiliation(s)
- Lawrence Lee
- Department of Plant Pathology, 334 Plant Science, Cornell University, Ithaca, NY 14853, USA
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Taliansky M, Kim SH, Mayo MA, Kalinina NO, Fraser G, McGeachy KD, Barker H. Escape of a plant virus from amplicon-mediated RNA silencing is associated with biotic or abiotic stress. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2004; 39:194-205. [PMID: 15225285 DOI: 10.1111/j.1365-313x.2004.02120.x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Strong RNA silencing was induced in plants transformed with an amplicon consisting of full-length cDNA of potato leafroll virus (PLRV) expressing green fluorescent protein (GFP), as shown by low levels of PLRV-GFP accumulation, lack of symptoms and accumulation of amplicon-specific short interfering RNAs (siRNAs). Inoculation of these plants with various viruses known to encode silencing suppressor proteins induced a striking synergistic effect leading to the enhanced accumulation of PLRV-GFP, suggesting that it had escaped from silencing. However, PLRV-GFP escape also occurred following inoculation with viruses that do not encode known silencing suppressors and treatment of silenced plants with biotic or abiotic stress agents. We propose that viruses can evade host RNA-silencing defences by a previously unrecognized mechanism that may be associated with a host response to some types of abiotic stress such as heat shock.
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Affiliation(s)
- Michael Taliansky
- Gene Expression Programme, Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, Scotland, UK
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Liang D, Gray SM, Kaplan I, Palukaitis P. Site-directed mutagenesis and generation of chimeric viruses by homologous recombination in yeast to facilitate analysis of plant-virus interactions. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2004; 17:571-576. [PMID: 15195939 DOI: 10.1094/mpmi.2004.17.6.571] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A yeast homologous recombination system was used to generate mutants and chimeras in the genome of Potato leafroll virus (PLRV). A yeast-bacteria shuttle vector was developed that allows mutants and chimeras generated in yeast to be transformed into Escherichia coli for confirmation of the mutations and transformed into Agrobacterium tumefaciens to facilitate agroinfection of plants by the mutant PLRV genomes. The advantages of the system include the high frequency of recovered mutants generated by yeast homologous recombination, the ability to generate over 20 mutants and chimeras using only two restriction endonuclease sites, the ability to introduce multiple additional sequences using three and four DNA fragments, and the mobilization of the same plasmid from yeast to E. coli, A. tumefaciens, and plants. The wild-type PLRV genome showed no loss of virulence after sequential propagation in yeast, E. coli, and A. tumefaciens. Moreover, many PLRV clones with mutations generated in the capsid protein and readthrough domain of the capsid protein replicated and moved throughout plants. This approach will facilitate the analysis of plant-virus interactions of in vivo-generated mutants for many plant viruses, especially those not transmissible mechanically to plants.
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Affiliation(s)
- Delin Liang
- United States Department of Agriculture-Agricultural Research Service and Department of Plant Pathology, Cornell University, Ithaca, NY 14850, USA
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Taliansky M, Mayo MA, Barker H. Potato leafroll virus: a classic pathogen shows some new tricks. MOLECULAR PLANT PATHOLOGY 2003; 4:81-9. [PMID: 20569366 DOI: 10.1046/j.1364-3703.2003.00153.x] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
UNLABELLED SUMMARY Taxonomy: PLRV is the type species of the genus Polerovirus, in the family Luteoviridae. Isolates are known from most continents, presumably all spread in potato material derived from the Andean region of South America. Physical properties: PLRV particles are isometric and c. 25 nm in diameter. They contain one major (c. 23 kDa) and one minor (c. 80 kDa) protein. The genome is a single 5.8 kb positive sense RNA that has neither a 5'-cap nor 3' poly(A) but carries a VPg. HOST RANGE PLRV has a limited host range; about 20 largely solanaceous species have been infected experimentally. PLRV is a common pathogen of potato, and closely related isolates are occasionally found in tomato, but no other crops are affected. SYMPTOMS Infection, especially from infected seed potato stocks, causes leafrolling and stunting, the extent depending on the potato cultivar. Biological properties: The biology of PLRV is that of a classic luteovirus. Its isometric particles are persistently transmitted by aphids in a non-propagative manner, it multiplies largely in phloem tissue and disease symptoms reflect this localization. A decade or so of molecular study has revealed the many features of PLRV that are characteristic of its family. Key attractions: In recent years some interesting features of PLRV have emerged that are the focus of further investigation. These are, its phloem confinement, its movement in infected plants, its ability to suppress gene silencing and new ideas about the structure of its particles. This review describes the background to PLRV and points towards these new developments.
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Lee L, Palukaitis P, Gray SM. Host-dependent requirement for the Potato leafroll virus 17-kda protein in virus movement. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2002; 15:1086-94. [PMID: 12437307 DOI: 10.1094/mpmi.2002.15.10.1086] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
The requirement for the 17-kDa protein (P17) of Potato leafroll virus (PLRV) in virus movement was investigated in four plant species: potato (Solanum tuberosum), Physalis floridana, Nicotiana benthamiana, and N. clevelandii. Two PLRV P17 mutants were characterized, one that does not translate the P17 and another that expresses a P17 missing the first four amino acids. The P17 mutants were able to replicate and accumulate in agroinoculated leaves of potato and P. floridana, but they were unable to move into vascular tissues and initiate a systemic infection in these plants. In contrast, the P17 mutants were able to spread systemically from inoculated leaves in both Nicotiana spp., although the efficiency of infection was reduced relative to wild-type PLRV. Examination of virus distribution in N. benthamiana plants using tissue immunoblotting techniques revealed that the wild-type PLRV and P17 mutants followed a similar movement pathway out of the inoculated leaves. Virus first moved upward to the apical tissues and then downward. The P17 mutants, however, infected fewer phloem-associated cells, were slower than wild-type PLRV in moving out of the inoculated tissue and into apical tissues, and were unable to infect any mature leaves present on the plant at the time of inoculation.
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Affiliation(s)
- Lawrence Lee
- United States Department of Agriculture-Agricultural Research Service, Department of Plant Pathology, Cornell University, Ithaca, NY 14850, USA
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Abstract
Like typical luteoviruses, Potato leafroll virus (PLRV) cannot be transmitted mechanically by rubbing plants with solutions containing virus particles. However, PLRV was found to be mechanically transmissible from extracts of plants that had been inoculated by viruliferous aphids and then post-inoculated with Pea enation mosaic virus-2 (PEMV-2). Unlike the asymptomatic infections induced by either virus alone, double infections in Nicotiana benthamiana induced necrotic symptoms with some line patterning and vein yellowing. Infective PLRV was recovered from a purified virus preparation by inoculating plants mechanically with purified virus particles mixed with PEMV-2. Similarly, Beet mild yellowing virus was readily transmitted mechanically from mixtures containing PEMV-2. PLRV was also transmissible from mixtures made with extracts of plants infected with Groundnut rosette virus, although less efficiently than from mixtures containing PEMV-2. This novel means of transmitting PLRV, and perhaps other poleroviruses, should prove very useful in a number of fields of luteovirus research.
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Affiliation(s)
- Mike Mayo
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK1
| | - Eugene Ryabov
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK1
| | - Gillian Fraser
- Scottish Crop Research Institute, Invergowrie, Dundee DD2 5DA, UK1
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