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Chen J, Wang Y. Understanding the salinity resilience and productivity of halophytes in saline environments. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 346:112171. [PMID: 38969140 DOI: 10.1016/j.plantsci.2024.112171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 06/15/2024] [Accepted: 06/21/2024] [Indexed: 07/07/2024]
Abstract
The escalating salinity levels in cultivable soil pose a significant threat to agricultural productivity and, consequently, human sustenance. This problem is being exacerbated by natural processes and human activities, coinciding with a period of rapid population growth. Developing halophytic crops is needed to ensure food security is not impaired and land resources can be used sustainably. Evolution has created many close halophyte relatives of our major glycophytic crops, such as Puccinellia tenuiflora (relative of barley and wheat), Oryza coarctata (relative of rice) and Glycine soja (relative of soybean). There are also some halophytes have been subjected to semi-domestication and are considered as minor crops, such as Chenopodium quinoa. In this paper, we examine the prevailing comprehension of robust salinity resilience in halophytes. We summarize the existing strategies and technologies that equip researchers with the means to enhance the salt tolerance capabilities of primary crops and investigate the genetic makeup of halophytes.
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Affiliation(s)
- Jiahong Chen
- State Key Laboratory of Plant Molecular Genetics, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yuan Wang
- State Key Laboratory of Plant Molecular Genetics, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China; Dalian Practical Biotechnology Co. LTD., Dalian, Liaoning 116200, China.
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Thomas SK, Hoek KV, Ogoti T, Duong H, Angelovici R, Pires JC, Mendoza-Cozatl D, Washburn J, Schenck CA. Halophytes and heavy metals: A multi-omics approach to understand the role of gene and genome duplication in the abiotic stress tolerance of Cakile maritima. AMERICAN JOURNAL OF BOTANY 2024; 111:e16310. [PMID: 38600732 DOI: 10.1002/ajb2.16310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Revised: 02/02/2024] [Accepted: 02/05/2024] [Indexed: 04/12/2024]
Abstract
PREMISE The origin of diversity is a fundamental biological question. Gene duplications are one mechanism that provides raw material for the emergence of novel traits, but evolutionary outcomes depend on which genes are retained and how they become functionalized. Yet, following different duplication types (polyploidy and tandem duplication), the events driving gene retention and functionalization remain poorly understood. Here we used Cakile maritima, a species that is tolerant to salt and heavy metals and shares an ancient whole-genome triplication with closely related salt-sensitive mustard crops (Brassica), as a model to explore the evolution of abiotic stress tolerance following polyploidy. METHODS Using a combination of ionomics, free amino acid profiling, and comparative genomics, we characterize aspects of salt stress response in C. maritima and identify retained duplicate genes that have likely enabled adaptation to salt and mild levels of cadmium. RESULTS Cakile maritima is tolerant to both cadmium and salt treatments through uptake of cadmium in the roots. Proline constitutes greater than 30% of the free amino acid pool in C. maritima and likely contributes to abiotic stress tolerance. We find duplicated gene families are enriched in metabolic and transport processes and identify key transport genes that may be involved in C. maritima abiotic stress tolerance. CONCLUSIONS These findings identify pathways and genes that could be used to enhance plant resilience and provide a putative understanding of the roles of duplication types and retention on the evolution of abiotic stress response.
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Affiliation(s)
- Shawn K Thomas
- Division of Biological Sciences, University of Missouri, Columbia, 65211, MO, USA
- Bioinformatics and Analytics Core, University of Missouri, Columbia, 65211, MO, USA
- Interdisciplinary Plant Group, University of Missouri, Columbia, 65211, MO, USA
| | - Kathryn Vanden Hoek
- Department of Biochemistry, University of Missouri, Columbia, 65211, MO, USA
| | - Tasha Ogoti
- Department of Computer Science, University of Missouri, Columbia, 65211, MO, USA
| | - Ha Duong
- Interdisciplinary Plant Group, University of Missouri, Columbia, 65211, MO, USA
- Department of Biochemistry, University of Missouri, Columbia, 65211, MO, USA
| | - Ruthie Angelovici
- Division of Biological Sciences, University of Missouri, Columbia, 65211, MO, USA
- Interdisciplinary Plant Group, University of Missouri, Columbia, 65211, MO, USA
| | - J Chris Pires
- Soil and Crop Sciences, Colorado State University, Fort Collins, 80523-1170, CO, USA
| | - David Mendoza-Cozatl
- Interdisciplinary Plant Group, University of Missouri, Columbia, 65211, MO, USA
- Division of Plant Sciences and Technology, University of Missouri, Columbia, 65211, MO, USA
| | - Jacob Washburn
- Interdisciplinary Plant Group, University of Missouri, Columbia, 65211, MO, USA
- Plant Genetics Research Unit, USDA-ARS, Columbia, 65211, MO, USA
| | - Craig A Schenck
- Interdisciplinary Plant Group, University of Missouri, Columbia, 65211, MO, USA
- Department of Biochemistry, University of Missouri, Columbia, 65211, MO, USA
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Jēkabsone A, Karlsons A, Osvalde A, Ievinsh G. Effect of Na, K and Ca Salts on Growth, Physiological Performance, Ion Accumulation and Mineral Nutrition of Mesembryanthemum crystallinum. PLANTS (BASEL, SWITZERLAND) 2024; 13:190. [PMID: 38256743 PMCID: PMC10818879 DOI: 10.3390/plants13020190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2023] [Revised: 01/06/2024] [Accepted: 01/09/2024] [Indexed: 01/24/2024]
Abstract
Mesembryanthemum crystallinum L. is an obligatory halophyte species showing optimum growth at elevated soil salinity levels, but the ionic requirements for growth stimulation are not known. The aim of the present study was to compare the effects of sodium, potassium and calcium in the form of chloride and nitrate salts on the growth, physiological performance, ion accumulation and mineral nutrition of M. crystallinum plants in controlled conditions. In a paradoxical way, while sodium and potassium had comparable stimulative effect on plant growth, the effect of calcium was strongly negative even at a relatively low concentration, eventually leading to plant death. Moreover, the effect of Ca nitrate was less negative in comparison to that of Ca chloride, but K in the form of nitrate had some negative effects. There were three components of the stimulation of biomass accumulation by NaCl and KCl salinity in M. crsytallinum: the increase in tissue water content, increase in ion accumulation, and growth activation. As optimum growth was in a salinity range from 20 to 100 mM, the increase in the dry biomass of plants at a moderate (200 mM) and high (400 mM) salinity in comparison to control plants was mostly due to ion accumulation. Among physiological indicators, changes in leaf chlorophyll concentration appeared relatively late, but the chlorophyll a fluorescence parameter, Performance Index Total, was the most sensitive to the effect of salts. In conclusion, both sodium and potassium in the form of chloride salts are efficient in promoting the optimum growth of M. crystallinum plants. However, mechanisms leading to the negative effect of calcium on plants need to be assessed further.
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Affiliation(s)
- Astra Jēkabsone
- Department of Plant Physiology, Faculty of Biology, University of Latvia, 1 Jelgavas Str., LV-1004 Rīga, Latvia;
| | - Andis Karlsons
- Institute of Biology, University of Latvia, 4 Ojāra Vācieša Str., LV-1004 Rīga, Latvia; (A.K.); (A.O.)
| | - Anita Osvalde
- Institute of Biology, University of Latvia, 4 Ojāra Vācieša Str., LV-1004 Rīga, Latvia; (A.K.); (A.O.)
| | - Gederts Ievinsh
- Department of Plant Physiology, Faculty of Biology, University of Latvia, 1 Jelgavas Str., LV-1004 Rīga, Latvia;
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Sato R, Kondo Y, Agarie S. The first released available genome of the common ice plant ( Mesembryanthemum crystallinum L.) extended the research region on salt tolerance, C 3-CAM photosynthetic conversion, and halophilism. F1000Res 2024; 12:448. [PMID: 38618020 PMCID: PMC11016173 DOI: 10.12688/f1000research.129958.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 01/03/2024] [Indexed: 04/16/2024] Open
Abstract
Background The common ice plant ( Mesembryanthemum crystallinum L.) is an annual herb belonging to the genus Mesembryanthemum of the family Aizoaceae, native to Southern Africa. Methods We performed shotgun genome paired-end sequencing using the Illumina platform to determine the genome sequence of the ice plants. We assembled the whole genome sequences using the genome assembler "ALGA" and "Redundans", then released them as available genomic information. Finally, we mainly estimated the potential genomic function by the homology search method. Results A draft genome was generated with a total length of 286 Mb corresponding to 79.2% of the estimated genome size (361 Mb), consisting of 49,782 contigs. It encompassed 93.49% of the genes of terrestrial higher plants, 99.5% of the ice plant transcriptome, and 100% of known DNA sequences. In addition, 110.9 Mb (38.8%) of repetitive sequences and untranslated regions, 971 tRNA, and 100 miRNA loci were identified, and their effects on stress tolerance and photosynthesis were investigated. Molecular phylogenetic analysis based on ribosomal DNA among 26 kinds of plant species revealed genetic similarity between the ice plant and poplar, which have salt tolerance. Overall, 35,702 protein-coding regions were identified in the genome, of which 56.05% to 82.59% were annotated and submitted to domain searches and gene ontology (GO) analyses, which found that eighteen GO terms stood out among five plant species. These terms were related to biological defense, growth, reproduction, transcription, post-transcription, and intermembrane transportation, regarded as one of the fundamental results of using the utilized ice plant genome. Conclusions The information that we characterized is useful for elucidation of the mechanism of growth promotion under salinity and reversible conversion of the photosynthetic type from C3 to Crassulacean Acid Metabolism (CAM).
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Affiliation(s)
- Ryoma Sato
- Graduate school of Bioresource and Bioenvironmental Sciences, Kyushu University, 744 Motooka Nishi-ku Fukuoka, 819-0395, Japan
| | - Yuri Kondo
- Graduate school of Bioresource and Bioenvironmental Sciences, Kyushu University, 744 Motooka Nishi-ku Fukuoka, 819-0395, Japan
| | - Sakae Agarie
- Faculty of Agriculture, Kyushu University, 744 Motooka Nishi-ku Fukuoka, 819-0395, Japan
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Moog MW, Yang X, Bendtsen AK, Dong L, Crocoll C, Imamura T, Mori M, Cushman JC, Kant MR, Palmgren M. Epidermal bladder cells as a herbivore defense mechanism. Curr Biol 2023; 33:4662-4673.e6. [PMID: 37852262 DOI: 10.1016/j.cub.2023.09.063] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 09/21/2023] [Accepted: 09/26/2023] [Indexed: 10/20/2023]
Abstract
The aerial surfaces of quinoa (Chenopodium quinoa) and common ice plant (Mesembryanthemum crystallinum) are covered with a layer of epidermal bladder cells (EBCs), which are modified non-glandular trichomes previously considered to be key to the extreme salt and drought tolerance of these plants. Here, however, we find that EBCs of these plants play only minor roles, if any, in abiotic stress tolerance and in fact are detrimental under conditions of water deficit. We report that EBCs instead function as deterrents to a broad range of generalist arthropod herbivores, through their combined function of forming both a chemical and a physical barrier, and they also serve a protective function against a phytopathogen. Our study overturns current models that link EBCs to salt and drought tolerance and assigns new functions to these structures that might provide novel possibilities for protecting crops from arthropod pests.
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Affiliation(s)
- Max W Moog
- Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
| | - Xiuyan Yang
- Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark
| | - Amalie K Bendtsen
- Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark
| | - Lin Dong
- Evolutionary and Population Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, Amsterdam, the Netherlands
| | - Christoph Crocoll
- Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark
| | - Tomohiro Imamura
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa 921-8836, Japan
| | - Masashi Mori
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa 921-8836, Japan
| | - John C Cushman
- Department of Biochemistry and Molecular Biology, MS200, University of Nevada, Reno, NV 89557-0014, USA
| | - Merijn R Kant
- Evolutionary and Population Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, Amsterdam, the Netherlands
| | - Michael Palmgren
- Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
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Tran KN, Pantha P, Wang G, Kumar N, Wijesinghege C, Oh DH, Wimalagunasekara S, Duppen N, Li H, Hong H, Johnson JC, Kelt R, Matherne MG, Nguyen TT, Garcia JR, Clement A, Tran D, Crain C, Adhikari P, Zhang Y, Foroozani M, Sessa G, Larkin JC, Smith AP, Longstreth D, Finnegan P, Testerink C, Barak S, Dassanayake M. Balancing growth amidst salt stress - lifestyle perspectives from the extremophyte model Schrenkiella parvula. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 116:921-941. [PMID: 37609706 DOI: 10.1111/tpj.16396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Accepted: 07/08/2023] [Indexed: 08/24/2023]
Abstract
Schrenkiella parvula, a leading extremophyte model in Brassicaceae, can grow and complete its lifecycle under multiple environmental stresses, including high salinity. Yet, the key physiological and structural traits underlying its stress-adapted lifestyle are unknown along with trade-offs when surviving salt stress at the expense of growth and reproduction. We aimed to identify the influential adaptive trait responses that lead to stress-resilient and uncompromised growth across developmental stages when treated with salt at levels known to inhibit growth in Arabidopsis and most crops. Its resilient growth was promoted by traits that synergistically allowed primary root growth in seedlings, the expansion of xylem vessels across the root-shoot continuum, and a high capacity to maintain tissue water levels by developing thicker succulent leaves while enabling photosynthesis during salt stress. A successful transition from vegetative to reproductive phase was initiated by salt-induced early flowering, resulting in viable seeds. Self-fertilization in salt-induced early flowering was dependent upon filament elongation in flowers otherwise aborted in the absence of salt during comparable plant ages. The maintenance of leaf water status promoting growth, and early flowering to ensure reproductive success in a changing environment, were among the most influential traits that contributed to the extremophytic lifestyle of S. parvula.
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Affiliation(s)
- Kieu-Nga Tran
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Pramod Pantha
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Guannan Wang
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Narender Kumar
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Chathura Wijesinghege
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Dong-Ha Oh
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Samadhi Wimalagunasekara
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Nick Duppen
- Albert Katz International School for Desert Studies, Ben-Gurion University of the Negev, Sde Boqer Campus, Beersheba, 8499000, Israel
| | - Hongfei Li
- Laboratory of Plant Physiology, Plant Sciences Group, Wageningen University and Research, 6708PB, Wageningen, The Netherlands
| | - Hyewon Hong
- Department of Plant Biology, University of Illinois, Urbana-Champaign, Illinois, 61801, USA
| | - John C Johnson
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Ross Kelt
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Megan G Matherne
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Thu T Nguyen
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Jason R Garcia
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Ashley Clement
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - David Tran
- Department of Biochemistry & Department of Psychology, University of Miami, Coral Gables, Florida, 33146, USA
| | - Colt Crain
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
- Louisiana School for Math, Science and the Arts, Natchitoches, Louisiana, 71457, USA
| | - Prava Adhikari
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Yanxia Zhang
- Laboratory of Plant Physiology, Plant Sciences Group, Wageningen University and Research, 6708PB, Wageningen, The Netherlands
| | - Maryam Foroozani
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Guido Sessa
- School of Plant Sciences and Food Security, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel
| | - John C Larkin
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Aaron P Smith
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - David Longstreth
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
| | - Patrick Finnegan
- School of Biological Sciences, University of Western Australia, Perth, 6009, Australia
| | - Christa Testerink
- Laboratory of Plant Physiology, Plant Sciences Group, Wageningen University and Research, 6708PB, Wageningen, The Netherlands
| | - Simon Barak
- French Associates' Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sde Boqer Campus, Beersheba, 8499000, Israel
| | - Maheshi Dassanayake
- Department of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana, 70803, USA
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Flores-Duarte NJ, Pajuelo E, Mateos-Naranjo E, Navarro-Torre S, Rodríguez-Llorente ID, Redondo-Gómez S, Carrasco López JA. A Culturomics-Based Bacterial Synthetic Community for Improving Resilience towards Arsenic and Heavy Metals in the Nutraceutical Plant Mesembryanthemum crystallinum. Int J Mol Sci 2023; 24:7003. [PMID: 37108166 PMCID: PMC10138511 DOI: 10.3390/ijms24087003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 04/07/2023] [Accepted: 04/08/2023] [Indexed: 04/29/2023] Open
Abstract
Plant-growth-promoting bacteria (PGPB) help plants thrive in polluted environments and increase crops yield using fewer inputs. Therefore, the design of tailored biofertilizers is of the utmost importance. The purpose of this work was to test two different bacterial synthetic communities (SynComs) from the microbiome of Mesembryanthemum crystallinum, a moderate halophyte with cosmetic, pharmaceutical, and nutraceutical applications. The SynComs were composed of specific metal-resistant plant-growth-promoting rhizobacteria and endophytes. In addition, the possibility of modulating the accumulation of nutraceutical substances by the synergetic effect of metal stress and inoculation with selected bacteria was tested. One of the SynComs was isolated on standard tryptone soy agar (TSA), whereas the other was isolated following a culturomics approach. For that, a culture medium based on M. crystallinum biomass, called Mesem Agar (MA), was elaborated. Bacteria of three compartments (rhizosphere soil, root endophytes, and shoot endophytes) were isolated on standard TSA and MA media, stablishing two independent collections. All bacteria were tested for PGP properties, secreted enzymatic activities, and resistance towards As, Cd, Cu, and Zn. The three best bacteria from each collection were selected in order to produce two different consortiums (denominated TSA- and MA-SynComs, respectively), whose effect on plant growth and physiology, metal accumulation, and metabolomics was evaluated. Both SynComs, particularly MA, improved plant growth and physiological parameters under stress by a mixture of As, Cd, Cu, and Zn. Regarding metal accumulation, the concentrations of all metals/metalloids in plant tissues were below the threshold for plant metal toxicity, indicating that this plant is able to thrive in polluted soils when assisted by metal/metalloid-resistant SynComs and could be safely used for pharmaceutical purposes. Initial metabolomics analyses depict changes in plant metabolome upon exposure to metal stress and inoculation, suggesting the possibility of modulating the concentration of high-value metabolites. In addition, the usefulness of both SynComs was tested in a crop plant, namely Medicago sativa (alfalfa). The results demonstrate the effectiveness of these biofertilizers in alfalfa, improving plant growth, physiology, and metal accumulation.
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Affiliation(s)
- Noris J. Flores-Duarte
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, c/ Profesor García González, 2, 41012 Sevilla, Spain; (N.J.F.-D.); (S.N.-T.); (I.D.R.-L.)
| | - Eloísa Pajuelo
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, c/ Profesor García González, 2, 41012 Sevilla, Spain; (N.J.F.-D.); (S.N.-T.); (I.D.R.-L.)
| | - Enrique Mateos-Naranjo
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Avda. Reina Mercedes, s/n, 41012 Sevilla, Spain; (E.M.-N.); (S.R.-G.)
| | - Salvadora Navarro-Torre
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, c/ Profesor García González, 2, 41012 Sevilla, Spain; (N.J.F.-D.); (S.N.-T.); (I.D.R.-L.)
| | - Ignacio D. Rodríguez-Llorente
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, c/ Profesor García González, 2, 41012 Sevilla, Spain; (N.J.F.-D.); (S.N.-T.); (I.D.R.-L.)
| | - Susana Redondo-Gómez
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Avda. Reina Mercedes, s/n, 41012 Sevilla, Spain; (E.M.-N.); (S.R.-G.)
| | - José A. Carrasco López
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, c/ Profesor García González, 2, 41012 Sevilla, Spain; (N.J.F.-D.); (S.N.-T.); (I.D.R.-L.)
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Rasouli F, Kiani-Pouya A, Movahedi A, Wang Y, Li L, Yu M, Pourkheirandish M, Zhou M, Chen Z, Zhang H, Shabala S. Guard Cell Transcriptome Reveals Membrane Transport, Stomatal Development and Cell Wall Modifications as Key Traits Involved in Salinity Tolerance in Halophytic Chenopodium quinoa. PLANT & CELL PHYSIOLOGY 2023; 64:204-220. [PMID: 36355785 DOI: 10.1093/pcp/pcac158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2022] [Revised: 11/06/2022] [Accepted: 11/09/2022] [Indexed: 06/16/2023]
Abstract
A comparative investigation was conducted to evaluate transcriptional changes in guard cells (GCs) of closely related halophytic (Chenopodium quinoa) and glycophytic (Spinacia oleracea) species. Plants were exposed to 3 weeks of 250 mM sodium chloride treatment, and GC-enriched epidermal fragments were mechanically prepared. In both species, salt-responsive genes were mainly related to categories of protein metabolism, secondary metabolites, signal transduction and transport systems. Genes related to abscisic acid (ABA) signaling and ABA biosynthesis were strongly induced in quinoa but not in spinach GCs. Also, expression of the genes encoding transporters of amino acids, proline, sugars, sucrose and potassium increased in quinoa GCs under salinity stress. Analysis of cell-wall-related genes suggests that genes involved in lignin synthesis (e.g. lignin biosynthesis LACCASE 4) were highly upregulated by salt in spinach GCs. In contrast, transcripts related to cell wall plasticity Pectin methylesterase3 (PME3) were highly induced in quinoa. Faster stomatal response to light and dark measured by observing kinetics of changes in stomatal conductance in quinoa might be associated with higher plasticity of the cell wall regulated by PME3 Furthermore, genes involved in the inhibition of stomatal development and differentiation were highly expressed by salt in quinoa, but not in spinach. These changes correlated with reduced stomatal density and index in quinoa, thus improving its water use efficiency. The fine modulation of transporters, cell wall modification and controlling stomatal development in GCs of quinoa may have resulted in high K+/Na+ ratio, lower stomatal conductance and higher stomatal speed for better adaptation to salinity stress in quinoa.
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Affiliation(s)
- Fatemeh Rasouli
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7001, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- State Key Laboratory of Molecular Plant Genetics, Shanghai Center for Plant Stress Biology, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Ali Kiani-Pouya
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC 3010, Australia
- State Key Laboratory of Molecular Plant Genetics, Shanghai Center for Plant Stress Biology, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Ali Movahedi
- Co-Innovation Center for Sustainable Forestry in Southern China, Key Laboratory of Forest Genetics and Biotechnology, Ministry of Education, College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China
| | - Yuan Wang
- State Key Laboratory of Molecular Plant Genetics, Shanghai Center for Plant Stress Biology, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Leiting Li
- State Key Laboratory of Molecular Plant Genetics, Shanghai Center for Plant Stress Biology, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Min Yu
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
| | - Mohammad Pourkheirandish
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC 3010, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7001, Australia
| | - Zhonghua Chen
- School of Science and Health, Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2747, Australia
| | - Heng Zhang
- State Key Laboratory of Molecular Plant Genetics, Shanghai Center for Plant Stress Biology, Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7001, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- School of Biological Sciences, University of Western Australia, Perth, WA 6009, Australia
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9
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Gómez-Méndez MF, Amezcua-Romero JC, Rosas-Santiago P, Hernández-Domínguez EE, de Luna-Valdez LA, Ruiz-Salas JL, Vera-Estrella R, Pantoja O. Ice plant root plasma membrane aquaporins are regulated by clathrin-coated vesicles in response to salt stress. PLANT PHYSIOLOGY 2023; 191:199-218. [PMID: 36383186 PMCID: PMC9806614 DOI: 10.1093/plphys/kiac515] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
The regulation of root Plasma membrane (PM) Intrinsic Protein (PIP)-type aquaporins (AQPs) is potentially important for salinity tolerance. However, the molecular and cellular details underlying this process in halophytes remain unclear. Using free-flow electrophoresis and label-free proteomics, we report that the increased abundance of PIPs at the PM of the halophyte ice plant (Mesembryanthemum crystallinum L.) roots under salinity conditions is regulated by clathrin-coated vesicles (CCV). To understand this regulation, we analyzed several components of the M. crystallinum CCV complexes: clathrin light chain (McCLC) and subunits μ1 and μ2 of the adaptor protein (AP) complex (McAP1μ and McAP2μ). Co-localization analyses revealed the association between McPIP1;4 and McAP2μ and between McPIP2;1 and McAP1μ, observations corroborated by mbSUS assays, suggesting that AQP abundance at the PM is under the control of CCV. The ability of McPIP1;4 and McPIP2;1 to form homo- and hetero-oligomers was tested and confirmed, as well as their activity as water channels. Also, we found increased phosphorylation of McPIP2;1 only at the PM in response to salt stress. Our results indicate root PIPs from halophytes might be regulated through CCV trafficking and phosphorylation, impacting their localization, transport activity, and abundance under salinity conditions.
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Affiliation(s)
| | - Julio César Amezcua-Romero
- Departamento de Ciencias Agrogenómicas, Escuela Nacional de Estudios Superiores, Unidad León, Universidad Nacional Autónoma de México, León, México
| | - Paul Rosas-Santiago
- Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, México
| | | | - Luis Alberto de Luna-Valdez
- Department of Microbiology & Plant Pathology, Institute for Integrative Genome Biology, University of California, Riverside, California, USA
| | - Jorge Luis Ruiz-Salas
- Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, México
| | - Rosario Vera-Estrella
- Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, México
| | - Omar Pantoja
- Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, México
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10
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Shen S, Li N, Wang Y, Zhou R, Sun P, Lin H, Chen W, Yu T, Liu Z, Wang Z, Tan X, Zhu C, Feng S, Zhang Y, Song X. High-quality ice plant reference genome analysis provides insights into genome evolution and allows exploration of genes involved in the transition from C3 to CAM pathways. PLANT BIOTECHNOLOGY JOURNAL 2022; 20:2107-2122. [PMID: 35838009 PMCID: PMC9616530 DOI: 10.1111/pbi.13892] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Revised: 05/19/2022] [Accepted: 07/10/2022] [Indexed: 06/15/2023]
Abstract
Ice plant (Mesembryanthemum crystallinum), a member of the Aizoaceae family, is a typical halophyte crop and a model plant for studying the mechanism of transition from C3 photosynthesis to crassulacean acid metabolism (CAM). Here, we report a high-quality chromosome-level ice plant genome sequence. This 98.05% genome sequence is anchored to nine chromosomes, with a total length of 377.97 Mb and an N50 scaffold of 40.45 Mb. Almost half of the genome (48.04%) is composed of repetitive sequences, and 24 234 genes have been annotated. Subsequent to the ancient whole-genome triplication (WGT) that occurred in eudicots, there has been no recent whole-genome duplication (WGD) or WGT in ice plants. However, we detected a novel WGT event that occurred in the same order in Simmondsia chinensis, which was previously overlooked. Our findings revealed that ice plants have undergone chromosome rearrangements and gene removal during evolution. Combined with transcriptome and comparative genomic data and expression verification, we identified several key genes involved in the CAM pathway and constructed a comprehensive network. As the first genome of the Aizoaceae family to be released, this report will provide a rich data resource for comparative and functional genomic studies of Aizoaceae, especially for studies on salt tolerance and C3-to-CAM transitions to improve crop yield and resistance.
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Affiliation(s)
- Shaoqin Shen
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Nan Li
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Yujie Wang
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Rong Zhou
- Department of Food ScienceAarhus UniversityAarhusDenmark
| | - Pengchuan Sun
- Key Laboratory for Bio‐Resource and Eco‐Environment of Ministry of Education, College of Life SciencesSichuan UniversityChengduChina
| | - Hao Lin
- School of Life Science and Technology and Center for Informational BiologyUniversity of Electronic Science and Technology of ChinaChengduChina
| | - Wei Chen
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
- Innovative Institute of Chinese Medicine and PharmacyChengdu University of Traditional Chinese MedicineChengduChina
| | - Tong Yu
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Zhuo Liu
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Zhiyuan Wang
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Xiao Tan
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Changping Zhu
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Shuyan Feng
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Yu Zhang
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
| | - Xiaoming Song
- College of Life Sciences/Center for Genomics and Bio‐computingNorth China University of Science and TechnologyTangshanHebeiChina
- School of Life Science and Technology and Center for Informational BiologyUniversity of Electronic Science and Technology of ChinaChengduChina
- Food Science and Technology DepartmentUniversity of Nebraska‐LincolnLincolnNebraskaUSA
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11
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Eshel G, Duppen N, Wang G, Oh D, Kazachkova Y, Herzyk P, Amtmann A, Gordon M, Chalifa‐Caspi V, Oscar MA, Bar‐David S, Marshall‐Colon A, Dassanayake M, Barak S. Positive selection and heat-response transcriptomes reveal adaptive features of the Brassicaceae desert model, Anastatica hierochuntica. THE NEW PHYTOLOGIST 2022; 236:1006-1026. [PMID: 35909295 PMCID: PMC9804903 DOI: 10.1111/nph.18411] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Accepted: 07/18/2022] [Indexed: 06/15/2023]
Abstract
Plant adaptation to a desert environment and its endemic heat stress is poorly understood at the molecular level. The naturally heat-tolerant Brassicaceae species Anastatica hierochuntica is an ideal extremophyte model to identify genetic adaptations that have evolved to allow plants to tolerate heat stress and thrive in deserts. We generated an A. hierochuntica reference transcriptome and identified extremophyte adaptations by comparing Arabidopsis thaliana and A. hierochuntica transcriptome responses to heat, and detecting positively selected genes in A. hierochuntica. The two species exhibit similar transcriptome adjustment in response to heat and the A. hierochuntica transcriptome does not exist in a constitutive heat 'stress-ready' state. Furthermore, the A. hierochuntica global transcriptome as well as heat-responsive orthologs, display a lower basal and higher heat-induced expression than in A. thaliana. Genes positively selected in multiple extremophytes are associated with stomatal opening, nutrient acquisition, and UV-B induced DNA repair while those unique to A. hierochuntica are consistent with its photoperiod-insensitive, early-flowering phenotype. We suggest that evolution of a flexible transcriptome confers the ability to quickly react to extreme diurnal temperature fluctuations characteristic of a desert environment while positive selection of genes involved in stress tolerance and early flowering could facilitate an opportunistic desert lifestyle.
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Affiliation(s)
- Gil Eshel
- Albert Katz International School for Desert StudiesBen‐Gurion University of the NegevSde Boqer CampusMidreshet Ben‐Gurion8499000Israel
| | - Nick Duppen
- Albert Katz International School for Desert StudiesBen‐Gurion University of the NegevSde Boqer CampusMidreshet Ben‐Gurion8499000Israel
| | - Guannan Wang
- Department of Biological SciencesLouisiana State UniversityBaton RougeLA70803USA
| | - Dong‐Ha Oh
- Department of Biological SciencesLouisiana State UniversityBaton RougeLA70803USA
| | - Yana Kazachkova
- Albert Katz International School for Desert StudiesBen‐Gurion University of the NegevSde Boqer CampusMidreshet Ben‐Gurion8499000Israel
| | - Pawel Herzyk
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life SciencesUniversity of GlasgowGlasgowG12 8QQUK
| | - Anna Amtmann
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life SciencesUniversity of GlasgowGlasgowG12 8QQUK
| | - Michal Gordon
- Bioinformatics Core Facility, The National Institute for Biotechnology in the NegevBen‐Gurion University of the NegevBeer‐Sheva8410501Israel
| | - Vered Chalifa‐Caspi
- Bioinformatics Core Facility, The National Institute for Biotechnology in the NegevBen‐Gurion University of the NegevBeer‐Sheva8410501Israel
| | - Michelle Arland Oscar
- Blaustein Center for Scientific CooperationBen‐Gurion University of the NegevSde Boqer CampusMidreshet Ben‐Gurion8499000Israel
| | - Shirli Bar‐David
- Mitrani Department of Desert Ecology, Jacob Blaustein Institutes for Desert ResearchBen‐Gurion University of the NegevSde Boqer CampusMidreshet Ben‐Gurion8499000Israel
| | - Amy Marshall‐Colon
- Department of Plant BiologyUniversity of Illinois at Urbana‐ChampaignUrbanaIL61801USA
| | - Maheshi Dassanayake
- Department of Biological SciencesLouisiana State UniversityBaton RougeLA70803USA
| | - Simon Barak
- French Associates' Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert ResearchBen‐Gurion University of the NegevSde Boqer CampusMidreshet Ben‐Gurion8499000Israel
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12
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Villalobos-López MA, Arroyo-Becerra A, Quintero-Jiménez A, Iturriaga G. Biotechnological Advances to Improve Abiotic Stress Tolerance in Crops. Int J Mol Sci 2022; 23:12053. [PMID: 36233352 PMCID: PMC9570234 DOI: 10.3390/ijms231912053] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 10/02/2022] [Accepted: 10/06/2022] [Indexed: 11/16/2022] Open
Abstract
The major challenges that agriculture is facing in the twenty-first century are increasing droughts, water scarcity, flooding, poorer soils, and extreme temperatures due to climate change. However, most crops are not tolerant to extreme climatic environments. The aim in the near future, in a world with hunger and an increasing population, is to breed and/or engineer crops to tolerate abiotic stress with a higher yield. Some crop varieties display a certain degree of tolerance, which has been exploited by plant breeders to develop varieties that thrive under stress conditions. Moreover, a long list of genes involved in abiotic stress tolerance have been identified and characterized by molecular techniques and overexpressed individually in plant transformation experiments. Nevertheless, stress tolerance phenotypes are polygenetic traits, which current genomic tools are dissecting to exploit their use by accelerating genetic introgression using molecular markers or site-directed mutagenesis such as CRISPR-Cas9. In this review, we describe plant mechanisms to sense and tolerate adverse climate conditions and examine and discuss classic and new molecular tools to select and improve abiotic stress tolerance in major crops.
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Affiliation(s)
- Miguel Angel Villalobos-López
- Laboratorio de Genómica Funcional y Biotecnología de Plantas, Centro de Investigación en Biotecnología Aplicada, Instituto Politécnico Nacional, Ex-Hacienda San Juan Molino Carretera Estatal Km 1.5, Santa Inés-Tecuexcomac-Tepetitla 90700, Tlaxcala, Mexico
| | - Analilia Arroyo-Becerra
- Laboratorio de Genómica Funcional y Biotecnología de Plantas, Centro de Investigación en Biotecnología Aplicada, Instituto Politécnico Nacional, Ex-Hacienda San Juan Molino Carretera Estatal Km 1.5, Santa Inés-Tecuexcomac-Tepetitla 90700, Tlaxcala, Mexico
| | - Anareli Quintero-Jiménez
- División de Estudios de Posgrado e Investigación, Tecnológico Nacional de México/I.T. Roque, Km. 8 Carretera Celaya-Juventino Rosas, Roque, Celaya 38110, Guanajato, Mexico
| | - Gabriel Iturriaga
- División de Estudios de Posgrado e Investigación, Tecnológico Nacional de México/I.T. Roque, Km. 8 Carretera Celaya-Juventino Rosas, Roque, Celaya 38110, Guanajato, Mexico
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13
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Wei MY, Li H, Zhang LD, Guo ZJ, Liu JY, Ding QS, Zhong YH, Li J, Ma DN, Zheng HL. Exogenous hydrogen sulfide mediates Na+ and K+ fluxes of salt gland in salt-secreting mangrove plant Avicennia marina. TREE PHYSIOLOGY 2022; 42:1812-1826. [PMID: 35412618 DOI: 10.1093/treephys/tpac042] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Accepted: 04/03/2022] [Indexed: 05/26/2023]
Abstract
Hydrogen sulfide (H2S), is a crucial biological player in plants. Here, we primarily explored the interaction between sodium hydrosulfide (NaHS, a H2S donor) and the fluxes of Na+ and K+ from the salt glands of mangrove species Avicennia marina (Forsk.) Vierh. with non-invasive micro-test technology (NMT) and quantitative real-time PCR (qRT-PCR) approaches under salinity treatments. The results showed that under 400-mM NaCl treatment, the addition of 200-μM NaHS markedly increased the quantity of salt crystals in the adaxial epidermis of A. marina leaves, accompanied by an increase in the K+/Na+ ratio. Meanwhile, the endogenous content of H2S was dramatically elevated in this process. The NMT result revealed that the Na+ efflux was increased from salt glands, whereas K+ efflux was decreased with NaHS application. On the contrary, the effects of NaHS were reversed by H2S scavenger hypotaurine (HT), and DL-propargylglycine (PAG), an inhibitor of cystathionine-γ-lyase (CES, a H2S synthase). Moreover, enzymic assay revealed that NaHS increased the activities of plasma membrane and tonoplast H+-ATPase. qRT-PCR analysis revealed that NaHS significantly increased the genes transcript levels of tonoplast Na+/H+ antiporter (NHX1), plasma membrane Na+/H+ antiporter (SOS1), plasma membrane H+-ATPase (AHA1) and tonoplast H+-ATPase subunit c (VHA-c1), while suppressed above-mentioned gene expressions by the application of HT and PAG. Overall, H2S promotes Na+ secretion from the salt glands of A. marina by up-regulating the plasma membrane and tonoplast Na+/H+ antiporter and H+-ATPase.
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Affiliation(s)
- Ming-Yue Wei
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Huan Li
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
- College of Food and Bio-engineering, Bengbu University, Caoshan Road, Bengbu, Anhui 233030, P.R. China
| | - Lu-Dan Zhang
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Ze-Jun Guo
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Ji-Yun Liu
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Qian-Su Ding
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - You-Hui Zhong
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Jing Li
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Dong-Na Ma
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
| | - Hai-Lei Zheng
- Key Laboratory for Subtropical Wetland Ecosystem Research of MOE, College of the Environment and Ecology, Xiamen University, Xiang'an South Road, Xiamen, Fujian 361005, P.R. China
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14
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Guo Q, Liu L, Rupasinghe TWT, Roessner U, Barkla BJ. Salt stress alters membrane lipid content and lipid biosynthesis pathways in the plasma membrane and tonoplast. PLANT PHYSIOLOGY 2022; 189:805-826. [PMID: 35289902 PMCID: PMC9157097 DOI: 10.1093/plphys/kiac123] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 02/22/2022] [Indexed: 05/25/2023]
Abstract
Plant cell membranes are the sites of sensing and initiation of rapid responses to changing environmental factors including salinity stress. Understanding the mechanisms involved in membrane remodeling is important for studying salt tolerance in plants. This task remains challenging in complex tissue due to suboptimal subcellular membrane isolation techniques. Here, we capitalized on the use of a surface charge-based separation method, free flow electrophoresis, to isolate the tonoplast (TP) and plasma membrane (PM) from leaf tissue of the halophyte ice plant (Mesembryanthemum crystallinum L.). Results demonstrated a membrane-specific lipidomic remodeling in this plant under salt conditions, including an increased proportion of bilayer forming lipid phosphatidylcholine in the TP and an increase in nonbilayer forming and negatively charged lipids (phosphatidylethanolamine and phosphatidylserine) in the PM. Quantitative proteomics showed salt-induced changes in proteins involved in fatty acid synthesis and desaturation, glycerolipid, and sterol synthesis, as well as proteins involved in lipid signaling, binding, and trafficking. These results reveal an essential plant mechanism for membrane homeostasis wherein lipidome remodeling in response to salt stress contributes to maintaining the physiological function of individual subcellular compartments.
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Affiliation(s)
- Qi Guo
- Faculty of Science and Engineering, Southern Cross Plant Science, Southern Cross University, Lismore, NSW 2480, Australia
| | - Lei Liu
- Faculty of Science and Engineering, Southern Cross Plant Science, Southern Cross University, Lismore, NSW 2480, Australia
| | - Thusitha W T Rupasinghe
- School of BioSciences, The University of Melbourne, Parkville 3010, Australia
- Sciex, Mulgrave, VIC 3170, Australia
| | - Ute Roessner
- School of BioSciences, The University of Melbourne, Parkville 3010, Australia
| | - Bronwyn J Barkla
- Faculty of Science and Engineering, Southern Cross Plant Science, Southern Cross University, Lismore, NSW 2480, Australia
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15
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Elnaggar A, Mosa KA, Ramamoorthy K, El-Keblawy A, Navarro T, Soliman SSM. De novo transcriptome sequencing, assembly, and gene expression profiling of a salt-stressed halophyte (Salsola drummondii) from a saline habitat. PHYSIOLOGIA PLANTARUM 2021; 173:1695-1714. [PMID: 34741316 DOI: 10.1111/ppl.13591] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2021] [Revised: 09/30/2021] [Accepted: 11/04/2021] [Indexed: 06/13/2023]
Abstract
Salsola drummondii is a perennial habitat-indifferent halophyte growing in saline and nonsaline habitats of the Arabian hyperarid deserts. It offers an invaluable opportunity to examine the molecular mechanisms of salt tolerance. The present study was conducted to elucidate these mechanisms through transcriptome profiling of seedlings grown from seeds collected in a saline habitat. The Illumina Hiseq 2500 platform was employed to sequence cDNA libraries prepared from shoots and roots of nonsaline-treated plants (controls) and plants treated with 1200 mM NaCl. Transcriptomic comparison between salt-treated and control samples resulted in 17,363 differentially expressed genes (DEGs), including 12,000 upregulated genes (7870 in roots, 4130 in shoots) and 5363 downregulated genes (4258 in roots and 1105 in shoots). The majority of identified DEGs are known to be involved in transcription regulation (79), signal transduction (82), defense metabolism (101), transportation (410), cell wall metabolism (27), regulatory processes (392), respiration (85), chaperoning (9), and ubiquitination (98) during salt tolerance. This study identified potential genes associated with the salt tolerance of S. drummondii and demonstrated that this tolerance may depend on the induction of certain genes in shoot and root tissues. These gene expressions were validated using reverse-transcription quantitative PCR, the results of which were consistent with transcriptomics results. To the best of our knowledge, this is the first study providing genetic information on salt tolerance mechanisms in S. drummondii.
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Affiliation(s)
- Attiat Elnaggar
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah, UAE
- Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria, Egypt
- Departmento de Botanica y Fisiologia Vegetal, Universidad de Málaga, Málaga, Spain
| | - Kareem A Mosa
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah, UAE
- Department of Biotechnology, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Kalidoss Ramamoorthy
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah, UAE
| | - Ali El-Keblawy
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah, UAE
- Department of Biology, Faculty of Science, Al-Arish University, Egypt
| | - Teresa Navarro
- Departmento de Botanica y Fisiologia Vegetal, Universidad de Málaga, Málaga, Spain
| | - Sameh S M Soliman
- Department of Medicinal Chemistry, College of Pharmacy, University of Sharjah, Sharjah, UAE
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16
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Otterbach SL, Khoury H, Rupasinghe T, Mendis H, Kwan KH, Lui V, Natera SHA, Klaiber I, Allen NM, Jarvis DE, Tester M, Roessner U, Schmöckel SM. Characterization of epidermal bladder cells in Chenopodium quinoa. PLANT, CELL & ENVIRONMENT 2021; 44:3606-3622. [PMID: 34510479 DOI: 10.1111/pce.14181] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 08/01/2021] [Accepted: 08/23/2021] [Indexed: 06/13/2023]
Abstract
Chenopodium quinoa (quinoa) is considered a superfood with its favourable nutrient composition and being gluten free. Quinoa has high tolerance to abiotic stresses, such as salinity, water deficit (drought) and cold. The tolerance mechanisms are yet to be elucidated. Quinoa has epidermal bladder cells (EBCs) that densely cover the shoot surface, particularly the younger parts of the plant. Here, we report on the EBC's primary and secondary metabolomes, as well as the lipidome in control conditions and in response to abiotic stresses. EBCs were isolated from plants after cold, heat, high-light, water deficit and salt treatments. We used untargeted gas chromatography-mass spectrometry (GC-MS) to analyse metabolites and untargeted and targeted liquid chromatography-MS (LC-MS) for lipids and secondary metabolite analyses. We identified 64 primary metabolites, including sugars, organic acids and amino acids, 19 secondary metabolites, including phenolic compounds, betanin and saponins and 240 lipids categorized in five groups including glycerolipids and phospholipids. We found only few changes in the metabolic composition of EBCs in response to abiotic stresses; these were metabolites related with heat, cold and high-light treatments but not salt stress. Na+ concentrations were low in EBCs with all treatments and approximately two orders of magnitude lower than K+ concentrations.
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Affiliation(s)
- Sophie L Otterbach
- Department Physiology of Yield Stability, Institute Crop Science, Faculty of Agriculture, University of Hohenheim, Stuttgart, Germany
| | - Holly Khoury
- School of BioSciences, The University of Melbourne, Parkville, Victoria, Australia
| | - Thusitha Rupasinghe
- School of BioSciences, The University of Melbourne, Parkville, Victoria, Australia
| | - Himasha Mendis
- School of BioSciences, The University of Melbourne, Parkville, Victoria, Australia
| | - Kim H Kwan
- Metabolomics Australia, The University of Melbourne, Parkville, Victoria, Australia
| | - Veronica Lui
- Metabolomics Australia, The University of Melbourne, Parkville, Victoria, Australia
| | - Siria H A Natera
- Metabolomics Australia, The University of Melbourne, Parkville, Victoria, Australia
| | - Iris Klaiber
- Core Facility Hohenheim (640). Mass Spectrometry Unit, University of Hohenheim, Stuttgart, Germany
| | - Nathaniel M Allen
- Department Physiology of Yield Stability, Institute Crop Science, Faculty of Agriculture, University of Hohenheim, Stuttgart, Germany
| | - David E Jarvis
- Department of Plant and Wildlife Sciences, College of Life Sciences, Brigham Young University, Provo, Utah, USA
| | - Mark Tester
- Center for Desert Agriculture, Biological and Environmental Sciences and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia
| | - Ute Roessner
- School of BioSciences, The University of Melbourne, Parkville, Victoria, Australia
| | - Sandra M Schmöckel
- Department Physiology of Yield Stability, Institute Crop Science, Faculty of Agriculture, University of Hohenheim, Stuttgart, Germany
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17
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Hu Z, Nie Z, Yan C, Huang H, Ma X, Wang Y, Ye N, Tuskan GA, Yang X, Yin H. Transcriptome and Degradome Profiling Reveals a Role of miR530 in the Circadian Regulation of Gene Expression in Kalanchoë marnieriana. Cells 2021; 10:1526. [PMID: 34204368 PMCID: PMC8233840 DOI: 10.3390/cells10061526] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Revised: 06/09/2021] [Accepted: 06/13/2021] [Indexed: 11/16/2022] Open
Abstract
Crassulacean acid metabolism (CAM) is an important photosynthetic pathway for plant adaptation to dry environments. CAM plants feature a coordinated interaction between mesophyll and epidermis functions that involves refined regulations of gene expression. Plant microRNAs (miRNAs) are crucial post-transcription regulators of gene expression, however, their roles underlying the CAM pathway remain poorly investigated. Here, we present a study characterizing the expression of miRNAs in an obligate CAM species Kalanchoë marnieriana. Through sequencing of transcriptome and degradome in mesophyll and epidermal tissues under the drought treatments, we identified differentially expressed miRNAs that were potentially involved in the regulation of CAM. In total, we obtained 84 miRNA genes, and eight of them were determined to be Kalanchoë-specific miRNAs. It is widely accepted that CAM pathway is regulated by circadian clock. We showed that miR530 was substantially downregulated in epidermal peels under drought conditions; miR530 targeted two tandem zinc knuckle/PLU3 domain encoding genes (TZPs) that were potentially involved in light signaling and circadian clock pathways. Our work suggests that the miR530-TZPs module might play a role of regulating CAM-related gene expression in Kalanchoë.
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Affiliation(s)
- Zhikang Hu
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China; (Z.H.); (Z.N.); (H.H.); (X.M.)
- College of Information Science and Technology, Nanjing Forestry University, Nanjing 210037, China; (Y.W.); (N.Y.)
- Key Laboratory of Forest Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China
| | - Ziyan Nie
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China; (Z.H.); (Z.N.); (H.H.); (X.M.)
- Key Laboratory of Forest Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China
| | - Chao Yan
- Experimental Center for Subtropical Forestry, Chinese Academy of Forestry, Fenyi 336600, China;
| | - Hu Huang
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China; (Z.H.); (Z.N.); (H.H.); (X.M.)
- College of Information Science and Technology, Nanjing Forestry University, Nanjing 210037, China; (Y.W.); (N.Y.)
| | - Xianjin Ma
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China; (Z.H.); (Z.N.); (H.H.); (X.M.)
- College of Information Science and Technology, Nanjing Forestry University, Nanjing 210037, China; (Y.W.); (N.Y.)
| | - Yupeng Wang
- College of Information Science and Technology, Nanjing Forestry University, Nanjing 210037, China; (Y.W.); (N.Y.)
| | - Ning Ye
- College of Information Science and Technology, Nanjing Forestry University, Nanjing 210037, China; (Y.W.); (N.Y.)
| | - Gerald A. Tuskan
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37830, USA; (G.A.T.); (X.Y.)
- DOE-Center for Bioenergy Innovation (CBI), Oak Ridge National Laboratory, Oak Ridge, TN 37830, USA
| | - Xiaohan Yang
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37830, USA; (G.A.T.); (X.Y.)
- DOE-Center for Bioenergy Innovation (CBI), Oak Ridge National Laboratory, Oak Ridge, TN 37830, USA
| | - Hengfu Yin
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China; (Z.H.); (Z.N.); (H.H.); (X.M.)
- Key Laboratory of Forest Genetics and Breeding, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou 311400, China
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18
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Proteomics of Homeobox7 Enhanced Salt Tolerance in Mesembryanthemum crystallinum. Int J Mol Sci 2021; 22:ijms22126390. [PMID: 34203768 PMCID: PMC8232686 DOI: 10.3390/ijms22126390] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 06/11/2021] [Accepted: 06/13/2021] [Indexed: 11/17/2022] Open
Abstract
Mesembryanthemum crystallinum (common ice plant) is a halophyte species that has adapted to extreme conditions. In this study, we cloned a McHB7 transcription factor gene from the ice plant. The expression of McHB7 was significantly induced by 500 mM NaCl and it reached the peak under salt treatment for 7 days. The McHB7 protein was targeted to the nucleus. McHB7-overexpressing in ice plant leaves through Agrobacterium-mediated transformation led to 25 times more McHB7 transcripts than the non-transformed wild type (WT). After 500 mM NaCl treatment for 7 days, the activities of superoxide dismutase (SOD) and peroxidase (POD) and water content of the transgenic plants were higher than the WT, while malondialdehyde (MDA) was decreased in the transgenic plants. A total of 1082 and 1072 proteins were profiled by proteomics under control and salt treatment, respectively, with 22 and 11 proteins uniquely identified under control and salt stress, respectively. Among the 11 proteins, 7 were increased and 4 were decreased after salt treatment. Most of the proteins whose expression increased in the McHB7 overexpression (OE) ice plants under high salinity were involved in transport regulation, catalytic activities, biosynthesis of secondary metabolites, and response to stimulus. The results demonstrate that the McHB7 transcription factor plays a positive role in improving plant salt tolerance.
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19
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Zhang S, Quartararo A, Betz OK, Madahhosseini S, Heringer AS, Le T, Shao Y, Caruso T, Ferguson L, Jernstedt J, Wilkop T, Drakakaki G. Root vacuolar sequestration and suberization are prominent responses of Pistacia spp. rootstocks during salinity stress. PLANT DIRECT 2021; 5:e00315. [PMID: 34027297 PMCID: PMC8133763 DOI: 10.1002/pld3.315] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Revised: 02/15/2021] [Accepted: 02/27/2021] [Indexed: 05/11/2023]
Abstract
Understanding the mechanisms of stress tolerance in diverse species is needed to enhance crop performance under conditions such as high salinity. Plant roots, in particular in grafted agricultural crops, can function as a boundary against external stresses in order to maintain plant fitness. However, limited information exists for salinity stress responses of woody species and their rootstocks. Pistachio (Pistacia spp.) is a tree nut crop with relatively high salinity tolerance as well as high genetic heterogeneity. In this study, we used a microscopy-based approach to investigate the cellular and structural responses to salinity stress in the roots of two pistachio rootstocks, Pistacia integerrima (PGI) and a hybrid, P. atlantica x P. integerrima (UCB1). We analyzed root sections via fluorescence microscopy across a developmental gradient, defined by xylem development, for sodium localization and for cellular barrier differentiation via suberin deposition. Our cumulative data suggest that the salinity response in pistachio rootstock species is associated with both vacuolar sodium ion (Na+) sequestration in the root cortex and increased suberin deposition at apoplastic barriers. Furthermore, both vacuolar sequestration and suberin deposition correlate with the root developmental gradient. We observed a higher rate of Na+ vacuolar sequestration and reduced salt-induced leaf damage in UCB1 when compared to P. integerrima. In addition, UCB1 displayed higher basal levels of suberization, in both the exodermis and endodermis, compared to P. integerrima. This difference was enhanced after salinity stress. These cellular characteristics are phenotypes that can be taken into account during screening for sodium-mediated salinity tolerance in woody plant species.
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Affiliation(s)
- Shuxiao Zhang
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
| | - Alessandra Quartararo
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
- Department of Agricultural & Forest ScienceUniversity of PalermoViale delle ScienzePalermoItaly
| | - Oliver Karl Betz
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
| | - Shahab Madahhosseini
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
- Present address:
Genetic and Plant Production DepartmentVali‐e‐Asr University of RafsanjanRafsanjanIran
| | - Angelo Schuabb Heringer
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
- Present address:
Unidade de Biologia IntegrativaSetor de Genômica e ProteômicaUENFRio de JaneiroRJBrazil
| | - Thu Le
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
| | - Yuhang Shao
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
- Present address:
Key Laboratory of Crop Physiology Ecology and Production Management of Ministry of AgricultureNanjing Agricultural UniversityNanjingJiangsu ProvinceP. R. China
| | - Tiziano Caruso
- Department of Agricultural & Forest ScienceUniversity of PalermoViale delle ScienzePalermoItaly
| | - Louise Ferguson
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
| | - Judy Jernstedt
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
| | - Thomas Wilkop
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
- Light Microscopy CoreDepartment of PhysiologyUniversity of KentuckyLexingtonKYUSA
| | - Georgia Drakakaki
- Department of Plant SciencesUniversity of California DavisDavisCAUSA
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20
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Pantha P, Chalivendra S, Oh DH, Elderd BD, Dassanayake M. A Tale of Two Transcriptomic Responses in Agricultural Pests via Host Defenses and Viral Replication. Int J Mol Sci 2021; 22:3568. [PMID: 33808210 PMCID: PMC8037200 DOI: 10.3390/ijms22073568] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 03/26/2021] [Accepted: 03/26/2021] [Indexed: 01/02/2023] Open
Abstract
Autographa californica Multiple Nucleopolyhedrovirus (AcMNPV) is a baculovirus that causes systemic infections in many arthropod pests. The specific molecular processes underlying the biocidal activity of AcMNPV on its insect hosts are largely unknown. We describe the transcriptional responses in two major pests, Spodoptera frugiperda (fall armyworm) and Trichoplusia ni (cabbage looper), to determine the host-pathogen responses during systemic infection, concurrently with the viral response to the host. We assembled species-specific transcriptomes of the hemolymph to identify host transcriptional responses during systemic infection and assessed the viral transcript abundance in infected hemolymph from both species. We found transcriptional suppression of chitin metabolism and tracheal development in infected hosts. Synergistic transcriptional support was observed to suggest suppression of immune responses and induction of oxidative stress indicating disease progression in the host. The entire AcMNPV core genome was expressed in the infected host hemolymph with a proportional high abundance detected for viral transcripts associated with replication, structure, and movement. Interestingly, several of the host genes that were targeted by AcMNPV as revealed by our study are also targets of chemical insecticides currently used commercially to control arthropod pests. Our results reveal an extensive overlap between biological processes represented by transcriptional responses in both hosts, as well as convergence on highly abundant viral genes expressed in the two hosts, providing an overview of the host-pathogen transcriptomic landscape during systemic infection.
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Affiliation(s)
| | | | | | - Bret D. Elderd
- Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA; (P.P.); (S.C.); (D.-H.O.)
| | - Maheshi Dassanayake
- Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA; (P.P.); (S.C.); (D.-H.O.)
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21
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Lu C, Yuan F, Guo J, Han G, Wang C, Chen M, Wang B. Current Understanding of Role of Vesicular Transport in Salt Secretion by Salt Glands in Recretohalophytes. Int J Mol Sci 2021; 22:2203. [PMID: 33672188 PMCID: PMC7926375 DOI: 10.3390/ijms22042203] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 02/17/2021] [Accepted: 02/19/2021] [Indexed: 12/18/2022] Open
Abstract
Soil salinization is a serious and growing problem around the world. Some plants, recognized as the recretohalophytes, can normally grow on saline-alkali soil without adverse effects by secreting excessive salt out of the body. The elucidation of the salt secretion process is of great significance for understanding the salt tolerance mechanism adopted by the recretohalophytes. Between the 1950s and the 1970s, three hypotheses, including the osmotic potential hypothesis, the transfer system similar to liquid flow in animals, and vesicle-mediated exocytosis, were proposed to explain the salt secretion process of plant salt glands. More recently, increasing evidence has indicated that vesicular transport plays vital roles in salt secretion of recretohalophytes. Here, we summarize recent findings, especially regarding the molecular evidence on the functional roles of vesicular trafficking in the salt secretion process of plant salt glands. A model of salt secretion in salt gland is also proposed.
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Affiliation(s)
| | | | | | | | | | | | - Baoshan Wang
- Shandong Provincial Key Laboratory of Plant Stress Research, College of Life Sciences, Shandong Normal University, Jinan 250014, China; (C.L.); (F.Y.); (J.G.); (G.H.); (C.W.); (M.C.)
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22
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Zhou Y, Karl T, Lewis DH, McGhie TK, Arathoon S, Davies KM, Ryan KG, Gould KS, Schwinn KE. Production of Betacyanins in Transgenic Nicotiana tabacum Increases Tolerance to Salinity. FRONTIERS IN PLANT SCIENCE 2021; 12:653147. [PMID: 33995448 PMCID: PMC8121086 DOI: 10.3389/fpls.2021.653147] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2021] [Accepted: 04/09/2021] [Indexed: 05/03/2023]
Abstract
Although red betalain pigments (betacyanins) have been associated with salinity tolerance in some halophytes like Disphyma australe, efforts to determine whether they have a causal role and the underlying mechanisms have been hampered by a lack of a model system. To address this, we engineered betalain-producing Nicotiana tabacum, by the introduction of three betalain biosynthetic genes. The plants were violet-red due to the accumulation of three betacyanins: betanin, isobetanin, and betanidin. Under salt stress, betacyanic seedlings had increased survivability and leaves of mature plants had higher photochemical quantum yields of photosystem II (F v /F m ) and faster photosynthetic recovery after saturating light treatment. Under salt stress, compared to controls betacyanic leaf disks had no loss of carotenoids, a slower rate of chlorophyll degradation, and higher F v /F m values. Furthermore, simulation of betacyanin pigmentation by using a red filter cover improved F v /F m value of green tissue under salt stress. Our results confirm a direct causal role of betacyanins in plant salinity tolerance and indicate a key mechanism is photoprotection. A role in delaying leaf senescence was also indicated, and the enhanced antioxidant capability of the betacyanic leaves suggested a potential contribution to scavenging reactive oxygen species. The study can inform the development of novel biotechnological approaches to improving agricultural productivity in saline-affected areas.
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Affiliation(s)
- Yanfei Zhou
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Tanja Karl
- School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand
| | - David H. Lewis
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Tony K. McGhie
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Steve Arathoon
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Kevin M. Davies
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
| | - Ken G. Ryan
- School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand
| | - Kevin S. Gould
- School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand
| | - Kathy E. Schwinn
- The New Zealand Institute for Plant and Food Research Limited, Palmerston North, New Zealand
- *Correspondence: Kathy E. Schwinn,
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23
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Guan Q, Kong W, Zhu D, Zhu W, Dufresne C, Tian J, Chen S. Comparative proteomics of Mesembryanthemum crystallinum guard cells and mesophyll cells in transition from C 3 to CAM. J Proteomics 2020; 231:104019. [PMID: 33075550 DOI: 10.1016/j.jprot.2020.104019] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Revised: 09/18/2020] [Accepted: 10/12/2020] [Indexed: 11/18/2022]
Abstract
Salinity can induce Mesembryanthemum crystallinum to shift its photosynthesis from C3 to crassulacean acid metabolism (CAM), leading to enhanced plant water use efficiency. Studying how M. crystallinum changes its carbon fixation pathways is important for potential translation into crops and enhancing crop resilience. In this study, we examined proteomic changes in guard cells and mesophyll cells in the course of the C3 to CAM transition. We collected enriched guard cells and mesophyll cells during a short period of transition. A total of 1153 proteins were identified and quantified in the two cell-types. During the transition, proteins in the guard cells and mesophyll cells exhibited differential changes. For example, we observed nocturnal carbon fixation in mesophyll cells and proteins involved in cell growth in the two cell-types. Proteins involved in osmotic adjustment, ion transport, energy metabolism and light response may play important roles in the C3 to CAM transition. Real-time PCR experiments were conducted to determine potential correlations between transcript and protein levels. These results have highlighted potential molecular mechanisms underlying the C3 to CAM transition of guard cells and mesophyll cells of the important facultative CAM plant. BIOLOGICAL SIGNIFICANCE: Fresh water resource for agricultural food production is a global challenge. Nature has evolved crassulacean acid metabolism (CAM) plants with enhanced water use efficiency. Using single cell-type proteomics, this study revealed molecular changes taking place in guard cells and mesophyll cells during the shift of ice plant photosynthesis from C3 to CAM. The results have provided important insights into the CAM transition and may facilitate effort toward enhancing crop resilience for global food security.
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Affiliation(s)
- Qijie Guan
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China; Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA
| | - Wenwen Kong
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA; Guangdong Province Key Laboratory for Plant Epigenetics, College of Life Science and Oceanography, Shenzhen University, 518060 Shenzhen, China
| | - Dan Zhu
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA; College of Life Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Wei Zhu
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China; Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA
| | - Craig Dufresne
- Thermo Scientific Training Institute, West Palm Beach, FL 33402, USA
| | - Jingkui Tian
- College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310027, China; Key Lab for Biomedical Engineering of Ministry of Education, Zhejiang University, Hangzhou 310027, China; Zhejiang-Malaysia Joint Research Center for Traditional Medicine, Zhejiang University, Hangzhou 310027, China.
| | - Sixue Chen
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA.
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24
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Boulc'h PN, Caullireau E, Faucher E, Gouerou M, Guérin A, Miray R, Couée I. Abiotic stress signalling in extremophile land plants. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:5771-5785. [PMID: 32687568 DOI: 10.1093/jxb/eraa336] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 07/14/2020] [Indexed: 06/11/2023]
Abstract
Plant life relies on complex arrays of environmental stress sensing and signalling mechanisms. Extremophile plants develop and grow in harsh environments with extremes of cold, heat, drought, desiccation, or salinity, which have resulted in original adaptations. In accordance with their polyphyletic origins, extremophile plants likely possess core mechanisms of plant abiotic stress signalling. However, novel properties or regulations may have emerged in the context of extremophile adaptations. Comparative omics of extremophile genetic models, such as Arabidopsis lyrata, Craterostigma plantagineum, Eutrema salsugineum, and Physcomitrella patens, reveal diverse strategies of sensing and signalling that lead to a general improvement in abiotic stress responses. Current research points to putative differences of sensing and emphasizes significant modifications of regulatory mechanisms, at the level of secondary messengers (Ca2+, phospholipids, reactive oxygen species), signal transduction (intracellular sensors, protein kinases, transcription factors, ubiquitin-mediated proteolysis) or signalling crosstalk. Involvement of hormone signalling, especially ABA signalling, cell homeostasis surveillance, and epigenetic mechanisms, also shows that large-scale gene regulation, whole-plant integration, and probably stress memory are important features of adaptation to extreme conditions. This evolutionary and functional plasticity of signalling systems in extremophile plants may have important implications for plant biotechnology, crop improvement, and ecological risk assessment under conditions of climate change.
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Affiliation(s)
- Pierre-Nicolas Boulc'h
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
| | - Emma Caullireau
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
| | - Elvina Faucher
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
| | - Maverick Gouerou
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
- University of Rennes 1, CNRS, ECOBIO (Ecosystems-Biodiversity-Evolution) - UMR, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
| | - Amandine Guérin
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
| | - Romane Miray
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
| | - Ivan Couée
- University of Rennes 1, Department of Life Sciences and Environment, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
- University of Rennes 1, CNRS, ECOBIO (Ecosystems-Biodiversity-Evolution) - UMR, Campus de Beaulieu, avenue du Général Leclerc, Rennes, France
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25
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Imamura T, Yasui Y, Koga H, Takagi H, Abe A, Nishizawa K, Mizuno N, Ohki S, Mizukoshi H, Mori M. A novel WD40-repeat protein involved in formation of epidermal bladder cells in the halophyte quinoa. Commun Biol 2020; 3:513. [PMID: 32943738 PMCID: PMC7498606 DOI: 10.1038/s42003-020-01249-w] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Accepted: 08/25/2020] [Indexed: 12/19/2022] Open
Abstract
Halophytes are plants that grow in high-salt environments and form characteristic epidermal bladder cells (EBCs) that are important for saline tolerance. To date, however, little has been revealed about the formation of these structures. To determine the genetic basis for their formation, we applied ethylmethanesulfonate mutagenesis and obtained two mutants with reduced levels of EBCs (rebc) and abnormal chloroplasts. In silico subtraction experiments revealed that the rebc phenotype was caused by mutation of REBC, which encodes a WD40 protein that localizes to the nucleus and chloroplasts. Phylogenetic and transformant analyses revealed that the REBC protein differs from TTG1, a WD40 protein involved in trichome formation. Furthermore, rebc mutants displayed damage to their shoot apices under abiotic stress, suggesting that EBCs may protect the shoot apex from such stress. These findings will help clarify the mechanisms underlying EBC formation and function.
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Affiliation(s)
- Tomohiro Imamura
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa, 921-8836, Japan.
| | - Yasuo Yasui
- Graduate School of Agriculture, Kyoto University, Sakyo-Ku, Kyoto, 606-8502, Japan
| | - Hironori Koga
- Department of Bioproduction Science, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa, 921-8836, Japan
| | - Hiroki Takagi
- Department of Bioproduction Science, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa, 921-8836, Japan
| | - Akira Abe
- Iwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate, 024-0003, Japan
| | - Kanako Nishizawa
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa, 921-8836, Japan
| | - Nobuyuki Mizuno
- Graduate School of Agriculture, Kyoto University, Sakyo-Ku, Kyoto, 606-8502, Japan
| | - Shinya Ohki
- Center for Nano Materials and Technology (CNMT), Japan Advanced Institute of Science and Technology (JAIST), 1-1 Asahidai, Nomi-Shi, Ishikawa, 923-1292, Japan
| | - Hiroharu Mizukoshi
- Technology Development Group, Actree Co., 375 Misumimachi, Hakusan, Ishikawa, 924-0053, Japan
| | - Masashi Mori
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 308-1, Nonoichi, Ishikawa, 921-8836, Japan.
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26
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Kong W, Yoo MJ, Zhu D, Noble JD, Kelley TM, Li J, Kirst M, Assmann SM, Chen S. Molecular changes in Mesembryanthemum crystallinum guard cells underlying the C 3 to CAM transition. PLANT MOLECULAR BIOLOGY 2020; 103:653-667. [PMID: 32468353 DOI: 10.1007/s11103-020-01016-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 05/17/2020] [Indexed: 05/14/2023]
Abstract
KEY MESSAGE: The timing and transcriptomic changes during the C3 to CAM transition of common ice plant support the notion that guard cells themselves can shift from C3 to CAM. Crassulacean acid metabolism (CAM) is a specialized type of photosynthesis: stomata close during the day, enhancing water conservation, and open at night, allowing CO2 uptake. Mesembryanthemum crystallinum (common ice plant) is a facultative CAM species that can shift from C3 photosynthesis to CAM under salt or drought stresses. However, the molecular mechanisms underlying the stress induced transition from C3 to CAM remain unknown. Here we determined the transition time from C3 to CAM in M. crystallinum under salt stress. In parallel, single-cell-type transcriptomic profiling by 3'-mRNA sequencing was conducted in isolated stomatal guard cells to determine the molecular changes in this key cell type during the transition. In total, 495 transcripts showed differential expression between control and salt-treated samples during the transition, including 285 known guard cell genes, seven CAM-related genes, 18 transcription factors, and 185 other genes previously not found to be expressed in guard cells. PEPC1 and PPCK1, which encode key enzymes of CAM photosynthesis, were up-regulated in guard cells after seven days of salt treatment, indicating that guard cells themselves can shift from C3 to CAM. This study provides important information towards introducing CAM stomatal behavior into C3 crops to enhance water use efficiency.
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Affiliation(s)
- Wenwen Kong
- College of Life Sciences, Northeast Agricultural University, Harbin, China
- Department of Biology, Genetics Institute, University of Florida (UF), Gainesville, FL, USA
- Guangdong Province Key Laboratory for Plant Epigenetics, College of Life Science and Oceanography, Shenzhen University, Shenzhen, China
| | - Mi-Jeong Yoo
- Department of Biology, Genetics Institute, University of Florida (UF), Gainesville, FL, USA
| | - Dan Zhu
- Department of Biology, Genetics Institute, University of Florida (UF), Gainesville, FL, USA
- College of Life Science, Key Lab of Plant Biotechnology in Universities of Shandong Province, Qingdao Agricultural University, Qingdao, China
| | - Jerald D Noble
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL, USA
| | - Theresa M Kelley
- Department of Biology, Genetics Institute, University of Florida (UF), Gainesville, FL, USA
| | - Jing Li
- College of Life Sciences, Northeast Agricultural University, Harbin, China
| | - Matias Kirst
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL, USA.
| | - Sarah M Assmann
- Department of Biology, Pennsylvania State University, University Park, PA, USA.
| | - Sixue Chen
- Department of Biology, Genetics Institute, University of Florida (UF), Gainesville, FL, USA.
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27
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Castañeda-Loaiza V, Oliveira M, Santos T, Schüler L, Lima AR, Gama F, Salazar M, Neng NR, Nogueira JMF, Varela J, Barreira L. Wild vs cultivated halophytes: Nutritional and functional differences. Food Chem 2020; 333:127536. [PMID: 32707417 DOI: 10.1016/j.foodchem.2020.127536] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 06/19/2020] [Accepted: 07/06/2020] [Indexed: 02/01/2023]
Abstract
Some halophyte plants are currently used in gourmet cuisine due to their unique organoleptic properties. Moreover, they exhibit excellent nutritional and functional properties, being rich in polyphenolics and vitamins. These compounds are associated to strong antioxidant activity and enhanced health benefits. This work compared the nutritional properties and antioxidant potential of three species (Mesembryanthemum nodiflorum, Suaeda maritima and Sarcocornia fruticosa) collected in saltmarshes from Portugal and Spain with those of cultivated plants. The latter were generally more succulent and had higher contents of minerals than plants obtained from the wild and contained less fibre. All species assayed are a good source of proteins, fibres and minerals. Additionally, they are good sources of carotenoids and vitamins A, C and B6 and showed good antioxidant potential particularly S. maritima. Chromatographic analysis of the phenolic profile revealed that ferulic and caffeic acids as the most relevant phenolic compounds detected in the halophytes tested.
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Affiliation(s)
| | - Marta Oliveira
- CCMAR, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Tamára Santos
- CCMAR, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Lisa Schüler
- CCMAR, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Alexandre R Lima
- MED, Mediterranean Institute for Agriculture, Environment and Development, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Florinda Gama
- MED, Mediterranean Institute for Agriculture, Environment and Development, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Miguel Salazar
- Riafresh, Centro Empresarial Gambelas, Pav. E-2, Universidade do Algarve, Campus de Gambelas, 8005-139, Portugal
| | - Nuno R Neng
- Faculty of Sciences of the University of Lisbon, Centre of Chemistry and Biochemistry/Department of Chemistry and Biochemistry, Building C8, Floor 5, Campo Grande, 1749-016 Lisbon, Portugal
| | - J M F Nogueira
- Faculty of Sciences of the University of Lisbon, Centre of Chemistry and Biochemistry/Department of Chemistry and Biochemistry, Building C8, Floor 5, Campo Grande, 1749-016 Lisbon, Portugal
| | - João Varela
- CCMAR, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Luísa Barreira
- CCMAR, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal.
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28
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Zhao C, Zhang H, Song C, Zhu JK, Shabala S. Mechanisms of Plant Responses and Adaptation to Soil Salinity. Innovation (N Y) 2020; 1:100017. [PMID: 34557705 PMCID: PMC8454569 DOI: 10.1016/j.xinn.2020.100017] [Citation(s) in RCA: 276] [Impact Index Per Article: 69.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
Soil salinity is a major environmental stress that restricts the growth and yield of crops. Understanding the physiological, metabolic, and biochemical responses of plants to salt stress and mining the salt tolerance-associated genetic resource in nature will be extremely important for us to cultivate salt-tolerant crops. In this review, we provide a comprehensive summary of the mechanisms of salt stress responses in plants, including salt stress-triggered physiological responses, oxidative stress, salt stress sensing and signaling pathways, organellar stress, ion homeostasis, hormonal and gene expression regulation, metabolic changes, as well as salt tolerance mechanisms in halophytes. Important questions regarding salt tolerance that need to be addressed in the future are discussed.
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Affiliation(s)
- Chunzhao Zhao
- Shanghai Center for Plant Stress Biology and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Heng Zhang
- State Key Laboratory of Plant Molecular Genetics, Shanghai Center for Plant Stress Biology, Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Chunpeng Song
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Jian-Kang Zhu
- Shanghai Center for Plant Stress Biology and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907, USA
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia
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29
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Guo H, Cui YN, Pan YQ, Wang SM, Bao AK. Sodium chloride facilitates the secretohalophyte Atriplex canescens adaptation to drought stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 150:99-108. [PMID: 32135478 DOI: 10.1016/j.plaphy.2020.02.018] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 02/06/2020] [Accepted: 02/12/2020] [Indexed: 06/10/2023]
Abstract
Atriplex canescens is a C4 shrub with excellent adaptation to saline and arid environments. Our previous study showed that the secretion of excessive Na+ into leaf salt bladders is a primary strategy in salt tolerance of A. canescens and external 100 mM NaCl can substantially stimulate its growth. To investigate whether NaCl could facilitate Atriplex canescens response to drought stress, five-week-old seedlings were subjected to drought stress (30% of field water capacity) in the presence or absence of additional 100 mM NaCl. The results showed that, under drought stress, the addition of NaCl could substantially improve the growth of A. canescens by increasing leaf relative water content, enhancing photosynthetic activity and inducing a significant declined leaf osmotic potential (Ψs). The addition of NaCl significantly increased Na+ concentration in leaf salt bladders and the Na+ contribution to leaf Ψs, while had no adverse effects on K+ accumulation in leaf laminae. Therefore, the large accumulation of Na+ in salt bladders for enhancing osmotic adjustment (OA) ability is a vital strategy in A. canescens responding to drought stress. In addition, the concentration of free proline, bataine and soluble sugars exhibited a significant increase in the presence of NaCl under drought stress, and the betaine contribution to leaf Ψs was significantly increased by additional NaCl compared with that under drought treatment alone, suggesting that compatible solutes are also involved in OA in addition to functioning as protectants to alleviate water deficit injury.
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Affiliation(s)
- Huan Guo
- Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, PR China.
| | - Yan-Nong Cui
- Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, PR China.
| | - Ya-Qing Pan
- Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, PR China; School of Agriculture, Ningxia University, Yinchuan, 750021, PR China.
| | - Suo-Min Wang
- Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, PR China.
| | - Ai-Ke Bao
- Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020, PR China.
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30
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Guan Q, Tan B, Kelley TM, Tian J, Chen S. Physiological Changes in Mesembryanthemum crystallinum During the C 3 to CAM Transition Induced by Salt Stress. FRONTIERS IN PLANT SCIENCE 2020; 11:283. [PMID: 32256510 PMCID: PMC7090145 DOI: 10.3389/fpls.2020.00283] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2019] [Accepted: 02/25/2020] [Indexed: 05/27/2023]
Abstract
Salt stress impedes plant growth and development, and leads to yield loss. Recently, a halophyte species Mesembryanthemum crystallinum has become a model to study plant photosynthetic responses to salt stress. It has an adaptive mechanism of shifting from C3 photosynthesis to crassulacean acid metabolism (CAM) photosynthesis under stresses, which greatly enhances water usage efficiency and stress tolerance. In this study, we focused on investigating the morphological and physiological changes [e.g., leaf area, stomatal movement behavior, gas exchange, leaf succulence, and relative water content (RWC)] of M. crystallinum during the C3 to CAM photosynthetic transition under salt stress. Our results showed that in M. crystallinum seedlings, CAM photosynthesis was initiated after 6 days of salt treatment, the transition takes place within a 3-day period, and plants became mostly CAM in 2 weeks. This result defined the transition period of a facultative CAM plant, laid a foundation for future studies on identifying the molecular switches responsible for the transition from C3 to CAM, and contributed to the ultimate goal of engineering CAM characteristics into C3 crops.
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Affiliation(s)
- Qijie Guan
- College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, United States
| | - Bowen Tan
- Department of Biology, University of Florida, Gainesville, FL, United States
| | - Theresa M. Kelley
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, United States
| | - Jingkui Tian
- College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China
- Key Laboratory for Biomedical Engineering of Ministry of Education, College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China
- Zhejiang-Malaysia Joint Research Center for Traditional Medicine, Zhejiang University, Hangzhou, China
| | - Sixue Chen
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, United States
- Proteomics and Mass Spectrometry, Interdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, FL, United States
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31
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He J, Chua EL, Qin L. Drought does not induce crassulacean acid metabolism (CAM) but regulates photosynthesis and enhances nutritional quality of Mesembryanthemum crystallinum. PLoS One 2020; 15:e0229897. [PMID: 32142525 PMCID: PMC7059918 DOI: 10.1371/journal.pone.0229897] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Accepted: 02/14/2020] [Indexed: 11/24/2022] Open
Abstract
Physiology and nutritional quality of a facultative CAM plant Mesembryanthemum crystallinum under drought stress alone are poorly understood. To induce drought, M. crystallinum was cultured aeroponically with different nutrient spraying intervals such as 5, 30, 60 and 240 min. The long spraying interval such as 240 min resulted in lower mass of root and shoot, shorter total root length with less tips and smaller surface area, compared to short interval of 5 min. Grown under the longest spraying interval of 240 min, M. crystallinumalso had significantly higher leaf dry matter content but lower leaf succulence. However, CAM acidity was undetectable for any plants. Although M. crystallinum grown under extended spraying intervals had higher photosynthetic pigments, they utilized lesser light energy and did not dissipate heat as effectively as those grown under 5 min. Compare to other shorter spraying intervals, photosynthetic gas exchange rates were significantly reduced under 240 min spraying interval, indicating signs of water deficit stress. Shoot nitrate, total reduced nitrogen, total soluble protein and Rubisco concentrations were similar for all plants. For phytochemicals and dietary minerals, plants grown under 240 min spraying interval had significantly higher values than the other plants. Therefore, drought does not result in the induction of CAM but regulates photosynthetic performance and enhances nutritional quality of M. crystallinum.
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Affiliation(s)
- Jie He
- National Institute of Education, Nanyang Technological University, Singapore, Singapore
| | - Ee Lyn Chua
- National Institute of Education, Nanyang Technological University, Singapore, Singapore
| | - Lin Qin
- National Institute of Education, Nanyang Technological University, Singapore, Singapore
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32
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Hwang HH, Wang CH, Huang HW, Chiang CP, Chi SF, Huang FC, Yen HE. Functional analysis of McSnRK1 (SNF1-related protein kinase 1) in regulating Na/K homeostasis in transgenic cultured cells and roots of halophyte Mesembryanthemum crystallinum. PLANT CELL REPORTS 2019; 38:915-926. [PMID: 31037366 DOI: 10.1007/s00299-019-02412-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2018] [Accepted: 04/15/2019] [Indexed: 05/05/2023]
Abstract
Transgenic callus and roots of ice plant with altered SnRK1 function were established using Agrobacterium-mediated transformation. The role of McSnRK1 in controlling Na+ influx and Na/K ratio was demonstrated. SnRK1 kinases (SNF1-related protein kinase1) control metabolic adaptation during energy deprivation and regulate protective mechanisms against environmental stress. Yeast SNF1 activates a P-type ATPase, the Na+ exclusion pump, under glucose starvation. The involvement of plant SnRK1 in salt stress response is largely unknown. We previously identified a salt-induced McSnRK1 in the halophyte ice plant (Mesembryanthemum crystallinum). In the current study, the function of McSnRK1 in salt tolerance was analyzed in transgenic cultured cells and roots of ice plant. Ice plant callus constitutively expressed a high level of McSnRK1 and introducing the full-length McSnRK1 did not alter the Na/K ratio at 24 h after 200 mM NaCl treatment. However, interfering with McSnRK1 activity by introducing a truncate McSnRK1 to produce a dominant-negative form of McSnRK1 increased cellular Na+ accumulation and Na/K ratio. As a result, the growth of cultured cells diminished under salt treatment. Hydroponically grown ice plants with roots expressing full-length McSnRK1 had better growth and lowered Na/K ratio compared to the wild-type or vector-only plants. Roots expressing a truncate McSnRK1 had reduced growth and high Na/K ratio under 400 mM NaCl treatment. The changes in Na/K ratio in transgenic cells and whole plants demonstrated the function of SnRK1 in controlling Na+ flux and maintaining Na/K homeostasis under salinity. The Agrobacterium-mediated transformation system could be a versatile tool for functional analysis of genes involved in salt tolerance in the ice plant.
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Affiliation(s)
- Hau-Hsuan Hwang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan
- Ph.D. Program in Microbial Genomics, National Chung Hsing University, Taichung, 40227, Taiwan
- Advanced Plant Biotechnology Center, National Chung Hsing University, Taichung, 40227, Taiwan
- Innovation and Development Center of Sustainable Agriculture, National Chung Hsing University, Taichung, 40227, Taiwan
| | - Chih-Hao Wang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan
| | - Hsiao-Wei Huang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan
| | - Chih-Pin Chiang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan
- Agricultural Biotechnology Research Center, Academia Sinica, Nankang, Taipei, 11529, Taiwan
| | - Shin-Fei Chi
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan
| | - Fan-Chen Huang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan
- Ph.D. Program in Microbial Genomics, National Chung Hsing University and Academia Sinica, Taichung, 40227, Taiwan
| | - Hungchen E Yen
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 40227, Taiwan.
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Rajakani R, Sellamuthu G, V S, S K, Shabala L, Meinke H, Chen Z, Zhou M, Parida A, Shabala S, Venkataraman G. Microhair on the adaxial leaf surface of salt secreting halophytic Oryza coarctata Roxb. show distinct morphotypes: Isolation for molecular and functional analysis. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 285:248-257. [PMID: 31203890 DOI: 10.1016/j.plantsci.2019.05.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Revised: 04/30/2019] [Accepted: 05/02/2019] [Indexed: 06/09/2023]
Abstract
Halophytic Oryza coarctata is a good model system to examine mechanisms of salinity tolerance in rice. O. coarctata leaves show the presence of microhairs in adaxial leaf surface furrows that secrete salt under salinity. However, detailed molecular and physiological studies of O. coarctata microhairs are limited due to their relative inaccessibility. This work presents a detailed characterization of O. coarctata leaf features. O. coarctata has two types of microhairs on the adaxial leaf surface: longer microhairs (three morphotypes) lining epidermal furrow walls and shorter microhairs (reported first time) arising from bulliform cells. Microhair morphotypes include (i) finger-like, tubular structures, (ii) tubular hairs with bilobed and flattened heads and (iii) bi-or trifurcated hairs. The unicellular nature of microhairs was confirmed by propidium iodide (PI) staining. An efficient method for the isolation and enrichment of O. coarctata microhairs is presented (yield averaging ˜2 × 105/g leaf tissue). The robustness of the microhair isolation procedure was confirmed by subsequent viability staining (PI), total RNA isolation and RT-PCR amplification of O. coarctata trichome-specific WUSCHEL-related homeobox 3B (OcWox3B) and transporter gene-specific cDNA sequences. The present microhair isolation work from O. coarctata paves the way for examining genes involved in ion secretion in this halophytic wild rice model.
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Affiliation(s)
- Raja Rajakani
- Plant Molecular Biology Laboratory, M.S. Swaminathan Research Foundation (MSSRF), III Cross Street, Taramani Institutional Area, Chennai, 600 113, India
| | - Gothandapani Sellamuthu
- Plant Molecular Biology Laboratory, M.S. Swaminathan Research Foundation (MSSRF), III Cross Street, Taramani Institutional Area, Chennai, 600 113, India
| | - Saravanakumar V
- Plant Molecular Biology Laboratory, M.S. Swaminathan Research Foundation (MSSRF), III Cross Street, Taramani Institutional Area, Chennai, 600 113, India
| | - Kannappan S
- Plant Molecular Biology Laboratory, M.S. Swaminathan Research Foundation (MSSRF), III Cross Street, Taramani Institutional Area, Chennai, 600 113, India
| | - Lana Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia
| | - Holger Meinke
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia
| | - Zhonghua Chen
- School of Science and Health, Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia
| | - Ajay Parida
- Institute of Life Sciences (ILS), NALCO Square, Bhubaneswar, 751023, Odisha, India
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia.
| | - Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M.S. Swaminathan Research Foundation (MSSRF), III Cross Street, Taramani Institutional Area, Chennai, 600 113, India.
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Guo H, Zhang L, Cui YN, Wang SM, Bao AK. Identification of candidate genes related to salt tolerance of the secretohalophyte Atriplex canescens by transcriptomic analysis. BMC PLANT BIOLOGY 2019; 19:213. [PMID: 31117942 PMCID: PMC6532215 DOI: 10.1186/s12870-019-1827-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Accepted: 05/09/2019] [Indexed: 05/11/2023]
Abstract
BACKGROUND Atriplex canescens is a typical C4 secretohalophyte with salt bladders on the leaves. Accumulating excessive Na+ in tissues and salt bladders, maintaining intracellular K+ homeostasis and increasing leaf organic solutes are crucial for A. canescens survival in harsh saline environments, and enhanced photosynthetic activity and water balance promote its adaptation to salt. However, the molecular basis for these physiological mechanisms is poorly understood. Four-week-old A. canescens seedlings were treated with 100 mM NaCl for 6 and 24 h, and differentially expressed genes in leaves and roots were identified, respectively, with Illumina sequencing. RESULTS In A. canescens treated with 100 mM NaCl, the transcripts of genes encoding transporters/channels for important nutrient elements, which affect growth under salinity, significantly increased, and genes involved in exclusion, uptake and vacuolar compartmentalization of Na+ in leaves might play vital roles in Na+ accumulation in salt bladders. Moreover, NaCl treatment upregulated the transcripts of key genes related to leaf organic osmolytes synthesis, which are conducive to osmotic adjustment. Correspondingly, aquaporin-encoding genes in leaves showed increased transcripts under NaCl treatment, which might facilitate water balance maintenance of A. canescens seedlings in a low water potential condition. Additionally, the transcripts of many genes involved in photosynthetic electron transport and the C4 pathway was rapidly induced, while other genes related to chlorophyll biosynthesis, electron transport and C3 carbon fixation were later upregulated by 100 mM NaCl. CONCLUSIONS We identified many important candidate genes involved in the primary physiological mechanisms of A. canescens salt tolerance. This study provides excellent gene resources for genetic improvement of salt tolerance of important crops and forages.
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Affiliation(s)
- Huan Guo
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020 People’s Republic of China
| | - Le Zhang
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020 People’s Republic of China
| | - Yan-Nong Cui
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020 People’s Republic of China
| | - Suo-Min Wang
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020 People’s Republic of China
| | - Ai-Ke Bao
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730020 People’s Republic of China
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Tay S, He J, Yam TW. CAM plasticity in epiphytic tropical orchid species responding to environmental stress. BOTANICAL STUDIES 2019; 60:7. [PMID: 31087187 PMCID: PMC6513927 DOI: 10.1186/s40529-019-0255-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2019] [Accepted: 04/30/2019] [Indexed: 05/26/2023]
Abstract
BACKGROUND To counteract its dramatic species endangerment caused by extensive loss of habitat, Singapore is currently re-introducing into nature some of the native orchids to conserve and improve their germplasm. A main challenge of re-introduction is growing and establishing these plants under natural conditions, which are semi-arid with periodic drought. In this study, six native species were examined, of which three, Bulbophyllum vaginatum, Dendrobium leonis and Phalaenopsis cornu-cervi, are viewed as CAM species while the other three, Coelogyne rochussenii, Coelogyne mayeriana, and Bulbophyllum membranaceum are usually characterized as C3 species. We aimed to compare their physiological responses to drought under two different light conditions: (1) moderate light (photosynthetic photon flux density, PPFD of 900 μmol m-2 s-1) and (2) low light (PPFD < 100 μmol m-2 s-1). RESULTS After 7 weeks of drought under moderate light (DRML), photosynthetic light utilization was reduced in all six species, and relative water content (RWC) in leaves decreased to < 50% in CAM orchids, compared to > 50% in C3 species, while RWC in pseudobulbs (produced by 4 of the species) fell to < 50%. Both effects were reversed after 14 weeks of re-watering. Proline concentration in leaves increased in the CAM orchids and B. membranaceum (60-130 µmol g-1 FW), and CAM acidity increased (0.2 to 0.8 mmol H+/g fresh weight) in leaves and pseudobulbs of most species including C3 orchids after 7 weeks of DRML, but to lesser extent in B. membranaceum. CONCLUSION In the six native orchid species tested, osmoregulation by proline and CAM expression were adaptive responses to maintain photosynthesis under drought stress. Expression of CAM is a significant adaptive mechanism to drought in both C3 and CAM orchids. For C3 B. membranaceum, this CAM activity is best described as 'CAM-idling'. We propose that any future work in understanding adaptive responses in Singapore's native epiphytic orchids to periodic water deficit should also analyse the significance of CAM plasticity on water conservation within the plant and the regulation of CAM by prevailing water status and light intensity.
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Affiliation(s)
- Shawn Tay
- Natural Sciences and Science Education Academic Group, National Institute of Education, Nanyang Technological University, 1 Nanyang Walk, Singapore, 637 616, Singapore
| | - Jie He
- Natural Sciences and Science Education Academic Group, National Institute of Education, Nanyang Technological University, 1 Nanyang Walk, Singapore, 637 616, Singapore.
| | - Tim Wing Yam
- Singapore Botanic Gardens, National Parks Board, 1 Cluny Road, Singapore, 259 569, Singapore
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36
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Tran NT, Oguchi T, Akatsuka N, Matsunaga E, Kawaoka A, Yamada A, Ozeki Y, Watanabe KN, Kikuchi A. Development and evaluation of novel salt-tolerant Eucalyptus trees by molecular breeding using an RNA-Binding-Protein gene derived from common ice plant (Mesembryanthemum crystallinum L.). PLANT BIOTECHNOLOGY JOURNAL 2019; 17:801-811. [PMID: 30230168 PMCID: PMC6419579 DOI: 10.1111/pbi.13016] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Revised: 09/04/2018] [Accepted: 09/14/2018] [Indexed: 06/08/2023]
Abstract
The breeding of plantation forestry trees for the possible afforestation of marginal land would be one approach to addressing global warming issues. Here, we developed novel transgenic Eucalyptus trees (Eucalyptus camaldulensis Dehnh.) harbouring an RNA-Binding-Protein (McRBP) gene derived from a halophyte plant, common ice plant (Mesembryanthemum crystallinum L.). We conducted screened-house trials of the transgenic Eucalyptus using two different stringency salinity stress conditions to evaluate the plants' acute and chronic salt stress tolerances. Treatment with 400 mM NaCl, as the high-stringency salinity stress, resulted in soil electrical conductivity (EC) levels >20 mS/cm within 4 weeks. With the 400 mM NaCl treatment, >70% of the transgenic plants were intact, whereas >40% of the non-transgenic plants were withered. Treatment with 70 mM NaCl, as the moderate-stringency salinity stress, resulted in soil EC levels of approx. 9 mS/cm after 2 months, and these salinity levels were maintained for the next 4 months. All plants regardless of transgenic or non-transgenic status survived the 70 mM NaCl treatment, but after 6-month treatment the transgenic plants showed significantly higher growth and quantum yield of photosynthesis levels compared to the non-transgenic plants. In addition, the salt accumulation in the leaves of the transgenic plants was 30% lower than that of non-transgenic plants after 15-week moderate salt stress treatment. There results suggest that McRBP expression in the transgenic Eucalyptus enhances their salt tolerance both acutely and chronically.
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Affiliation(s)
- Ngoc‐Ha Thi Tran
- Graduate School of Life and Environmental SciencesUniversity of TsukubaTsukubaIbarakiJapan
| | - Taichi Oguchi
- Tsukuba Plant‐Innovation Research CenterUniversity of TsukubaTsukubaIbarakiJapan
- Faculty of Life and Environmental SciencesUniversity of TsukubaTsukubaIbarakiJapan
| | - Nobuhumi Akatsuka
- Department of BiotechnologyTokyo University of Agriculture and TechnologyTokyoJapan
| | - Etsuko Matsunaga
- Agri‐Biotechnology Research LaboratoryNippon Paper Industries Co., Ltd.TokyoJapan
| | - Akiyoshi Kawaoka
- Agri‐Biotechnology Research LaboratoryNippon Paper Industries Co., Ltd.TokyoJapan
| | - Akiyo Yamada
- Department of BiotechnologyTokyo University of Agriculture and TechnologyTokyoJapan
| | - Yoshihiro Ozeki
- Department of BiotechnologyTokyo University of Agriculture and TechnologyTokyoJapan
| | - Kazuo N. Watanabe
- Tsukuba Plant‐Innovation Research CenterUniversity of TsukubaTsukubaIbarakiJapan
- Faculty of Life and Environmental SciencesUniversity of TsukubaTsukubaIbarakiJapan
| | - Akira Kikuchi
- Tsukuba Plant‐Innovation Research CenterUniversity of TsukubaTsukubaIbarakiJapan
- Faculty of Life and Environmental SciencesUniversity of TsukubaTsukubaIbarakiJapan
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Lim SD, Lee S, Choi WG, Yim WC, Cushman JC. Laying the Foundation for Crassulacean Acid Metabolism (CAM) Biodesign: Expression of the C 4 Metabolism Cycle Genes of CAM in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2019; 10:101. [PMID: 30804970 PMCID: PMC6378705 DOI: 10.3389/fpls.2019.00101] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 01/22/2019] [Indexed: 05/21/2023]
Abstract
Crassulacean acid metabolism (CAM) is a specialized mode of photosynthesis that exploits a temporal CO2 pump with nocturnal CO2 uptake and concentration to reduce photorespiration, improve water-use efficiency (WUE), and optimize the adaptability of plants to hotter and drier climates. Introducing the CAM photosynthetic machinery into C3 (or C4) photosynthesis plants (CAM Biodesign) represents a potentially breakthrough strategy for improving WUE while maintaining high productivity. To optimize the success of CAM Biodesign approaches, the functional analysis of individual C4 metabolism cycle genes is necessary to identify the essential genes for robust CAM pathway introduction. Here, we isolated and analyzed the subcellular localizations of 13 enzymes and regulatory proteins of the C4 metabolism cycle of CAM from the common ice plant in stably transformed Arabidopsis thaliana. Six components of the carboxylation module were analyzed including beta-carbonic anhydrase (McBCA2), phosphoenolpyruvate carboxylase (McPEPC1), phosphoenolpyruvate carboxylase kinase (McPPCK1), NAD-dependent malate dehydrogenase (McNAD-MDH1, McNAD-MDH2), and NADP-dependent malate dehydrogenase (McNADP-MDH1). In addition, seven components of the decarboxylation module were analyzed including NAD-dependent malic enzyme (McNAD-ME1, McNAD-ME2), NADP-dependent malic enzyme (McNADP-ME1, NADP-ME2), pyruvate, orthophosphate dikinase (McPPDK), pyruvate, orthophosphate dikinase-regulatory protein (McPPDK-RP), and phosphoenolpyruvate carboxykinase (McPEPCK). Ectopic overexpression of most C4-metabolism cycle components resulted in increased rosette diameter, leaf area, and leaf fresh weight of A. thaliana except for McNADP-MDH1, McPPDK-RP, and McPEPCK. Overexpression of most carboxylation module components resulted in increased stomatal conductance and dawn/dusk titratable acidity (TA) as an indirect measure of organic acid (mainly malate) accumulation in A. thaliana. In contrast, overexpression of the decarboxylating malic enzymes reduced stomatal conductance and TA. This comprehensive study provides fundamental insights into the relative functional contributions of each of the individual components of the core C4-metabolism cycle of CAM and represents a critical first step in laying the foundation for CAM Biodesign.
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Affiliation(s)
| | | | | | | | - John C. Cushman
- Department of Biochemistry and Molecular Biology, University of Nevada, Reno, Reno, NV, United States
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Yuan F, Guo J, Shabala S, Wang B. Reproductive Physiology of Halophytes: Current Standing. FRONTIERS IN PLANT SCIENCE 2019; 9:1954. [PMID: 30687356 PMCID: PMC6334627 DOI: 10.3389/fpls.2018.01954] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 12/17/2018] [Indexed: 05/19/2023]
Abstract
Background: Halophytes possess efficient salt-tolerance mechanisms and can complete their life cycles in naturally saline soils with NaCl contents exceeding 200 mM. While a significant progress have been made in recent decades elucidating underlying salt-tolerance mechanisms, these studies have been mostly confined to the vegetative growth stage. At the same time, the capacity to generate high-quality seeds and to survive early developmental stages under saline conditions, are both critically important for plants. Halophytes perform well in both regards, whereas non-halophytes cannot normally complete their life cycles under saline conditions. Scope: Research into the effects of salinity on plant reproductive biology has gained momentum in recent years. However, it remains unclear whether the reproductive biology of halophytes differs from that of non-halophytes, and whether their reproductive processes benefit, like their vegetative growth, from the presence of salt in the rhizosphere. Here, we summarize current knowledge of the mechanisms underlying the superior reproductive biology of halophytes, focusing on critical aspects including control of flowering time, changes in plant hormonal status and their impact on anther and pollen development and viability, plant carbohydrate status and seed formation, mechanisms behind the early germination of halophyte seeds, and the role of seed polymorphism. Conclusion: Salt has beneficial effects on halophyte reproductive growth that include late flowering, increased flower numbers and pollen vitality, and high seed yield. This improved performance is due to optimal nutrition during vegetative growth, alterations in plant hormonal status, and regulation of flowering genes. In addition, the seeds of halophytes harvested under saline conditions show higher salt tolerance than those obtained under non-saline condition, largely due to increased osmolyte accumulation, more optimal hormonal composition (e.g., high gibberellic acid and low abcisic acid content) and, in some species, seed dimorphism. In the near future, identifying key genes involved in halophyte reproductive physiology and using them to transform crops could be a promising approach to developing saline agriculture.
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Affiliation(s)
- Fang Yuan
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Jinan, China
| | - Jianrong Guo
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Jinan, China
| | - Sergey Shabala
- Department of Horticulture, Foshan University, Foshan, China
- College of Sciences and Engineering, University of Tasmania, Hobart, TAS, Australia
| | - Baoshan Wang
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Jinan, China
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Hwang HH, Wang CH, Chen HH, Ho JF, Chi SF, Huang FC, Yen HE. Effective Agrobacterium-mediated transformation protocols for callus and roots of halophyte ice plant (Mesembryanthemum crystallinum). BOTANICAL STUDIES 2019; 60:1. [PMID: 30617933 PMCID: PMC6323063 DOI: 10.1186/s40529-018-0249-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2018] [Accepted: 12/19/2018] [Indexed: 05/21/2023]
Abstract
BACKGROUND Ice plant (Mesembryanthemum crystallinum L.) is a model plant for studying salt-tolerant mechanisms in higher plants. Many salt stress-responsive ice plant genes have been identified with molecular and biochemical approaches. However, no further functional characterization of these genes in host plant due to lack of easy and effective transformation protocols. RESULTS To establish efficient transformation system of ice plants, three types of ice plant materials, hypocotyl-derived callus, aseptically-grown seedlings and pot-grown juvenile plants, were used to develop Agrobacterium-mediated transformation protocols. The highest transient transformation efficiency was with 5-day-old ice plant callus co-incubated with an Agrobacterium tumefaciens at 2.5 × 109 cells mL-1 for 48 h. The 3-day-old ice plant seedlings with root tip removed were successfully infected with A. tumefaciens or A. rhizogenes, and obtained 85% and 33-100% transient transformation rates, respectively. The transient transformation assays in ice plant callus and seedlings demonstrated that the concentrations of Agrobacteria, the durations of co-incubation time, and the plant growth stages were three important factors affecting the transient transformation efficiencies. Additionally, pot-grown juvenile plants were syringe-injected with two A. rhizogenes strains A8196 and NCPPB 1855, to establish transformed roots. After infections, ice plants were grown hydroponically and showed GUS expressions in transformed roots for 8 consecutive weeks. CONCLUSIONS Our Agrobacterium-mediated transformation protocols utilized hypocotyl-derived callus and seedlings as plant materials, which can be easily obtained in large quantity. The average successful transient transformation rates were about 2.4-3.0% with callus and 33.3-100.0% with seedlings. We also developed a rapid and efficient protocol to generate transgenic roots by A. rhizogenes infections without laborious and challenging tissue culture techniques. This protocol to establish composite ice plant system demonstrates excellent improvements in efficiency, efficacy, and ease of use over previous ice plant transformation protocols. These Agrobacterium-mediated transformation protocols can be versatile and efficient tools for exploring gene functions at cellular and organ levels of ice plants.
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Affiliation(s)
- Hau-Hsuan Hwang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
- Ph.D. Program in Microbial Genomics, National Chung Hsing University, Taichung, Taiwan
- Advanced Plant Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
- Innovation and Development Center of Sustainable Agriculture, National Chung Hsing University, Taichung, Taiwan
| | - Chih-Hao Wang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
| | - Hsiao-Huei Chen
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
| | - Jia-Fang Ho
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
| | - Shin-Fei Chi
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
| | - Fan-Chen Huang
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
- Ph.D. Program in Microbial Genomics, National Chung Hsing University and Academia Sinica, Taichung, Taiwan
| | - Hungchen Emilie Yen
- Department of Life Sciences, National Chung Hsing University, No. 145, Xingda Road, Taichung, 402 Taiwan
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Tyerman SD, Munns R, Fricke W, Arsova B, Barkla BJ, Bose J, Bramley H, Byrt C, Chen Z, Colmer TD, Cuin T, Day DA, Foster KJ, Gilliham M, Henderson SW, Horie T, Jenkins CLD, Kaiser BN, Katsuhara M, Plett D, Miklavcic SJ, Roy SJ, Rubio F, Shabala S, Shelden M, Soole K, Taylor NL, Tester M, Watt M, Wege S, Wegner LH, Wen Z. Energy costs of salinity tolerance in crop plants. THE NEW PHYTOLOGIST 2019; 221:25-29. [PMID: 30488600 DOI: 10.1111/nph.15555] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Affiliation(s)
- Stephen D Tyerman
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Rana Munns
- ARC Centre of Excellence in Plant Energy Biology, and School of Agriculture and Environment, The University of Western Australia, Crawley, WA, 6009, Australia
- CSIRO Agriculture and Food, Canberra, ACT, 2601, Australia
| | - Wieland Fricke
- School of Biology and Environmental Sciences, University College Dublin (UCD), Dublin, 4, Ireland
| | - Borjana Arsova
- Plant Sciences, Institute of Bio and Geosciences, Forschungszentrum Jülich, Wilhelm-Johnen Strasse, 52425, Jülich, Germany
| | - Bronwyn J Barkla
- Southern Cross Plant Science, Southern Cross University, Lismore, NSW, 2480, Australia
| | - Jayakumar Bose
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Helen Bramley
- Plant Breeding Institute, Sydney Institute of Agriculture & School of Life and Environmental Sciences, The University of Sydney, Narrabri, NSW, 2390, Australia
| | - Caitlin Byrt
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Zhonghua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Timothy D Colmer
- School of Agriculture and Environment, ARC Industrial Transformation Research Hub on Legumes for Sustainable Agriculture, Faculty of Science, The University of Western Australia, Crawley, WA, 6009, Australia
| | - Tracey Cuin
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, 7001, Australia
| | - David A Day
- College of Science & Engineering, Flinders University, GPO Box 2100, Adelaide, SA, 5001, Australia
| | - Kylie J Foster
- Phenomics and Bioinformatics Research Centre, University of South Australia, Mawson Lakes, SA, 5095, Australia
| | - Matthew Gilliham
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Sam W Henderson
- School of Agriculture, Food and Wine, University of Adelaide, Urrbrae, SA, 5064, Australia
- CSIRO Agriculture and Food, Urrbrae, SA, 5064, Australia
| | - Tomoaki Horie
- Division of Applied Biology, Faculty of Textile Science and Technology, Shinshu University, 3-15-1, Tokida, Ueda, Nagano, 386-8567, Japan
| | - Colin L D Jenkins
- College of Sciences and Engineering, Flinders University of South Australia, Bedford Park, SA, 5042, Australia
| | - Brent N Kaiser
- School of Life and Environmental Science, University of Sydney, Camden, NSW, 2570, Australia
| | - Maki Katsuhara
- Institute of Plant Science and Resources, Okayama University, Kurashiki, 7100046, Japan
| | - Darren Plett
- School of Agriculture, Food and Wine, University of Adelaide, Urrbrae, SA, 5064, Australia
- School of Agriculture and Food, The University of Melbourne, Melbourne, VIC, 3010, Australia
| | - Stanley J Miklavcic
- Phenomics and Bioinformatics Research Centre, University of South Australia, Mawson Lakes, SA, 5095, Australia
| | - Stuart J Roy
- School of Agriculture, Food and Wine, University of Adelaide, Urrbrae, SA, 5064, Australia
| | - Francisco Rubio
- Departamento de Nutrición Vegetal, CEBAS-CSIC-Campus de Espinardo, 30100, Murcia, Spain
| | - Sergey Shabala
- College of Science and Engineering, University of Tasmania, Private Bag 54, Hobart, TAS, 7001, Australia
| | - Megan Shelden
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Kathleen Soole
- College of Sciences and Engineering, Flinders University of South Australia, Bedford Park, SA, 5042, Australia
| | - Nicolas L Taylor
- ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences and Institute of Agriculture, The University of Western Australia, Crawley, WA, 6009, Australia
| | - Mark Tester
- Biological and Environmental Sciences & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
| | - Michelle Watt
- Plant Sciences, Institute of Bio and Geosciences, Forschungszentrum Juelich, Helmholtz Association, 52425, Juelich, Germany
| | - Stefanie Wege
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Lars H Wegner
- Institute for Pulsed Power and Microwave Technology (IHM), Karlsruhe Institute of Technology, D-76344, Eggenstein-Leopoldshafen, Germany
| | - Zhengyu Wen
- School of Life and Environmental Science, University of Sydney, Camden, NSW, 2570, Australia
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Zeng F, Shabala S, Maksimović JD, Maksimović V, Bonales-Alatorre E, Shabala L, Yu M, Zhang G, Živanović BD. Revealing mechanisms of salinity tissue tolerance in succulent halophytes: A case study for Carpobrotus rossi. PLANT, CELL & ENVIRONMENT 2018; 41:2654-2667. [PMID: 29956332 DOI: 10.1111/pce.13391] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Revised: 06/14/2018] [Accepted: 06/15/2018] [Indexed: 06/08/2023]
Abstract
Efforts to breed salt tolerant crops could benefit from investigating previously unexplored traits. One of them is a tissue succulency. In this work, we have undertaken an electrophysiological and biochemical comparison of properties of mesophyll and storage parenchyma leaf tissues of a succulent halophyte species Carpobrotus rosii ("pigface"). We show that storage parenchyma cells of C. rossii act as Na+ sink and possessed both higher Na+ sequestration (298 vs. 215 mM NaCl in mesophyll) and better K+ retention ability. The latter traits was determined by the higher rate of H+ -ATPase operation and higher nonenzymatic antioxidant activity in this tissue. Na+ uptake in both tissues was insensitive to either Gd3+ or elevated Ca2+ ruling out involvement of nonselective cation channels as a major path for Na+ entry. Patch-clamp experiments have revealed that Caprobrotus plants were capable to downregulate activity of fast vacuolar channels when exposed to saline environment; this ability was higher in the storage parenchyma cells compared with mesophyll. Also, storage parenchyma cells have constitutively lower number of open slow vacuolar channels, whereas in mesophyll, this suppression was inducible by salt. Taken together, these results provide a mechanistic basis for efficient Na+ sequestration in the succulent leaf tissues.
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Affiliation(s)
- Fanrong Zeng
- Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
- College of Science and Engineering, University of Tasmania, Hobart, TAS, Australia
| | - Sergey Shabala
- Department of Horticulture, Foshan University, Foshan, China
- College of Science and Engineering, University of Tasmania, Hobart, TAS, Australia
| | | | - Vuk Maksimović
- Institute for Multidisciplinary Research, University of Belgrade, Belgrade, Serbia
| | - Edgar Bonales-Alatorre
- College of Science and Engineering, University of Tasmania, Hobart, TAS, Australia
- Centro Universitario de Investigaciones Biomédicas, University of Colima, Colima, México
| | - Lana Shabala
- College of Science and Engineering, University of Tasmania, Hobart, TAS, Australia
| | - Min Yu
- Department of Horticulture, Foshan University, Foshan, China
| | - Guoping Zhang
- Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - Branka D Živanović
- Institute for Multidisciplinary Research, University of Belgrade, Belgrade, Serbia
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Fan L, Wang G, Hu W, Pantha P, Tran KN, Zhang H, An L, Dassanayake M, Qiu QS. Transcriptomic view of survival during early seedling growth of the extremophyte Haloxylon ammodendron. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 132:475-489. [PMID: 30292980 DOI: 10.1016/j.plaphy.2018.09.024] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Revised: 09/08/2018] [Accepted: 09/18/2018] [Indexed: 05/27/2023]
Abstract
Seedling establishment in an extreme environment requires an integrated genomic and physiological response to survive multiple abiotic stresses. The extremophyte, Haloxylon ammodendron is a pioneer species capable of colonizing temperate desert sand dunes. We investigated the induced and basal transcriptomes in H. ammodendron under water-deficit stress during early seedling establishment. We find that not only drought-responsive genes, but multiple genes in pathways associated with salt, osmotic, cold, UV, and high-light stresses were induced, suggesting an altered regulatory stress response system. Additionally, H. ammodendron exhibited enhanced biotic stress tolerance by down-regulation of genes that were generally up-regulated during pathogen entry in susceptible plants. By comparing the H. ammodendron basal transcriptome to six closely related transcriptomes in Amaranthaceae, we detected enriched basal level transcripts in H. ammodendron that shows preadaptation to abiotic stress and pathogens. We found transcripts that were generally maintained at low levels and some induced only under abiotic stress in the stress-sensitive model, Arabidopsis thaliana to be highly expressed under basal conditions in the Amaranthaceae transcriptomes including H. ammodendron. H. ammodendron shows coordinated expression of genes that regulate stress tolerance and seedling development resource allocation to support survival against multiple stresses in a sand dune dominated temperate desert environment.
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Affiliation(s)
- Ligang Fan
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, 222 South Tianshui Road, Lanzhou, Gansu, 730000, China
| | - Guannan Wang
- Department of Biological Sciences, Louisiana State University, 202 Life Sciences Building, Baton Rouge, LA, 70803, USA
| | - Wei Hu
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, 222 South Tianshui Road, Lanzhou, Gansu, 730000, China
| | - Pramod Pantha
- Department of Biological Sciences, Louisiana State University, 202 Life Sciences Building, Baton Rouge, LA, 70803, USA
| | - Kieu-Nga Tran
- Department of Biological Sciences, Louisiana State University, 202 Life Sciences Building, Baton Rouge, LA, 70803, USA
| | - Hua Zhang
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, 222 South Tianshui Road, Lanzhou, Gansu, 730000, China
| | - Lizhe An
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, 222 South Tianshui Road, Lanzhou, Gansu, 730000, China
| | - Maheshi Dassanayake
- Department of Biological Sciences, Louisiana State University, 202 Life Sciences Building, Baton Rouge, LA, 70803, USA.
| | - Quan-Sheng Qiu
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, 222 South Tianshui Road, Lanzhou, Gansu, 730000, China.
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44
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Barkla BJ, Garibay-Hernández A, Melzer M, Rupasinghe TWT, Roessner U. Single cell-type analysis of cellular lipid remodelling in response to salinity in the epidermal bladder cells of the model halophyte Mesembryanthemum crystallinum. PLANT, CELL & ENVIRONMENT 2018; 41:2390-2403. [PMID: 29813189 DOI: 10.1111/pce.13352] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2018] [Revised: 05/22/2018] [Accepted: 05/22/2018] [Indexed: 05/26/2023]
Abstract
Salt stress causes dramatic changes in the organization and dynamic properties of membranes, however, little is known about the underlying mechanisms involved. Modified trichomes, known as epidermal bladder cells (EBC), on the leaves and stems of the halophyte Mesembryanthemum crystallinum can be successfully exploited as a single-cell-type system to investigate salt-induced changes to cellular lipid composition. In this study, alterations in key molecular species from different lipid classes highlighted an increase in phospholipid species, particularly those from phosphatidylcholine and phosphatidic acid (PA), where the latter is central to the synthesis of membrane lipids. Triacylglycerol (TG) species decreased during salinity, while there was little change in plastidic galactolipids. EBC transcriptomic and proteomic data mining revealed changes in genes and proteins involved in lipid metabolism and the upregulation of transcripts for PIPKIB, PI5PII, PIPKIII, and phospholipase D delta suggested the induction of signalling processes mediated by phosphoinositides and PA. TEM and flow cytometry showed the dynamic nature of lipid droplets in these cells under salt stress. Altogether, this work indicates that the metabolism of TG might play an important role in EBC response to salinity as either an energy reserve for sodium accumulation and/or driving membrane biosynthesis for EBC expansion.
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Affiliation(s)
- Bronwyn J Barkla
- Southern Cross Plant Science, Southern Cross University, Lismore, New South Wales, Australia
| | - Adriana Garibay-Hernández
- Instituto de Biotecnología, UNAM, Cuernavaca, Morelos, Mexico
- Leibniz Institute of Plant Genetics and Crop Plant Research, Seeland, Germany
| | - Michael Melzer
- Leibniz Institute of Plant Genetics and Crop Plant Research, Seeland, Germany
| | - Thusitha W T Rupasinghe
- School of BioSciences, University of Melbourne, Parkville, Victoria, Australia
- Metabolomics Australia, School of BioSciences, University of Melbourne, Parkville, Victoria, Australia
| | - Ute Roessner
- School of BioSciences, University of Melbourne, Parkville, Victoria, Australia
- Metabolomics Australia, School of BioSciences, University of Melbourne, Parkville, Victoria, Australia
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Li L, Li M, Qi X, Tang X, Zhou Y. De novo transcriptome sequencing and analysis of genes related to salt stress response in Glehnia littoralis. PeerJ 2018; 6:e5681. [PMID: 30294511 PMCID: PMC6170154 DOI: 10.7717/peerj.5681] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Accepted: 08/30/2018] [Indexed: 12/02/2022] Open
Abstract
Soil salinity is one of the major environmental stresses affecting plant growth, development, and reproduction. Salt stress also affects the accumulation of some secondary metabolites in plants. Glehnia littoralis is an endangered medicinal halophyte that grows in coastal habitats. Peeled and dried Glehnia littoralis roots, named Radix Glehniae, have been used traditionally as a Chinese herbal medicine. Although Glehnia littoralis has great ecological and commercial value, salt-related mechanisms in Glehnia littoralis remain largely unknown. In this study, we analysed the transcriptome of Glehnia littoralis in response to salt stress by RNA-sequencing to identify potential salt tolerance gene networks. After de novo assembly, we obtained 105,875 unigenes, of which 75,559 were annotated in public databases. We identified 10,335 differentially expressed genes (DEGs; false discovery rate <0.05 and |log2 fold-change| ≥ 1) between NaCl treatment (GL2) and control (GL1), with 5,018 upregulated and 5,317 downregulated DEGs. To further this investigation, we performed Gene Ontology (GO) analysis and the Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathway analysis. DEGs involved in secondary metabolite biosynthetic pathways, plant signal transduction pathways, and transcription factors in response to salt stress were analysed. In addition, we tested the gene expression of 15 unigenes by quantitative real-time PCR (qRT-PCR) to confirm the RNA-sequencing results. Our findings represent a large-scale assessment of the Glehnia littoralis gene resource, and provide useful information for exploring its molecular mechanisms of salt tolerance. Moreover, genes enriched in metabolic pathways could be used to investigate potential biosynthetic pathways of active compounds by Glehnia littoralis.
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Affiliation(s)
- Li Li
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China
| | - Mimi Li
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China
| | - Xiwu Qi
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China
| | - Xingli Tang
- Nanjing Agricultural University, Nanjing, China
| | - Yifeng Zhou
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China.,Nanjing Agricultural University, Nanjing, China.,Dongtai Institute of Tidal Flat, Nanjing Branch of Chinese Academy of Sciences, Dongtai, China.,The Jiangsu Provincial Platform for Conservation and Utilization of Agricultural Germplasm, Nanjing, China
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46
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Böhm J, Messerer M, Müller HM, Scholz-Starke J, Gradogna A, Scherzer S, Maierhofer T, Bazihizina N, Zhang H, Stigloher C, Ache P, Al-Rasheid KAS, Mayer KFX, Shabala S, Carpaneto A, Haberer G, Zhu JK, Hedrich R. Understanding the Molecular Basis of Salt Sequestration in Epidermal Bladder Cells of Chenopodium quinoa. Curr Biol 2018; 28:3075-3085.e7. [PMID: 30245105 DOI: 10.1016/j.cub.2018.08.004] [Citation(s) in RCA: 69] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Revised: 06/20/2018] [Accepted: 08/01/2018] [Indexed: 02/03/2023]
Abstract
Soil salinity is destroying arable land and is considered to be one of the major threats to global food security in the 21st century. Therefore, the ability of naturally salt-tolerant halophyte plants to sequester large quantities of salt in external structures, such as epidermal bladder cells (EBCs), is of great interest. Using Chenopodium quinoa, a pseudo-cereal halophyte of great economic potential, we have shown previously that, upon removal of salt bladders, quinoa becomes salt sensitive. In this work, we analyzed the molecular mechanism underlying the unique salt dumping capabilities of bladder cells in quinoa. The transporters differentially expressed in the EBC transcriptome and functional electrophysiological testing of key EBC transporters in Xenopus oocytes revealed that loading of Na+ and Cl- into EBCs is mediated by a set of tailored plasma and vacuole membrane-based sodium-selective channel and chloride-permeable transporter.
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Affiliation(s)
- Jennifer Böhm
- Tasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 54, Hobart, TAS 7001, Australia
| | - Maxim Messerer
- Plant Genome and Systems Biology, Helmholtz Center Munich, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany
| | - Heike M Müller
- Institute for Molecular Plant Physiology and Biophysics, University of Wuerzburg, Julius-von-Sachs Platz 2, 97082 Wuerzburg, Germany
| | - Joachim Scholz-Starke
- Institute of Biophysics, National Research Council (CNR), Via De Marini 6, 16149 Genova, Italy
| | - Antonella Gradogna
- Institute of Biophysics, National Research Council (CNR), Via De Marini 6, 16149 Genova, Italy
| | - Sönke Scherzer
- Institute for Molecular Plant Physiology and Biophysics, University of Wuerzburg, Julius-von-Sachs Platz 2, 97082 Wuerzburg, Germany
| | - Tobias Maierhofer
- Institute for Molecular Plant Physiology and Biophysics, University of Wuerzburg, Julius-von-Sachs Platz 2, 97082 Wuerzburg, Germany
| | - Nadia Bazihizina
- Tasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 54, Hobart, TAS 7001, Australia; Department of Agrifood Production and Environmental Sciences, Università degli Studi di Firenze, Viale delle Idee 30, 50019 Sesto Fiorentino, Florence, Italy
| | - Heng Zhang
- Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, 3888 Chenhua Road, Shanghai 201602, China
| | - Christian Stigloher
- Imaging Core Facility, Biocenter, University of Wuerzburg, Am Hubland, 97074 Wuerzburg, Germany
| | - Peter Ache
- Institute for Molecular Plant Physiology and Biophysics, University of Wuerzburg, Julius-von-Sachs Platz 2, 97082 Wuerzburg, Germany
| | - Khaled A S Al-Rasheid
- Zoology Department, College of Science, King Saud University, PO Box 2455, Riyadh 11451, Saudi Arabia
| | - Klaus F X Mayer
- Plant Genome and Systems Biology, Helmholtz Center Munich, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany
| | - Sergey Shabala
- Tasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 54, Hobart, TAS 7001, Australia; Department of Horticulture, Foshan University, Foshan 528000, PRC
| | - Armando Carpaneto
- Institute of Biophysics, National Research Council (CNR), Via De Marini 6, 16149 Genova, Italy; Department of Earth, Environment and Life Sciences (DISTAV), University of Genoa, Viale Benedetto XV 5, 16132 Genova, Italy
| | - Georg Haberer
- Plant Genome and Systems Biology, Helmholtz Center Munich, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
| | - Jian-Kang Zhu
- Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, 3888 Chenhua Road, Shanghai 201602, China; Department of Horticulture and Landscape Architecture, Purdue University, 625 Agriculture Mall Drive, West Lafayette, IN 47907, USA.
| | - Rainer Hedrich
- Institute for Molecular Plant Physiology and Biophysics, University of Wuerzburg, Julius-von-Sachs Platz 2, 97082 Wuerzburg, Germany.
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Wang J, Li B, Yao L, Meng Y, Ma X, Lai Y, Si E, Ren P, Yang K, Shang X, Wang H. Comparative transcriptome analysis of genes involved in Na + transport in the leaves of halophyte Halogeton glomeratus. Gene 2018; 678:407-416. [PMID: 30096457 DOI: 10.1016/j.gene.2018.08.025] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2018] [Revised: 07/30/2018] [Accepted: 08/06/2018] [Indexed: 10/28/2022]
Abstract
Compartmentalization of Na+ into vacuoles is considered to be the most critical aspect of salt tolerance in H. glomeratus, an annual, succulent halophyte. Previous analysis of transcriptome involved in the H. glomeratus salt stress response relied on next-generation sequencing technologies that limit the capture of accurately spliced, full-length isoforms. To gain deeper insights into its salt stress response, we used the H. glomeratus Iso-Seq transcriptome database as a reference, and subsequent next-generation sequencing was subjected to various NaCl concentrations of leaves from plants revealed 115 upregulated and 87 downregulated differentially expressed isoforms (core DEIs). The majority of the core DEIs were involved in carbohydrate metabolism and energy production and conversion. In contrast, levels of known isoforms encoding Na+ transporters did not change significantly under salt stress. However, 16 core DEIs of unknown function were predicted to possess transmembrane domains, suggesting that these candidate isoforms could be involved in Na+ transport in H. glomeratus. These results suggest a potential means for identification of novel Na+ transporters, in addition to providing a foundation for further investigation of Na+ transport networks in halophytes.
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Affiliation(s)
- Juncheng Wang
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Baochun Li
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Life Sciences and Technology, Gansu Agricultural University, Lanzhou, China
| | - Lirong Yao
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Yaxiong Meng
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Xiaole Ma
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Yong Lai
- College of Agriculture and Animal Husbandry, Qinghai University, Xining, China
| | - Erjing Si
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Panrong Ren
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Ke Yang
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Xunwu Shang
- College of Agronomy, Gansu Agricultural University, Lanzhou, China
| | - Huajun Wang
- Gansu Provincial Key Lab of Aridland Crop Science, Gansu Key Lab of Crop Improvement and Germplasm Enhancement, Lanzhou, China; College of Agronomy, Gansu Agricultural University, Lanzhou, China.
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48
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Zhang J, Wang P, Tian H, Jiang H, Wang Y, Yan C. Identification of interior salt-tolerant bacteria from ice plant Mesembryanthemum crystallinum and evaluation of their promoting effects. Symbiosis 2018. [DOI: 10.1007/s13199-018-0551-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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Krämer U. Conceptualizing plant systems evolution. CURRENT OPINION IN PLANT BIOLOGY 2018; 42:66-75. [PMID: 29579731 DOI: 10.1016/j.pbi.2018.02.008] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2017] [Revised: 02/22/2018] [Accepted: 02/26/2018] [Indexed: 06/08/2023]
Abstract
Organisms inhabiting extreme environments are emerging models in systems evolution, enabling us to identify the molecular alterations effecting major phenotypic divergence through comparative approaches. Here I discuss possible physiological mechanisms underlying evolutionary adaptations to extreme environments both theoretically and in relation to experimental observations. Reasoning leads me to the 'conserved steady-state' hypothesis of evolutionary adaptation: Between closely related plants adapted to differently composed soils, the homeostatically controlled steady-state set point cytosolic (buffered) concentrations of mineral ions are conserved. Subsequently, I compare molecular alterations expected to contribute to physiological adaptations with our present knowledge. Key roles of enhanced gene product dosage in plant evolutionary adaptations question the widespread stimulus response-centric paradigm. As a broader implication, co-regulation networks can lack decisive functional network elements. With this article, I hope to stimulate a discussion across research fields and provide an initial conceptual framework for future experimental testing and for quantitative modelling.
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Affiliation(s)
- Ute Krämer
- Molecular Genetics and Physiology of Plants, Ruhr University Bochum, Universitätsstraße 150, ND3/30, D-44801 Bochum, Germany.
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50
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Kiani-Pouya A, Roessner U, Jayasinghe NS, Lutz A, Rupasinghe T, Bazihizina N, Bohm J, Alharbi S, Hedrich R, Shabala S. Epidermal bladder cells confer salinity stress tolerance in the halophyte quinoa and Atriplex species. PLANT, CELL & ENVIRONMENT 2017; 40:1900-1915. [PMID: 28558173 DOI: 10.1111/pce.12995] [Citation(s) in RCA: 60] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2017] [Accepted: 05/21/2017] [Indexed: 05/02/2023]
Abstract
Epidermal bladder cells (EBCs) have been postulated to assist halophytes in coping with saline environments. However, little direct supporting evidence is available. Here, Chenopodium quinoa plants were grown under saline conditions for 5 weeks. One day prior to salinity treatment, EBCs from all leaves and petioles were gently removed by using a soft cosmetic brush and physiological, ionic and metabolic changes in brushed and non-brushed leaves were compared. Gentle removal of EBC neither initiated wound metabolism nor affected the physiology and biochemistry of control-grown plants but did have a pronounced effect on salt-grown plants, resulting in a salt-sensitive phenotype. Of 91 detected metabolites, more than half were significantly affected by salinity. Removal of EBC dramatically modified these metabolic changes, with the biggest differences reported for gamma-aminobutyric acid (GABA), proline, sucrose and inositol, affecting ion transport across cellular membranes (as shown in electrophysiological experiments). This work provides the first direct evidence for a role of EBC in salt tolerance in halophytes and attributes this to (1) a key role of EBC as a salt dump for external sequestration of sodium; (2) improved K+ retention in leaf mesophyll and (3) EBC as a storage space for several metabolites known to modulate plant ionic relations.
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Affiliation(s)
- Ali Kiani-Pouya
- School of Land and Food, University of Tasmania, 7001, Hobart, Tasmania, Australia
| | - Ute Roessner
- School of BioSciences, The University of Melbourne, 3010, Parkville, Victoria, Australia
- Metabolomics Australia, School of BioSciences, The University of Melbourne, 3010, Parkville, Victoria, Australia
| | - Nirupama S Jayasinghe
- Metabolomics Australia, School of BioSciences, The University of Melbourne, 3010, Parkville, Victoria, Australia
| | - Adrian Lutz
- Metabolomics Australia, School of BioSciences, The University of Melbourne, 3010, Parkville, Victoria, Australia
| | - Thusitha Rupasinghe
- Metabolomics Australia, School of BioSciences, The University of Melbourne, 3010, Parkville, Victoria, Australia
| | - Nadia Bazihizina
- School of Land and Food, University of Tasmania, 7001, Hobart, Tasmania, Australia
- Deptartment of Agrifood Production and Environmental Science, University of Florence, I-50019, Florence, Italy
| | - Jennifer Bohm
- School of Land and Food, University of Tasmania, 7001, Hobart, Tasmania, Australia
- Institute for Molecular Plant Physiology and Biophysics, Biocenter, Würzburg University, 97082, Wurzburg, Germany
| | - Sulaiman Alharbi
- Zoology Department, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Rainer Hedrich
- Institute for Molecular Plant Physiology and Biophysics, Biocenter, Würzburg University, 97082, Wurzburg, Germany
| | - Sergey Shabala
- School of Land and Food, University of Tasmania, 7001, Hobart, Tasmania, Australia
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