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Cruz-Bastida JP, Marshall EL, Reiser N, George J, Pearson EA, Feinstein KA, Al-Hallaq HA, Burton CS, Beaulieu D, MacDougall RD, Reiser I. Development of a neonate X-ray phantom for 2D imaging applications using single-tone inkjet printing. Med Phys 2021; 48:4944-4954. [PMID: 34255871 DOI: 10.1002/mp.15086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2020] [Revised: 04/16/2021] [Accepted: 06/17/2021] [Indexed: 11/11/2022] Open
Abstract
PURPOSE Inkjet printers can be used to fabricate anthropomorphic phantoms by the use of iodine-doped ink. However, challenges persist in implementing this technique. The calibration from grayscale to ink density is complex and time-consuming. The purpose of this work is to develop a printing methodology that requires a simpler calibration and is less dependent on printer characteristics to produce the desired range of x-ray attenuation values. METHODS Conventional grayscale printing was substituted by single-tone printing; that is, the superposition of pure black layers of iodinated ink. Printing was performed with a consumer-grade inkjet printer using ink made of potassium-iodide (KI) dissolved in water at 1 g/ml. A calibration for the attenuation of ink was measured using a commercial x-ray system at 70 kVp. A neonate radiograph obtained at 70 kVp served as an anatomical model. The attenuation map of the neonate radiograph was processed into a series of single-tone images. Single-tone images were printed, stacked, and imaged at 70 kVp. The phantom was evaluated by comparing attenuation values between the printed phantom and the original radiograph; attenuation maps were compared using the structural similarity index measure (SSIM), while attenuation histograms were compared using the Kullback-Leibler (KL) divergence. A region of interest (ROI)-based analysis was also performed, where the attenuation distribution within given ROIs was compared between phantom and patient. The phantom sharpness was evaluated in terms of modulation transfer function (MTF) estimates and signal spread profiles of high spatial resolution features in the image. RESULTS The printed phantom required 36 pages. The printing queue was automated and it took about 2 h to print the phantom. The radiograph of the printed phantom demonstrated a close resemblance to the original neonate radiograph. The SSIM of the phantom with respect to that of the patient was 0.53. Both patient and phantom attenuation histograms followed similar distributions, and the KL divergence between such histograms was 0.20. The ROI-based analysis showed that the largest deviations from patient attenuation values were observed at the higher and lower ends of the attenuation range. The limiting resolution of the proposed methodology was about 1 mm. CONCLUSION A methodology to generate a neonate phantom for 2D imaging applications, using single-tone printing, was developed. This method only requires a single-value calibration and required less than 2 h to print a complete phantom.
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Affiliation(s)
| | - Emily L Marshall
- Department of Radiology, University of Chicago, Chicago, IL, 60637, USA
| | - Nikolaj Reiser
- Department of Radiology, University of Chicago, Chicago, IL, 60637, USA
| | - Jonathan George
- Department of Radiation and Cellular Oncology, University of Chicago, Chicago, IL, 60637, USA
| | - Erik A Pearson
- Department of Radiation and Cellular Oncology, University of Chicago, Chicago, IL, 60637, USA
| | - Kate A Feinstein
- Department of Radiology, University of Chicago, Chicago, IL, 60637, USA
| | - Hania A Al-Hallaq
- Department of Radiation and Cellular Oncology, University of Chicago, Chicago, IL, 60637, USA
| | - Christiane S Burton
- Department of Radiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, 02115, USA
| | - Danielle Beaulieu
- Department of Radiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, 02115, USA
| | - Robert D MacDougall
- Department of Radiology, Boston Children's Hospital, Harvard Medical School, Boston, MA, 02115, USA
| | - Ingrid Reiser
- Department of Radiology, University of Chicago, Chicago, IL, 60637, USA
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Mahmood U, Apte A, Kanan C, Bates DDB, Corrias G, Manneli L, Oh JH, Erdi YE, Nguyen J, O'Deasy J, Shukla-Dave A. Quality control of radiomic features using 3D-printed CT phantoms. J Med Imaging (Bellingham) 2021; 8:033505. [PMID: 34222557 PMCID: PMC8240751 DOI: 10.1117/1.jmi.8.3.033505] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Accepted: 06/04/2021] [Indexed: 01/01/2023] Open
Abstract
Purpose: The lack of standardization in quantitative radiomic measures of tumors seen on computed tomography (CT) scans is generally recognized as an unresolved issue. To develop reliable clinical applications, radiomics must be robust across different CT scan modes, protocols, software, and systems. We demonstrate how custom-designed phantoms, imprinted with human-derived patterns, can provide a straightforward approach to validating longitudinally stable radiomic signature values in a clinical setting. Approach: Described herein is a prototype process to design an anatomically informed 3D-printed radiomic phantom. We used a multimaterial, ultra-high-resolution 3D printer with voxel printing capabilities. Multiple tissue regions of interest (ROIs), from four pancreas tumors, one lung tumor, and a liver background, were extracted from digital imaging and communication in medicine (DICOM) CT exam files and were merged together to develop a multipurpose, circular radiomic phantom (18 cm diameter and 4 cm width). The phantom was scanned 30 times using standard clinical CT protocols to test repeatability. Features that have been found to be prognostic for various diseases were then investigated for their repeatability and reproducibility across different CT scan modes. Results: The structural similarity index between the segment used from the patients' DICOM image and the phantom CT scan was 0.71. The coefficient variation for all assessed radiomic features was < 1.0 % across 30 repeat scans of the phantom. The percent deviation (pDV) from the baseline value, which was the mean feature value determined from repeat scans, increased with the application of the lung convolution kernel, changes to the voxel size, and increases in the image noise. Gray level co-occurrence features, contrast, dissimilarity, and entropy were particularly affected by different scan modes, presenting with pDV > ± 15 % . Conclusions: Previously discovered prognostic and popular radiomic features are variable in practice and need to be interpreted with caution or excluded from clinical implementation. Voxel-based 3D printing can reproduce tissue morphology seen on CT exams. We believe that this is a flexible, yet practical, way to design custom phantoms to validate and compare radiomic metrics longitudinally, over time, and across systems.
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Affiliation(s)
- Usman Mahmood
- Memorial Sloan Kettering Cancer Center, Department of Medical Physics, New York, United States
| | - Aditya Apte
- Memorial Sloan Kettering Cancer Center, Department of Medical Physics, New York, United States
| | - Christopher Kanan
- Rochester Institute of Technology, Department of Imaging Science, Rochester, New York, United States
| | - David D B Bates
- Memorial Sloan Kettering Cancer Center, Department of Radiology, New York, United States
| | - Giuseppe Corrias
- Memorial Sloan Kettering Cancer Center, Department of Radiology, New York, United States
| | | | - Jung Hun Oh
- Memorial Sloan Kettering Cancer Center, Department of Medical Physics, New York, United States
| | - Yusuf Emre Erdi
- Memorial Sloan Kettering Cancer Center, Department of Medical Physics, New York, United States
| | | | - Joseph O'Deasy
- Memorial Sloan Kettering Cancer Center, Department of Medical Physics, New York, United States
| | - Amita Shukla-Dave
- Memorial Sloan Kettering Cancer Center, Department of Medical Physics, New York, United States.,Memorial Sloan Kettering Cancer Center, Department of Radiology, New York, United States
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Perica ER, Sun Z. A Systematic Review of Three-Dimensional Printing in Liver Disease. J Digit Imaging 2019; 31:692-701. [PMID: 29633052 DOI: 10.1007/s10278-018-0067-x] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
The purpose of this review is to analyse current literature related to the clinical applications of 3D printed models in liver disease. A search of the literature was conducted to source studies from databases with the aim of determining the applications and feasibility of 3D printed models in liver disease. 3D printed model accuracy and costs associated with 3D printing, the ability to replicate anatomical structures and delineate important characteristics of hepatic tumours, and the potential for 3D printed liver models to guide surgical planning are analysed. Nineteen studies met the selection criteria for inclusion in the analysis. Seventeen of them were case reports and two were original studies. Quantitative assessment measuring the accuracy of 3D printed liver models was analysed in five studies with mean difference between 3D printed models and original source images ranging from 0.2 to 20%. Fifteen studies provided qualitative assessment with results showing the usefulness of 3D printed models when used as clinical tools in preoperative planning, simulation of surgical or interventional procedures, medical education, and training. The cost and time associated with 3D printed liver model production was reported in 11 studies, with costs ranging from US$13 to US$2000, duration of production up to 100 h. This systematic review shows that 3D printed liver models demonstrate hepatic anatomy and tumours with high accuracy. The models can assist with preoperative planning and may be used in the simulation of surgical procedures for the treatment of malignant hepatic tumours.
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Affiliation(s)
- Elizabeth Rose Perica
- Department of Medical Radiation Sciences, Curtin University, GPO Box U1987, Perth, Western Australia, 6845, Australia
| | - Zhonghua Sun
- Department of Medical Radiation Sciences, Curtin University, GPO Box U1987, Perth, Western Australia, 6845, Australia.
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Abdullah KA, McEntee MF, Reed W, Kench PL. Development of an organ-specific insert phantom generated using a 3D printer for investigations of cardiac computed tomography protocols. J Med Radiat Sci 2018; 65:175-183. [PMID: 29707915 PMCID: PMC6119733 DOI: 10.1002/jmrs.279] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2017] [Accepted: 03/28/2018] [Indexed: 12/13/2022] Open
Abstract
INTRODUCTION An ideal organ-specific insert phantom should be able to simulate the anatomical features with appropriate appearances in the resultant computed tomography (CT) images. This study investigated a 3D printing technology to develop a novel and cost-effective cardiac insert phantom derived from volumetric CT image datasets of anthropomorphic chest phantom. METHODS Cardiac insert volumes were segmented from CT image datasets, derived from an anthropomorphic chest phantom of Lungman N-01 (Kyoto Kagaku, Japan). These segmented datasets were converted to a virtual 3D-isosurface of heart-shaped shell, while two other removable inserts were included using computer-aided design (CAD) software program. This newly designed cardiac insert phantom was later printed by using a fused deposition modelling (FDM) process via a Creatbot DM Plus 3D printer. Then, several selected filling materials, such as contrast media, oil, water and jelly, were loaded into designated spaces in the 3D-printed phantom. The 3D-printed cardiac insert phantom was positioned within the anthropomorphic chest phantom and 30 repeated CT acquisitions performed using a multi-detector scanner at 120-kVp tube potential. Attenuation (Hounsfield Unit, HU) values were measured and compared to the image datasets of real-patient and Catphan® 500 phantom. RESULTS The output of the 3D-printed cardiac insert phantom was a solid acrylic plastic material, which was strong, light in weight and cost-effective. HU values of the filling materials were comparable to the image datasets of real-patient and Catphan® 500 phantom. CONCLUSIONS A novel and cost-effective cardiac insert phantom for anthropomorphic chest phantom was developed using volumetric CT image datasets with a 3D printer. Hence, this suggested the printing methodology could be applied to generate other phantoms for CT imaging studies.
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Affiliation(s)
- Kamarul A. Abdullah
- Discipline of Medical Radiation SciencesFaculty of Health SciencesThe University of SydneyLidcombeNew South WalesAustralia
- Faculty of Health SciencesUniversiti Sultan Zainal AbidinTerengganuMalaysia
| | - Mark F. McEntee
- Discipline of Medical Radiation SciencesFaculty of Health SciencesThe University of SydneyLidcombeNew South WalesAustralia
| | - Warren Reed
- Discipline of Medical Radiation SciencesFaculty of Health SciencesThe University of SydneyLidcombeNew South WalesAustralia
| | - Peter L. Kench
- Discipline of Medical Radiation SciencesFaculty of Health SciencesThe University of SydneyLidcombeNew South WalesAustralia
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Leng S, Chen B, Vrieze T, Kuhlmann J, Yu L, Alexander A, Matsumoto J, Morris J, McCollough CH. Construction of realistic phantoms from patient images and a commercial three-dimensional printer. J Med Imaging (Bellingham) 2016; 3:033501. [PMID: 27429998 DOI: 10.1117/1.jmi.3.3.033501] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2016] [Accepted: 06/16/2016] [Indexed: 12/14/2022] Open
Abstract
The purpose of this study was to use three-dimensional (3-D) printing techniques to construct liver and brain phantoms having realistic pathologies, anatomic structures, and heterogeneous backgrounds. Patient liver and head computed tomography (CT) images were segmented into tissue, vessels, liver lesion, white and gray matter, and cerebrospinal fluid (CSF). Stereolithography files of each object were created and imported into a commercial 3-D printer. Printing materials were assigned to each object after test scans, which showed that the printing materials had CT numbers ranging from 70 to 121 HU at 120 kV. Printed phantoms were scanned on a CT scanner and images were evaluated. CT images of the liver phantom had measured CT numbers of 77.8 and 96.6 HU for the lesion and background, and 137.5 to 428.4 HU for the vessels channels, which were filled with iodine solutions. The difference in CT numbers between lesions and background (18.8 HU) was representative of the low-contrast values needed for optimization tasks. The liver phantom background was evaluated with Haralick features and showed similar texture between patient and phantom images. CT images of the brain phantom had CT numbers of 125, 134, and 108 HU for white matter, gray matter, and CSF, respectively. The CT number differences were similar to those in patient images.
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Affiliation(s)
- Shuai Leng
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Baiyu Chen
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Thomas Vrieze
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Joel Kuhlmann
- Mayo Clinic , Division of Engineering, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Lifeng Yu
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Amy Alexander
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Jane Matsumoto
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Jonathan Morris
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
| | - Cynthia H McCollough
- Mayo Clinic , Department of Radiology, 200 First Street SW, Rochester, Minnesota 55905, United States
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