The clinical value of dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) semi-quantitative parameters in monitoring neoadjuvant chemotherapy response of osteosarcoma

BACKGROUND

Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) is a non-invasive technique which could monitor tumor morphology, blood vessel dynamics, and micro-environmental changes.

PURPOSE

To evaluate the value of DCE-MRI semi-quantitative parameters in monitoring the neoadjuvant chemotherapy (NAC) response of osteosarcoma.

MATERIAL AND METHODS

Twenty-five patients pathologically confirmed as osteosarcoma received four cycles of NAC followed by surgery. All patients underwent conventional and dynamic MRI twice, before starting chemotherapy and before surgical treatment. With a reference standard of histological response (tumor necrosis rate), semi-quantitative parameters were compared between good response group (TNR ≥ 90%) and non-response group (TNR < 90%). The differences between intra- and inter-group parameters before and after NAC were analyzed by Mann-Whitney U test. Receiver operating characteristic (ROC) analysis was generated to assess the parameters' efficacy in predicting the outcome of NAC.

RESULTS

The changes were statistically significant on slope, maximum signal intensity (SI_max), time to peak (TTP), signal enhanced extent (SEE), peak percent enhancement (PPE), washout rate (WOR), and enhancement rate (ER) in the good response group (P < 0.05), while only SI_max and SEE were different in the non-response group after NAC. The changes in Slope, SI_max, TTP, SEE, WOR, and ER were markedly different (P < 0.05) between the two groups after NAC. Also, at the threshold values of 3.2%/s, 175 s, and 5.4% (slope, TTP, and ER), the sensitivity and specificity for predicting good response to chemotherapy were 83.3% and 92.3%, 91.7% and 69.2%, 84.6% and 75.0%, respectively.

CONCLUSION

Slope, TTP, and ER values could be used to evaluate and predict the response to NAC in osteosarcoma.

Automated Segmental Analysis of Fully Quantitative Myocardial Blood Flow Maps by First-Pass Perfusion Cardiovascular Magnetic Resonance

First pass gadolinium-enhanced cardiovascular magnetic resonance (CMR) perfusion imaging allows fully quantitative pixel-wise myocardial blood flow (MBF) assessment, with proven diagnostic value for coronary artery disease. Segmental analysis requires manual segmentation of the myocardium. This work presents a fully automatic method of segmenting the left ventricular myocardium from MBF pixel maps, validated on a retrospective dataset of 247 clinical CMR perfusion studies, each including rest and stress images of three slice locations, performed on a 1.5T scanner. Pixel-wise MBF maps were segmented using an automated pipeline including region growing, edge detection, principal component analysis, and active contours to segment the myocardium, detect key landmarks, and divide the myocardium into sectors appropriate for analysis. Automated segmentation results were compared against a manually defined reference standard using three quantitative metrics: Dice coefficient, Cohen Kappa and myocardial border distance. Sector-wise average MBF and myocardial perfusion reserve (MPR) were compared using Pearson's correlation coefficient and Bland-Altman Plots. The proposed method segmented stress and rest MBF maps of 243 studies automatically. Automated and manual myocardial segmentation had an average (± standard deviation) Dice coefficient of 0.86 ± 0.06, Cohen Kappa of 0.86 ± 0.06, and Euclidian distances of 1.47 ± 0.73 mm and 1.02 ± 0.51 mm for the epicardial and endocardial border, respectively. Automated and manual sector-wise MBF and MPR values correlated with Pearson's coefficient of 0.97 and 0.92, respectively, while Bland-Altman analysis showed bias of 0.01 and 0.07 ml/g/min. The validated method has been integrated with our fully automated MBF pixel mapping pipeline to aid quantitative assessment of myocardial perfusion CMR.

Automatic myocardial segmentation in dynamic contrast enhanced perfusion MRI using Monte Carlo dropout in an encoder-decoder convolutional neural network

BACKGROUND AND OBJECTIVE

Cardiac perfusion magnetic resonance imaging (MRI) with first pass dynamic contrast enhancement (DCE) is a useful tool to identify perfusion defects in myocardial tissues. Automatic segmentation of the myocardium can lead to efficient quantification of perfusion defects. The purpose of this study was to investigate the usefulness of uncertainty estimation in deep convolutional neural networks for automatic myocardial segmentation.

METHODS

A U-Net segmentation model was trained on the cardiac cine data. Monte Carlo dropout sampling of the U-Net model was performed on the dynamic perfusion datasets frame-by-frame to estimate the standard deviation (SD) maps. The uncertainty estimate based on the sum of the SD values was used to select the optimal frames for endocardial and epicardial segmentations. DCE perfusion data from 35 subjects (14 subjects with coronary artery disease, 8 subjects with hypertrophic cardiomyopathy, and 13 healthy volunteers) were evaluated. The Dice similarity scores of the proposed method were compared with those of a semi-automatic U-Net segmentation method, which involved user selection of an image frame for segmentation in the cardiac perfusion dataset.

RESULTS

The proposed method was fully automatic and did not require manual labeling of the cardiac perfusion image data for model development. The mean Dice similarity score of the proposed automatic method was 0.806 (±0.096), which was comparable to the 0.808 (±0.084) Dice score of the semi-automatic U-Net segmentation method (intraclass correlation coefficient = 0.61, P < 0.001).

CONCLUSIONS

Our study demonstrated the feasibility of applying an existing model trained on cardiac cine data to dynamic cardiac perfusion data to achieve robust and automatic segmentation of the myocardium. The uncertainty estimates can be used for screening purposes, which would facilitate the cases with high endocardial and epicardial uncertainty estimates to be sent for further evaluation and correction by human experts.

Models and methods for analyzing DCE-MRI: a review

PURPOSE

To present a review of most commonly used techniques to analyze dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI), discusses their strengths and weaknesses, and outlines recent clinical applications of findings from these approaches.

METHODS

DCE-MRI allows for noninvasive quantitative analysis of contrast agent (CA) transient in soft tissues. Thus, it is an important and well-established tool to reveal microvasculature and perfusion in various clinical applications. In the last three decades, a host of nonparametric and parametric models and methods have been developed in order to quantify the CA's perfusion into tissue and estimate perfusion-related parameters (indexes) from signal- or concentration-time curves. These indexes are widely used in various clinical applications for the detection, characterization, and therapy monitoring of different diseases.

RESULTS

Promising theoretical findings and experimental results for the reviewed models and techniques in a variety of clinical applications suggest that DCE-MRI is a clinically relevant imaging modality, which can be used for early diagnosis of different diseases, such as breast and prostate cancer, renal rejection, and liver tumors.

CONCLUSIONS

Both nonparametric and parametric approaches for DCE-MRI analysis possess the ability to quantify tissue perfusion.