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For: Ziatdinov M, Dyck O, Li X, Sumpter BG, Jesse S, Vasudevan RK, Kalinin SV. Building and exploring libraries of atomic defects in graphene: Scanning transmission electron and scanning tunneling microscopy study. Sci Adv 2019;5:eaaw8989. [PMID: 31598551 PMCID: PMC6764837 DOI: 10.1126/sciadv.aaw8989] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Accepted: 09/04/2019] [Indexed: 05/24/2023]
Number Cited by Other Article(s)
1
Eliasson H, Erni R. Localization and segmentation of atomic columns in supported nanoparticles for fast scanning transmission electron microscopy. NPJ COMPUTATIONAL MATERIALS 2024;10:168. [PMID: 39104782 PMCID: PMC11297796 DOI: 10.1038/s41524-024-01360-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Accepted: 07/21/2024] [Indexed: 08/07/2024]
2
Cardoso Rial R. AI in analytical chemistry: Advancements, challenges, and future directions. Talanta 2024;274:125949. [PMID: 38569367 DOI: 10.1016/j.talanta.2024.125949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 03/09/2024] [Accepted: 03/17/2024] [Indexed: 04/05/2024]
3
Yang DH, Chu YS, Okello OFN, Seo SY, Moon G, Kim KH, Jo MH, Shin D, Mizoguchi T, Yang S, Choi SY. Full automation of point defect detection in transition metal dichalcogenides through a dual mode deep learning algorithm. MATERIALS HORIZONS 2024;11:747-757. [PMID: 37990857 DOI: 10.1039/d3mh01500a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2023]
4
Gui C, Zhang Z, Li Z, Luo C, Xia J, Wu X, Chu J. Deep learning analysis on transmission electron microscope imaging of atomic defects in two-dimensional materials. iScience 2023;26:107982. [PMID: 37810254 PMCID: PMC10551659 DOI: 10.1016/j.isci.2023.107982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/10/2023]  Open
5
Shao L, Ma J, Prelesnik JL, Zhou Y, Nguyen M, Zhao M, Jenekhe SA, Kalinin SV, Ferguson AL, Pfaendtner J, Mundy CJ, De Yoreo JJ, Baneyx F, Chen CL. Hierarchical Materials from High Information Content Macromolecular Building Blocks: Construction, Dynamic Interventions, and Prediction. Chem Rev 2022;122:17397-17478. [PMID: 36260695 DOI: 10.1021/acs.chemrev.2c00220] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
6
Ziatdinov M, Ghosh A, Wong CY, Kalinin SV. AtomAI framework for deep learning analysis of image and spectroscopy data in electron and scanning probe microscopy. NAT MACH INTELL 2022. [DOI: 10.1038/s42256-022-00555-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
7
Yao L, An H, Zhou S, Kim A, Luijten E, Chen Q. Seeking regularity from irregularity: unveiling the synthesis-nanomorphology relationships of heterogeneous nanomaterials using unsupervised machine learning. NANOSCALE 2022;14:16479-16489. [PMID: 36285804 DOI: 10.1039/d2nr03712b] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
8
Torres-Davila FE, Molinari M, Blair RG, Rochdi N, Tetard L. Enhancing Infrared Light-Matter Interaction for Deterministic and Tunable Nanomachining of Hexagonal Boron Nitride. NANO LETTERS 2022;22:8196-8202. [PMID: 36122311 DOI: 10.1021/acs.nanolett.2c02841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
9
Wang P, Ma X, Hao X, Tang B, Abudula A, Guan G. Oxygen vacancy defect engineering to promote catalytic activity toward the oxidation of VOCs: a critical review. CATALYSIS REVIEWS 2022. [DOI: 10.1080/01614940.2022.2078555] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
10
Dan J, Zhao X, Ning S, Lu J, Loh KP, He Q, Loh ND, Pennycook SJ. Learning motifs and their hierarchies in atomic resolution microscopy. SCIENCE ADVANCES 2022;8:eabk1005. [PMID: 35417228 PMCID: PMC9007509 DOI: 10.1126/sciadv.abk1005] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Accepted: 02/23/2022] [Indexed: 06/14/2023]
11
Carracedo-Cosme J, Romero-Muñiz C, Pou P, Pérez R. QUAM-AFM: A Free Database for Molecular Identification by Atomic Force Microscopy. J Chem Inf Model 2022;62:1214-1223. [PMID: 35234034 PMCID: PMC9942089 DOI: 10.1021/acs.jcim.1c01323] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
12
Treder KP, Huang C, Kim JS, Kirkland AI. Applications of deep learning in electron microscopy. Microscopy (Oxf) 2022;71:i100-i115. [DOI: 10.1093/jmicro/dfab043] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Revised: 08/30/2021] [Accepted: 11/08/2021] [Indexed: 12/25/2022]  Open
13
Leitherer A, Ziletti A, Ghiringhelli LM. Robust recognition and exploratory analysis of crystal structures via Bayesian deep learning. Nat Commun 2021;12:6234. [PMID: 34716341 PMCID: PMC8556392 DOI: 10.1038/s41467-021-26511-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 10/04/2021] [Indexed: 12/04/2022]  Open
14
Kalinin SV, Ziatdinov M, Hinkle J, Jesse S, Ghosh A, Kelley KP, Lupini AR, Sumpter BG, Vasudevan RK. Automated and Autonomous Experiments in Electron and Scanning Probe Microscopy. ACS NANO 2021;15:12604-12627. [PMID: 34269558 DOI: 10.1021/acsnano.1c02104] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
15
Azuri I, Rosenhek-Goldian I, Regev-Rudzki N, Fantner G, Cohen SR. The role of convolutional neural networks in scanning probe microscopy: a review. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2021;12:878-901. [PMID: 34476169 PMCID: PMC8372315 DOI: 10.3762/bjnano.12.66] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 07/23/2021] [Indexed: 05/13/2023]
16
Weatherley TFK, Liu W, Osokin V, Alexander DTL, Taylor RA, Carlin JF, Butté R, Grandjean N. Imaging Nonradiative Point Defects Buried in Quantum Wells Using Cathodoluminescence. NANO LETTERS 2021;21:5217-5224. [PMID: 34086468 DOI: 10.1021/acs.nanolett.1c01295] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
17
Wang DS, Haas M, Narang P. Quantum Interfaces to the Nanoscale. ACS NANO 2021;15:7879-7888. [PMID: 33999597 DOI: 10.1021/acsnano.1c01255] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
18
Yao X, Chen ZW, Liu GJ, Lang XY, Zhu YF, Gao W, Jiang Q. Steric Hindrance- and Work Function-Promoted High Performance for Electrochemical CO Methanation on Antisite Defects of MoS2 and WS2. CHEMSUSCHEM 2021;14:2255-2261. [PMID: 33851508 DOI: 10.1002/cssc.202100457] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 04/06/2021] [Indexed: 06/12/2023]
19
Qu EZ, Jimenez AM, Kumar SK, Zhang K. Quantifying Nanoparticle Assembly States in a Polymer Matrix through Deep Learning. Macromolecules 2021. [DOI: 10.1021/acs.macromol.0c02483] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
20
Kalinin SV, Dyck O, Jesse S, Ziatdinov M. Exploring order parameters and dynamic processes in disordered systems via variational autoencoders. SCIENCE ADVANCES 2021;7:eabd5084. [PMID: 33883126 DOI: 10.1126/sciadv.abd5084] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Accepted: 03/05/2021] [Indexed: 06/12/2023]
21
Ede JM. Deep learning in electron microscopy. MACHINE LEARNING: SCIENCE AND TECHNOLOGY 2021. [DOI: 10.1088/2632-2153/abd614] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
22
Wang DS, Ciccarino CJ, Flick J, Narang P. Hybridized Defects in Solid-State Materials as Artificial Molecules. ACS NANO 2021;15:5240-5248. [PMID: 33600145 DOI: 10.1021/acsnano.0c10601] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
23
Spurgeon SR, Ophus C, Jones L, Petford-Long A, Kalinin SV, Olszta MJ, Dunin-Borkowski RE, Salmon N, Hattar K, Yang WCD, Sharma R, Du Y, Chiaramonti A, Zheng H, Buck EC, Kovarik L, Penn RL, Li D, Zhang X, Murayama M, Taheri ML. Towards data-driven next-generation transmission electron microscopy. NATURE MATERIALS 2021;20:274-279. [PMID: 33106651 PMCID: PMC8485843 DOI: 10.1038/s41563-020-00833-z] [Citation(s) in RCA: 56] [Impact Index Per Article: 18.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
24
Hassanzadeh P. The capabilities of nanoelectronic 2-D materials for bio-inspired computing and drug delivery indicate their significance in modern drug design. Life Sci 2021;279:119272. [PMID: 33631171 DOI: 10.1016/j.lfs.2021.119272] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2020] [Revised: 02/10/2021] [Accepted: 02/19/2021] [Indexed: 12/13/2022]
25
Zhang H, Wang Y, Zuo S, Zhou W, Zhang J, Lou XWD. Isolated Cobalt Centers on W18O49 Nanowires Perform as a Reaction Switch for Efficient CO2 Photoreduction. J Am Chem Soc 2021;143:2173-2177. [PMID: 33508937 DOI: 10.1021/jacs.0c08409] [Citation(s) in RCA: 92] [Impact Index Per Article: 30.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
26
Maxim Z, Jesse S, Sumpter BG, Kalinin SV, Dyck O. Tracking atomic structure evolution during directed electron beam induced Si-atom motion in graphene via deep machine learning. NANOTECHNOLOGY 2021;32:035703. [PMID: 32932246 DOI: 10.1088/1361-6528/abb8a6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
27
Ziatdinov M, Zhang S, Dollar O, Pfaendtner J, Mundy CJ, Li X, Pyles H, Baker D, De Yoreo JJ, Kalinin SV. Quantifying the Dynamics of Protein Self-Organization Using Deep Learning Analysis of Atomic Force Microscopy Data. NANO LETTERS 2021;21:158-165. [PMID: 33306401 DOI: 10.1021/acs.nanolett.0c03447] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
28
Gordon OM, Hodgkinson JEA, Farley SM, Hunsicker EL, Moriarty PJ. Automated Searching and Identification of Self-Organized Nanostructures. NANO LETTERS 2020;20:7688-7693. [PMID: 32866019 DOI: 10.1021/acs.nanolett.0c03213] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
29
Yao L, Ou Z, Luo B, Xu C, Chen Q. Machine Learning to Reveal Nanoparticle Dynamics from Liquid-Phase TEM Videos. ACS CENTRAL SCIENCE 2020;6:1421-1430. [PMID: 32875083 PMCID: PMC7453571 DOI: 10.1021/acscentsci.0c00430] [Citation(s) in RCA: 66] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Indexed: 05/08/2023]
30
Kalinin SV, Dyck O, Balke N, Neumayer S, Tsai WY, Vasudevan R, Lingerfelt D, Ahmadi M, Ziatdinov M, McDowell MT, Strelcov E. Toward Electrochemical Studies on the Nanometer and Atomic Scales: Progress, Challenges, and Opportunities. ACS NANO 2019;13:9735-9780. [PMID: 31433942 DOI: 10.1021/acsnano.9b02687] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
31
Vasudevan RK, Choudhary K, Mehta A, Smith R, Kusne G, Tavazza F, Vlcek L, Ziatdinov M, Kalinin SV, Hattrick-Simpers J. Materials Science in the AI age: high-throughput library generation, machine learning and a pathway from correlations to the underpinning physics. MRS COMMUNICATIONS 2019;9:10.1557/mrc.2019.95. [PMID: 32166045 PMCID: PMC7067066 DOI: 10.1557/mrc.2019.95] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Accepted: 07/03/2019] [Indexed: 05/14/2023]
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