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For: Samuels ME, Bopp D, Colvin RA, Roscigno RF, Garcia-Blanco MA, Schedl P. RNA binding by Sxl proteins in vitro and in vivo. Mol Cell Biol 1994;14:4975-90. [PMID: 7516476 PMCID: PMC358869 DOI: 10.1128/mcb.14.7.4975-4990.1994] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
Number Cited by Other Article(s)
1
MicroSalmon: A Comprehensive, Searchable Resource of Predicted MicroRNA Targets and 3'UTR Cis-Regulatory Elements in the Full-Length Sequenced Atlantic Salmon Transcriptome. Noncoding RNA 2021;7:ncrna7040061. [PMID: 34698276 PMCID: PMC8544657 DOI: 10.3390/ncrna7040061] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 09/17/2021] [Accepted: 09/20/2021] [Indexed: 12/20/2022]  Open
2
Genomic and cDNA selection-amplification identifies transcriptome-wide binding sites for the Drosophila protein sex-lethal. PLoS One 2021;16:e0250592. [PMID: 34029324 PMCID: PMC8143406 DOI: 10.1371/journal.pone.0250592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 04/11/2021] [Indexed: 11/19/2022]  Open
3
Wang Y, Zhang L, Ren H, Ma L, Guo J, Mao D, Lu Z, Lu L, Yan D. Role of Hakai in m6A modification pathway in Drosophila. Nat Commun 2021;12:2159. [PMID: 33846330 PMCID: PMC8041851 DOI: 10.1038/s41467-021-22424-5] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Accepted: 03/14/2021] [Indexed: 12/13/2022]  Open
4
Tudor-domain containing protein 5-like promotes male sexual identity in the Drosophila germline and is repressed in females by Sex lethal. PLoS Genet 2019;15:e1007617. [PMID: 31329582 PMCID: PMC6645463 DOI: 10.1371/journal.pgen.1007617] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 06/26/2019] [Indexed: 11/19/2022]  Open
5
Morita S, Ando T, Maeno A, Mizutani T, Mase M, Shigenobu S, Niimi T. Precise staging of beetle horn formation in Trypoxylus dichotomus reveals the pleiotropic roles of doublesex depending on the spatiotemporal developmental contexts. PLoS Genet 2019;15:e1008063. [PMID: 30969957 PMCID: PMC6457530 DOI: 10.1371/journal.pgen.1008063] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 03/03/2019] [Indexed: 11/19/2022]  Open
6
Singh R. A Novel Saturation Mutagenesis Approach: Single Step Characterization of Regulatory Protein Binding Sites in RNA Using Phosphorothioates. J Vis Exp 2018. [PMID: 30199036 DOI: 10.3791/57816] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]  Open
7
Concentration and Localization of Coexpressed ELAV/Hu Proteins Control Specificity of mRNA Processing. Mol Cell Biol 2015;35:3104-15. [PMID: 26124284 DOI: 10.1128/mcb.00473-15] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2015] [Accepted: 06/10/2015] [Indexed: 01/25/2023]  Open
8
Duan J, Xu H, Guo H, O'Brochta DA, Wang F, Ma S, Zhang L, Zha X, Zhao P, Xia Q. New insights into the genomic organization and splicing of the doublesex gene, a terminal regulator of sexual differentiation in the silkworm Bombyx mori. PLoS One 2013;8:e79703. [PMID: 24244545 PMCID: PMC3820697 DOI: 10.1371/journal.pone.0079703] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2013] [Accepted: 09/24/2013] [Indexed: 11/18/2022]  Open
9
Ruiz MF, Sarno F, Zorrilla S, Rivas G, Sánchez L. Biochemical and functional analysis of Drosophila-sciara chimeric sex-lethal proteins. PLoS One 2013;8:e65171. [PMID: 23762307 PMCID: PMC3677924 DOI: 10.1371/journal.pone.0065171] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2013] [Accepted: 04/21/2013] [Indexed: 12/31/2022]  Open
10
Sex-lethal enables germline stem cell differentiation by down-regulating Nanos protein levels during Drosophila oogenesis. Proc Natl Acad Sci U S A 2012;109:9465-70. [PMID: 22645327 DOI: 10.1073/pnas.1120473109] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]  Open
11
Vargas DY, Shah K, Batish M, Levandoski M, Sinha S, Marras SAE, Schedl P, Tyagi S. Single-molecule imaging of transcriptionally coupled and uncoupled splicing. Cell 2012;147:1054-65. [PMID: 22118462 DOI: 10.1016/j.cell.2011.10.024] [Citation(s) in RCA: 146] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2010] [Revised: 06/28/2011] [Accepted: 10/24/2011] [Indexed: 12/18/2022]
12
Mullon C, Pomiankowski A, Reuter M. Molecular evolution of Drosophila Sex-lethal and related sex determining genes. BMC Evol Biol 2012;12:5. [PMID: 22244243 PMCID: PMC3292462 DOI: 10.1186/1471-2148-12-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2011] [Accepted: 01/14/2012] [Indexed: 12/23/2022]  Open
13
Path to facilitate the prediction of functional amino acid substitutions in red blood cell disorders--a computational approach. PLoS One 2011;6:e24607. [PMID: 21931771 PMCID: PMC3172254 DOI: 10.1371/journal.pone.0024607] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2011] [Accepted: 08/14/2011] [Indexed: 02/06/2023]  Open
14
The translation initiation factor eIF4E regulates the sex-specific expression of the master switch gene Sxl in Drosophila melanogaster. PLoS Genet 2011;7:e1002185. [PMID: 21829374 PMCID: PMC3145617 DOI: 10.1371/journal.pgen.1002185] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2010] [Accepted: 05/20/2011] [Indexed: 11/27/2022]  Open
15
Johnson ML, Nagengast AA, Salz HK. PPS, a large multidomain protein, functions with sex-lethal to regulate alternative splicing in Drosophila. PLoS Genet 2010;6:e1000872. [PMID: 20221253 PMCID: PMC2832672 DOI: 10.1371/journal.pgen.1000872] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2009] [Accepted: 02/03/2010] [Indexed: 12/25/2022]  Open
16
Functioning of the Drosophila Wilms'-tumor-1-associated protein homolog, Fl(2)d, in Sex-lethal-dependent alternative splicing. Genetics 2008;178:737-48. [PMID: 18245840 DOI: 10.1534/genetics.107.081679] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
17
Robida MD, Rahn A, Singh R. Genome-wide identification of alternatively spliced mRNA targets of specific RNA-binding proteins. PLoS One 2007;2:e520. [PMID: 17565373 PMCID: PMC1885218 DOI: 10.1371/journal.pone.0000520] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2007] [Accepted: 05/17/2007] [Indexed: 11/18/2022]  Open
18
Penn JKM, Schedl P. The master switch gene sex-lethal promotes female development by negatively regulating the N-signaling pathway. Dev Cell 2007;12:275-86. [PMID: 17276344 PMCID: PMC4362774 DOI: 10.1016/j.devcel.2007.01.009] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2006] [Revised: 11/16/2006] [Accepted: 01/17/2007] [Indexed: 10/23/2022]
19
Jolly C, Lakhotia SC. Human sat III and Drosophila hsr omega transcripts: a common paradigm for regulation of nuclear RNA processing in stressed cells. Nucleic Acids Res 2006;34:5508-14. [PMID: 17020918 PMCID: PMC1636489 DOI: 10.1093/nar/gkl711] [Citation(s) in RCA: 97] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
20
Gawande B, Robida MD, Rahn A, Singh R. Drosophila Sex-lethal protein mediates polyadenylation switching in the female germline. EMBO J 2006;25:1263-72. [PMID: 16511567 PMCID: PMC1422161 DOI: 10.1038/sj.emboj.7601022] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2005] [Accepted: 02/02/2006] [Indexed: 01/16/2023]  Open
21
Serna E, Gorab E, Ruiz MF, Goday C, Eirín-López JM, Sánchez L. The gene Sex-lethal of the Sciaridae family (order Diptera, suborder Nematocera) and its phylogeny in dipteran insects. Genetics 2005;168:907-21. [PMID: 15514063 PMCID: PMC1448812 DOI: 10.1534/genetics.104.031278] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
22
Penalva LOF, Sánchez L. RNA binding protein sex-lethal (Sxl) and control of Drosophila sex determination and dosage compensation. Microbiol Mol Biol Rev 2003;67:343-59, table of contents. [PMID: 12966139 PMCID: PMC193869 DOI: 10.1128/mmbr.67.3.343-359.2003] [Citation(s) in RCA: 125] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
23
Rajendra TK, Prasanth KV, Lakhotia SC. Male sterility associated with overexpression of the noncoding hsromega gene in cyst cells of testis of Drosophila melanogaster. J Genet 2001;80:97-110. [PMID: 11910129 DOI: 10.1007/bf02728335] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
24
Côté J, Dupuis S, Wu JY. Polypyrimidine track-binding protein binding downstream of caspase-2 alternative exon 9 represses its inclusion. J Biol Chem 2001;276:8535-43. [PMID: 11116151 PMCID: PMC2140227 DOI: 10.1074/jbc.m008924200] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
25
Yanowitz JL, Deshpande G, Calhoun G, Schedl PD. An N-terminal truncation uncouples the sex-transforming and dosage compensation functions of sex-lethal. Mol Cell Biol 1999;19:3018-28. [PMID: 10082569 PMCID: PMC84096 DOI: 10.1128/mcb.19.4.3018] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
26
Samuels M, Deshpande G, Schedl P. Activities of the Sex-lethal protein in RNA binding and protein:protein interactions. Nucleic Acids Res 1998;26:2625-37. [PMID: 9592147 PMCID: PMC147605 DOI: 10.1093/nar/26.11.2625] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]  Open
27
Chan RC, Black DL. The polypyrimidine tract binding protein binds upstream of neural cell-specific c-src exon N1 to repress the splicing of the intron downstream. Mol Cell Biol 1997;17:4667-76. [PMID: 9234723 PMCID: PMC232319 DOI: 10.1128/mcb.17.8.4667] [Citation(s) in RCA: 186] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
28
Kim I, Muto Y, Inoue M, Watanabe S, Kitamura A, Yokoyama S, Hosono K, Takaku H, Ono A, Kainosho M, Sakamoto H, Shimura Y. NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the Drosophila sex-lethal protein with target RNA fragments with site-specific [3-15N]uridine substitutions. Nucleic Acids Res 1997;25:1565-9. [PMID: 9092663 PMCID: PMC146625 DOI: 10.1093/nar/25.8.1565] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
29
Zhu C, Urano J, Bell LR. The Sex-lethal early splicing pattern uses a default mechanism dependent on the alternative 5' splice sites. Mol Cell Biol 1997;17:1674-81. [PMID: 9032294 PMCID: PMC231892 DOI: 10.1128/mcb.17.3.1674] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]  Open
30
Deshpande G, Samuels ME, Schedl PD. Sex-lethal interacts with splicing factors in vitro and in vivo. Mol Cell Biol 1996;16:5036-47. [PMID: 8756662 PMCID: PMC231505 DOI: 10.1128/mcb.16.9.5036] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]  Open
31
Sébillon P, Beldjord C, Kaplan JC, Brody E, Marie J. A T to G mutation in the polypyrimidine tract of the second intron of the human beta-globin gene reduces in vitro splicing efficiency: evidence for an increased hnRNP C interaction. Nucleic Acids Res 1995;23:3419-25. [PMID: 7567451 PMCID: PMC307219 DOI: 10.1093/nar/23.17.3419] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
32
Estes PA, Keyes LN, Schedl P. Multiple response elements in the Sex-lethal early promoter ensure its female-specific expression pattern. Mol Cell Biol 1995;15:904-17. [PMID: 7823955 PMCID: PMC231975 DOI: 10.1128/mcb.15.2.904] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
33
Sakashita E, Sakamoto H. Characterization of RNA binding specificity of the Drosophila sex-lethal protein by in vitro ligand selection. Nucleic Acids Res 1994;22:4082-6. [PMID: 7524034 PMCID: PMC331893 DOI: 10.1093/nar/22.20.4082] [Citation(s) in RCA: 46] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]  Open
34
The 5' leader of a chloroplast mRNA mediates the translational requirements for two nucleus-encoded functions in Chlamydomonas reinhardtii. Mol Cell Biol 1994. [PMID: 8035805 DOI: 10.1128/mcb.14.8.5268] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
35
Zerges W, Rochaix JD. The 5' leader of a chloroplast mRNA mediates the translational requirements for two nucleus-encoded functions in Chlamydomonas reinhardtii. Mol Cell Biol 1994;14:5268-77. [PMID: 8035805 PMCID: PMC359046 DOI: 10.1128/mcb.14.8.5268-5277.1994] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
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