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Fenech M, Holland N, Zeiger E, Chang PW, Kirsch-Volders M, Bolognesi C, Stopper H, Knudsen LE, Knasmueller S, Nersesyan A, Thomas P, Dhillon V, Deo P, Franzke B, Andreassi MG, Laffon B, Wagner KH, Norppa H, da Silva J, Volpi EV, Wilkins R, Bonassi S. Objectives and achievements of the HUMN project on its 26th anniversary. MUTATION RESEARCH. REVIEWS IN MUTATION RESEARCH 2024; 794:108511. [PMID: 39233049 DOI: 10.1016/j.mrrev.2024.108511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 08/22/2024] [Accepted: 08/26/2024] [Indexed: 09/06/2024]
Abstract
Micronuclei (MN) are a nuclear abnormality that occurs when chromosome fragments or whole chromosomes are not properly segregated during mitosis and consequently are excluded from the main nuclei and wrapped within nuclear membrane to form small nuclei. This maldistribution of genetic material leads to abnormal cellular genomes which may increase risk of developmental defects, cancers, and accelerated aging. Despite the potential importance of MN as biomarkers of genotoxicity, very little was known about the optimal way to measure MN in humans, the normal ranges of values of MN in healthy humans and the prospective association of MN with developmental and degenerative diseases prior to the 1980's. In the early 1980's two important methods to measure MN in humans were developed namely, the cytokinesis-block MN (CBMN) assay using peripheral blood lymphocytes and the Buccal MN assay that measures MN in epithelial cells from the oral mucosa. These discoveries greatly increased interest to use MN assays in human studies. In 1997 the Human Micronucleus (HUMN) project was founded to initiate an international collaboration to (i) harmonise and standardise the techniques used to perform the lymphocyte CBMN assay and the Buccal MN assay; (ii) establish and collate databases of MN frequency in human populations world-wide which also captured demographic, lifestyle and environmental genotoxin exposure data and (iii) use these data to identify the most important variables affecting MN frequency and to also determine whether MN predict disease risk. In this paper we briefly describe the achievements of the HUMN project during the period from the date of its foundation on 9th September 1997 until its 26th Anniversary in 2023, which included more than 200 publications and 23 workshops world-wide.
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Affiliation(s)
- Michael Fenech
- Health and Biomedical Innovation, UniSA Clinical and Health Sciences, University of South Australia, Adelaide 5000, Australia; Genome Health Foundation, North Brighton, SA 5048, Australia.
| | - Nina Holland
- Center for Environmental Research and Community Health (CERCH), University of California, Berkeley, Berkeley, CA, USA.
| | | | - Peter Wushou Chang
- Show Chwan Memorial Hospital, Changhwa, Taiwan; TUFTS University Medical School, Boston, USA.
| | - Micheline Kirsch-Volders
- Laboratory for Cell Genetics, Department Biology, Faculty of Sciences and Bio-engineering Sciences, Vrije Universiteit Brussel, Pleinlaan 2, Brussels 1050, Belgium.
| | - Claudia Bolognesi
- Environmental Carcinogenesis Unit, Ospedale Policlinico San Martino, Genoa, Italy.
| | - Helga Stopper
- Institute of Pharmacology and Toxicology, University of Würzburg, Würzburg 97080, Germany.
| | - Lisbeth E Knudsen
- Department of Public Health, Section of Environmental Health, University of Copenhagen, Copenhagen, Denmark.
| | - Siegfried Knasmueller
- Institute of Cancer Research, Department of Medicine I, Medical University of Vienna, Vienna, Austria.
| | - Armen Nersesyan
- Institute of Cancer Research, Department of Medicine I, Medical University of Vienna, Vienna, Austria.
| | - Philip Thomas
- CSIRO Health and Biosecurity, Adelaide 5000, Australia.
| | - Varinderpal Dhillon
- Health and Biomedical Innovation, UniSA Clinical and Health Sciences, University of South Australia, Adelaide 5000, Australia.
| | - Permal Deo
- Health and Biomedical Innovation, UniSA Clinical and Health Sciences, University of South Australia, Adelaide 5000, Australia.
| | - Bernhard Franzke
- Department of Nutritional Sciences, University of Vienna, Austria.
| | | | - Blanca Laffon
- Universidade da Coruña, Grupo DICOMOSA, CICA-Centro Interdisciplinar de Química e Bioloxía, Departamento de Psicología, Facultad de Ciencias de la Educación, and Instituto de Investigación Biomédica de A Coruña (INIBIC), Complexo Hospitalario Universitario de A Coruña (CHUAC), Sergas, A Coruña, Spain.
| | - Karl-Heinz Wagner
- Department of Nutritional Sciences, University of Vienna, Austria; Research Platform Active Ageing, University of Vienna, Austria.
| | - Hannu Norppa
- Finnish Institute of Occupational Health, Helsinki 00250, Finland.
| | - Juliana da Silva
- Laboratory of Genetic Toxicology, La Salle University (UniLaSalle), Canoas, RS 92010-000, Brazil; PPGBM, Federal University of Brazil (UFRGS), Porto Alegre 91501-970, Brazil.
| | - Emanuela V Volpi
- School of Life Sciences, University of Westminster, 115 New Cavendish Street, London W1W6UW, UK.
| | - Ruth Wilkins
- Environmental and Radiation Health Sciences Directorate, Health Canada 775 Brookfield Rd, Ottawa K1A 1C1, Canada.
| | - Stefano Bonassi
- Clinical and Molecular Epidemiology, IRCCS San Raffaele Roma, Rome 00166, Italy.
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Zuo S, Sasitharan V, Di Tanna GL, Vonk JM, De Vries M, Sherif M, Ádám B, Rivillas JC, Gallo V. Is exposure to pesticides associated with biological aging? A systematic review and meta-analysis. Ageing Res Rev 2024; 99:102390. [PMID: 38925480 DOI: 10.1016/j.arr.2024.102390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Revised: 06/18/2024] [Accepted: 06/19/2024] [Indexed: 06/28/2024]
Abstract
OBJECTIVE Exposure to pesticides is a risk factor for various diseases, yet its association with biological aging remains unclear. We aimed to systematically investigate the relationship between pesticide exposure and biological aging. METHODS PubMed, Embase and Web of Science were searched from inception to August 2023. Observational studies investigating the association between pesticide exposure and biomarkers of biological aging were included. Three-level random-effect meta-analysis was used to synthesize the data. Risk of bias was assessed by the Newcastle-Ottawa Scale. RESULTS Twenty studies evaluating the associations between pesticide exposure and biomarkers of biological aging in 10,368 individuals were included. Sixteen reported telomere length and four reported epigenetic clocks. Meta-analysis showed no statistically significant associations between pesticide exposure and the Hannum clock (pooled β = 0.27; 95 %CI: -0.25, 0.79), or telomere length (pooled Hedges'g = -0.46; 95 %CI: -1.10, 0.19). However, the opposite direction of effects for the two outcomes showed an indication of possible accelerated biological aging. After removal of influential effect sizes or low-quality studies, shorter telomere length was found in higher-exposed populations. CONCLUSION The existing evidence for associations between pesticide exposure and biological aging is limited due to the scarcity of studies on epigenetic clocks and the substantial heterogeneity across studies on telomere length. High-quality studies incorporating more biomarkers of biological aging, focusing more on active chemical ingredients of pesticides and accounting for potential confounders are needed to enhance our understanding of the impact of pesticides on biological aging.
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Affiliation(s)
- Shanshan Zuo
- University of Groningen, Campus Fryslân, Department of Sustainable Health, Leeuwarden, the Netherlands; University of Groningen, University Medical Center Groningen, Department of Epidemiology and Groningen Research Institute for Asthma and COPD, Groningen, the Netherlands.
| | | | - Gian Luca Di Tanna
- University of Applied Sciences and Arts of Southern Switzerland, Department of Business Economics, Health and Social Care, Lugano, Switzerland
| | - Judith M Vonk
- University of Groningen, University Medical Center Groningen, Department of Epidemiology and Groningen Research Institute for Asthma and COPD, Groningen, the Netherlands
| | - Maaike De Vries
- University of Groningen, University Medical Center Groningen, Department of Epidemiology and Groningen Research Institute for Asthma and COPD, Groningen, the Netherlands
| | - Moustafa Sherif
- United Arab Emirates University, College of Medicine and Health Sciences, Institute of Public Health, Al Ain, United Arab Emirates
| | - Balázs Ádám
- United Arab Emirates University, College of Medicine and Health Sciences, Institute of Public Health, Al Ain, United Arab Emirates
| | - Juan Carlos Rivillas
- Imperial College London, MRC Centre Environment and Health, School of Public Health, Department of Epidemiology and Biostatistics, London, United Kingdom
| | - Valentina Gallo
- University of Groningen, Campus Fryslân, Department of Sustainable Health, Leeuwarden, the Netherlands
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Chen Y, Guo Y, Wang C, Liu J, Jin L, Li Z, Ren A, Wang L. Chromium levels in placental tissue and neural tube defects: Association and mechanistic study. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 352:124126. [PMID: 38735460 DOI: 10.1016/j.envpol.2024.124126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 04/10/2024] [Accepted: 05/07/2024] [Indexed: 05/14/2024]
Abstract
Human exposure to chromium (Cr) is common but little is known about its adverse effects on pregnancy outcomes. This study aimed to explore the association between Cr exposure and the risk of neural tube defects (NTDs) and the underlying mechanisms of Cr-induced NTDs. 593 controls and 408 NTD cases with placentas were included in this study. Chromium trichloride (Cr(III)) and potassium dichromate (Cr(VI)) were intragastrically administered to pregnant mice and the number of NTDs was recorded. The odds ratio for total NTDs in the highest exposure group in placenta was 4.18 (95% confidence interval (CI), 1.97-8.84). The incidence of fetal NTDs in mice administered with Cr(III) showed a dose-response relationship. Cr(VI) didn't show teratogenicity of NTDs whereas increased the stillbirth rate. Prenatal exposure to Cr(III) increased levels of oxidative stress and apoptosis in fetal mice. RNA-sequencing results indicated significant enrichment of the MAPK pathway. RT-qPCR and Western blot analysis revealed that Cr(III) induced increased expression of p-JNK, p-P38, and Casp3. Toxicological effects can be partly antagonized by antioxidant supplementation. High chromium exposure was associated with increased human NTD risks. Excessive Cr(III) exposure can induce NTDs in fetal mice by increasing apoptosis through upgrading oxidative stress and then activating JNK/P38 MAPK signaling pathway.
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Affiliation(s)
- Yongyan Chen
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Yingnan Guo
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Chengrong Wang
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Jufen Liu
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Lei Jin
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Zhiwen Li
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Aiguo Ren
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China
| | - Linlin Wang
- Institute of Reproductive and Child Health/National Health Commission Key Laboratory of Reproductive Health, Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Centre, Beijing, China.
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Rohr P, Karen S, Francisco LFV, Oliveira MA, dos Santos Neto MF, Silveira HCS. Epigenetic processes involved in response to pesticide exposure in human populations: a systematic review and meta-analysis. ENVIRONMENTAL EPIGENETICS 2024; 10:dvae005. [PMID: 38779494 PMCID: PMC11110075 DOI: 10.1093/eep/dvae005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Revised: 03/27/2024] [Accepted: 04/19/2024] [Indexed: 05/25/2024]
Abstract
In recent decades, the use of pesticides in agriculture has increased dramatically. This has resulted in these substances being widely dispersed in the environment, contaminating both exposed workers and communities living near agricultural areas and via contaminated foodstuffs. In addition to acute poisoning, chronic exposure to pesticides can lead to molecular changes that are becoming better understood. Therefore, the aim of this study was to assess, through a systematic review of the literature, what epigenetic alterations are associated with pesticide exposure. We performed a systematic review and meta-analysis including case-control, cohort and cross-sectional observational epidemiological studies to verify the epigenetic changes, such as DNA methylation, histone modification and differential microRNA expression, in humans who had been exposed to any type of pesticide. Articles published between the years 2005 and 2020 were collected. Two different reviewers performed a blind selection of the studies using the Rayyan QCRI software. Post-completion, the data of selected articles were extracted and analyzed. Most of the 28 articles included evaluated global DNA methylation levels, and the most commonly reported epigenetic modification in response to pesticide exposure was global DNA hypomethylation. Meta-analysis revealed a significant negative correlation between Alu methylation levels and β-hexachlorocyclohexane, p,p'-dichlorodiphenyldichloroethane and p,p'-dichlorodiphenylethylene levels. In addition, some specific genes were reported to be hypermethylated in promoter regions, such as CDKN2AIGF2, WRAP53α and CDH1, while CDKN2B and H19 were hypomethylated due to pesticide exposure. The expression of microRNAs was also altered in response to pesticides, as miR-223, miR-518d-3p, miR-597, miR-517b and miR-133b that are associated with many human diseases. Therefore, this study provides evidence that pesticide exposure could lead to epigenetic modifications, possibly altering global and gene-specific methylation levels, epigenome-wide methylation and microRNA differential expression.
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Affiliation(s)
- Paula Rohr
- Molecular Oncology Research Center, Barretos Cancer Hospital, Rua Antenor Duarte Vilela, 1331, B. Dr. Paulo Prata, Barretos, SP 14784-390, Brazil
| | - Shimoyama Karen
- Molecular Oncology Research Center, Barretos Cancer Hospital, Rua Antenor Duarte Vilela, 1331, B. Dr. Paulo Prata, Barretos, SP 14784-390, Brazil
| | - Luiza Flávia Veiga Francisco
- Molecular Oncology Research Center, Barretos Cancer Hospital, Rua Antenor Duarte Vilela, 1331, B. Dr. Paulo Prata, Barretos, SP 14784-390, Brazil
| | - Marco Antônio Oliveira
- Molecular Oncology Research Center, Barretos Cancer Hospital, Rua Antenor Duarte Vilela, 1331, B. Dr. Paulo Prata, Barretos, SP 14784-390, Brazil
| | - Martins Fidelis dos Santos Neto
- Molecular Oncology Research Center, Barretos Cancer Hospital, Rua Antenor Duarte Vilela, 1331, B. Dr. Paulo Prata, Barretos, SP 14784-390, Brazil
| | - Henrique C S Silveira
- Molecular Oncology Research Center, Barretos Cancer Hospital, Rua Antenor Duarte Vilela, 1331, B. Dr. Paulo Prata, Barretos, SP 14784-390, Brazil
- Campus São Paulo, University of Anhanguera, São Paulo, SP 04119-901, Brazil
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Lin H, Qiang Z, Tse R, Tang SK, Pau G. A few-shot learning method for tobacco abnormality identification. FRONTIERS IN PLANT SCIENCE 2024; 15:1333236. [PMID: 38681219 PMCID: PMC11055634 DOI: 10.3389/fpls.2024.1333236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2023] [Accepted: 02/26/2024] [Indexed: 05/01/2024]
Abstract
Tobacco is a valuable crop, but its disease identification is rarely involved in existing works. In this work, we use few-shot learning (FSL) to identify abnormalities in tobacco. FSL is a solution for the data deficiency that has been an obstacle to using deep learning. However, weak feature representation caused by limited data is still a challenging issue in FSL. The weak feature representation leads to weak generalization and troubles in cross-domain. In this work, we propose a feature representation enhancement network (FREN) that enhances the feature representation through instance embedding and task adaptation. For instance embedding, global max pooling, and global average pooling are used together for adding more features, and Gaussian-like calibration is used for normalizing the feature distribution. For task adaptation, self-attention is adopted for task contextualization. Given the absence of publicly available data on tobacco, we created a tobacco leaf abnormality dataset (TLA), which includes 16 categories, two settings, and 1,430 images in total. In experiments, we use PlantVillage, which is the benchmark dataset for plant disease identification, to validate the superiority of FREN first. Subsequently, we use the proposed method and TLA to analyze and discuss the abnormality identification of tobacco. For the multi-symptom diseases that always have low accuracy, we propose a solution by dividing the samples into subcategories created by symptom. For the 10 categories of tomato in PlantVillage, the accuracy achieves 66.04% in 5-way, 1-shot tasks. For the two settings of the tobacco leaf abnormality dataset, the accuracies were achieved at 45.5% and 56.5%. By using the multisymptom solution, the best accuracy can be lifted to 60.7% in 16-way, 1-shot tasks and achieved at 81.8% in 16-way, 10-shot tasks. The results show that our method improves the performance greatly by enhancing feature representation, especially for tasks that contain categories with high similarity. The desensitization of data when crossing domains also validates that the FREN has a strong generalization ability.
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Affiliation(s)
- Hong Lin
- College of Big Data and Intelligent Engineering, Southwest Forestry University, Kunming, China
- Faculty of Applied Sciences, Macao Polytechnic University, Macao, Macao SAR, China
| | - Zhenping Qiang
- College of Big Data and Intelligent Engineering, Southwest Forestry University, Kunming, China
| | - Rita Tse
- Faculty of Applied Sciences, Macao Polytechnic University, Macao, Macao SAR, China
| | - Su-Kit Tang
- Faculty of Applied Sciences, Macao Polytechnic University, Macao, Macao SAR, China
| | - Giovanni Pau
- Department of Computer Science and Engineering, University of Bologna, Bologna, Italy
- Samueli Computer Science Department, University of California, Los Angeles, Los Angeles, CA, United States
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Guedes Pinto T, da Silva GN, Renno ACM, Salvadori DMF, Ribeiro DA. The impact of genetic polymorphisms on genotoxicity in workers occupationally exposed to pesticides: a systematic review. Toxicol Mech Methods 2024; 34:237-244. [PMID: 37982319 DOI: 10.1080/15376516.2023.2280806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Accepted: 11/02/2023] [Indexed: 11/21/2023]
Abstract
In a world with a rising use of pesticides, these chemicals, although designed to effectively control pests, pose potential threats to the environment and non-target organisms, including humans. Thus, this systematic review aims to investigate a possible association between genetic polymorphisms and susceptibility and genotoxicity in individuals occupationally exposed to pesticides. This review was conducted following the 2020 Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) criteria. A total of 14 carefully selected studies were thoroughly analyzed by two reviewers, who assigned scores based on previously set evaluation criteria. This study classified over half of the chosen studies as having moderate or strong quality, observing a correlation between certain genetic polymorphisms involved in xenobiotic metabolism and genotoxicity in workers exposed to pesticides. Results suggest that the genes associated with xenobiotic metabolism play a substantial role in determining individuals' susceptibility to genomic damage due to pesticide exposure, affecting both their peripheral blood and oral mucosa. This implies that individuals with specific genotypes may experience increased or decreased levels of DNA damage when exposed to these chemicals.
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Affiliation(s)
- Thiago Guedes Pinto
- Department of Biosciences, Institute of Health and Society, Federal University of São Paulo, UNIFESP, Santos, Brazil
| | - Glenda Nicioli da Silva
- Department of Clinical Analysis, School of Pharmacy, Federal University of Ouro Preto, UFOP, Ouro Preto, Brazil
| | - Ana Claudia Muniz Renno
- Department of Biosciences, Institute of Health and Society, Federal University of São Paulo, UNIFESP, Santos, Brazil
| | | | - Daniel Araki Ribeiro
- Department of Biosciences, Institute of Health and Society, Federal University of São Paulo, UNIFESP, Santos, Brazil
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Santos KR, Galter IN, Grecco KD, Silva EZM, Lascola MB, Dos Santos SN, Aragão FB, Arrivabene HP, Milanez CRD, Fernandes MN, Matsumoto ST. Toxicogenetic, biochemical, and anatomical effects of the herbicide Clethodim on Allium cepa L. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:125388-125397. [PMID: 38001291 DOI: 10.1007/s11356-023-31048-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 11/09/2023] [Indexed: 11/26/2023]
Abstract
Pesticides are compounds with several chemical or biological agents developed to potentiate the biocide action. Their use is associated with increased economic and agricultural productivity worldwide but can harm health and the environment, damaging existing biota. Clethodim is a systemic post-emergent herbicide for grasses, highly selective for cotton, coffee, onions, carrots, soybeans, etc. Therefore, this work aimed to evaluate the harmful effect of the herbicide Clethodim with the model plant Allium cepa. A series of tests were conducted to evaluate the effects of the herbicide under study. Germination tests, root growth, cell, and nucleolar cycle analysis, as well as oxidative stress assessment and histological analysis of the roots, were performed. The results indicated that the herbicide demonstrated phytotoxicity, inhibiting germination at C1 (1.92 g/L) and C3 (0.84 g/L), and root growth at all concentrations, presenting mutagenicity at C1 (1.92 g/L) and C4 (0.24 g/L), evidenced by the increased frequency of micronuclei. In addition, changes were observed in the enzymatic activity of the enzymes catalase at concentrations C1 (1.92 g/L) and C2 (0.96 g/L) and ascorbate peroxidase at concentrations C1 (1.92 g/L), C2 (0. 96 g/L), and C3 (0.48 g/L) and in cell elongation at concentrations C1 (1.92 g/L) and C3 (0.48 g/L), demonstrated in histological analyses of the root apex.
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Affiliation(s)
- Kristian Rodolfo Santos
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil.
| | - Iasmini Nicoli Galter
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Kalia Dável Grecco
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Enzo Zini Moreira Silva
- In Vitro (Eco)Toxicology Laboratory, Department of Genetics, Center for Biological Sciences, Federal University of Paraná, Av. Cel. Francisco H. Dos Santos, 100, Curitiba, Paraná, PR, 81530-000, Brazil
| | - Mylena Boeque Lascola
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Sara Nascimento Dos Santos
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Francielen Barroso Aragão
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Hiulana Pereira Arrivabene
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Camilla Rozindo Dias Milanez
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
| | - Marisa Narciso Fernandes
- Laboratory of Comparative Zoophysiology and Biochemistry, Department of Physiological Sciences, Center for Biological and Health Sciences, Federal University of São Carlos, Rodovia Washington Luiz, Km 235 Monjolinho São Carlos, São Paulo, SP, 13565-905, Brazil
| | - Silvia Tamie Matsumoto
- In Vitro and In Vivo Mutagenesis Laboratory, Department of Biological Sciences, Center for Human and Natural Sciences, Federal University of Espírito Santo, Av. Fernando Ferrari, 514, Goiabeiras, Vitória, ES, 29075-910, Brazil
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Jiménez-Garza O, Ghosh M, Barrow TM, Godderis L. Toxicomethylomics revisited: A state-of-the-science review about DNA methylation modifications in blood cells from workers exposed to toxic agents. Front Public Health 2023; 11:1073658. [PMID: 36891347 PMCID: PMC9986591 DOI: 10.3389/fpubh.2023.1073658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 01/25/2023] [Indexed: 02/22/2023] Open
Abstract
Introduction Epigenetic marks have been proposed as early changes, at the subcellular level, in disease development. To find more specific biomarkers of effect in occupational exposures to toxicants, DNA methylation studies in peripheral blood cells have been performed. The goal of this review is to summarize and contrast findings about DNA methylation in blood cells from workers exposed to toxicants. Methods A literature search was performed using PubMed and Web of Science. After first screening, we discarded all studies performed in vitro and in experimental animals, as well as those performed in other cell types other than peripheral blood cells. Results: 116 original research papers met the established criteria, published from 2007 to 2022. The most frequent investigated exposures/labor group were for benzene (18.9%) polycyclic aromatic hydrocarbons (15.5%), particulate matter (10.3%), lead (8.6%), pesticides (7.7%), radiation (4.3%), volatile organic compound mixtures (4.3%), welding fumes (3.4%) chromium (2.5%), toluene (2.5%), firefighters (2.5%), coal (1.7%), hairdressers (1.7%), nanoparticles (1.7%), vinyl chloride (1.7%), and others. Few longitudinal studies have been performed, as well as few of them have explored mitochondrial DNA methylation. Methylation platforms have evolved from analysis in repetitive elements (global methylation), gene-specific promoter methylation, to epigenome-wide studies. The most reported observations were global hypomethylation as well as promoter hypermethylation in exposed groups compared to controls, while methylation at DNA repair/oncogenes genes were the most studied; studies from genome-wide studies detect differentially methylated regions, which could be either hypo or hypermethylated. Discussion Some evidence from longitudinal studies suggest that modifications observed in cross-sectional designs may be transitory; then, we cannot say that DNA methylation changes are predictive of disease development due to those exposures. Conclusion Due to the heterogeneity in the genes studied, and scarcity of longitudinal studies, we are far away from considering DNA methylation changes as biomarkers of effect in occupational exposures, and nor can we establish a clear functional or pathological correlate for those epigenetic modifications associated with the studied exposures.
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Affiliation(s)
- Octavio Jiménez-Garza
- Health Sciences Institute, Autonomous University of Hidalgo State, Pachuca Hidalgo, Mexico
| | - Manosij Ghosh
- Environment and Health Department, Katholieke Universiteit Leuven, Leuven, Belgium
| | - Timothy M Barrow
- Faculty of Health Sciences and Wellbeing, University of Sunderland, Sunderland, United Kingdom
| | - Lode Godderis
- Environment and Health Department, Katholieke Universiteit Leuven, Leuven, Belgium
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Passos JDC, Felisbino K, Laureano HA, Guiloski IC. Occupational exposure to pesticides and its association with telomere length - A systematic review and meta-analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 849:157715. [PMID: 35914599 DOI: 10.1016/j.scitotenv.2022.157715] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 07/19/2022] [Accepted: 07/26/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND Telomere length is a common biomarker for the cumulative effect of environmental factors on aging-related diseases, therefore an association has been hypothesized between occupational exposure to pesticides and shorter telomere length. OBJECTIVE This study is a systematic review and meta-analysis aiming to examine the association between telomere length and occupational exposure to pesticides. METHODS We systematically searched in SciELO, PubMed, Scopus, Embase, Cochrane, Lilacs, Science Direct, and Web of Science databases for all observational studies containing measurements of telomere length on groups occupationally exposed to pesticides. Data were synthesized through qualitative synthesis and meta-analysis. We estimated the associations between exposed and non-exposed groups by using the natural log of the response ratio (lnRR). Heterogeneity was quantified using the Cochran Q test and I2 statistics. RESULTS Six studies were included in the qualitative synthesis and meta-analysis, with a total of 480 participants exposed to pesticides. The time of exposure evaluated 391 participants that had a range of 5 to >30 years of occupational exposure. Most studies presented shorter telomere length in the occupationally exposed group. From the six studies included in the meta-analysis, three presented telomere length measurement as a single copy gene (T/S), and three presented telomere length measurement as base pairs (bp). The statistical analysis pooled estimates (log ratio of means) of the telomere length in both measurements (T/S and bp) showed a shortening of telomere length in the exposed group when compared with the non-exposed (control) group. Two of six studies reported longer telomere length in the group exposed to pesticides. DISCUSSION Our findings suggest an association between occupational exposure to pesticides and shorter telomere length. However, we found a small number of studies to include in our meta-analysis, being required more high-quality studies to strengthen our findings and conclusions.
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Affiliation(s)
- Jaqueline Dal Curtivo Passos
- Faculdades Pequeno Príncipe, Curitiba, Paraná, Brazil; Instituto de Pesquisa Pelé Pequeno Príncipe, Curitiba, Paraná, Brazil.
| | - Karoline Felisbino
- Faculdades Pequeno Príncipe, Curitiba, Paraná, Brazil; Instituto de Pesquisa Pelé Pequeno Príncipe, Curitiba, Paraná, Brazil
| | | | - Izonete Cristina Guiloski
- Faculdades Pequeno Príncipe, Curitiba, Paraná, Brazil; Instituto de Pesquisa Pelé Pequeno Príncipe, Curitiba, Paraná, Brazil
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10
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Zúñiga-Venegas LA, Hyland C, Muñoz-Quezada MT, Quirós-Alcalá L, Butinof M, Buralli R, Cardenas A, Fernandez RA, Foerster C, Gouveia N, Gutiérrez Jara JP, Lucero BA, Muñoz MP, Ramírez-Santana M, Smith AR, Tirado N, van Wendel de Joode B, Calaf GM, Handal AJ, Soares da Silva A, Cortés S, Mora AM. Health Effects of Pesticide Exposure in Latin American and the Caribbean Populations: A Scoping Review. ENVIRONMENTAL HEALTH PERSPECTIVES 2022; 130:96002. [PMID: 36173136 PMCID: PMC9521041 DOI: 10.1289/ehp9934] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2021] [Revised: 08/08/2022] [Accepted: 08/12/2022] [Indexed: 05/23/2023]
Abstract
BACKGROUND Multiple epidemiological studies have shown that exposure to pesticides is associated with adverse health outcomes. However, the literature on pesticide-related health effects in the Latin American and the Caribbean (LAC) region, an area of intensive agricultural and residential pesticide use, is sparse. We conducted a scoping review to describe the current state of research on the health effects of pesticide exposure in LAC populations with the goal of identifying knowledge gaps and research capacity building needs. METHODS We searched PubMed and SciELO for epidemiological studies on pesticide exposure and human health in LAC populations published between January 2007 and December 2021. We identified 233 publications from 16 countries that met our inclusion criteria and grouped them by health outcome (genotoxicity, neurobehavioral outcomes, placental outcomes and teratogenicity, cancer, thyroid function, reproductive outcomes, birth outcomes and child growth, and others). RESULTS Most published studies were conducted in Brazil (37%, n = 88 ) and Mexico (20%, n = 46 ), were cross-sectional in design (72%, n = 167 ), and focused on farmworkers (45%, n = 105 ) or children (21%, n = 48 ). The most frequently studied health effects included genotoxicity (24%, n = 62 ) and neurobehavioral outcomes (21%, n = 54 ), and organophosphate (OP) pesticides were the most frequently examined (26%, n = 81 ). Forty-seven percent (n = 112 ) of the studies relied only on indirect pesticide exposure assessment methods. Exposure to OP pesticides, carbamates, or to multiple pesticide classes was consistently associated with markers of genotoxicity and adverse neurobehavioral outcomes, particularly among children and farmworkers. DISCUSSION Our scoping review provides some evidence that exposure to pesticides may adversely impact the health of LAC populations, but methodological limitations and inconsistencies undermine the strength of the conclusions. It is critical to increase capacity building, integrate research initiatives, and conduct more rigorous epidemiological studies in the region to address these limitations, better inform public health surveillance systems, and maximize the impact of research on public policies. https://doi.org/10.1289/EHP9934.
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Affiliation(s)
- Liliana A. Zúñiga-Venegas
- Centro de Investigaciones de Estudios Avanzados del Maule, Universidad Católica del Maule, Talca, Chile
| | - Carly Hyland
- Center for Environmental Research and Community Health, School of Public Health, University of California, Berkeley, Berkeley, California, USA
- School of Public Health and Population Science, Boise State University, Boise, Idaho, USA
| | - María Teresa Muñoz-Quezada
- Centro de Investigación en Neuropsicología y Neurociencias Cognitivas, Facultad de Ciencias de la Salud, Universidad Católica del Maule, Talca, Chile
| | - Lesliam Quirós-Alcalá
- Department of Environmental Health and Engineering, Bloomberg School of Public Health, John Hopkins University, Baltimore, Maryland, USA
- Maryland Institute of Applied Environmental Health, School of Public Health, University of Maryland, College Park, Maryland, USA
| | - Mariana Butinof
- Facultad de Ciencias Médicas, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Rafael Buralli
- Departamento de Saúde Ambiental, Faculdade de Saúde Pública, Universidade de São Paulo, São Paulo, Brasil
| | - Andres Cardenas
- Center for Environmental Research and Community Health, School of Public Health, University of California, Berkeley, Berkeley, California, USA
| | - Ricardo A. Fernandez
- Facultad de Ciencias de la Salud, Universidad Católica de Córdoba, Córdoba, Argentina
| | - Claudia Foerster
- Instituto de Ciencias de la Agroalimentarias, Animales y Ambientales, Universidad de O’Higgins, San Fernando, Chile
| | - Nelson Gouveia
- Departamento de Medicina Preventiva, Faculdade de Medicina, Universidade de São Paulo, São Paulo, Brasil
| | - Juan P. Gutiérrez Jara
- Centro de Investigaciones de Estudios Avanzados del Maule, Universidad Católica del Maule, Talca, Chile
| | - Boris A. Lucero
- Centro de Investigación en Neuropsicología y Neurociencias Cognitivas, Facultad de Ciencias de la Salud, Universidad Católica del Maule, Talca, Chile
| | - María Pía Muñoz
- Escuela de Salud Pública, Facultad de Medicina, Universidad de Chile, Santiago, Chile
| | - Muriel Ramírez-Santana
- Departamento de Salud Pública, Facultad de Medicina, Universidad Católica del Norte, Coquimbo, Chile
| | - Anna R. Smith
- Center for Environmental Research and Community Health, School of Public Health, University of California, Berkeley, Berkeley, California, USA
| | - Noemi Tirado
- Instituto de Genética, Facultad de Medicina, Universidad Mayor de San Andrés, Louisiana Paz, Bolivia
| | - Berna van Wendel de Joode
- Infants’ Environmental Health Study, Central American Institute for Studies on Toxic Substances, Universidad Nacional, Heredia, Costa Rica
| | - Gloria M. Calaf
- Instituto de Alta Investigación, Universidad de Tarapacá, Arica, Chile
- Columbia University Medical Center, New York, New York, USA
| | - Alexis J. Handal
- Department of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA
| | | | - Sandra Cortés
- Centro Avanzado de Enfermedades Crónicas (ACCDiS), Centro de Desarrollo Urbano Sustentable, Departamento de Salud Pública, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Ana M. Mora
- Center for Environmental Research and Community Health, School of Public Health, University of California, Berkeley, Berkeley, California, USA
- Infants’ Environmental Health Study, Central American Institute for Studies on Toxic Substances, Universidad Nacional, Heredia, Costa Rica
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11
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Arbo MD, Garcia SC, Sarpa M, Da Silva Junior FM, Nascimento SN, Garcia ALH, Da Silva J. Brazilian workers occupationally exposed to different toxic agents: A systematic review on DNA damage. MUTATION RESEARCH/GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS 2022; 879-880:503519. [PMID: 35914865 DOI: 10.1016/j.mrgentox.2022.503519] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 04/23/2022] [Accepted: 06/21/2022] [Indexed: 10/17/2022]
Abstract
The evaluation of genotoxicity in workers exposed to different toxic agents is very important, especially considering the association between these exposures in a chronic context and DNA damage. Assessing biomarkers of exposure and, when possible, early biomarkers of effect, contributes to elucidating the potential toxic mechanisms involved in genotoxicity and its contribution to chronic non-communicable diseases. In Brazil, the biggest country in South America, workers are exposed to hazardous physical and chemical agents. Considering that these exposures occur, in most cases, throughout the worker's whole life, this is an important public health concern in Brazil. Therefore, this systematic review aims to analyze occupational exposure to chemical and physical agents and the association with DNA damage in studies carried out in Brazil from 1980 to 2021. A systematic and comprehensive literature search was performed in different databases based on occupational exposure to chemical and physical agents and DNA damage. Only full articles on studies that investigated experimental evidence on occupational exposure in Brazil and assessed DNA damage were included, amounting to 89 articles. Five main occupational exposure groups were identified: pesticides (36%), organic solvents (20%), dust and particles (16%), metals (11%), and ionizing radiation (6%). Another group called "others" included studies (11%) that did not fall into these main groups. It was found that comet assay and micronucleus tests are the most adopted methods to detect DNA damage. Occupational exposures were most associated with DNA damage. However, further improvements in study design would be needed to better characterize the association between biomonitoring and DNA damage, particularly to account for confounding factors.
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12
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Garcia ALH, Matzenbacher CA, Soares S, Rohr P, da Silva J. Fluorosilicic acid and cotinine, separately and in combination, induce genotoxicity and telomeric reduction in human osteoblast cell line MG63. MUTATION RESEARCH. GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS 2022; 876-877:503474. [PMID: 35483789 DOI: 10.1016/j.mrgentox.2022.503474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2021] [Revised: 02/07/2022] [Accepted: 02/14/2022] [Indexed: 06/14/2023]
Abstract
Skeletal fluorosis is a severe case in which bone deformations and bone tissue weakening occur due to excessive fluorine deposition. Recently, data on smoking have been published that smoke constituents can indirectly influence bone mass and interfere in the metabolism of fluorides in humans. Thus, the present in vitro study aimed to assess the genetic instability in human osteoblast MG63 cells exposed to fluorosilicic acid (FA) and cotinine (COT), separately and in combination, in concentrations found in human plasma. For this, cell cytotoxicity was performed by MTT assay; DNA damage was performed by alkaline comet assay (CA), modified by repair endonucleases (+FPG); micronuclei test (MN) using CBMN-Cyt assay; and telomere length (TL) by qPCR in MG63 cells. No cytotoxicity was observed for all concentrations tested in this study. Alkaline CA results showed a significant increase in DNA damage at all FA concentrations (0.03125-0.300 mg/L), in the two highest concentrations of COT (125 and 250 ng/mL), and the highest concentration of FA+COT (0.300 mg/L+250 ng/mL). Alkaline CA+FPG test was used to detect oxidized nucleobases, which occurred at the two highest concentrations of FA, COT, and FA+COT. Micronuclei test showed an increase in the frequency of MN at all concentrations of FA (0.075-0.300 mg/L) except in the lowest concentration (0.03125 mg/L), in the two highest concentrations of COT (125 and 250 ng/mL), and all concentrations of FA+COT. There was no significant difference in nuclear division index, binucleated cells, nucleoplasmic bridge, and nuclear bud. A TL reduction was observed in cells treated with the highest concentrations of FA alone (0.300 mg/L) and FA+COT (0.300 mg/L+250 ng/mL). Finally, our study showed that FA and COT (mainly alone) at concentrations found in human plasma induced oxidative damage and genetic instability in human osteoblast cells.
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Affiliation(s)
- Ana L H Garcia
- Lutheran University of Brazil (ULBRA), Laboratory of Genetic Toxicology, PPGBioSaúde (Postgraduate Program in Cellular and Molecular Biology Applied to Health) and PPGGTA (Postgraduate Program in Genetics and Applied Toxicology), 92425-900, Canoas, RS, Brazil; Laboratory of Genetic Toxicology, La Salle University (UniLaSalle), Canoas, RS, Brazil.
| | - Cristina A Matzenbacher
- Federal University of Rio Grande do Sul, Department of Genetics, C.P. 15053, 91501-970 Porto Alegre, RS, Brazil
| | - Solange Soares
- Lutheran University of Brazil (ULBRA), Laboratory of Genetic Toxicology, PPGBioSaúde (Postgraduate Program in Cellular and Molecular Biology Applied to Health) and PPGGTA (Postgraduate Program in Genetics and Applied Toxicology), 92425-900, Canoas, RS, Brazil
| | - Paula Rohr
- Molecular Oncology Research Center, Barretos Cancer Hospital, Barretos, São Paulo, Brazil
| | - Juliana da Silva
- Lutheran University of Brazil (ULBRA), Laboratory of Genetic Toxicology, PPGBioSaúde (Postgraduate Program in Cellular and Molecular Biology Applied to Health) and PPGGTA (Postgraduate Program in Genetics and Applied Toxicology), 92425-900, Canoas, RS, Brazil; Laboratory of Genetic Toxicology, La Salle University (UniLaSalle), Canoas, RS, Brazil.
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13
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Kahl VFS, da Silva J. Inorganic elements in occupational settings: A review on the effects on telomere length and biology. MUTATION RESEARCH. GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS 2021; 872:503418. [PMID: 34798938 DOI: 10.1016/j.mrgentox.2021.503418] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2021] [Revised: 08/31/2021] [Accepted: 10/15/2021] [Indexed: 06/13/2023]
Abstract
The past decades have shown that telomere crisis is highly affected by external factors. Effects of human exposure to xenobiotics on telomere length (TL), particularly in their workplace, have been largely studied. TL has been shown to be an efficient biomarker in occupational risk assessment. This is the first review focusing on studies about the effects on TL from occupational exposures to metals (lead [Pb] and mixtures), and particulate matter (PM) related to inorganic elements. Data from 15 studies were evaluated regarding occupational exposure to metals and PM-associated inorganic elements and impact on TL. Potential complementary analyses and subjects' background (age, length of employment and gender) were also assessed. There was limited information on the correlations between work length and TL dynamics, and that was also true for the correlation between age and TL. Results indicated that TL is affected differently across the types of occupational exposure investigated in this review, and even within the same exposure, a variety of effects can be observed. Fifty-three percent of the studies observed decreased TL in occupational exposure among welding fumes, open-cast coal mine, Pb and PM industries workers. Two studies focused particularly on the levels of metals and association with TL, and both linear and non-linear associations were found. Interestingly, TL modifications were accompanied by increase in DNA damage in 7 out of 8 studies that investigated it, measured either by Cytokinesis-block Micronucleus Assay or Comet assay. Five studies also investigated oxidative stress parameters, and 4 of them found increased levels of oxidative damage along with TL impairment. Oxidative stress is one of the main mechanisms by which telomeres are affected due to their high guanine content. Our review highlights the need of further studies accessing TL in simultaneous occupational exposure to mixtures of xenobiotics.
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Affiliation(s)
- Vivian F Silva Kahl
- The University of Queensland Diamantina Institute, The University of Queensland, Faculty of Medicine, 37 Kent Street, Woolloongabba, Queensland 4102, Australia; Translational Research Institute, 37 Kent Street, Woolloongabba, Queensland 4102, Australia.
| | - Juliana da Silva
- Laboratory of Genetic Toxicology, Post Graduate Program in Cellular and Molecular Biology Applied to Health, Lutheran University of Brazil, Av Farroupilha 8001, Canoas, Rio Grande do Sul, 92425-900, Brazil; LaSalle University (UniLaSalle), Av Victor Barreto 2288, Canoas, Rio Grande do Sul, 92010-000, Brazil.
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14
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Fernandes SG, Dsouza R, Khattar E. External environmental agents influence telomere length and telomerase activity by modulating internal cellular processes: Implications in human aging. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2021; 85:103633. [PMID: 33711516 DOI: 10.1016/j.etap.2021.103633] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2020] [Revised: 01/30/2021] [Accepted: 03/05/2021] [Indexed: 06/12/2023]
Abstract
External environment affects cellular physiological processes and impact the stability of our genome. The most important structural components of our linear chromosomes which endure the impact by these agents, are the chromosomal ends called telomeres. Telomeres preserve the integrity of our genome by preventing end to end fusions and telomeric loss through by inhibiting DNA damage response (DDR) activation. This is accomplished by the presence of a six membered shelterin complex at telomeres. Further, telomeres cannot be replicated by normal DNA polymerase and require a special enzyme called telomerase which is expressed only in stem cells, few immune cells and germ cells. Telomeres are rich in guanine content and thus become extremely prone to damage arising due to physiological processes like oxidative stress and inflammation. External environmental factors which includes various physical, biological and chemical agents also affect telomere homeostasis by increasing oxidative stress and inflammation. In the present review, we highlight the effect of these external factors on telomerase activity and telomere length. We also discuss how the external agents affect the physiological processes, thus modulating telomere stability. Further, we describe its implication in the development of aging and its related pathologies.
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Affiliation(s)
- Stina George Fernandes
- Sunandan Divatia School of Science, SVKM's NMIMS (Deemed to be University), Vile Parle West, Mumbai, 400056, India
| | - Rebecca Dsouza
- Sunandan Divatia School of Science, SVKM's NMIMS (Deemed to be University), Vile Parle West, Mumbai, 400056, India
| | - Ekta Khattar
- Sunandan Divatia School of Science, SVKM's NMIMS (Deemed to be University), Vile Parle West, Mumbai, 400056, India.
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15
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Woźniak E, Reszka E, Jabłońska E, Michałowicz J, Huras B, Bukowska B. Glyphosate and AMPA Induce Alterations in Expression of Genes Involved in Chromatin Architecture in Human Peripheral Blood Mononuclear Cells (In Vitro). Int J Mol Sci 2021; 22:2966. [PMID: 33803994 PMCID: PMC7998550 DOI: 10.3390/ijms22062966] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 03/07/2021] [Accepted: 03/12/2021] [Indexed: 12/14/2022] Open
Abstract
We have determined the effect of glyphosate and aminomethylphosphonic acid (AMPA) on expression of genes involved in chromatin architecture in human peripheral blood mononuclear cells (PBMCs). The cells were incubated with glyphosate and AMPA in the concentrations ranging from 0.5 to 100 μM and from 0.5, to 250 μM, respectively. The expression profile of the following genes by quantitative Real-Time PCR was evaluated: Genes involved in the DNA methylation (DNMT1, DNMT3A) and DNA demethylation process (TET3) and those involved in chromatin remodeling: genes involved in the modification of histone methylation (EHMT1, EHMT2) and genes involved in the modification of histone deacetylation (HDAC3, HDAC5). Gene profiling showed that glyphosate changed the expression of DNMT1, DMNT3A, and HDAC3, while AMPA changed the expression of DNMT1 and HDAC3. The results also revealed that glyphosate at lower concentrations than AMPA upregulated the expression of the tested genes. Both compounds studied altered expression of genes, which are characteristic for the regulation of transcriptionally inactive chromatin. However, the unknown activity of many other proteins involved in chromatin structure regulation prevents to carry out an unambiguous evaluation of the effect of tested xenobiotics on the studied process. Undoubtedly, we have observed that glyphosate and AMPA affect epigenetic processes that regulate chromatin architecture.
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Affiliation(s)
- Ewelina Woźniak
- Department of Biophysics of Environmental Pollution, Faculty of Biology and Environmental Protection, University of Lodz, Pomorska 141/143, 90-236 Lodz, Poland; (E.W.); (J.M.)
- Laboratory of Tissue Immunopharmacology, Department of Internal Diseases and Clinical Pharmacology, Medical University of Lodz, Kniaziewicza 1/5, 91-347 Lodz, Poland
| | - Edyta Reszka
- Department of Molecular Genetics and Epigenetics, Nofer Institute of Occupational Medicine, Teresy 8, 91-348 Lodz, Poland; (E.R.); (E.J.)
| | - Ewa Jabłońska
- Department of Molecular Genetics and Epigenetics, Nofer Institute of Occupational Medicine, Teresy 8, 91-348 Lodz, Poland; (E.R.); (E.J.)
| | - Jaromir Michałowicz
- Department of Biophysics of Environmental Pollution, Faculty of Biology and Environmental Protection, University of Lodz, Pomorska 141/143, 90-236 Lodz, Poland; (E.W.); (J.M.)
| | - Bogumiła Huras
- Łukasiewicz Research Network, Institute of Industrial Organic Chemistry, Annopol 6 Str, 03-236 Warsaw, Poland;
| | - Bożena Bukowska
- Department of Biophysics of Environmental Pollution, Faculty of Biology and Environmental Protection, University of Lodz, Pomorska 141/143, 90-236 Lodz, Poland; (E.W.); (J.M.)
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16
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Ratna MG, Nugrahaningsih DAA, Sholikhah EN, Dwianingsih EK, Malueka RG. The association between PON1 and GSTM1 genetic variation with methylation of p16 gene promoter among Javanese farmers exposed to pesticides at Magelang Regency, Central Java, Indonesia. Heliyon 2020; 6:e03993. [PMID: 32478190 PMCID: PMC7248662 DOI: 10.1016/j.heliyon.2020.e03993] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Revised: 12/11/2019] [Accepted: 05/12/2020] [Indexed: 12/08/2022] Open
Abstract
Occupational exposure to pesticides leads to the development of cancer. Aberrant DNA methylation plays a crucial role in cancer. The manifestation of the carcinogenic effect of pesticides could be determined by the variation of genes encoding enzyme, including PON1 Q192R and GSTM1. The goal of this study was to find out polymorphism of PON1 Q192R and methylation of p16 gene promoter, and their correlation on Javanese farmers in the agricultural area of Ngablak Subdistrict, Magelang Regency, Central Java. Seventy-eight pesticide-exposed farmers enrolled in the study. Polymorphism of PON Q192R was determined using PCR-RFLP and variation of GSTM1 was examined using conventional PCR. The methylation of the p16 gene promoter was determined using methylation-specific PCR. The result revealed 94.9% polymorphism of PON1 Q192R, which was higher in the R/R (Arg/Arg) genotypes than Q/R (Gln/Arg) and lowest in Q/Q (Gln/Gln) genotypes. We also found 82.1% GSTM1 null genotype among the farmers enrolled in the study. As many as 26.9% methylations of p16 gene promoter were found among farmers. Genetic variation of PON1 Q192R and GSTM1 were not found to be correlated to the methylation status of p16 gene promoter in the Javanese population.
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Affiliation(s)
- Maya G Ratna
- Master of Biomedical Science Program, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Dwi A A Nugrahaningsih
- Department of Pharmacology and Therapy, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia.,Genetics Working Group, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Indonesia
| | - Eti N Sholikhah
- Department of Pharmacology and Therapy, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Ery K Dwianingsih
- Department of Anatomical Pathology, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia.,Genetics Working Group, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Indonesia
| | - Rusdy G Malueka
- Department of Neurology, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia.,Genetics Working Group, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Indonesia
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17
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Zhou X, Wei W, Duan X, Zhang H, Feng X, Wang T, Wang P, Ding M, Liu S, Li L, Yao W, Wang Q, Acquaye RM, Liang H, Wang W, Yang Y. Effect of TRF1 rs3863242 polymorphism on telomere length in omethoate-exposed workers. JOURNAL OF ENVIRONMENTAL SCIENCE AND HEALTH. PART. B, PESTICIDES, FOOD CONTAMINANTS, AND AGRICULTURAL WASTES 2020; 55:525-529. [PMID: 32077369 DOI: 10.1080/03601234.2020.1728167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Telomere length was found to be associated with omethoate exposure and polymorphisms in certain genes among occupational workers. However, whether the polymorphisms in telomere-binding protein genes influence telomere length remains unclear. To explore the correlation between telomere length and polymorphisms in telomere-binding protein genes, telomere length in peripheral blood leukocytes was determined by real-time quantitative polymerase chain reaction in 180 omethoate-exposed workers and 115 healthy controls. Polymorphisms in 10 pairs of alleles were detected using flight mass spectrometry or polymerase chain reaction-restriction fragment length polymorphism technique. The results showed that individuals with GG genotype in TRF1 rs3863242 had longer telomere lengths than those with AG + AA genotype in the control group (p = 0.005). The multiple regression analysis suggested that both omethoate exposure (b = 0.526, p < 0.001) and TRF1 rs3863242 GG (b = 0.220, p = 0.002) were related to a longer telomere length. In conclusion, GG genotype in TRF1 rs3863242 is linked to prolongation of telomere length, and individuals with GG genotype are recommended to strengthen health protection in a Chinese occupational omethoate-exposed population.
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Affiliation(s)
- Xiaoshan Zhou
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Wan Wei
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Xiaoran Duan
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Hui Zhang
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Xiaolei Feng
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Tuanwei Wang
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Pengpeng Wang
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Mingcui Ding
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Suxiang Liu
- Clinical Department, Zhengzhou Institute of Occupational Health, Zhengzhou, Henan, China
| | - Lei Li
- Clinical Department, Zhengzhou Institute of Occupational Health, Zhengzhou, Henan, China
| | - Wu Yao
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Qi Wang
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Reuben Mensah Acquaye
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
| | - Haiyong Liang
- BioMiao Biological Technology Co., Ltd, Beijing, China
| | - Wei Wang
- Department of Occupational health and occupational diseases, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
- The Key Laboratory of Nanomedicine and Health Inspection of Zhengzhou, Zhengzhou, Henan, China
| | - Yongli Yang
- Department of Epidemiology and Biostatistics, College of Public Health, Zhengzhou University, Zhengzhou, Henan, China
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Duan X, Yang Y, Zhang D, Wang S, Feng X, Wang T, Wang P, Ding M, Zhang H, Liu B, Wei W, Yao W, Cui L, Zhou X, Wang W. Genetic polymorphisms, mRNA expression levels of telomere-binding proteins, and associates with telomere damage in PAHs-Exposure workers. CHEMOSPHERE 2019; 231:442-449. [PMID: 31146136 DOI: 10.1016/j.chemosphere.2019.05.134] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 05/13/2019] [Accepted: 05/16/2019] [Indexed: 06/09/2023]
Abstract
Coke oven emissions (COEs), confirmed human carcinogens, are mainly composed of polycyclic aromatic hydrocarbons (PAHs). Telomere shortening in blood leukocytes has been associated with COEs, and polymorphisms in metabolic enzymes. However, the relationship between polymorphisms in telomere related genes and telomere shortening in COEs exposed workers has never been evaluated. Therefore, we measured telomere length and mRNA expression levels of telomere-binding proteins (TBPs) by qPCR method in leucocyte from 544 COEs exposed workers and 238 office staffs (referents). Flight mass spectrometry was used to perform the genotyping of selected functional and susceptible SNPs. The results showed that the telomere length in the exposure group 0.75(0.51,1.08) was significantly shorter than that in the control group 1.05(0.76,1.44) (P < 0.001). The mRNA expression levels of TPP1, TERF1 and TERF2 genes in the exposure group were significantly lower than those in the control group (P < 0.05), the mRNA expression level of POT1 in the exposure group was significantly higher than that in the control group (P < 0.05). We used the wild homozygous genotype as a reference, subjects carrying TERT rs2736109 AA, TERT rs3215401 CC and TERT rs2736100 GT + GG genotypes had significantly longer telomere length in the exposure group (P < 0.05). In conclusion, the workers exposed to COEs had shorter telomere length, which was regulated by the TPP1, TERF1, TERF2 and POT1 genes expression levels, and the gene polymorphisms of TERT gene were associated with the telomere length among PAHs-exposure workers.
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Affiliation(s)
- Xiaoran Duan
- Biotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou University, Zhengzhou 450052, Henan, China; Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Yongli Yang
- Department of Epidemiology and Biostatistics, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Daping Zhang
- Department of Cardiology, Huaihe Hospital of Henan University, Kaifeng, 475000, Henan, China
| | - Sihua Wang
- Department of Occupational Health, Henan Institute for Occupational Medicine, Zhengzhou, 450052, Henan, China
| | - Xiaolei Feng
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Tuanwei Wang
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Pengpeng Wang
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Mingcui Ding
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Hui Zhang
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Bin Liu
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Wan Wei
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Wu Yao
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Liuxin Cui
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Xiaoshan Zhou
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China
| | - Wei Wang
- Department of Occupational and Environmental Health, College of Public Health, Zhengzhou University, Zhengzhou, 450001, Henan, China.
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19
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Ferrari L, Pavanello S, Bollati V. Molecular and epigenetic markers as promising tools to quantify the effect of occupational exposures and the risk of developing non-communicable diseases. LA MEDICINA DEL LAVORO 2019; 110:168-190. [PMID: 31268425 PMCID: PMC7812541 DOI: 10.23749/mdl.v110i3.8538] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Accepted: 06/06/2019] [Indexed: 12/18/2022]
Abstract
Non-communicable diseases (NCDs) are chronic diseases that are by far the leading cause of death in the world. Many occupational hazards, together with social, economic and demographic factors, have been associated to NCDs development. Genetic susceptibility or environmental exposures alone are not usually sufficient to explain the pathogenesis of NCDs, but can be integrated in a more complex scenario that can result in pathological phenotypes. Epigenetics is a crucial component of this scenario, as its changes are related to specific exposures, therefore potentially able to display the effects of environment on the genome, filling the gap between genetic asset and environment in explaining disease development. To date, the most promising biomarkers have been assessed in occupational cohorts as well as in case/control studies and include DNA methylation, histone modifications, microRNA expression, extracellular vesicles, telomere length, and mitochondrial alterations.
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Affiliation(s)
- Luca Ferrari
- EPIGET - Epidemiology, Epigenetics and Toxicology Lab, Department of Clinical Sciences and Community Health, Università degli Studi di Milano, via San Barnaba 8, 20122 Milan, Italy..
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Costa C, Miozzi E, Teodoro M, Fenga C. Influence of genetic polymorphism on pesticide-induced oxidative stress. CURRENT OPINION IN TOXICOLOGY 2019. [DOI: 10.1016/j.cotox.2018.12.008] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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21
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Epigenetic Alterations: The Relation Between Occupational Exposure and Biological Effects in Humans. RNA TECHNOLOGIES 2019. [DOI: 10.1007/978-3-030-14792-1_11] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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