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Dos Santos AT, Souza JPA, Jorge IR, Andrade SMM, Rosa BB, Moura MO, Zarbin PHG. Can Pheromones Contribute to Phylogenetic Hypotheses? A Case Study of Chrysomelidae. J Chem Ecol 2023; 49:611-641. [PMID: 37856061 DOI: 10.1007/s10886-023-01450-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 08/15/2023] [Accepted: 08/21/2023] [Indexed: 10/20/2023]
Abstract
Pheromones mediate species-level communication in the search for mates, nesting, and feeding sites. Although the role of pheromones has long been discussed by various authors, their existence was not proven until the mid-twentieth century when the first sex pheromone was identified. From this finding, much has been speculated about whether this communication mechanism has acted as a regulatory agent in the process of speciation, competition, and sexual selection since it acts as an intraspecific barrier. Chrysomelidae is one of the major Phytophaga lineages, with approximately 40,000 species. Due to this immense diversity the internal relationships remain unstable when analyzed only with morphological data, consequently recent efforts have been directed to molecular analyses to establish clarity for the relationships and found their respective monophyly. Therefore, our goals are twofold 1) to synthesize the current literature on Chrysomelidae sex pheromones and 2) to test whether Chrysomelidae sex pheromones and their chemical structures could be used in phylogenetic analysis for the group. The results show that, although this is the first analysis in Chrysomelidae to use pheromones as a phylogenetic character, much can be observed in agreement with previous analyses, thus confirming that pheromones, when known in their entirety within lineages, can be used as characters in phylogenetic analyses, bringing elucidation to the relationships and evolution of organisms.
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Affiliation(s)
- Aluska T Dos Santos
- Setor de Ciências Exatas, Departamento de Química, Universidade Federal do Paraná, Curitiba, Paraná, CEP 81531-980, Brazil
- Setor de Ciências Biológicas, Departamento de Zoologia, Universidade Federal do Paraná, Curitiba, Paraná, CEP 81531-980, Brazil
| | - João P A Souza
- Setor de Ciências Exatas, Departamento de Química, Universidade Federal do Paraná, Curitiba, Paraná, CEP 81531-980, Brazil
| | - Isaac R Jorge
- Setor de Ciências Biológicas, Departamento de Zoologia, Universidade Federal do Paraná, Curitiba, Paraná, CEP 81531-980, Brazil
| | - Samara M M Andrade
- Natural Resources Canada - Great Lakes Forestry Centre, Sault Ste Marie, Ontario, P6A 2E5, Canada
- Graduate Department of Forestry, John H. Daniels Faculty of Architecture, Landscape and Design, University of Toronto, Toronto, Ontario, M5S 3B3, Canada
| | - Brunno B Rosa
- Departamento de Biologia, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, São Paulo, 14040-901, Brazil
- Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Center for Integrative Biodiversity Discovery, Invalidenstraße 43, 10115, Berlin, Germany
| | - Maurício O Moura
- Setor de Ciências Biológicas, Departamento de Zoologia, Universidade Federal do Paraná, Curitiba, Paraná, CEP 81531-980, Brazil
| | - Paulo H G Zarbin
- Setor de Ciências Exatas, Departamento de Química, Universidade Federal do Paraná, Curitiba, Paraná, CEP 81531-980, Brazil.
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An Y, Braga MP, Garcia SL, Grudzinska-Sterno M, Hambäck PA. Host Phylogeny Structures the Gut Bacterial Community Within Galerucella Leaf Beetles. MICROBIAL ECOLOGY 2023; 86:2477-2487. [PMID: 37314477 PMCID: PMC10640405 DOI: 10.1007/s00248-023-02251-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 05/27/2023] [Indexed: 06/15/2023]
Abstract
Gut microbes play important roles for their hosts. Previous studies suggest that host-microbial systems can form long-term associations over evolutionary time and the dynamic changes of the intestinal system may represent major driving forces and contribute to insect dietary diversification and speciation. Our study system includes a set of six closely related leaf beetle species (Galerucella spp.) and our study aims to separate the roles of host phylogeny and ecology in determining the gut microbial community and to identify eventual relationship between host insects and gut bacteria. We collected adult beetles from their respective host plants and quantified their microbial community using 16S rRNA sequencing. The results showed that the gut bacteria community composition was structured by host beetle phylogeny, where more or less host-specific gut bacteria interact with the different Galerucella species. For example, the endosymbiotic bacteria Wolbachia was found almost exclusively in G. nymphaea and G. sagittariae. Diversity indicators also suggested that α- and β-diversities of gut bacteria communities varied among host beetle species. Overall, our results suggest a phylogenetically controlled co-occurrence pattern between the six closely related Galerucella beetles and their gut bacteria, indicating the potential of co-evolutionary processes occurring between hosts and their gut bacterial communities.
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Affiliation(s)
- Yueqing An
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden.
| | - Mariana P Braga
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
- Helsinki Life Science Institute, University of Helsinki, Helsinki, Finland
| | - Sarahi L Garcia
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
- Science for Life Laboratory, Stockholm, Sweden
| | | | - Peter A Hambäck
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
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Yang X, Slotte T, Dainat J, Hambäck PA. Genome assemblies of three closely related leaf beetle species (Galerucella spp.). G3 (BETHESDA, MD.) 2021; 11:6307723. [PMID: 34849825 PMCID: PMC8496278 DOI: 10.1093/g3journal/jkab214] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Accepted: 06/11/2021] [Indexed: 06/13/2023]
Abstract
Galerucella (Coleoptera: Chrysomelidae) is a leaf beetle genus that has been extensively used for ecological and evolutionary studies. It has also been used as biological control agent against invading purple loosestrife in North America, with large effects on biodiversity. Here, we report genome assembly and annotation of three closely related Galerucella species: G. calmariensis, G. pusilla, and G. tenella. The three assemblies have a genome size ranging from 460 to 588 Mbp, with N50 from 31,588 to 79,674 kbp, containing 29,202 to 40,929 scaffolds. Using an ab initio evidence-driven approach, 30,302 to 33,794 protein-coding genes were identified and functionally annotated. These draft genomes will contribute to the understanding of host-parasitoid interactions, evolutionary comparisons of leaf beetle species and future population genomics studies.
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Affiliation(s)
- Xuyue Yang
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm 10691, Sweden
| | - Tanja Slotte
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm 10691, Sweden
| | - Jacques Dainat
- Department of Medical Biochemistry Microbiology and Genomics, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Uppsala 75237, Sweden
| | - Peter A Hambäck
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm 10691, Sweden
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Lehikoinen A, Pohjola P, Valkama J, Mutanen M, Pohjoismäki JLO. Promiscuous specialists: Host specificity patterns among generalist louse flies. PLoS One 2021; 16:e0247698. [PMID: 34043636 PMCID: PMC8158981 DOI: 10.1371/journal.pone.0247698] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Accepted: 05/17/2021] [Indexed: 11/18/2022] Open
Abstract
Ectoparasites such as louse flies (Diptera: Hippoboscidae) have tendency for host specialization, which is driven by adaptation to host biology as well as competition avoidance between parasites of the same host. However, some louse fly species, especially in genera attacking birds, show wide range of suitable hosts. In the presented study, we have surveyed the current status of bird specific louse flies in Finland to provide comprehensive host association data to analyse the ecological requirements of the generalist species. A thorough sampling of 9342 birds, representing 134 species, recovered 576 specimens of louse flies, belonging to six species: Crataerina hirundinis, C. pallida, Ornithomya avicularia, O. chloropus, O. fringillina and Ornithophila metallica. Despite some overlapping hosts, the three Ornithomya species showed a notable pattern in their host preference, which was influenced not only by the host size but also by the habitat and host breeding strategy. We also provide DNA barcodes for ten Finnish species of Hippoboscidae, which can be used as a resource for species identification as well as metabarcoding studies in the future.
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Affiliation(s)
- Aleksi Lehikoinen
- The Helsinki Lab of Ornithology, Finnish Museum of Natural History, Helsinki University, Helsinki, Finland
| | - Pekka Pohjola
- Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland
| | - Jari Valkama
- The Helsinki Lab of Ornithology, Finnish Museum of Natural History, Helsinki University, Helsinki, Finland
| | - Marko Mutanen
- Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland
| | - Jaakko L O Pohjoismäki
- Department of Environmental and Biological Sciences, University of Eastern Finland, Joensuu, Finland
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Martinsson S, Klinth M, Erséus C. Testing species hypotheses for Fridericia magna, an enchytraeid worm (Annelida: Clitellata) with great mitochondrial variation. BMC Evol Biol 2020; 20:116. [PMID: 32928097 PMCID: PMC7488859 DOI: 10.1186/s12862-020-01678-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2019] [Accepted: 08/20/2020] [Indexed: 12/17/2022] Open
Abstract
BACKGROUND Deep mitochondrial divergences were observed in Scandinavian populations of the terrestrial to semi-aquatic annelid Fridericia magna (Clitellata: Enchytraeidae). This raised the need for testing whether the taxon is a single species or a complex of cryptic species. RESULTS A total of 62 specimens from 38 localities were included in the study, 44 of which were used for species delimitation. First, the 44 specimens were divided into clusters using ABGD (Automatic Barcode Gap Discovery) on two datasets, consisting of sequences of the mitochondrial markers COI and 16S. For each dataset, the worms were divided into six not completely congruent clusters. When they were combined, a maximum of seven clusters, or species hypotheses, were obtained, and the seven clusters were used as input in downstream analyses. We tested these hypotheses by constructing haplowebs for two nuclear markers, H3 and ITS, and in both haplowebs the specimens appeared as a single species. Multi-locus species delimitation analyses performed with the Bayesian BPP program also mainly supported a single species. Furthermore, no apparent morphological differences were found between the clusters. Two of the clusters were partially separated from each other and the other clusters, but not strongly enough to consider them as separate species. All 62 specimens were used to visualise the Scandinavian distribution, of the species, and to compare with published COI data from other Fridericia species. CONCLUSION We show that the morphospecies Fridericia magna is a single species, harbouring several distinct mitochondrial clusters. There is partial genetic separation between some of them, which may be interpreted as incipient speciation. The study shows the importance of rigorous species delimitation using several independent markers when deep mitochondrial divergences might give the false impression of cryptic speciation.
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Affiliation(s)
- Svante Martinsson
- Systematics and Biodiversity, Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden.
| | - Mårten Klinth
- Systematics and Biodiversity, Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden
| | - Christer Erséus
- Systematics and Biodiversity, Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden
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Košuthová A, Bergsten J, Westberg M, Wedin M. Species delimitation in the cyanolichen genus Rostania. BMC Evol Biol 2020; 20:115. [PMID: 32912146 PMCID: PMC7488055 DOI: 10.1186/s12862-020-01681-w] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Accepted: 08/31/2020] [Indexed: 11/24/2022] Open
Abstract
Background In this study, we investigate species limits in the cyanobacterial lichen genus Rostania (Collemataceae, Peltigerales, Lecanoromycetes). Four molecular markers (mtSSU rDNA, β-tubulin, MCM7, RPB2) were sequenced and analysed with two coalescent-based species delimitation methods: the Generalized Mixed Yule Coalescent model (GMYC) and a Bayesian species delimitation method (BPP) using a multispecies coalescence model (MSC), the latter with or without an a priori defined guide tree. Results Species delimitation analyses indicate the presence of eight strongly supported candidate species. Conclusive correlation between morphological/ecological characters and genetic delimitation could be found for six of these. Of the two additional candidate species, one is represented by a single sterile specimen and the other currently lacks morphological or ecological supporting evidence. Conclusions We conclude that Rostania includes a minimum of six species: R. ceranisca, R. multipunctata, R. occultata 1, R. occultata 2, R. occultata 3, and R. occultata 4,5,6. Three distinct Nostoc morphotypes occur in Rostania, and there is substantial correlation between these morphotypes and Rostania thallus morphology.
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Affiliation(s)
- Alica Košuthová
- Department of Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05, Stockholm, Sweden.
| | - Johannes Bergsten
- Department of Zoology, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05, Stockholm, Sweden
| | - Martin Westberg
- Museum of Evolution, Uppsala University, Norbyvägen 16, SE-752 36, Uppsala, Sweden
| | - Mats Wedin
- Department of Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05, Stockholm, Sweden
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Yang X, Fors L, Slotte T, Theopold U, Binzer-Panchal M, Wheat CW, Hambäck PA. Differential Expression of Immune Genes between Two Closely Related Beetle Species with Different Immunocompetence following Attack by Asecodes parviclava. Genome Biol Evol 2020; 12:522-534. [PMID: 32282901 PMCID: PMC7211424 DOI: 10.1093/gbe/evaa075] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/07/2020] [Indexed: 12/28/2022] Open
Abstract
Endoparasitoid wasps are important natural enemies of many insect species and are major selective forces on the host immune system. Despite increased interest in insect antiparasitoid immunity, there is sparse information on the evolutionary dynamics of biological pathways and gene regulation involved in host immune defense outside Drosophila species. We de novo assembled transcriptomes from two beetle species and used time-course differential expression analysis to investigate gene expression differences in closely related species Galerucella pusilla and G. calmariensis that are, respectively, resistant and susceptible against parasitoid infection by Asecodes parviclava parasitoids. Approximately 271 million and 224 million paired-ended reads were assembled and filtered to form 52,563 and 59,781 transcripts for G. pusilla and G. calmariensis, respectively. In the whole-transcriptome level, an enrichment of functional categories related to energy production, biosynthetic process, and metabolic process was exhibited in both species. The main difference between species appears to be immune response and wound healing process mounted by G. pusilla larvae. Using reciprocal BLAST against the Drosophila melanogaster proteome, 120 and 121 immune-related genes were identified in G. pusilla and G. calmariensis, respectively. More immune genes were differentially expressed in G. pusilla than in G. calmariensis, in particular genes involved in signaling, hematopoiesis, and melanization. In contrast, only one gene was differentially expressed in G. calmariensis. Our study characterizes important genes and pathways involved in different immune functions after parasitoid infection and supports the role of signaling and hematopoiesis genes as key players in host immunity in Galerucella against parasitoid wasps.
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Affiliation(s)
- Xuyue Yang
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Sweden
| | - Lisa Fors
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Sweden
| | - Tanja Slotte
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Sweden
| | - Ulrich Theopold
- Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Sweden
| | - Mahesh Binzer-Panchal
- Department of Medical Biochemistry and Microbiology, National Bioinformatics Infrastructure Sweden (NBIS), Science for Life Laboratory, Uppsala University, Sweden
| | | | - Peter A Hambäck
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Sweden
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Egan PA, Adler LS, Irwin RE, Farrell IW, Palmer-Young EC, Stevenson PC. Crop Domestication Alters Floral Reward Chemistry With Potential Consequences for Pollinator Health. FRONTIERS IN PLANT SCIENCE 2018; 9:1357. [PMID: 30319666 PMCID: PMC6169423 DOI: 10.3389/fpls.2018.01357] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Accepted: 08/28/2018] [Indexed: 05/29/2023]
Abstract
Crop domestication can lead to weakened expression of plant defences, with repercussions for herbivore and pathogen susceptibility. However, little is known about how domestication alters traits that mediate other important ecological interactions in crops, such as pollination. Secondary metabolites, which underpin many defence responses in plants, also occur widely in nectar and pollen and influence plant-pollinator interactions. Thus, domestication may also affect secondary compounds in floral rewards, with potential consequences for pollinators. To test this hypothesis, we chemically analysed nectar and pollen from wild and cultivated plants of highbush blueberry (Vaccinium corymbosum L.), before conducting an artificial diet bioassay to examine pollinator-pathogen interactions. Our results indicated that domestication has significantly altered the chemical composition of V. corymbosum nectar and pollen, and reduced pollen chemical diversity in cultivated plants. Of 20 plant metabolites identified in floral rewards, 13 differed significantly between wild and cultivated plants, with a majority showing positive associations with wild compared to cultivated plants. These included the amino acid phenylalanine (4.5 times higher in wild nectar, 11 times higher in wild pollen), a known bee phagostimulant and essential nutrient; and the antimicrobial caffeic acid ester 4-O-caffeoylshikimic acid (two times higher in wild nectar). We assessed the possible biological relevance of variation in caffeic acid esters in bioassays, using the commercially available 3-O-caffeoylquinic acid. This compound reduced Bombus impatiens infection by a prominent gut pathogen (Crithidia) at concentrations that occurred in wild but not cultivated plants, suggesting that domestication may influence floral traits with consequences for bee health. Appreciable levels of genetic variation and heritability were found for most floral reward chemical traits, indicating good potential for selective breeding. Our study provides the first assessment of plant domestication effects on floral reward chemistry and its potential repercussions for pollinator health. Given the central importance of pollinators for agriculture, we discuss the need to extend such investigations to pollinator-dependent crops more generally and elaborate on future research directions to ascertain wider trends, consequences for pollinators, mechanisms, and breeding solutions.
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Affiliation(s)
- Paul A. Egan
- Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Alnarp, Sweden
| | - Lynn S. Adler
- Department of Biology, University of Massachusetts Amherst, Amherst, MA, United States
| | - Rebecca E. Irwin
- Department of Applied Ecology, North Carolina State University, Raleigh, NC, United States
| | | | - Evan C. Palmer-Young
- Department of Biology, University of Massachusetts Amherst, Amherst, MA, United States
| | - Philip C. Stevenson
- Royal Botanic Gardens, Kew, Richmond, United Kingdom
- Natural Resources Institute, University of Greenwich, London, United Kingdom
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Fors L, Mozuraitis R, Blažytė-Čereškienė L, Verschut TA, Hambäck PA. Selection by parasitoid females among closely related hosts based on volatiles: Identifying relevant chemical cues. Ecol Evol 2018; 8:3219-3228. [PMID: 29607019 PMCID: PMC5869356 DOI: 10.1002/ece3.3877] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Revised: 01/02/2018] [Accepted: 01/07/2018] [Indexed: 11/09/2022] Open
Abstract
Parasitoid fitness is influenced by the ability to overcome host defense strategies and by the ability of parasitoid females to select high-quality host individuals. When females are unable to differentiate among hosts, their fitness will decrease with an increasing abundance of resistant hosts. To understand the effect of mixed host populations on female fitness, it is therefore necessary to investigate the ability of female parasitoids to select among hosts. Here, we used behavioral assays, headspace volatile collection, and electrophysiology to study the ability of Asecodes parviclava to use olfactory cues to select between a susceptible host (Galerucella calmariensis) and a resistant host (Galerucella pusilla) from a distance. Our studies show that parasitoid females have the capacity to distinguish the two hosts and that the selection behavior is acquired through experiences during earlier life stages. Further, we identified two volatiles (α-terpinolene and [E]-β-ocimene) which amounts differ between the two plant-herbivore systems and that caused behavioral and electrophysiological responses. The consequence of this selection behavior is that females have the capacity to avoid laying eggs in G. pusilla, where the egg mortality is higher due to much stronger immune responses toward A. parviclava than in larvae of G. calmariensis.
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Affiliation(s)
- Lisa Fors
- Department of Ecology Environment and Plant Sciences Stockholm University Stockholm Sweden.,Present address: Department of Zoology Stockholm University Stockholm Sweden
| | - Raimondas Mozuraitis
- Department of Ecology Environment and Plant Sciences Stockholm University Stockholm Sweden.,Laboratory of Chemical and Behavioural Ecology Institute of Ecology Nature Research Centre Vilnius Lithuania.,Present address: Department of Zoology Stockholm University Stockholm Sweden
| | - Laima Blažytė-Čereškienė
- Laboratory of Chemical and Behavioural Ecology Institute of Ecology Nature Research Centre Vilnius Lithuania
| | - Thomas A Verschut
- Department of Ecology Environment and Plant Sciences Stockholm University Stockholm Sweden
| | - Peter A Hambäck
- Department of Ecology Environment and Plant Sciences Stockholm University Stockholm Sweden
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Martinsson S, Erséus C. Cryptic diversity in supposedly species-poor genera of Enchytraeidae (Annelida: Clitellata). Zool J Linn Soc 2017. [DOI: 10.1093/zoolinnean/zlx084] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Svante Martinsson
- Systematics and Biodiversity, Department of Biological and Environmental Sciences, University of Gothenburg, Sweden
| | - Christer Erséus
- Systematics and Biodiversity, Department of Biological and Environmental Sciences, University of Gothenburg, Sweden
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11
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Abstract
The multispecies coalescent model underlies many approaches used for species delimitation. In previous work assessing the performance of species delimitation under this model, speciation was treated as an instantaneous event rather than as an extended process involving distinct phases of speciation initiation (structuring) and completion. Here, we use data under simulations that explicitly model speciation as an extended process rather than an instantaneous event and carry out species delimitation inference on these data under the multispecies coalescent. We show that the multispecies coalescent diagnoses genetic structure, not species, and that it does not statistically distinguish structure associated with population isolation vs. species boundaries. Because of the misidentification of population structure as putative species, our work raises questions about the practice of genome-based species discovery, with cascading consequences in other fields. Specifically, all fields that rely on species as units of analysis, from conservation biology to studies of macroevolutionary dynamics, will be impacted by inflated estimates of the number of species, especially as genomic resources provide unprecedented power for detecting increasingly finer-scaled genetic structure under the multispecies coalescent. As such, our work also represents a general call for systematic study to reconsider a reliance on genomic data alone. Until new methods are developed that can discriminate between structure due to population-level processes and that due to species boundaries, genomic-based results should only be considered a hypothesis that requires validation of delimited species with multiple data types, such as phenotypic and ecological information.
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Affiliation(s)
- Jeet Sukumaran
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor MI 48109-1079
| | - L Lacey Knowles
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor MI 48109-1079
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12
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Fors L, Markus R, Theopold U, Ericson L, Hambäck PA. Geographic variation and trade-offs in parasitoid virulence. J Anim Ecol 2016; 85:1595-1604. [PMID: 27476800 DOI: 10.1111/1365-2656.12579] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2016] [Accepted: 07/21/2016] [Indexed: 01/01/2023]
Abstract
Host-parasitoid systems are characterized by a continuous development of new defence strategies in hosts and counter-defence mechanisms in parasitoids. This co-evolutionary arms race makes host-parasitoid systems excellent for understanding trade-offs in host use caused by evolutionary changes in host immune responses and parasitoid virulence. However, knowledge obtained from natural host-parasitoid systems on such trade-offs is still limited. In this study, the aim was to examine trade-offs in parasitoid virulence in Asecodes parviclava (Hymenoptera: Eulophidae) when attacking three closely related beetles: Galerucella pusilla, Galerucella calmariensis and Galerucella tenella (Coleoptera: Chrysomelidae). A second aim was to examine whether geographic variation in parasitoid infectivity or host immune response could explain differences in parasitism rate between northern and southern sites. More specifically, we wanted to examine whether the capacity to infect host larvae differed depending on the previous host species of the parasitoids and if such differences were connected to differences in the induction of host immune systems. This was achieved by combining controlled parasitism experiments with cytological studies of infected larvae. Our results reveal that parasitism success in A. parviclava differs both depending on previous and current host species, with a higher virulence when attacking larvae of the same species as the previous host. Virulence was in general high for parasitoids from G. pusilla and low for parasitoids from G. calmariensis. At the same time, G. pusilla larvae had the strongest immune response and G. calmariensis the weakest. These observations were linked to changes in the larval hemocyte composition, showing changes in cell types important for the encapsulation process in individuals infected by more or less virulent parasitoids. These findings suggest ongoing evolution in parasitoid virulence and host immune response, making the system a strong candidate for further studies on host race formation and speciation.
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Affiliation(s)
- Lisa Fors
- Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm, Sweden.
| | - Robert Markus
- School of Life Sciences, University of Nottingham, Nottingham, NG7 2RD, UK
| | - Ulrich Theopold
- Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, 10691, Stockholm, Sweden
| | - Lars Ericson
- Department of Ecology and Environmental Science, Umeå University, 90187, Umeå, Sweden
| | - Peter A Hambäck
- Department of Ecology, Environment and Plant Sciences, Stockholm University, 10691, Stockholm, Sweden
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Fujisawa T, Aswad A, Barraclough TG. A Rapid and Scalable Method for Multilocus Species Delimitation Using Bayesian Model Comparison and Rooted Triplets. Syst Biol 2016; 65:759-71. [PMID: 27055648 PMCID: PMC4997007 DOI: 10.1093/sysbio/syw028] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2015] [Accepted: 03/30/2016] [Indexed: 12/22/2022] Open
Abstract
Multilocus sequence data provide far greater power to resolve species limits than the single locus data typically used for broad surveys of clades. However, current statistical methods based on a multispecies coalescent framework are computationally demanding, because of the number of possible delimitations that must be compared and time-consuming likelihood calculations. New methods are therefore needed to open up the power of multilocus approaches to larger systematic surveys. Here, we present a rapid and scalable method that introduces 2 new innovations. First, the method reduces the complexity of likelihood calculations by decomposing the tree into rooted triplets. The distribution of topologies for a triplet across multiple loci has a uniform trinomial distribution when the 3 individuals belong to the same species, but a skewed distribution if they belong to separate species with a form that is specified by the multispecies coalescent. A Bayesian model comparison framework was developed and the best delimitation found by comparing the product of posterior probabilities of all triplets. The second innovation is a new dynamic programming algorithm for finding the optimum delimitation from all those compatible with a guide tree by successively analyzing subtrees defined by each node. This algorithm removes the need for heuristic searches used by current methods, and guarantees that the best solution is found and potentially could be used in other systematic applications. We assessed the performance of the method with simulated, published, and newly generated data. Analyses of simulated data demonstrate that the combined method has favorable statistical properties and scalability with increasing sample sizes. Analyses of empirical data from both eukaryotes and prokaryotes demonstrate its potential for delimiting species in real cases.
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Affiliation(s)
| | - Amr Aswad
- Department of Life Sciences, Imperial College London, Silwood Park Campus, Ascot, Berkshire SL5 7PY, UK
| | - Timothy G Barraclough
- Department of Life Sciences, Imperial College London, Silwood Park Campus, Ascot, Berkshire SL5 7PY, UK
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Tsai CL, Yeh WB. Subspecific Differentiation Events of Montane Stag Beetles (Coleoptera, Lucanidae) Endemic to Formosa Island. PLoS One 2016; 11:e0156600. [PMID: 27257861 PMCID: PMC4892689 DOI: 10.1371/journal.pone.0156600] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2015] [Accepted: 05/17/2016] [Indexed: 11/18/2022] Open
Abstract
Taxonomic debates have been carrying on for decades over Formosan stag beetles, which consist of a high proportion of endemic species and subspecies featuring morphological variations associated with local adaptation. With the influence of periodical Pleistocene glaciations and the presence of several mountain ranges, the genetic differentiation and taxonomic recognition, within this medium-size island, of two endemic subspecies for each of four montane stag beetles, i.e. Lucanus ogakii, L. kanoi, Prismognathus davidis, and Neolucanus doro, has been an appealing issue. Based on monophyletic lineages and population structure, possible divergent scenarios have been proposed to clarify the subspecific status for each of the above mentioned stag beetles. Phylogenetic inferences based on COI+16S rDNA+28S rDNA of 240 Formosan lucanids have confirmed most species are monophyletic groups; and the intraspecific (<2%) and interspecific (>2%) genetic distances of the two mitochondrial genes could be applied concordantly for taxonomic identification. On account of Bayesian-based species delimitation, geographic distribution, population structure, and sequence divergences, the subspecific status for L. ogakii, L. kanoi, and Pri. davidis are congruent with their geographic distribution in this island; and the calibration time based on the mitochondrial genes shows the subspecific split events occurred 0.7–1 million years ago. In addition, a more complicated scenario, i.e. genetic differentiation including introgression/hybridization events, might have occurred among L. ogakii, L. kanoi, and L. maculifemoratus. The geological effects of mountain hindrance accompanied by periodical glaciations could have been vital in leading to the geographical subspecific differentiation of these montane stag beetles.
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Affiliation(s)
- Cheng-Lung Tsai
- Department of Entomology, National Chung Hsing University, Taichung, Taiwan
| | - Wen-Bin Yeh
- Department of Entomology, National Chung Hsing University, Taichung, Taiwan
- * E-mail:
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Fossen EI, Ekrem T, Nilsson AN, Bergsten J. Species delimitation in northern European water scavenger beetles of the genus Hydrobius (Coleoptera, Hydrophilidae). Zookeys 2016; 564:71-120. [PMID: 27081333 PMCID: PMC4820092 DOI: 10.3897/zookeys.564.6558] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2015] [Accepted: 12/23/2015] [Indexed: 12/18/2022] Open
Abstract
The chiefly Holarctic Hydrobius species complex (Coleoptera, Hydrophilidae) currently consists of Hydrobius arcticus Kuwert, 1890, and three morphological variants of Hydrobius fuscipes (Linnaeus, 1758): var. fuscipes, var. rottenbergii and var. subrotundus in northern Europe. Here molecular and morphological data are used to test the species boundaries in this species complex. Three gene segments (COI, H3 and ITS2) were sequenced and analyzed with Bayesian methods to infer phylogenetic relationships. The Generalized Mixed Yule Coalescent (GMYC) model and two versions of the Bayesian species delimitation method BPP, with or without an a priori defined guide tree (v2.2 & v3.0), were used to evaluate species limits. External and male genital characters of primarily Fennoscandian specimens were measured and statistically analyzed to test for significant differences in quantitative morphological characters. The four morphotypes formed separate genetic clusters on gene trees and were delimited as separate species by GMYC and by both versions of BPP, despite specimens of Hydrobius fuscipes var. fuscipes and Hydrobius fuscipes var. subrotundus being sympatric. Hydrobius arcticus and Hydrobius fuscipes var. rottenbergii could only be separated genetically with ITS2, and were delimited statistically with GMYC on ITS2 and with BPP on the combined data. In addition, six or seven potentially cryptic species of the Hydrobius fuscipes complex from regions outside northern Europe were delimited genetically. Although some overlap was found, the mean values of six male genital characters were significantly different between the morphotypes (p < 0.001). Morphological characters previously presumed to be diagnostic were less reliable to separate Hydrobius fuscipes var. fuscipes from Hydrobius fuscipes var. subrotundus, but characters in the literature for Hydrobius arcticus and Hydrobius fuscipes var. rottenbergii were diagnostic. Overall, morphological and molecular evidence strongly suggest that Hydrobius arcticus and the three morphological variants of Hydrobius fuscipes are separate species and Hydrobius rottenbergii Gerhardt, 1872, stat. n. and Hydrobius subrotundus Stephens, 1829, stat. n. are elevated to valid species. An identification key to northern European species of Hydrobius is provided.
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Affiliation(s)
- Erlend I. Fossen
- Department of Biology, Centre for Biodiversity Dynamics, NTNU Norwegian University of Science and Technology, 7491 Trondheim, Norway
- Department of Natural History, NTNU University Museum, 7491 Trondheim, Norway
| | - Torbjørn Ekrem
- Department of Natural History, NTNU University Museum, 7491 Trondheim, Norway
| | - Anders N. Nilsson
- Department of Ecology and Environmental Science, University of Umeå, S-901 87 Umeå, Sweden
| | - Johannes Bergsten
- Department of Zoology, Swedish Museum of Natural History, Box 50007, SE-10405 Stockholm, Sweden
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Nyman T, Leppänen SA, Várkonyi G, Shaw MR, Koivisto R, Barstad TE, Vikberg V, Roininen H. Determinants of parasitoid communities of willow-galling sawflies: habitat overrides physiology, host plant and space. Mol Ecol 2015; 24:5059-74. [DOI: 10.1111/mec.13369] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2014] [Revised: 08/30/2015] [Accepted: 09/01/2015] [Indexed: 11/28/2022]
Affiliation(s)
- Tommi Nyman
- Department of Biology; University of Eastern Finland; P.O. Box 111 Joensuu FI-80101 Finland
- Institute for Systematic Botany; University of Zurich; Zollikerstrasse 107 Zurich CH-8008 Switzerland
| | - Sanna A. Leppänen
- Department of Biology; University of Eastern Finland; P.O. Box 111 Joensuu FI-80101 Finland
| | - Gergely Várkonyi
- Finnish Environment Institute; Friendship Park Research Centre; Lentiirantie 342 B Kuhmo FI-88900 Finland
| | - Mark R. Shaw
- National Museums of Scotland; Chambers Street Edinburgh EH1 1JF UK
| | - Reijo Koivisto
- Department of Biology; University of Eastern Finland; P.O. Box 111 Joensuu FI-80101 Finland
| | | | - Veli Vikberg
- Liinalammintie 11 as. 6; Turenki FI-14200 Finland
| | - Heikki Roininen
- Department of Biology; University of Eastern Finland; P.O. Box 111 Joensuu FI-80101 Finland
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Kaiser L, Le Ru BP, Kaoula F, Paillusson C, Capdevielle-Dulac C, Obonyo JO, Herniou EA, Jancek S, Branca A, Calatayud PA, Silvain JF, Dupas S. Ongoing ecological speciation in Cotesia sesamiae, a biological control agent of cereal stem borers. Evol Appl 2015; 8:807-20. [PMID: 26366198 PMCID: PMC4561570 DOI: 10.1111/eva.12260] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2014] [Accepted: 03/09/2015] [Indexed: 01/18/2023] Open
Abstract
To develop efficient and safe biological control, we need to reliably identify natural enemy species, determine their host range, and understand the mechanisms that drive host range evolution. We investigated these points in Cotesia sesamiae, an African parasitic wasp of cereal stem borers. Phylogenetic analyses of 74 individual wasps, based on six mitochondrial and nuclear genes, revealed three lineages. We then investigated the ecological status (host plant and host insect ranges in the field, and host insect suitability tests) and the biological status (cross-mating tests) of the three lineages. We found that one highly supported lineage showed all the hallmarks of a cryptic species. It is associated with one host insect, Sesamia nonagrioides, and is reproductively isolated from the other two lineages by pre- and postmating barriers. The other two lineages had a more variable phylogenetic support, depending on the set of genes; they exhibited an overlapping and diversified range of host species and are not reproductively isolated from one another. We discuss the ecological conditions and mechanisms that likely generated this ongoing speciation and the relevance of this new specialist taxon in the genus Cotesia for biological control.
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Affiliation(s)
- Laure Kaiser
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France ; INRA, UMR 1392, Institut d'Ecologie et des Sciences de l'Environnement de Paris Paris, France
| | - Bruno Pierre Le Ru
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France ; icipe: African Insect Science for Food and Health Nairobi, Kenya
| | - Ferial Kaoula
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France
| | - Corentin Paillusson
- Institut de Recherche sur la Biologie de l'Insecte, CNRS UMR 7261, Université François-Rabelais, UFR Sciences et Techniques Tours, France
| | - Claire Capdevielle-Dulac
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France
| | | | - Elisabeth A Herniou
- Institut de Recherche sur la Biologie de l'Insecte, CNRS UMR 7261, Université François-Rabelais, UFR Sciences et Techniques Tours, France
| | - Severine Jancek
- Institut de Recherche sur la Biologie de l'Insecte, CNRS UMR 7261, Université François-Rabelais, UFR Sciences et Techniques Tours, France
| | - Antoine Branca
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France ; Ecologie, Systématique et Evolution, UMR - 8079 UPS-CNRS-AgroParisTech, Univ. Paris-Sud Orsay Cedex, France
| | - Paul-André Calatayud
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France ; icipe: African Insect Science for Food and Health Nairobi, Kenya
| | - Jean-François Silvain
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France
| | - Stephane Dupas
- Laboratoire Evolution, Génomes, Comportement et Ecologie, UMR CNRS-Univ. Paris-Sud-IRD, Univ. Paris-Saclay Gif-sur-Yvette Cedex, France
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Kobayashi C, Matsuo K, Watanabe K, Nagata N, Suzuki-Ohno Y, Kawata M, Kato M. Arms race between leaf rollers and parasitoids: diversification of plant-manipulation behavior and its consequences. ECOL MONOGR 2015. [DOI: 10.1890/14-0280.1] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Dumas P, Barbut J, Le Ru B, Silvain JF, Clamens AL, d’Alençon E, Kergoat GJ. Phylogenetic molecular species delimitations unravel potential new species in the pest genus Spodoptera Guenée, 1852 (Lepidoptera, Noctuidae). PLoS One 2015; 10:e0122407. [PMID: 25853412 PMCID: PMC4390195 DOI: 10.1371/journal.pone.0122407] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2014] [Accepted: 02/20/2015] [Indexed: 02/03/2023] Open
Abstract
Nowadays molecular species delimitation methods promote the identification of species boundaries within complex taxonomic groups by adopting innovative species concepts and theories (e.g. branching patterns, coalescence). As some of them can efficiently deal with large single-locus datasets, they could speed up the process of species discovery compared to more time consuming molecular methods, and benefit from the existence of large public datasets; these methods can also particularly favour scientific research and actions dealing with threatened or economically important taxa. In this study we aim to investigate and clarify the status of economically important moths species belonging to the genus Spodoptera (Lepidoptera, Noctuidae), a complex group in which previous phylogenetic analyses and integrative approaches already suggested the possible occurrence of cryptic species and taxonomic ambiguities. In this work, the effectiveness of innovative (and faster) species delimitation approaches to infer putative species boundaries has been successfully tested in Spodoptera, by processing the most comprehensive dataset (in terms of number of species and specimens) ever achieved; results are congruent and reliable, irrespective of the set of parameters and phylogenetic models applied. Our analyses confirm the existence of three potential new species clusters (for S. exigua (Hübner, 1808), S. frugiperda (J.E. Smith, 1797) and S. mauritia (Boisduval, 1833)) and support the synonymy of S. marima (Schaus, 1904) with S. ornithogalli (Guenée, 1852). They also highlight the ambiguity of the status of S. cosmiodes (Walker, 1858) and S. descoinsi Lalanne-Cassou & Silvain, 1994. This case study highlights the interest of molecular species delimitation methods as valuable tools for species discovery and to emphasize taxonomic ambiguities.
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Affiliation(s)
- Pascaline Dumas
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | - Jérôme Barbut
- Direction des collections—USM 602, Muséum National d’Histoire Naturelle, Paris, France
| | - Bruno Le Ru
- IRD/CNRS, Laboratoire Evolution Génomes Spéciation, Avenue de la terrasse, Gif-sur-Yvette, France and Université Paris-Sud 11, Orsay, France
- Unité de Recherche IRD 072, African Insect Science for Food and Health (icipe), Nairobi, Kenya
| | - Jean-François Silvain
- IRD/CNRS, Laboratoire Evolution Génomes Spéciation, Avenue de la terrasse, Gif-sur-Yvette, France and Université Paris-Sud 11, Orsay, France
| | - Anne-Laure Clamens
- INRA—UMR 1062 CBGP (INRA, IRD, CIRAD, Montpellier SupAgro), Montferrier-sur-Lez, France
| | - Emmanuelle d’Alençon
- UM2—UMR 1333 DGIMI, Université Montpellier 2, Montpellier, France
- INRA—UMR 1333 DGIMI, Université Montpellier 2, Montpellier, France
| | - Gael J. Kergoat
- INRA—UMR 1062 CBGP (INRA, IRD, CIRAD, Montpellier SupAgro), Montferrier-sur-Lez, France
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20
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Li Y, Gunter N, Pang H, Bocak L. DNA-based species delimitation separates highly divergent populations within morphologically coherent clades of poorly dispersing beetles. Zool J Linn Soc 2015. [DOI: 10.1111/zoj.12262] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Affiliation(s)
- Yun Li
- The Museum of Biology; Sun Yat-sen University; Guangzhou 510275 Guangdong China
- Department of Zoology; Faculty of Science; Palacky University; 17. listopadu 50 771 46 Olomouc Czech Republic
| | - Nicole Gunter
- Department of Zoology; Faculty of Science; Palacky University; 17. listopadu 50 771 46 Olomouc Czech Republic
| | - Hong Pang
- The Museum of Biology; Sun Yat-sen University; Guangzhou 510275 Guangdong China
| | - Ladislav Bocak
- Department of Zoology; Faculty of Science; Palacky University; 17. listopadu 50 771 46 Olomouc Czech Republic
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21
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Focus on the details: morphological evidence supports new cryptic land flatworm (Platyhelminthes) species revealed with molecules. ORG DIVERS EVOL 2015. [DOI: 10.1007/s13127-014-0197-z] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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22
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Chemical communication and host search in Galerucella leaf beetles. CHEMOECOLOGY 2015; 25:33-45. [PMID: 25598578 PMCID: PMC4289973 DOI: 10.1007/s00049-014-0174-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2014] [Accepted: 10/09/2014] [Indexed: 11/19/2022]
Abstract
Herbivore insects use a variety of search cues during host finding and mate recognition, including visual, gustatory, and olfactory stimuli, leaving multiple traits for evolution to act upon. However, information about differences or similarities in search pattern amongst closely related insect herbivore species is still scarce. Here, we study the production of and the response to pheromone in Galerucella (Coleoptera: Chrysomelidae) to investigate the beetles’ search behaviour. Males of G. pusilla and G. calmariensis, two closely related species, are known to produce the aggregation pheromone dimethylfuran-lactone when feeding on their host plant, whereas no pheromones have been identified in other Galerucella species. We show that dimethylfuran-lactone is produced also by males of G. tenella, a species phylogenetically close to G. pusilla and G. calmariensis, whereas the more distantly related species G. lineola and G. sagittariae were not found to produce the same compound. To investigate the beetles’ behavioural response to dimethylfuran-lactone, the pheromone was synthesized using a partly novel method and tested in olfactometers, showing that G. pusilla, G. calmariensis, and G. tenella were all attracted to the pheromone, whereas G. lineola and G. sagittariae did not respond. This suggests that the production of and the response to pheromone could be linked to the phylogenetic relatedness between the species.
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Martinsson S, Rota E, Erséus C. Revision ofCognettia(Clitellata, Enchytraeidae): re-establishment ofChamaedrilusand description of cryptic species in thesphagnetorumcomplex. SYST BIODIVERS 2014. [DOI: 10.1080/14772000.2014.986555] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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24
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Adler PH, Inci A, Yildirim A, Duzlu O, McCreadie JW, Kúdela M, Khazeni A, Brúderová T, Seitz G, Takaoka H, Otsuka Y, Bass J. Are black flies of the subgenusWilhelmia(Diptera: Simuliidae) multiple species or a single geographical generalist? Insights from the macrogenome. Biol J Linn Soc Lond 2014. [DOI: 10.1111/bij.12403] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Peter H. Adler
- Entomology Program; Clemson University; Clemson SC 29634-0310 USA
| | - Abdullah Inci
- Department of Parasitology; Faculty of Veterinary Medicine; Erciyes University; Kayseri Turkey
| | - Alparslan Yildirim
- Department of Parasitology; Faculty of Veterinary Medicine; Erciyes University; Kayseri Turkey
| | - Onder Duzlu
- Department of Parasitology; Faculty of Veterinary Medicine; Erciyes University; Kayseri Turkey
| | - John W. McCreadie
- Department of Biological Sciences; University of South Alabama; Mobile AL 36688 USA
| | - Matúš Kúdela
- Department of Zoology; Comenius University; SK 842 15 Bratislava Slovakia
| | - Atefeh Khazeni
- Department of Parasitology and Mycology; Isfahan University of Medical Sciences; Isfahan 73461-81746 Iran
| | - Tatiana Brúderová
- Department of Zoology; Comenius University; SK 842 15 Bratislava Slovakia
| | - Gunther Seitz
- District Government of Lower Bavaria; Regierungsplatz 540 84028 Landshut Germany
| | - Hiroyuki Takaoka
- Institute of Biological Sciences; University of Malaya; Kuala Lumpur 50603 Malaysia
| | - Yasushi Otsuka
- Research Center for Pacific Islands; Kagoshima University; Korimoto 1-21-24 Kagoshima 890-8580 Japan
| | - Jon Bass
- The Wessex Chalk Stream and Rivers Trust; Kimbridge SO51 0LE UK
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Fors L, Markus R, Theopold U, Hambäck PA. Differences in cellular immune competence explain parasitoid resistance for two coleopteran species. PLoS One 2014; 9:e108795. [PMID: 25259576 PMCID: PMC4178244 DOI: 10.1371/journal.pone.0108795] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2014] [Accepted: 09/03/2014] [Indexed: 11/18/2022] Open
Abstract
The immune defence of an organism is evolving continuously, causing counteradaptations in interacting species, which in turn affect other ecological and evolutionary processes. Until recently comparative studies of species interactions and immunity, combining information from both ecological and immunological fields, have been rare. The cellular immune defense in insects, mainly mediated by circulating hemocytes, has been studied primarily in Lepidoptera and Diptera, whereas corresponding information about coleopteran species is still scarce. In the study presented here, we used two closely related chrysomelids, Galerucella pusilla and G. calmariensis (Coleoptera), both attacked by the same parasitoid, Asecodes parviclava (Hymenoptera). In order to investigate the structure of the immune system in Galerucella and to detect possible differences between the two species, we combined ecological studies with controlled parasitism experiments, followed by an investigation of the cell composition in the larval hemolymph. We found a striking difference in parasitism rate between the species, as well as in the level of successful immune response (i.e. encapsulation and melanisation of parasitoid eggs), with G. pusilla showing a much more potent immune defense than G. calmariensis. These differences were linked to differences in the larval cell composition, where hemocyte subsets in both naïve and parasitised individuals differed significantly between the species. In particular, the hemocytes shown to be active in the encapsulation process; phagocytes, lamellocytes and granulocytes, differ between the species, indicating that the cell composition reflects the ability to defend against the parasitoid.
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Affiliation(s)
- Lisa Fors
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
- * E-mail:
| | - Robert Markus
- Department of Neurosciences, Stockholm University, Stockholm, Sweden
| | - Ulrich Theopold
- Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden
| | - Peter A. Hambäck
- Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden
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Zhang C, Rannala B, Yang Z. Bayesian species delimitation can be robust to guide-tree inference errors. Syst Biol 2014; 63:993-1004. [PMID: 25096853 PMCID: PMC4195854 DOI: 10.1093/sysbio/syu052] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Chi Zhang
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden; Genome Center and Section of Evolution and Ecology, University of California at Davis, One Shields Avenue, Davis, CA 95616, USA; Department of Genetics, Evolution and Environment, University College London, Darwin Building, Gower Street, London WC1E 6BT, UK; and Center for Computational Genomics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China
| | - Bruce Rannala
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden; Genome Center and Section of Evolution and Ecology, University of California at Davis, One Shields Avenue, Davis, CA 95616, USA; Department of Genetics, Evolution and Environment, University College London, Darwin Building, Gower Street, London WC1E 6BT, UK; and Center for Computational Genomics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China
| | - Ziheng Yang
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden; Genome Center and Section of Evolution and Ecology, University of California at Davis, One Shields Avenue, Davis, CA 95616, USA; Department of Genetics, Evolution and Environment, University College London, Darwin Building, Gower Street, London WC1E 6BT, UK; and Center for Computational Genomics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden; Genome Center and Section of Evolution and Ecology, University of California at Davis, One Shields Avenue, Davis, CA 95616, USA; Department of Genetics, Evolution and Environment, University College London, Darwin Building, Gower Street, London WC1E 6BT, UK; and Center for Computational Genomics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing 100101, China
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Tonini JFR, Forlani MC, de Sá RO. A new species of Chiasmocleis (Microhylidae, Gastrophryninae) from the Atlantic Forest of Espírito Santo State, Brazil. Zookeys 2014; 428:109-32. [PMID: 25161370 PMCID: PMC4140523 DOI: 10.3897/zookeys.428.7352] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Accepted: 07/14/2014] [Indexed: 11/12/2022] Open
Abstract
Among Neotropical microhylids, the genus Chiasmocleis is exceptionally diverse. Most species of Chiasmocleis were described in recent years based on external morphology, but recent studies using molecular data did not support the monophyly of the species groups clustered based on feet webbing. Furthermore, a phylogeographic study of C. lacrimae estimated high genetic divergence and low gene flow among populations across small geographic ranges. Increasing the molecular and geographic sampling, and incorporating morphological data, we identified new cryptic species. Herein, we used novel genetic and morphological data to describe a new species of Chiasmocleis.
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Affiliation(s)
- João F. R. Tonini
- Department of Biology, University of Richmond, Richmond, VA 23173, USA
- Current Address: Department of Biological Sciences, The George Washington University, Washington, DC 20052, USA
| | | | - Rafael O. de Sá
- Department of Biology, University of Richmond, Richmond, VA 23173, USA
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