1
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Sawano S, Kodera S, Setoguchi N, Tanabe K, Kushida S, Kanda J, Saji M, Nanasato M, Maki H, Fujita H, Kato N, Watanabe H, Suzuki M, Takahashi M, Sawada N, Yamasaki M, Sato M, Katsushika S, Shinohara H, Takeda N, Fujiu K, Daimon M, Akazawa H, Morita H, Komuro I. Applying masked autoencoder-based self-supervised learning for high-capability vision transformers of electrocardiographies. PLoS One 2024; 19:e0307978. [PMID: 39141600 PMCID: PMC11324121 DOI: 10.1371/journal.pone.0307978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2023] [Accepted: 07/15/2024] [Indexed: 08/16/2024] Open
Abstract
The generalization of deep neural network algorithms to a broader population is an important challenge in the medical field. We aimed to apply self-supervised learning using masked autoencoders (MAEs) to improve the performance of the 12-lead electrocardiography (ECG) analysis model using limited ECG data. We pretrained Vision Transformer (ViT) models by reconstructing the masked ECG data with MAE. We fine-tuned this MAE-based ECG pretrained model on ECG-echocardiography data from The University of Tokyo Hospital (UTokyo) for the detection of left ventricular systolic dysfunction (LVSD), and then evaluated it using multi-center external validation data from seven institutions, employing the area under the receiver operating characteristic curve (AUROC) for assessment. We included 38,245 ECG-echocardiography pairs from UTokyo and 229,439 pairs from all institutions. The performances of MAE-based ECG models pretrained using ECG data from UTokyo were significantly higher than that of other Deep Neural Network models across all external validation cohorts (AUROC, 0.913-0.962 for LVSD, p < 0.001). Moreover, we also found improvements for the MAE-based ECG analysis model depending on the model capacity and the amount of training data. Additionally, the MAE-based ECG analysis model maintained high performance even on the ECG benchmark dataset (PTB-XL). Our proposed method developed high performance MAE-based ECG analysis models using limited ECG data.
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Affiliation(s)
- Shinnosuke Sawano
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Satoshi Kodera
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Naoto Setoguchi
- Division of Cardiology, Mitsui Memorial Hospital, Tokyo, Japan
| | - Kengo Tanabe
- Division of Cardiology, Mitsui Memorial Hospital, Tokyo, Japan
| | - Shunichi Kushida
- Department of Cardiovascular Medicine, Asahi General Hospital, Chiba, Japan
| | - Junji Kanda
- Department of Cardiovascular Medicine, Asahi General Hospital, Chiba, Japan
| | - Mike Saji
- Department of Cardiology, Sakakibara Heart Institute, Tokyo, Japan
| | - Mamoru Nanasato
- Department of Cardiology, Sakakibara Heart Institute, Tokyo, Japan
| | - Hisataka Maki
- Division of Cardiovascular Medicine, Saitama Medical Center, Jichi Medical University, Omiya, Japan
| | - Hideo Fujita
- Division of Cardiovascular Medicine, Saitama Medical Center, Jichi Medical University, Omiya, Japan
| | - Nahoko Kato
- Department of Cardiology, Tokyo Bay Medical Center, Urayasu, Japan
| | | | - Minami Suzuki
- Department of Cardiology, JR General Hospital, Tokyo, Japan
| | | | - Naoko Sawada
- Department of Cardiology, NTT Medical Center Tokyo, Tokyo, Japan
| | - Masao Yamasaki
- Department of Cardiology, NTT Medical Center Tokyo, Tokyo, Japan
| | - Masataka Sato
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Susumu Katsushika
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Hiroki Shinohara
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Norifumi Takeda
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Katsuhito Fujiu
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
- Department of Advanced Cardiology, The University of Tokyo, Tokyo, Japan
| | - Masao Daimon
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
- Department of Clinical Laboratory, The University of Tokyo Hospital, Tokyo, Japan
| | - Hiroshi Akazawa
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Hiroyuki Morita
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
| | - Issei Komuro
- Department of Cardiovascular Medicine, The University of Tokyo Hospital, Tokyo, Japan
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2
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Zhang G, Wang Z, Tong Z, Qin Z, Su C, Li D, Xu S, Li K, Zhou Z, Xu Y, Zhang S, Wu R, Li T, Zheng Y, Zhang J, Cheng K, Tang J. AI hybrid survival assessment for advanced heart failure patients with renal dysfunction. Nat Commun 2024; 15:6756. [PMID: 39117613 PMCID: PMC11310499 DOI: 10.1038/s41467-024-50415-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Accepted: 07/10/2024] [Indexed: 08/10/2024] Open
Abstract
Renal dysfunction (RD) often characterizes the worse course of patients with advanced heart failure (AHF). Many prognosis assessments are hindered by researcher biases, redundant predictors, and lack of clinical applicability. In this study, we enroll 1736 AHF/RD patients, including data from Henan Province Clinical Research Center for Cardiovascular Diseases (which encompasses 11 hospital subcenters), and Beth Israel Deaconess Medical Center. We developed an AI hybrid modeling framework, assembling 12 learners with different feature selection paradigms to expand modeling schemes. The optimized strategy is identified from 132 potential schemes to establish an explainable survival assessment system: AIHFLevel. The conditional inference survival tree determines a probability threshold for prognostic stratification. The evaluation confirmed the system's robustness in discrimination, calibration, generalization, and clinical implications. AIHFLevel outperforms existing models, clinical features, and biomarkers. We also launch an open and user-friendly website www.hf-ai-survival.com , empowering healthcare professionals with enhanced tools for continuous risk monitoring and precise risk profiling.
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Affiliation(s)
- Ge Zhang
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China
| | - Zeyu Wang
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China
| | - Zhuang Tong
- Henan Academy of Medical Big Data, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Zhen Qin
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China
| | - Chang Su
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China
| | - Demin Li
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China
| | - Shuai Xu
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China
| | - Kaixiang Li
- Henan Academy of Medical Big Data, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Zhaokai Zhou
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
- Department of Pharmacy, The Second Xiangya Hospital of Central South University, Changsha, Hunan, 410011, China
| | - Yudi Xu
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Shiqian Zhang
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Ruhao Wu
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Teng Li
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Youyang Zheng
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China
| | - Jinying Zhang
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China.
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China.
| | - Ke Cheng
- Department of Biomedical Engineering, Columbia University, New York City, New York, 10032, NY, USA.
| | - Junnan Tang
- Department of Cardiology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.
- Henan Province Key Laboratory of Cardiac Injury and Repair, Zhengzhou, Henan, 450052, China.
- Henan Province Clinical Research Center for Cardiovascular Diseases, Zhengzhou, 450052, Henan, China.
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Pereira TMC, Conceição RC, Sencadas V, Sebastião R. Biometric Recognition: A Systematic Review on Electrocardiogram Data Acquisition Methods. SENSORS (BASEL, SWITZERLAND) 2023; 23:1507. [PMID: 36772546 PMCID: PMC9921530 DOI: 10.3390/s23031507] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 01/24/2023] [Accepted: 01/27/2023] [Indexed: 06/17/2023]
Abstract
In the last decades, researchers have shown the potential of using Electrocardiogram (ECG) as a biometric trait due to its uniqueness and hidden nature. However, despite the great number of approaches found in the literature, no agreement exists on the most appropriate methodology. This paper presents a systematic review of data acquisition methods, aiming to understand the impact of some variables from the data acquisition protocol of an ECG signal in the biometric identification process. We searched for papers on the subject using Scopus, defining several keywords and restrictions, and found a total of 121 papers. Data acquisition hardware and methods vary widely throughout the literature. We reviewed the intrusiveness of acquisitions, the number of leads used, and the duration of acquisitions. Moreover, by analyzing the literature, we can conclude that the preferable solutions include: (1) the use of off-the-person acquisitions as they bring ECG biometrics closer to viable, unconstrained applications; (2) the use of a one-lead setup; and (3) short-term acquisitions as they required fewer numbers of contact points, making the data acquisition of benefit to user acceptance and allow faster acquisitions, resulting in a user-friendly biometric system. Thus, this paper reviews data acquisition methods, summarizes multiple perspectives, and highlights existing challenges and problems. In contrast, most reviews on ECG-based biometrics focus on feature extraction and classification methods.
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Affiliation(s)
| | - Raquel C. Conceição
- Instituto de Biofísica e Engenharia Biomédica, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Vitor Sencadas
- Instituto de Materiais (CICECO), Departamento de Materiais e Cerâmica, Universidade de Aveiro, 3810-193 Aveiro, Portugal
| | - Raquel Sebastião
- IEETA, DETI, LASI, Universidade de Aveiro, 3810-193 Aveiro, Portugal
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4
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Classification of cardiac electrical signals between patients with myocardial infarction and normal subjects by using nonlinear dynamics features and different classification models. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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5
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Human-Assisted vs. Deep Learning Feature Extraction: An Evaluation of ECG Features Extraction Methods for Arrhythmia Classification Using Machine Learning. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12157404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The success of arrhythmia classification tasks with Machine Learning (ML) algorithms is based on the handcrafting extraction of features from Electrocardiography (ECG) signals. However, feature extraction is a time-consuming trial-and-error approach. Deep Neural Network (DNN) algorithms bypass the process of handcrafting feature extraction since the algorithm extracts the features automatically in their hidden layers. However, it is important to have access to a balanced dataset for algorithm training. In this exploratory research study, we will compare the evaluation metrics among Convolutional Neural Networks (1D-CNN) and Support Vector Machines (SVM) using a dataset based on the merged public ECG signals database TNMG and CINC17 databases. Results: Both algorithms showed good performance using the new, merged ECG database. For evaluation metrics, the 1D-CNN algorithm has a precision of 93.04%, an accuracy of 93.07%, a recall of 93.20%, and an F1-score of 93.05%. The SVM classifier (λ = 10, C = 10e9) achieved the best classification metrics with two combined, handcrafted feature extraction methods: Wavelet transforms and R-peak Interval features, which achieved an overall precision of 89.04%, accuracy of 92.00%, recall of 94.20%, and F1-score of 91.54%. As an unique input feature and SVM (λ=10,C=100), wavelet transforms achieved precision, accuracy, recall, and F1-score metrics of 86.15%, 85.33%, 81.16%, and 83.58%. Conclusion: Researchers face a challenge in finding a broad dataset to evaluate ML models. One way to solve this problem, especially for deep learning models, is to combine several public datasets to increase the amount of data. The SVM and 1D-CNN algorithms showed positive results with the merge of databases, showing similar F1-score, precision, and recall during arrhythmia classification. Despite the favorable results for both of them, it should be considered that in the SVM, feature selection is a time-consuming trial-and-error process; meanwhile, CNN algorithms can reduce the workload significantly. The disadvantage of CNN algorithms is that it has a higher computational processing cost; moreover, in the absence of access to powerful computational processing, the SVM can be a reliable solution.
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6
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A New 12-Lead ECG Signals Fusion Method Using Evolutionary CNN Trees for Arrhythmia Detection. MATHEMATICS 2022. [DOI: 10.3390/math10111911] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The 12 leads of electrocardiogram (ECG) signals show the heart activities from different angles of coronal and axial planes; hence, the signals of these 12 leads have functional dependence on each other. This paper proposes a novel method for fusing the data of 12-lead ECG signals to diagnose heart problems. In the first phase of the proposed method, the time-frequency transform is employed to fuse the functional data of leads and extract the frequency data of ECG signals in 12 leads. After that, their dependence is evaluated through the correlation analysis. In the second phase, a structural learning method is adopted to extract the structural data from these 12 leads. Moreover, deep convolutional neural network (CNN) models are coded in this phase through genetic programming. These trees are responsible for learning deep structural features from functional data extracted from 12 leads. These trees are upgraded through the execution of the genetic programming (GP) algorithm to extract the optimal features. These two phases are used together to fuse the leads of ECG signals to diagnose various heart problems. According to the test results on ChapmanECG, including the signals of 10,646 patients, the proposed method enjoys the mean accuracy of 97.60% in the diagnosis of various types of arrhythmias in the Chapman dataset. It also outperformed the state-of-the-art methods.
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7
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Evaluation model and algorithm of intelligent manufacturing system based on pattern recognition and big data. Soft comput 2022. [DOI: 10.1007/s00500-022-07030-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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8
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A novel hybrid deep learning method with cuckoo search algorithm for classification of arrhythmia disease using ECG signals. Neural Comput Appl 2021. [DOI: 10.1007/s00521-021-06005-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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9
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Al Hinai G, Jammoul S, Vajihi Z, Afilalo J. Deep learning analysis of resting electrocardiograms for the detection of myocardial dysfunction, hypertrophy, and ischaemia: a systematic review. EUROPEAN HEART JOURNAL. DIGITAL HEALTH 2021; 2:416-423. [PMID: 34604757 PMCID: PMC8482047 DOI: 10.1093/ehjdh/ztab048] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Revised: 04/14/2021] [Indexed: 01/31/2023]
Abstract
The aim of this review was to assess the evidence for deep learning (DL) analysis of resting electrocardiograms (ECGs) to predict structural cardiac pathologies such as left ventricular (LV) systolic dysfunction, myocardial hypertrophy, and ischaemic heart disease. A systematic literature search was conducted to identify published original articles on end-to-end DL analysis of resting ECG signals for the detection of structural cardiac pathologies. Studies were excluded if the ECG was acquired by ambulatory, stress, intracardiac, or implantable devices, and if the pathology of interest was arrhythmic in nature. After duplicate reviewers screened search results, 12 articles met the inclusion criteria and were included. Three articles used DL to detect LV systolic dysfunction, achieving an area under the curve (AUC) of 0.89-0.93 and an accuracy of 98%. One study used DL to detect LV hypertrophy, achieving an AUC of 0.87 and an accuracy of 87%. Six articles used DL to detect acute myocardial infarction, achieving an AUC of 0.88-1.00 and an accuracy of 83-99.9%. Two articles used DL to detect stable ischaemic heart disease, achieving an accuracy of 95-99.9%. Deep learning models, particularly those that used convolutional neural networks, outperformed rules-based models and other machine learning models. Deep learning is a promising technique to analyse resting ECG signals for the detection of structural cardiac pathologies, which has clinical applicability for more effective screening of asymptomatic populations and expedited diagnostic work-up of symptomatic patients at risk for cardiovascular disease.
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Affiliation(s)
- Ghalib Al Hinai
- Division of Cardiology, Jewish General Hospital, McGill University, 3755 Cote Ste Catherine Rd, E-222, Montreal, QC H3T 1E2, Canada
| | - Samer Jammoul
- Division of Cardiology, Jewish General Hospital, McGill University, 3755 Cote Ste Catherine Rd, E-222, Montreal, QC H3T 1E2, Canada
| | - Zara Vajihi
- Department of Emergency Medicine, Jewish General Hospital, McGill University, 3755 Cote Ste Catherine Rd, H-126, Montreal, QC H3T 1E2, Canada
| | - Jonathan Afilalo
- Division of Cardiology, Jewish General Hospital, McGill University, 3755 Cote Ste Catherine Rd, E-222, Montreal, QC H3T 1E2, Canada
- Centre for Clinical Epidemiology, Jewish General Hospital, 3755 Cote Ste Catherine Rd, H-411, Montreal, QC H3T 1E2, Canada
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10
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Idrobo-Ávila E, Loaiza-Correa H, Muñoz-Bolaños F, van Noorden L, Vargas-Cañas R. A Proposal for a Data-Driven Approach to the Influence of Music on Heart Dynamics. Front Cardiovasc Med 2021; 8:699145. [PMID: 34490368 PMCID: PMC8417899 DOI: 10.3389/fcvm.2021.699145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Accepted: 07/20/2021] [Indexed: 11/13/2022] Open
Abstract
Electrocardiographic signals (ECG) and heart rate viability measurements (HRV) provide information in a range of specialist fields, extending to musical perception. The ECG signal records heart electrical activity, while HRV reflects the state or condition of the autonomic nervous system. HRV has been studied as a marker of diverse psychological and physical diseases including coronary heart disease, myocardial infarction, and stroke. HRV has also been used to observe the effects of medicines, the impact of exercise and the analysis of emotional responses and evaluation of effects of various quantifiable elements of sound and music on the human body. Variations in blood pressure, levels of stress or anxiety, subjective sensations and even changes in emotions constitute multiple aspects that may well-react or respond to musical stimuli. Although both ECG and HRV continue to feature extensively in research in health and perception, methodologies vary substantially. This makes it difficult to compare studies, with researchers making recommendations to improve experiment planning and the analysis and reporting of data. The present work provides a methodological framework to examine the effect of sound on ECG and HRV with the aim of associating musical structures and noise to the signals by means of artificial intelligence (AI); it first presents a way to select experimental study subjects in light of the research aims and then offers possibilities for selecting and producing suitable sound stimuli; once sounds have been selected, a guide is proposed for optimal experimental design. Finally, a framework is introduced for analysis of data and signals, based on both conventional as well as data-driven AI tools. AI is able to study big data at a single stroke, can be applied to different types of data, and is capable of generalisation and so is considered the main tool in the analysis.
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Affiliation(s)
- Ennio Idrobo-Ávila
- Escuela de Ingeniería Eléctrica y Electrónica, PSI - Percepción y Sistemas Inteligentes, Universidad del Valle, Cali, Colombia
| | - Humberto Loaiza-Correa
- Escuela de Ingeniería Eléctrica y Electrónica, PSI - Percepción y Sistemas Inteligentes, Universidad del Valle, Cali, Colombia
| | - Flavio Muñoz-Bolaños
- Departamento de Ciencias Fisiológicas, CIFIEX - Ciencias Fisiológicas Experimentales, Universidad del Cauca, Popayán, Colombia
| | - Leon van Noorden
- Department of Art, Music, and Theatre Sciences, IPEM—Institute for Systematic Musicology, Ghent University, Ghent, Belgium
| | - Rubiel Vargas-Cañas
- Departamento de Física, SIDICO - Sistemas Dinámicos, Instrumentación y Control, Universidad del Cauca, Popayán, Colombia
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11
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Maghawry E, Ismail R, Gharib TF. An efficient approach for Paroxysmal Atrial Fibrillation events prediction using Extreme Learning Machine. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS 2021. [DOI: 10.3233/jifs-201832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Paroxysmal Atrial Fibrillation (PAF) is a special class of Atrial Fibrillation. Predicting PAF events from electrocardiogram (ECG) signal streams plays a vital role in generating real-time alerts for cardiac disorders. These alerts are extremely important to cardiologists in taking precautions to prevent their patients from having a stroke. In this study, an effective predictive approach to PAF events using the Extreme Learning Machine classification technique is proposed. Besides, we propose a feature extraction method that integrates new ECG signal features to its time-domain ones. The new features are based on the construction of sparse vectors for peaks in ECG signals that provide high overlap between similar ECGs. The proposed prediction approach with the new ECG features representation were evaluated on a real PAF dataset using the five-fold cross-validation method. Experiments show promising results for predicting PAF in terms of accuracy and execution time compared to other existing studies. The proposed approach achieved classification accuracy of 97% for non-streaming ECG signals mode and 94.4% for streaming mode.
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Affiliation(s)
- Eman Maghawry
- Faculty of Computer and Information Science, Ain Shams University, Cairo, Egypt
| | - Rasha Ismail
- Faculty of Computer and Information Science, Ain Shams University, Cairo, Egypt
| | - Tarek F. Gharib
- Faculty of Computer and Information Science, Ain Shams University, Cairo, Egypt
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12
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Detection of ventricular arrhythmia using hybrid time-frequency-based features and deep neural network. Phys Eng Sci Med 2021; 44:135-145. [PMID: 33417159 DOI: 10.1007/s13246-020-00964-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Accepted: 12/15/2020] [Indexed: 12/24/2022]
Abstract
Sudden cardiac death (SCD) is a major cause of death among patients with heart diseases. It occurs mainly due to ventricular tachyarrhythmia (VTA) which includes ventricular tachycardia (VT) and ventricular fibrillation (VF) conditions. The main challenging task is to predict the VTA condition at a faster rate and timely application of automatic external defibrillator (AED) for saving lives. In this study, a VF/VT classification scheme has been proposed using a deep neural network (DNN) approach using hybrid time-frequency-based features. Two annotated public domain ECG databases (CUDB and VFDB) were used as training, test, and validation of datasets. The main motivation of this study was to implement a deep learning model for the classification of the VF/VT conditions and compared the results with other standard machine learning algorithms. The signal is decomposed with the wavelet transform, empirical mode decomposition (EMD) and variable mode decomposition (VMD) approaches and twenty-four are extracted to form a hybrid model from a window of length 5 s length. The DNN classifier achieved an accuracy (Acc) of 99.2%, sensitivity (Se) of 98.8%, and specificity (Sp) of 99.3% which is comparatively better than the results of the standard classifier. The proposed algorithm can detect VTA conditions accurately, hence could reduce the rate of misinterpretations by human experts and improves the efficiency of cardiac diagnosis by ECG signal analysis.
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13
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Mitchell KJ, Schwarzwald CC. Heart rate variability analysis in horses for the diagnosis of arrhythmias. Vet J 2020; 268:105590. [PMID: 33468305 DOI: 10.1016/j.tvjl.2020.105590] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Revised: 11/29/2020] [Accepted: 11/30/2020] [Indexed: 12/16/2022]
Abstract
Heart rate variability (HRV) analysis has been performed on ECG-derived data sets for more than 170 years but is currently undergoing a rapid evolution, thanks to the expansion of the human and veterinary medical technology sector. Traditional HRV analysis was initially performed to identify changes in vago-sympathetic balance, while the most recent focus has expanded to include the use of complex computer algorithms, neural networks and machine learning technology to identify cardiac arrhythmias, particularly atrial fibrillation (AF). Some of these techniques have recently been translated for use in the field of equine cardiology, with particular focus on improving the diagnosis of arrhythmias both at rest and during exercise. This review focuses on understanding the basic HRV variables and important factors to consider when collecting data for use in HRV analysis. In addition, the use of HRV analysis for the diagnosis of arrhythmias is discussed from human, small animal and equine perspectives. Finally, the future of HRV analysis is briefly introduced, including an overview of future developments in this rapidly expanding and exciting field.
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Affiliation(s)
- Katharyn J Mitchell
- Equine Department, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, Zurich, 8057, Switzerland.
| | - Colin C Schwarzwald
- Equine Department, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, Zurich, 8057, Switzerland
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14
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Bognár G, Fridli S. ECG heartbeat classification by means of variable rational projection. Biomed Signal Process Control 2020. [DOI: 10.1016/j.bspc.2020.102034] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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15
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Abstract
Cardiovascular disease (CVD) is the most common class of chronic and life-threatening diseases and, therefore, considered to be one of the main causes of mortality. The proposed new neural architecture based on the recent popularity of convolutional neural networks (CNN) was a solution for the development of automatic heart disease diagnosis systems using electrocardiogram (ECG) signals. More specifically, ECG signals were passed directly to a properly trained CNN network. The database consisted of more than 4000 ECG signal instances extracted from outpatient ECG examinations obtained from 47 subjects: 25 males and 22 females. The confusion matrix derived from the testing dataset indicated 99% accuracy for the “normal” class. For the “atrial premature beat” class, ECG segments were correctly classified 100% of the time. Finally, for the “premature ventricular contraction” class, ECG segments were correctly classified 96% of the time. In total, there was an average classification accuracy of 98.33%. The sensitivity (SNS) and the specificity (SPC) were, respectively, 98.33% and 98.35%. The new approach based on deep learning and, in particular, on a CNN network guaranteed excellent performance in automatic recognition and, therefore, prevention of cardiovascular diseases.
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Jhee JH, Lee S, Park Y, Lee SE, Kim YA, Kang SW, Kwon JY, Park JT. Prediction model development of late-onset preeclampsia using machine learning-based methods. PLoS One 2019; 14:e0221202. [PMID: 31442238 PMCID: PMC6707607 DOI: 10.1371/journal.pone.0221202] [Citation(s) in RCA: 76] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Accepted: 08/01/2019] [Indexed: 11/18/2022] Open
Abstract
Preeclampsia is one of the leading causes of maternal and fetal morbidity and mortality. Due to the lack of effective preventive measures, its prediction is essential to its prompt management. This study aimed to develop models using machine learning to predict late-onset preeclampsia using hospital electronic medical record data. The performance of the machine learning based models and models using conventional statistical methods were also compared. A total of 11,006 pregnant women who received antenatal care at Yonsei University Hospital were included. Maternal data were retrieved from electronic medical records during the early second trimester to 34 weeks. The prediction outcome was late-onset preeclampsia occurrence after 34 weeks’ gestation. Pattern recognition and cluster analysis were used to select the parameters included in the prediction models. Logistic regression, decision tree model, naïve Bayes classification, support vector machine, random forest algorithm, and stochastic gradient boosting method were used to construct the prediction models. C-statistics was used to assess the performance of each model. The overall preeclampsia development rate was 4.7% (474 patients). Systolic blood pressure, serum blood urea nitrogen and creatinine levels, platelet counts, serum potassium level, white blood cell count, serum calcium level, and urinary protein were the most influential variables included in the prediction models. C-statistics for the decision tree model, naïve Bayes classification, support vector machine, random forest algorithm, stochastic gradient boosting method, and logistic regression models were 0.857, 0.776, 0.573, 0.894, 0.924, and 0.806, respectively. The stochastic gradient boosting model had the best prediction performance with an accuracy and false positive rate of 0.973 and 0.009, respectively. The combined use of maternal factors and common antenatal laboratory data of the early second trimester through early third trimester could effectively predict late-onset preeclampsia using machine learning algorithms. Future prospective studies are needed to verify the clinical applicability algorithms.
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Affiliation(s)
- Jong Hyun Jhee
- Division of Nephrology, Department of Internal Medicine, Gangnam Severance Hospital, Yonsei University College of Medicine, Seoul, Korea
- Department of Internal Medicine, College of Medicine, Institute of Kidney Disease Research, Yonsei University, Seoul, Korea
| | - SungHee Lee
- Department of Preventive Medicine, Yonsei University College of Medicine, Seoul, Korea
- Biostatics Collaboration Unit, Yonsei University College of Medicine, Seoul, Korea
| | - Yejin Park
- Division of Maternal-Fetal Medicine, Institute of Women’s Medical Life Science, Department of Obstetrics and Gynecology, Yonsei University College of Medicine, Seoul, Korea
| | - Sang Eun Lee
- Department of Preventive Medicine, Yonsei University College of Medicine, Seoul, Korea
- Biostatics Collaboration Unit, Yonsei University College of Medicine, Seoul, Korea
| | - Young Ah Kim
- Department of Medical Informatics, Yonsei University Health System, Seoul, Korea
| | - Shin-Wook Kang
- Department of Internal Medicine, College of Medicine, Institute of Kidney Disease Research, Yonsei University, Seoul, Korea
| | - Ja-Young Kwon
- Division of Maternal-Fetal Medicine, Institute of Women’s Medical Life Science, Department of Obstetrics and Gynecology, Yonsei University College of Medicine, Seoul, Korea
- * E-mail: (JTP); (JYK)
| | - Jung Tak Park
- Department of Internal Medicine, College of Medicine, Institute of Kidney Disease Research, Yonsei University, Seoul, Korea
- * E-mail: (JTP); (JYK)
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17
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Deep Learning and Big Data in Healthcare: A Double Review for Critical Beginners. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9112331] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
In the last few years, there has been a growing expectation created about the analysis of large amounts of data often available in organizations, which has been both scrutinized by the academic world and successfully exploited by industry. Nowadays, two of the most common terms heard in scientific circles are Big Data and Deep Learning. In this double review, we aim to shed some light on the current state of these different, yet somehow related branches of Data Science, in order to understand the current state and future evolution within the healthcare area. We start by giving a simple description of the technical elements of Big Data technologies, as well as an overview of the elements of Deep Learning techniques, according to their usual description in scientific literature. Then, we pay attention to the application fields that can be said to have delivered relevant real-world success stories, with emphasis on examples from large technology companies and financial institutions, among others. The academic effort that has been put into bringing these technologies to the healthcare sector are then summarized and analyzed from a twofold view as follows: first, the landscape of application examples is globally scrutinized according to the varying nature of medical data, including the data forms in electronic health recordings, medical time signals, and medical images; second, a specific application field is given special attention, in particular the electrocardiographic signal analysis, where a number of works have been published in the last two years. A set of toy application examples are provided with the publicly-available MIMIC dataset, aiming to help the beginners start with some principled, basic, and structured material and available code. Critical discussion is provided for current and forthcoming challenges on the use of both sets of techniques in our future healthcare.
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Gupta V, Mittal M. A Comparison of ECG Signal Pre-processing Using FrFT, FrWT and IPCA for Improved Analysis. Ing Rech Biomed 2019. [DOI: 10.1016/j.irbm.2019.04.003] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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19
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Distributed Kernel Extreme Learning Machines for Aircraft Engine Failure Diagnostics. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9081707] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Kernel extreme learning machine (KELM) has been widely studied in the field of aircraft engine fault diagnostics due to its easy implementation. However, because its computational complexity is proportional to the training sample size, its application in time-sensitive scenarios is limited. Therefore, in the case of largescale samples, the original KELM is difficult to meet the real-time requirements of aircraft engine onboard condition. To address this shortcoming, a novel distributed kernel extreme learning machines (DKELMs) algorithm is proposed in this paper. The distributed subnetwork is adopted to reduce the computational complexity, and then the likelihood probability and Dempster-Shafer (DS) evidence theory is used to design the fusion scheme to ensure the accuracy after fusion is not reduced. Afterwards, the verification on the benchmark datasets shows that the algorithm can greatly reduce the computational complexity and improve the real-time performance of the original KELM algorithm without sacrificing the accuracy of the model. Finally, the performance estimation and fault pattern recognition experiments of an aircraft engine show that, compared with the original KELM algorithm and support vector machine (SVM) algorithm, the proposed algorithm has the best performance considering both real-time capability and model accuracy.
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ECG Signal Denoising and Features Extraction Using Unbiased FIR Smoothing. BIOMED RESEARCH INTERNATIONAL 2019; 2019:2608547. [PMID: 30915349 PMCID: PMC6402224 DOI: 10.1155/2019/2608547] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Revised: 11/21/2018] [Accepted: 12/15/2018] [Indexed: 11/29/2022]
Abstract
Methods of the electrocardiography (ECG) signal features extraction are required to detect heart abnormalities and different kinds of diseases. However, different artefacts and measurement noise often hinder providing accurate features extraction. One of the standard techniques developed for ECG signals employs linear prediction. Referring to the fact that prediction is not required for ECG signal processing, smoothing can be more efficient. In this paper, we employ the p-shift unbiased finite impulse response (UFIR) filter, which becomes smooth by p < 0. We develop this filter to have an adaptive averaging horizon: optimal for slow ECG behaviours and minimal for fast excursions. It is shown that the adaptive UFIR algorithm developed in such a way provides better denoising and suboptimal features extraction in terms of the output signal-noise ratio (SNR). The algorithm is developed to detect durations and amplitudes of the P-wave, QRS-complex, and T-wave in the standard ECG signal map. Better performance of the algorithm designed is demonstrated in a comparison with the standard linear predictor, UFIR filter, and UFIR predictive filter based on real ECG data associated with normal heartbeats.
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21
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Beritelli F, Capizzi G, Lo Sciuto G, Napoli C, Woźniak M. A novel training method to preserve generalization of RBPNN classifiers applied to ECG signals diagnosis. Neural Netw 2018; 108:331-338. [DOI: 10.1016/j.neunet.2018.08.023] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2018] [Revised: 08/24/2018] [Accepted: 08/28/2018] [Indexed: 10/28/2022]
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22
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Tobón-Cardona M, Kenttä T, Porthan K, Tikkanen JT, Oikarinen L, Viitasalo M, Salomaa V, Huikuri HV, Junttila JM, Seppänen T. Waveform prototype-based feature learning for automatic detection of the early repolarization pattern in ECG signals. Physiol Meas 2018; 39:115010. [PMID: 30500784 DOI: 10.1088/1361-6579/aaecef] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE Our aim was to develop an automated detection method, for prescreening purposes, of early repolarization (ER) pattern with slur/notch configuration in electrocardiogram (ECG) signals using a waveform prototype-based feature vector for supervised classification. APPROACH The feature vectors consist of fragments of the ECG signal where the ER pattern is located, instead of abstract descriptive variables of ECG waveforms. The tested classifiers included linear discriminant analysis, k-nearest neighbor algorithm, and support vector machine (SVM). MAIN RESULTS SVM showed the best performance in Friedman tests in our test data including 5676 subjects representing 45 408 leads. Accuracies of the different classifiers showed results well over 90%, indicating that the waveform prototype-based feature vector is an effective representation of the differences between ECG signals with and without the ER pattern. The accuracy of inferior ER was 92.74% and 92.21% for lateral ER. The sensitivity achieved was 91.80% and specificity was 92.73%. SIGNIFICANCE The algorithm presented here showed good performance results, indicating that it could be used as a prescreening tool of ER, and it provides an additional identification of critical cases based on the distances to the classifier decision boundary, which are close to the 0.1 mV threshold and are difficult to label.
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23
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Electrocardiograph Identification Using Hybrid Quantization Sparse Matrix and Multi-Dimensional Approaches. SENSORS 2018; 18:s18124138. [PMID: 30486266 PMCID: PMC6308791 DOI: 10.3390/s18124138] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Revised: 11/18/2018] [Accepted: 11/21/2018] [Indexed: 11/17/2022]
Abstract
Electrocardiograph (ECG) technology is vital for biometric security, and blood oxygen is essential for human survival. In this study, ECG signals and blood oxygen levels are combined to increase the accuracy and efficiency of human identification and verification. The proposed scheme maps the combined biometric information to a matrix and quantifies it as a sparse matrix for reorganizational purposes. Experimental results confirm a much better identification rate than in other ECG-related identification studies. The literature shows no research in human identification using the quantization sparse matrix method with ECG and blood oxygen data combined. We propose a multi-dimensional approach that can improve the accuracy and reduce the complexity of the recognition algorithm.
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24
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25
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Deng M, Wang C, Tang M, Zheng T. Extracting cardiac dynamics within ECG signal for human identification and cardiovascular diseases classification. Neural Netw 2018; 100:70-83. [PMID: 29471197 DOI: 10.1016/j.neunet.2018.01.009] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2017] [Revised: 01/15/2018] [Accepted: 01/19/2018] [Indexed: 11/24/2022]
Abstract
Cardiac characteristics underlying the time/frequency domain features are limited and not comprehensive enough to reflect the temporal/dynamical nature of ECG patterns. This paper proposes a dynamical ECG recognition framework for human identification and cardiovascular diseases classification via a dynamical neural learning mechanism. The proposed method consists of two phases: a training phase and a test phase. In the training phase, cardiac dynamics within ECG signals is extracted (approximated) accurately by using radial basis function (RBF) neural networks through deterministic learning mechanism. The obtained cardiac system dynamics is represented and stored in constant RBF networks. An ECG signature is then derived from the extracted cardiac dynamics along the periodic ECG state trajectories. A bank of estimators is constructed using the extracted cardiac dynamics to represent the trained gait patterns. In the test phase, recognition errors are generated and taken as the similarity measure by comparing the cardiac dynamics of the trained ECG patterns and the dynamics of the test ECG pattern. Rapid recognition of a test ECG pattern begins with measuring the state of test pattern, and automatically proceeds with the evolution of the recognition error system. According to the smallest error principle, the test ECG pattern can be rapidly recognized. This kind of cardiac dynamics information represents the beat-to-beat temporal change of ECG modifications and the temporal/dynamical nature of ECG patterns. Therefore, the amount of discriminability provided by the cardiac dynamics is larger than the original signals. This paper further discusses the extension of the proposed method for cardiovascular diseases classification. The constructed recognition system can distinguish and assign dynamical ECG patterns to predefined classes according to the similarity of cardiac dynamics. Experiments are carried out on the FuWai and PTB ECG databases to demonstrate the effectiveness of the proposed method.
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Affiliation(s)
- Muqing Deng
- Institute of Information and Control, Hangzhou Dianzi University, Hangzhou 310018, China.
| | - Cong Wang
- College of Automation, South China University of Technology, Guangzhou 510640, China.
| | - Min Tang
- State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100000, China
| | - Tongjia Zheng
- College of Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
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26
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Chartrain AG, Kellner CP, Mocco J. Pre-hospital detection of acute ischemic stroke secondary to emergent large vessel occlusion: lessons learned from electrocardiogram and acute myocardial infarction. J Neurointerv Surg 2018; 10:549-553. [PMID: 29298860 DOI: 10.1136/neurintsurg-2017-013428] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Revised: 11/10/2017] [Accepted: 11/13/2017] [Indexed: 11/03/2022]
Abstract
Currently, there is no device capable of detecting acute ischemic stroke (AIS) secondary to emergent large vessel occlusion (ELVO) in the pre-hospital setting. The inability to reliably identify patients that would benefit from primary treatment with endovascular thrombectomy remains an important limitation to optimizing emergency medical services (EMS) triage models and time-to-treatment. Several clinical grading scales that rely solely on clinical examination have been proposed and have demonstrated only moderate predictive ability for ELVO. Consequently, a technology capable of detecting ELVO in the pre-hospital setting would be of great benefit. An analogous scenario existed decades ago, in which pre-hospital detection of acute myocardial infarction (AMI) was unreliable until the emergence of the 12-lead ECG and its adoption by EMS providers. This review details the implementation of pre-hospital ECG (PHECG) for the detection of AMI and explores how early experience with PHECG may be applied to ELVO detection devices, once they become available.
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Affiliation(s)
| | | | - J Mocco
- Department of Neurosurgery, Icahn School of Medicine at Mount Sinai, New York, USA
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27
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Ponomariov V, Chirila L, Apipie FM, Abate R, Rusu M, Wu Z, Liehn EA, Bucur I. Artificial Intelligence versus Doctors' Intelligence: A Glance on Machine Learning Benefaction in Electrocardiography. Discoveries (Craiova) 2017; 5:e76. [PMID: 32309594 PMCID: PMC6941587 DOI: 10.15190/d.2017.6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
Computational machine learning, especially self-enhancing algorithms, prove remarkable effectiveness in applications, including cardiovascular medicine. This review summarizes and cross-compares the current machine learning algorithms applied to electrocardiogram interpretation. In practice, continuous real-time monitoring of electrocardiograms is still difficult to realize. Furthermore, automated ECG interpretation by implementing specific artificial intelligence algorithms is even more challenging. By collecting large datasets from one individual, computational approaches can assure an efficient personalized treatment strategy, such as a correct prediction on patient-specific disease progression, therapeutic success rate and limitations of certain interventions, thus reducing the hospitalization costs and physicians’ workload. Clearly such aims can be achieved by a perfect symbiosis of a multidisciplinary team involving clinicians, researchers and computer scientists. Summarizing, continuous cross-examination between machine intelligence and human intelligence is a combination of precision, rationale and high-throughput scientific engine integrated into a challenging framework of big data science.
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Affiliation(s)
- Victor Ponomariov
- Institute for Molecular Cardiovascular Research (IMCAR), RWTH Aachen University, Germany.,Department of Cardiology, Pulmonology, Angiology and Intensive Care, University Hospital, RWTH Aachen University, Germany
| | | | - Florentina-Mihaela Apipie
- Applied Systems srl, Craiova, Romania.,Faculty of Economic and Business Administration, Doctoral School of Economics, University of Craiova, Romania
| | - Raffaele Abate
- ECUORE LTD, London, England.,School of Medicine, University of Catania, Italy
| | - Mihaela Rusu
- Institute for Molecular Cardiovascular Research, University Hospital, RWTH Aachen, Germany.,IZKF, Aachen, RWTH Aachen, Germany
| | - Zhuojun Wu
- Institute for Molecular Cardiovascular Research (IMCAR), RWTH Aachen University, Germany.,Applied Systems srl, Craiova, Romania
| | - Elisa A Liehn
- Institute for Molecular Cardiovascular Research (IMCAR), RWTH Aachen University, Germany.,Department of Cardiology, Pulmonology, Angiology and Intensive Care, University Hospital, RWTH Aachen University, Germany.,Human Genetic Laboratory, University of Medicine and Pharmacy, Craiova, Romania
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Computational Algorithms Underlying the Time-Based Detection of Sudden Cardiac Arrest via Electrocardiographic Markers. APPLIED SCIENCES-BASEL 2017. [DOI: 10.3390/app7090954] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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29
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Identifying patients with acute total coronary occlusion in NSTEACS: finding the high-risk needle in the haystack. Eur Heart J 2017; 38:3090-3093. [DOI: 10.1093/eurheartj/ehx520] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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30
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Kamarudin ND, Ooi CY, Kawanabe T, Odaguchi H, Kobayashi F. A Fast SVM-Based Tongue's Colour Classification Aided by k-Means Clustering Identifiers and Colour Attributes as Computer-Assisted Tool for Tongue Diagnosis. JOURNAL OF HEALTHCARE ENGINEERING 2017; 2017:7460168. [PMID: 29065640 PMCID: PMC5416652 DOI: 10.1155/2017/7460168] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2016] [Revised: 02/08/2017] [Accepted: 03/08/2017] [Indexed: 11/17/2022]
Abstract
In tongue diagnosis, colour information of tongue body has kept valuable information regarding the state of disease and its correlation with the internal organs. Qualitatively, practitioners may have difficulty in their judgement due to the instable lighting condition and naked eye's ability to capture the exact colour distribution on the tongue especially the tongue with multicolour substance. To overcome this ambiguity, this paper presents a two-stage tongue's multicolour classification based on a support vector machine (SVM) whose support vectors are reduced by our proposed k-means clustering identifiers and red colour range for precise tongue colour diagnosis. In the first stage, k-means clustering is used to cluster a tongue image into four clusters of image background (black), deep red region, red/light red region, and transitional region. In the second-stage classification, red/light red tongue images are further classified into red tongue or light red tongue based on the red colour range derived in our work. Overall, true rate classification accuracy of the proposed two-stage classification to diagnose red, light red, and deep red tongue colours is 94%. The number of support vectors in SVM is improved by 41.2%, and the execution time for one image is recorded as 48 seconds.
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Affiliation(s)
- Nur Diyana Kamarudin
- Embedded System Research Laboratory, Department of Electronics System Engineering, Malaysia-Japan International Institute of Technology, Kuala Lumpur, Malaysia
- Oriental Medicine Research Center, Kitasato University, Minato, Japan
| | - Chia Yee Ooi
- Embedded System Research Laboratory, Department of Electronics System Engineering, Malaysia-Japan International Institute of Technology, Kuala Lumpur, Malaysia
| | - Tadaaki Kawanabe
- Oriental Medicine Research Center, Kitasato University, Minato, Japan
| | - Hiroshi Odaguchi
- Oriental Medicine Research Center, Kitasato University, Minato, Japan
| | - Fuminori Kobayashi
- Embedded System Research Laboratory, Department of Electronics System Engineering, Malaysia-Japan International Institute of Technology, Kuala Lumpur, Malaysia
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Set-Based Discriminative Measure for Electrocardiogram Beat Classification. SENSORS 2017; 17:s17020234. [PMID: 28125072 PMCID: PMC5335983 DOI: 10.3390/s17020234] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/02/2016] [Revised: 01/10/2017] [Accepted: 01/16/2017] [Indexed: 11/16/2022]
Abstract
Computer aided diagnosis systems can help to reduce the high mortality rate among cardiac patients. Automatical classification of electrocardiogram (ECG) beats plays an important role in such systems, but this issue is challenging because of the complexities of ECG signals. In literature, feature designing has been broadly-studied. However, such methodology is inevitably limited by the heuristics of hand-crafting process and the challenge of signals themselves. To address it, we treat the problem of ECG beat classification from the metric and measurement perspective. We propose a novel approach, named “Set-Based Discriminative Measure”, which first learns a discriminative metric space to ensure that intra-class distances are smaller than inter-class distances for ECG features in a global way, and then measures a new set-based dissimilarity in such learned space to cope with the local variation of samples. Experimental results have demonstrated the advantage of this approach in terms of effectiveness, robustness, and flexibility based on ECG beats from the MIT-BIH Arrhythmia Database.
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32
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Merone M, Soda P, Sansone M, Sansone C. ECG databases for biometric systems: A systematic review. EXPERT SYSTEMS WITH APPLICATIONS 2017; 67:189-202. [DOI: 10.1016/j.eswa.2016.09.030] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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34
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Gradl S, Leutheuser H, Elgendi M, Lang N, Eskofier BM. Temporal correction of detected R-peaks in ECG signals: A crucial step to improve QRS detection algorithms. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:522-5. [PMID: 26736314 DOI: 10.1109/embc.2015.7318414] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
In the last decade the interest for heart rate variability analysis has increased tremendously. Related algorithms depend on accurate temporal localization of the heartbeat, e.g. the R-peak in electrocardiogram signals, especially in the presence of arrhythmia. This localization can be delivered by numerous solutions found in the literature which all lack an exact specification of their temporal precision. We implemented three different state-of-the-art algorithms and evaluated the precision of their R-peak localization. We suggest a method to estimate the overall R-peak temporal inaccuracy-dubbed beat slackness-of QRS detectors with respect to normal and abnormal beats. We also propose a simple algorithm that can complement existing detectors to reduce this slackness. Furthermore we define improvements to one of the three detectors allowing it to be used in real-time on mobile devices or embedded hardware. Across the entire MIT-BIH Arrhythmia Database, the average slackness of all the tested algorithms was 9ms for normal beats and 13ms for abnormal beats. Using our complementing algorithm this could be reduced to 4ms for normal beats and to 7ms for abnormal beats. The presented methods can be used to significantly improve the precision of R-peak detection and provide an additional measurement for QRS detector performance.
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35
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Gargiulo F, Fratini A, Sansone M, Sansone C. Subject identification via ECG fiducial-based systems: influence of the type of QT interval correction. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2015; 121:127-136. [PMID: 26143963 DOI: 10.1016/j.cmpb.2015.05.012] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2014] [Revised: 05/20/2015] [Accepted: 05/28/2015] [Indexed: 06/04/2023]
Abstract
Electrocardiography (ECG) has been recently proposed as biometric trait for identification purposes. Intra-individual variations of ECG might affect identification performance. These variations are mainly due to Heart Rate Variability (HRV). In particular, HRV causes changes in the QT intervals along the ECG waveforms. This work is aimed at analysing the influence of seven QT interval correction methods (based on population models) on the performance of ECG-fiducial-based identification systems. In addition, we have also considered the influence of training set size, classifier, classifier ensemble as well as the number of consecutive heartbeats in a majority voting scheme. The ECG signals used in this study were collected from thirty-nine subjects within the Physionet open access database. Public domain software was used for fiducial points detection. Results suggested that QT correction is indeed required to improve the performance. However, there is no clear choice among the seven explored approaches for QT correction (identification rate between 0.97 and 0.99). MultiLayer Perceptron and Support Vector Machine seemed to have better generalization capabilities, in terms of classification performance, with respect to Decision Tree-based classifiers. No such strong influence of the training-set size and the number of consecutive heartbeats has been observed on the majority voting scheme.
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Affiliation(s)
- Francesco Gargiulo
- University of Naples Federico II, Department of Electrical Engineering and Information Technologies, via Claudio 21, 80125 Naples, Italy
| | - Antonio Fratini
- Aston University, School of Life and Health Sciences, Aston Triangle, B4 7ET Birmingham, United Kingdom.
| | - Mario Sansone
- University of Naples Federico II, Department of Electrical Engineering and Information Technologies, via Claudio 21, 80125 Naples, Italy
| | - Carlo Sansone
- University of Naples Federico II, Department of Electrical Engineering and Information Technologies, via Claudio 21, 80125 Naples, Italy.
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