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Laurito M, Ayala AM, Arias-Builes DL, Almirón WR. Improving the DNA Barcode Library of Mosquito Species With New Identifications and Discoveries in North-Central Argentina. JOURNAL OF MEDICAL ENTOMOLOGY 2022; 59:173-183. [PMID: 34661674 DOI: 10.1093/jme/tjab160] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Indexed: 06/13/2023]
Abstract
The family Culicidae is represented by 244 species in Argentina, many of them with epidemiological importance. DNA barcodes are effective tools for identifying mosquito species, for knowing genetic variability, and for establishing phylogenetic relationships. This work aims to explore mosquito diversity employing different species delimitation approaches and to establish formally a DNA barcode library for the Argentinian mosquito fauna. Barcode fragments of 80 specimens of Argentinian mosquitoes of 28 species of the genera Aedeomyia Theobald (Diptera: Culicidae), Anopheles Meigen (Diptera: Culicidae), Coquillettidia Dyar (Diptera: Culicidae), Culex L. (Diptera: Culicidae), Haemagogus Williston (Diptera: Culicidae), Mansonia Blanchard (Diptera: Culicidae), Nyssorhynchus Blanchard (Diptera: Culicidae), Ochlerotatus Lynch-Arribálzaga (Diptera: Culicidae), Psorophora Robinneau-Desvoidy (Diptera: Culicidae) and Uranotaenia Lynch-Arribálzaga (Diptera: Culicidae) were sequenced. Another 82 sequences were obtained from public databases to establish the phylogenetic relationships using Maximum Likelihood and Bayesian Inference, and the species boundaries based on three approaches (ABGD, GMYC, and mPTP). Sixteen of the 28 species sequenced were recovered as monophyletic, of which 12 were also recognized as molecular operational taxonomic units according to the three methodologies. The disparity between morphology and barcode-based identifications could be explained by synonymy, species complexes occurrence, hybridization, incomplete lineage sorting, or the effect of the geographical scale of sampling. Twenty of the 28 sequenced species are new barcodes for Argentina and 11 are the first for science. This increases from 31 to 52 (12.7 to 21.31%) and from six to 10 (28.57 to 47.62%) the number of species and genera, respectively, with barcode sequences in Argentina. New species records are provided.
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Affiliation(s)
- M Laurito
- Universidad Nacional de Córdoba, Facultad de Ciencias Exactas, Físicas y Naturales, Avenida Velez Sarsfield 299, X5000JJC, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Avenida Velez Sarsfield 1611, X5016GCA, Córdoba, Argentina
| | - A M Ayala
- Universidad Nacional de Córdoba, Facultad de Ciencias Exactas, Físicas y Naturales, Avenida Velez Sarsfield 299, X5000JJC, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Instituto de Diversidad y Ecología Animal (IDEA), Avenida Velez Sarsfield 299, X5000JJC, Córdoba, Argentina
| | - D L Arias-Builes
- Centro de Investigación e Innovación Tecnológica (CENIIT), CONICET, Universidad Nacional de La Rioja. Gdor. Luis Vernet and Apostol Felipe, La Rioja, Argentina
| | - W R Almirón
- Universidad Nacional de Córdoba, Facultad de Ciencias Exactas, Físicas y Naturales, Avenida Velez Sarsfield 299, X5000JJC, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIByT), Avenida Velez Sarsfield 1611, X5016GCA, Córdoba, Argentina
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Beriotto AC, Garzón MJ, Schweigmann N. Is There a Minimum Number of Landmarks That Optimizes the Geometric Morphometric Analysis of Mosquito (Diptera, Culicidae) Wings? JOURNAL OF MEDICAL ENTOMOLOGY 2021; 58:576-587. [PMID: 33017459 DOI: 10.1093/jme/tjaa187] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Indexed: 06/11/2023]
Abstract
Culicids are the most significant arthropods affecting human health. Thus, their correct identification is critical. The use of Geometric Morphometrics (GM) has been recently incorporated into mosquito taxonomy and has begun to complement classic diagnostic techniques. Since sampling size depends on the number of Landmarks (LMs) used, this study aimed to establish the minimum number of wing LMs needed to optimize GM analysis of mosquito species and/or genera from urban and peri-urban areas of Argentina. Female left wings were used for the optimization phase, in which 17 LMs were reduced to four by iterative LM exclusion. To verify its efficiency, Principal Component Analysis (PCA), Discriminant Analysis (DA), and Canonical Variate Analysis (CVA) were performed. Additionally, a phenogram was constructed to visualize the results. We observed that five LMs for the PCA, CVA, and phenogram and nine for the DA enabled discrimination and/or clustering of almost all species and genera. Therefore, we tested the LM selection by using nine LMs and adding new species. The resulting PCA showed little overlap between species and almost all species clustered as expected, which was also reflected in the phenogram. Significant differences were found between wing shape among all species, together with a low total error rate in the DA. In conclusion, the number of LMs can be reduced and still be used to effectively differentiate and cluster culicids. This is helpful for better exploitation of available material and optimization of data processing time when classic taxonomy methods are inadequate or the material is scarce.
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Affiliation(s)
- Agustina C Beriotto
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Intendente, Güiraldes (C1428), Departamento de Ecología, Genética y Evolución, Grupo de Estudio de Mosquitos, Buenos Aires, Argentina
- Universidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA), Facultad de Ciencias Exactas y Naturales, Buenos Aires, Argentina
| | - Maximiliano J Garzón
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Intendente, Güiraldes (C1428), Departamento de Ecología, Genética y Evolución, Grupo de Estudio de Mosquitos, Buenos Aires, Argentina
- Universidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA), Facultad de Ciencias Exactas y Naturales, Buenos Aires, Argentina
| | - Nicolás Schweigmann
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Intendente, Güiraldes (C1428), Departamento de Ecología, Genética y Evolución, Grupo de Estudio de Mosquitos, Buenos Aires, Argentina
- Universidad de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Instituto de Ecología, Genética y Evolución de Buenos Aires (IEGEBA), Facultad de Ciencias Exactas y Naturales, Buenos Aires, Argentina
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Culicidae evolutionary history focusing on the Culicinae subfamily based on mitochondrial phylogenomics. Sci Rep 2020; 10:18823. [PMID: 33139764 PMCID: PMC7606482 DOI: 10.1038/s41598-020-74883-3] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Accepted: 08/21/2020] [Indexed: 01/27/2023] Open
Abstract
Mosquitoes are insects of medical importance due their role as vectors of different pathogens to humans. There is a lack of information about the evolutionary history and phylogenetic positioning of the majority of mosquito species. Here we characterized the mitogenomes of mosquito species through low-coverage whole genome sequencing and data mining. A total of 37 draft mitogenomes of different species were assembled from which 16 are newly-sequenced species. We datamined additional 49 mosquito mitogenomes, and together with our 37 mitogenomes, we reconstructed the evolutionary history of 86 species including representatives from 15 genera and 7 tribes. Our results showed that most of the species clustered in clades with other members of their own genus with exception of Aedes genus which was paraphyletic. We confirmed the monophyletic status of the Mansoniini tribe including both Coquillettidia and Mansonia genus. The Aedeomyiini and Uranotaeniini were consistently recovered as basal to other tribes in the subfamily Culicinae, although the exact relationships among these tribes differed between analyses. These results demonstrate that low-coverage sequencing is effective to recover mitogenomes, establish phylogenetic knowledge and hence generate basic fundamental information that will help in the understanding of the role of these species as pathogen vectors.
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Grech MG, Manzo LM, Epele LB, Laurito M, Claverie AÑ, Ludueña-Almeida FF, Miserendino ML, Almirón WR. Mosquito (Diptera: Culicidae) larval ecology in natural habitats in the cold temperate Patagonia region of Argentina. Parasit Vectors 2019; 12:214. [PMID: 31064397 PMCID: PMC6505294 DOI: 10.1186/s13071-019-3459-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Accepted: 04/27/2019] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Knowledge of immature habitats is an important focus for investigations of mosquito community ecology, and may improve our understanding of how environmental variables increase risk of mosquito-borne diseases by influencing the distributions and abundances of species. In Patagonia region, where climatic and ecological factors could be only borderline suitable for mosquito development, relatively little is known about larval ecology. The present study focuses on associations of environmental conditions in natural aquatic habitats with abundances of mosquito species that have colonized such habitats in Patagonia. METHODS We described the mosquito community composition within 26 natural temporary pools, and assessed the general relationships between environmental variables (pH, water temperature, conductivity, salinity, dissolved oxygen, aquatic plant cover and main nutrients) and larval abundances using redundancy analysis (RDA). Additionally, we compiled monthly climate data and vegetation indices for each larval habitat, and estimated the probability of presence for two of the most abundant species, describing through generalized linear models (GLM) the environmental, climatic and landscape variables-probability of occurrence relationships. RESULTS Seven species belonging to the genera Culex and Aedes were identified, with Culex apicinus, Cx. acharistus and Aedes albifasciatus being the most abundant. Mean larval densities were low (6.8 ± 2.8 larvae/dip), and the highest species richness and larval densities were recorded in northern and central areas. Aedes albifasciatus, a species of sanitary importance, was widely distributed, being the only one collected south of the 45th parallel of S latitude. RDA indicated that aquatic conductivity, pH, water depth, dissolved oxygen, ammonia and soluble reactive phosphorous accounted for the main part of the variation in the species composition. According to GLMs, wind speed was the variable that best described the presence of Ae. albifasciatus, and the probability of finding this species was positively associated with high wind speed values. On the other hand, the EVI vegetation index was the only variable included in the Cx. apicinus model, whereby there was a great probability of presence in arid areas with lower EVI values. CONCLUSIONS Our results enhance our knowledge of larval habitat ecology under the extreme environmental conditions of Patagonia and will guide future efforts to understand how multiple effects can affect mosquito ecology and public health at higher latitudes.
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Affiliation(s)
- Marta G. Grech
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Centro de Investigación Esquel de Montaña y Estepa Patagónica (CIEMEP), Esquel, Chubut Argentina
- Universidad Nacional de la Patagonia San Juan Bosco, Facultad de Ciencias Naturales y Ciencias de la Salud, Sede Esquel, Esquel, Chubut Argentina
| | - Luz M. Manzo
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Centro de Investigación Esquel de Montaña y Estepa Patagónica (CIEMEP), Esquel, Chubut Argentina
- Universidad Nacional de la Patagonia San Juan Bosco, Facultad de Ciencias Naturales y Ciencias de la Salud, Sede Esquel, Esquel, Chubut Argentina
| | - Luis B. Epele
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Centro de Investigación Esquel de Montaña y Estepa Patagónica (CIEMEP), Esquel, Chubut Argentina
- Universidad Nacional de la Patagonia San Juan Bosco, Facultad de Ciencias Naturales y Ciencias de la Salud, Sede Esquel, Esquel, Chubut Argentina
| | - Magdalena Laurito
- Universidad Nacional de Córdoba, Facultad de Ciencias Exactas, Físicas y Naturales, Centro de Investigaciones Entomológicas de Córdoba, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIBYT), Córdoba, Argentina
| | - Alfredo Ñ. Claverie
- Universidad Nacional de la Patagonia San Juan Bosco, Facultad de Ciencias Naturales y Ciencias de la Salud, Sede Esquel, Esquel, Chubut Argentina
| | - Francisco F. Ludueña-Almeida
- Universidad Nacional de Córdoba, Facultad de Ciencias Exactas, Físicas y Naturales, Centro de Investigaciones Entomológicas de Córdoba, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIBYT), Córdoba, Argentina
| | - María L. Miserendino
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Centro de Investigación Esquel de Montaña y Estepa Patagónica (CIEMEP), Esquel, Chubut Argentina
- Universidad Nacional de la Patagonia San Juan Bosco, Facultad de Ciencias Naturales y Ciencias de la Salud, Sede Esquel, Esquel, Chubut Argentina
| | - Walter R. Almirón
- Universidad Nacional de Córdoba, Facultad de Ciencias Exactas, Físicas y Naturales, Centro de Investigaciones Entomológicas de Córdoba, Córdoba, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, CONICET, Instituto de Investigaciones Biológicas y Tecnológicas (IIBYT), Córdoba, Argentina
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Chan‐Chable RJ, Martínez‐Arce A, Mis‐Avila PC, Ortega‐Morales AI. DNA barcodes and evidence of cryptic diversity of anthropophagous mosquitoes in Quintana Roo, Mexico. Ecol Evol 2019; 9:4692-4705. [PMID: 31031936 PMCID: PMC6476762 DOI: 10.1002/ece3.5073] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2018] [Revised: 02/11/2019] [Accepted: 02/22/2019] [Indexed: 11/08/2022] Open
Abstract
Culicidae mosquitoes are potential vectors of pathogens that affect human health. The correct species identification, as well as the discovery and description of cryptic species, is important in public health for the control and management of specific vectors. In the present study, the diversity of anthropophagous mosquitoes in Quintana Roo, at the border between Mexico and Belize, was evaluated using morphological and molecular data (COI-DNA Barcoding). A total of 1,413 adult female specimens were collected, belonging to eight genera and 31 morphospecies. Most species formed well-supported clades. Intraspecific Kimura 2 parameters (K2P) distance average was 0.75%, and a maximum distance of 4.40% was observed for Anopheles crucianss.l. ABGD method identified 28 entities, while 32 entities were identified with the BIN system. In Culex interrogator and Culex nigripalpus a low interspecific genetic distance of 0.1% was observed. One undescribed species belonging to the genus Aedes (Aedesn. sp.) was discovered, but no clear genetic divergence was found between this species and the closely related species Aedes angustivittatus. An intraspecific K2P distance greater than 2.7% was observed in Aedes serratus(3.9%), Anopheles crucianss.l. (4.4%), Culex taeniopus (3.7%), Haemagogus equinus (3.9%), Culex erraticus (5.0%), Psorophora ferox (4.5%), and in Anopheles apicimacula(8.10%); therefore, evidences of cryptic diversity are shown in these species. This study showed that DNA barcodes offer a reliable framework for mosquito species identification in Quintana Roo, except for some closely related species for which it is recommended to use additional nuclear genetic markers such as ITS2, in order to resolve these small discrepancies.
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Affiliation(s)
- Rahuel J. Chan‐Chable
- Departamento de Sistemática y Ecología AcuáticaUnidad Chetumal, El Colegio de la Frontera SurChetumalQuintana RooMéxico
| | - Arely Martínez‐Arce
- Departamento de Sistemática y Ecología AcuáticaUnidad Chetumal, El Colegio de la Frontera SurChetumalQuintana RooMéxico
| | - Pedro C. Mis‐Avila
- Departamento de Enfermedades Transmitidas por Vector y ZoonosisServicios Estatales de Salud de Quintana RooChetumalQuintana RooMéxico
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Young KI, Mundis S, Widen SG, Wood TG, Tesh RB, Cardosa J, Vasilakis N, Perera D, Hanley KA. Abundance and distribution of sylvatic dengue virus vectors in three different land cover types in Sarawak, Malaysian Borneo. Parasit Vectors 2017; 10:406. [PMID: 28859676 PMCID: PMC5580228 DOI: 10.1186/s13071-017-2341-z] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2017] [Accepted: 08/18/2017] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Mosquito-borne dengue virus (DENV) is maintained in a sylvatic, enzootic cycle of transmission between canopy-dwelling non-human primates and Aedes mosquitoes in Borneo. Sylvatic DENV can spill over into humans living in proximity to forest foci of transmission, in some cases resulting in severe dengue disease. The most likely vectors of such spillover (bridge vectors) in Borneo are Ae. albopictus and Ae. niveus. Borneo is currently experiencing extensive forest clearance. To gauge the effect of this change in forest cover on the likelihood of sylvatic DENV spillover, it is first necessary to characterize the distribution of bridge vectors in different land cover types. In the current study, we hypothesized that Ae. niveus and Ae. albopictus would show significantly different distributions in different land cover types; specifically, we predicted that Ae. niveus would be most abundant in forests whereas Ae. albopictus would have a more even distribution in the landscape. RESULTS Mosquitoes were collected from a total of 15 sites using gravid traps and a backpack aspirator around Kampong Puruh Karu, Sarawak, Malaysian Borneo, where sylvatic DENV spillover has been documented. A total of 2447 mosquitoes comprising 10 genera and 4 species of Aedes, were collected over the three years, 2013, 2014 and 2016, in the three major land cover types in the area, homestead, agriculture and forest. Mosquitoes were identified morphologically, pooled by species and gender, homogenized, and subject to DNA barcoding of each Aedes species and to arbovirus screening. As predicted, Ae. niveus was found almost exclusively in forests whereas Ae. albopictus was collected in all land cover types. Aedes albopictus was significantly (P = 0.04) more abundant in agricultural fields than forests. Sylvatic DENV was not detected in any Aedes mosquito pools, however genomes of 14 viruses were detected using next generation sequencing. CONCLUSIONS Land cover type affects the abundance and distribution of the most likely bridge vectors of sylvatic DENV in Malaysia Borneo. Conversion of forests to agriculture will likely decrease the range and abundance of Ae. niveus but enhance the abundance of Ae. albopictus.
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Affiliation(s)
- Katherine I Young
- Department of Biology, New Mexico State University, Las Cruces, NM, USA.
| | - Stephanie Mundis
- Department of Biology, New Mexico State University, Las Cruces, NM, USA
| | - Steven G Widen
- Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX, USA
| | - Thomas G Wood
- Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, TX, USA
| | - Robert B Tesh
- Department of Pathology and Center for Biodefense and Emerging Infectious Disease, Center for Tropical Diseases; Institute for Human Infections and Immunity, University of Texas Medical Branch, Galveston, TX, USA
| | | | - Nikos Vasilakis
- Department of Pathology and Center for Biodefense and Emerging Infectious Disease, Center for Tropical Diseases; Institute for Human Infections and Immunity, University of Texas Medical Branch, Galveston, TX, USA
| | - David Perera
- Institute of Health & Community Medicine, Universiti Malaysia Sarawak, Kota Samarahan, Sarawak, Malaysia
| | - Kathryn A Hanley
- Department of Biology, New Mexico State University, Las Cruces, NM, USA
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