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San Román C, Martín-Abad H, Marugán-Lobón J. A geometric morphometric protocol to correct postmortem body arching in fossil fishes. PeerJ 2024; 12:e17436. [PMID: 38832040 PMCID: PMC11146327 DOI: 10.7717/peerj.17436] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2024] [Accepted: 04/30/2024] [Indexed: 06/05/2024] Open
Abstract
Postmortem body curvature introduces error in fish morphometric data. Compared to living fish, the causes of such body curvature in fossils may be due to additive taphonomic processes that have been widely studied. However, a protocol that helps to correct its effect upon morphometric data remains unexplored. Here, we test two different mathematical approaches (multivariate regression and the so-called 'unbending functions') available to tackle fish geometric morphometric data in two exceptionally preserved gonorynchiformes fossil fishes, Rubiesichthys gregalis and Gordichthys conquensis, from the Las Hoyas deposits (Early Cretaceous, Spain). Although both methods successfully correct body curvature (i.e., removing misleading geometric variation), our results show that traditional approaches applied in living fishes might not be appropriate to fossil ones, because of the additional anatomical alterations. Namely, the best result for 2D fossil fishes is achieved by correcting the arching of the specimens (mathematically "unbending" them). Ultimately, the effect of body curvature on morphometric data is largely taxon independent and morphological diversity mitigates its effect, but size is an important factor to take into account (because larger individuals tend to be less curved).
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Affiliation(s)
- Carla San Román
- Unidad de Paleontología, Departamento de Biología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro para la Integración en Paleobiología (CIPb-UAM), Madrid, Spain
| | - Hugo Martín-Abad
- Unidad de Paleontología, Departamento de Biología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro para la Integración en Paleobiología (CIPb-UAM), Madrid, Spain
| | - Jesús Marugán-Lobón
- Unidad de Paleontología, Departamento de Biología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro para la Integración en Paleobiología (CIPb-UAM), Madrid, Spain
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2
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OUP accepted manuscript. Biol J Linn Soc Lond 2022. [DOI: 10.1093/biolinnean/blac040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
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3
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Gurgel-Lourenço RC, de S Rodrigues-Filho CA, de Oliveira Araújo PV, Sánchez-Botero JI. Phenotypic variation among silverside populations (Atherinopsidae: Atherinella brasiliensis) from distinct environments in Northeastern Brazil. ZOOLOGY 2021; 150:125981. [PMID: 34814095 DOI: 10.1016/j.zool.2021.125981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 10/31/2021] [Accepted: 11/09/2021] [Indexed: 11/16/2022]
Abstract
The successful adaptation of populations to a wide range of environments is a central topic in ecology. Based on the assumption that body shape may affect survival, we evaluated to what extent biotic and abiotic factors are capable of inducing morphological changes in Brazilian silverside populations (Atherinella brasiliensis). To reach this goal, we compared 18 morphological traits of specimens from five ecosystems representing three types of environment (estuary, coastal lagoon, reservoir). Populations from estuaries displayed greater anal fin area and greater caudal fin aspect ratio and area. Populations from coastal lagoons had more compressed bodies, larger heads, and slightly broader caudal peduncles. The fish from estuaries and coastal lagoons had longer caudal peduncles, larger pelvic fins and larger eye area. Population from reservoir had more depressed bodies and greater oral protrusion. Food availability explained 31% of the observed ecomorphological patterns. Overall, the morphology of the respective populations was consistent with each type of environment, making it possible to associate phenotypic variation with habitat and feeding patterns, although abiotic factors were more significant than biotic factors. In conclusion, landlocked populations of A. brasiliensis are sustainable and add to current knowledge of phenotypical variability in a species widely distributed along the Western Atlantic coast.
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Affiliation(s)
- Ronaldo C Gurgel-Lourenço
- Pós-graduação em Ciências Marinhas Tropicais, Instituto de Ciências do Mar - Labomar, Universidade Federal do Ceará - UFC, Av. da Abolição 3207, 60165-081, Fortaleza, CE, Brazil.
| | - Carlos A de S Rodrigues-Filho
- Pós-graduação em Ecologia, Conservação e Manejo da Vida Silvestre, Departamento de Genética, Ecologia e Evolução, Universidade Federal de Minas Gerais - UFMG, Av. Presidente Antônio Carlos 6627, 31270-910, Belo Horizonte, MG, Brazil.
| | | | - Jorge I Sánchez-Botero
- Departamento de Biologia, Campus do Pici, Universidade Federal do Ceará - UFC, 60440-900, Fortaleza, CE, Brazil.
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4
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Lorencen BM, Homola JJ, Robinson JD, Scribner KT. Quantifying nonlinear temporal effects of ethanol preservation on round goby (Neogobius melanostomus) anatomical traits. J Morphol 2021; 282:1772-1784. [PMID: 34652032 DOI: 10.1002/jmor.21420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 10/04/2021] [Accepted: 10/10/2021] [Indexed: 11/10/2022]
Abstract
Geometric morphometrics provides a powerful means of evaluating differences in phenotypic traits among specimens. However, inferences of trait variability can be confounded when measurements are based on preserved samples. We evaluated effects of ethanol preservation on morphology over a 22-week time period for a Laurentian Great Lakes invasive fish, round goby (Neogobius melanostomus, Pallas 1814), using sets of 17 lateral and six dorsal landmarks. We tested whether ethanol preservation affected the magnitude of inter-population variation between individuals collected from lake and river habitats. Generalized least square regression determined that length did not significantly vary through the preservation time series for fish from either population, while mass decreased significantly. Body shape variation was summarized using principal component analysis, which revealed that most preservation-associated changes occurred in the first 14 days. The lateral shape experienced a large magnitude change during the first 24 h in ethanol then only minor changes for the remainder of the study. The dorsal shape began to revert to pre-preservation measurements about 14 days following preservation. Additionally, differences in shape were apparent between the two populations throughout the experiment; however, the magnitude of differences between populations varied depending on whether dorsal or lateral landmarks were considered. Our study demonstrates that tissue responses to ethanol preservation can be more complex than a simple loss of mass, resulting in difficult to predict consequences for geometric morphometric analyses, including variable responses depending on the anatomical region being analyzed.
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Affiliation(s)
- Bailey M Lorencen
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, Michigan, USA
| | - Jared J Homola
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, Michigan, USA
| | - John D Robinson
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, Michigan, USA
| | - Kim T Scribner
- Department of Fisheries and Wildlife, Michigan State University, East Lansing, Michigan, USA.,Department of Integrative Biology, Michigan State University, East Lansing, Michigan, USA
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5
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Leonard KC, Worden N, Boettcher ML, Dickinson E, Hartstone-Rose A. Effects of long-term ethanol storage on muscle architecture. Anat Rec (Hoboken) 2021; 305:184-198. [PMID: 33843155 DOI: 10.1002/ar.24638] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Revised: 03/03/2021] [Accepted: 03/05/2021] [Indexed: 12/28/2022]
Abstract
Muscle excursion and force potential can be estimated from architectural variables, including mass, volume, fascicle length, and density. These have been collected from fresh specimens, preserved specimens, and sometimes mixed samples of both. However, preservation alters the gross morphology of muscles. This study aims to quantify the effects of long-term storage on myological properties across a sample of fresh and ethanol preserved Mus musculus specimens ranging in storage time from 16 to 130 years. Masses, volumes, and densities of biceps femoris, quadriceps femoris, and triceps surae were measured, and histological cross-sections of some specimens were used to evaluate the microscale effects of long-term fluid preservation. For the remainder of the sample, chemically dissected fascicle lengths were measured to evaluate the fixation effects on the linear dimensions of muscle architecture. Relative muscle mass, volume, fascicle length, average fiber area, and density, and percent fiber area were regressed against years stored in ethanol. Muscle size dropped steeply between fresh and stored samples, ultimately decreasing by 62 and 60%, respectively. These losses correlate with histologically measured shrinking of average muscle fiber area. Density of stored specimens plateaued 5% below that of fresh ones. Although muscles lost mass and volume during ethanol storage, fascicle lengths did not shorten significantly (presumably because they were preserved attached on either end to bone). This study demonstrates that muscle mass, volume, and density of specimens stored long-term in ethanol should be corrected by factors of 2.64, 2.49, and 1.054 respectively for comparability to fresh specimens.
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Affiliation(s)
- Kaitlyn C Leonard
- Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina, USA.,Department of Biological Sciences, Meredith College, Raleigh, North Carolina, USA
| | - Nikole Worden
- Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina, USA
| | - Marissa L Boettcher
- College of Medicine, Medical University of South Carolina, Charleston, South Carolina, USA
| | - Edwin Dickinson
- Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina, USA
| | - Adam Hartstone-Rose
- Department of Biological Sciences, North Carolina State University, Raleigh, North Carolina, USA
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Somniosus ( Rhinoscymnus) cheni sp. nov., A New Species of Sleeper Shark (Squaliformes: Somniosidae) from Eastern Taiwan, with Aspects of Embryo Biology. Zool Stud 2020; 59:e48. [PMID: 33335596 DOI: 10.6620/zs.2020.59-48] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Accepted: 07/28/2020] [Indexed: 11/18/2022]
Abstract
A new species of sleeper shark is described based on a 134.0 cm total length pregnant female collected from off Hualien, eastern Taiwan. The species belongs to a small species group (subgenus Rhinoscymnus) and can be distinguished from its congeners in having a smaller second dorsal fin, smaller eyes, more rows of teeth in the upper jaw and fewer in the lower jaw, and a different body proportion. Moreover, the specimen had 33 embryos, which is substantially more than the two other small species in the subgenus. Information on embryo biology are also provided.
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7
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Arendse CJ, Russell IA. Morphometric regressions for the endangered Knysna seahorse, Hippocampus capensis, in the Swartvlei Estuary from mass stranding events. KOEDOE: AFRICAN PROTECTED AREA CONSERVATION AND SCIENCE 2020. [DOI: 10.4102/koedoe.v62i1.1632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Abstract
No abstract available.
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8
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Thomas KN, Gower DJ, Bell RC, Fujita MK, Schott RK, Streicher JW. Eye size and investment in frogs and toads correlate with adult habitat, activity pattern and breeding ecology. Proc Biol Sci 2020; 287:20201393. [PMID: 32962540 PMCID: PMC7542830 DOI: 10.1098/rspb.2020.1393] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Frogs and toads (Amphibia: Anura) display diverse ecologies and behaviours, which are often correlated with visual capacity in other vertebrates. Additionally, anurans exhibit a broad range of relative eye sizes, which have not previously been linked to ecological factors in this group. We measured relative investment in eye size and corneal size for 220 species of anurans representing all 55 currently recognized families and tested whether they were correlated with six natural history traits hypothesized to be associated with the evolution of eye size. Anuran eye size was significantly correlated with habitat, with notable decreases in eye investment among fossorial, subfossorial and aquatic species. Relative eye size was also associated with mating habitat and activity pattern. Compared to other vertebrates, anurans have relatively large eyes for their body size, indicating that vision is probably of high importance. Our study reveals the role that ecology and behaviour may have played in the evolution of anuran visual systems and highlights the usefulness of museum specimens, and importance of broad taxonomic sampling, for interpreting macroecological patterns.
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Affiliation(s)
- Kate N Thomas
- Department of Life Sciences, The Natural History Museum, London SW7 5BD, UK
| | - David J Gower
- Department of Life Sciences, The Natural History Museum, London SW7 5BD, UK
| | - Rayna C Bell
- Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560-0162, USA.,Department of Herpetology, California Academy of Sciences, San Francisco, CA 94118, USA
| | - Matthew K Fujita
- Department of Biology, Amphibian and Reptile Diversity Research Center, The University of Texas at Arlington, Arlington, TX 76019, USA
| | - Ryan K Schott
- Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC 20560-0162, USA
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9
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A Morphological Method to Approximate Jumping Performance in Anurans for Macroevolutionary Studies. Evol Biol 2020. [DOI: 10.1007/s11692-020-09509-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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10
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Križek P, Mendel J, Fedorčák J, Koščo J. In the foothill zone- Sabanejewia balcanica (Karaman 1922), in the lowland zone- Sabanejewia bulgarica (Drensky, 1928): Myth or reality? Ecol Evol 2020; 10:7929-7947. [PMID: 32760575 PMCID: PMC7391564 DOI: 10.1002/ece3.6529] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Revised: 05/14/2020] [Accepted: 05/18/2020] [Indexed: 11/23/2022] Open
Abstract
The status of golden loaches (genus Sabanejewia) in the region of Central Europe and Balkans is still ambiguous. The greatest controversy is caused by species Sabanejewia balcanica and S. bulgarica. Both species are characterized by a wide spectrum of morphological variability and overlapping of distinguishing features, which then lead to difficulties in their determination. Previous phylogenetic studies aimed on the resolving of their taxonomic status did not include samples from their type localities and so led to a lack of their true distribution in this region. Therefore, the main aim of this study was to identify taxonomic status of golden loaches populations in the region of the middle Danube basin and adjacent areas on the model territory of Slovakia. For this purpose, we used novelty approach (morphological, molecular, and microhabitat) and we also included the missing samples from the type localities of both species. Based on mtDNA all the Slovakian samples reflected haplotype richness revealed on the type locality of S. bulgarica, although the genetic distances from other representatives of the genus Sabanejewia occurring are not significant. Within the morphology, we have revealed a great measure of variability in studied populations, which is largely caused by different habitat conditions and thus representing a phenotypic plasticity of these fish.
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Affiliation(s)
- Peter Križek
- Faculty of Humanities and Natural SciencesDepartment of EcologyUniversity of Prešov in PrešovPrešovSlovakia
| | - Jan Mendel
- Institute of Vertebrate BiologyCzech Academy of SciencesBrnoCzech Republic
| | - Jakub Fedorčák
- Faculty of Humanities and Natural SciencesDepartment of EcologyUniversity of Prešov in PrešovPrešovSlovakia
| | - Ján Koščo
- Faculty of Humanities and Natural SciencesDepartment of EcologyUniversity of Prešov in PrešovPrešovSlovakia
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11
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Larsen ME, Abel DC, Crane DP, Parker SL, Yancey PH, Keller BA, Grubbs DR. Unique osmoregulatory morphology in primitive sharks: an intermediate state between holocephalan and derived shark secretory morphology. JOURNAL OF FISH BIOLOGY 2019; 95:1331-1341. [PMID: 31566735 DOI: 10.1111/jfb.14139] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Accepted: 09/14/2019] [Indexed: 06/10/2023]
Abstract
Discovery of an unusual rectal gland in the Atlantic sixgill shark Hexanchus vitulus led us to examine the rectal glands of 31 species of sharks to study diversity in rectal-gland morphology. Twenty-four of 31 species of sharks had digitiform glands (mean width-length ratio ± SD = 0.17 ± 0.04) previously assumed to be characteristic of all elasmobranchs regardless of habitat depth or phylogenetic age. Rectal glands from the family Somniosidae were kidney bean-shaped (mean width: length ± SD = 0.46 ± 0.05); whereas those from families Echinorhinidae and Hexanchidae were lobulate (mean width: length ± SD = 0.55 ± 0.06). Rectal gland width: length were different among species with digitiform morphology and lobulate morphology (ANOVA; R2 = 0.9; df = 15, 386; 401, F = 219.24; P < 0.001). Histological and morphological characteristics of the digitiform morphology from deep-sea sharks were similar to those from shallow-water sharks. Histology of lobulate rectal glands from hexanchids were characterised by tubule bundles separated by smooth muscle around a central lumen. Additionally, we examined plasma chemistry of four species of sharks with digitiform rectal glands and two species with lobulate rectal-gland morphology to see if there were differences between morphologies. Plasma chemistry analysis showed that urea and trimethylamine N-oxide (TMAO) followed the piezolyte hypothesis, with TMAO being highest and urea being lowest in deep-sea sharks. Among electrolytes, Na+ was highest in species with lobulate rectal glands. Hexanchids and echinorhinids both have lobulate rectal glands similar to those of holocephalans, despite the more than 400 million years separating these two groups. The morphological similarities between the lobulate rectal-gland anatomy of primitive sharks and the secretory morphology of holocephalans may represent an intermediate state between Holocephali and derived shark species.
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Affiliation(s)
- Matthew E Larsen
- Department of Coastal and Marine Systems Science, Coastal Carolina University, Conway, South Carolina, USA
| | - Daniel C Abel
- Department of Marine Science, Coastal Carolina University, Conway, South Carolina, USA
| | - Derek P Crane
- Department of Biology, Coastal Carolina University, Conway, South Carolina, USA
| | - Scott L Parker
- Department of Biology, Coastal Carolina University, Conway, South Carolina, USA
| | - Paul H Yancey
- Department of Biology, Whitman College, Walla Walla, Washington, USA
| | - Bryan A Keller
- Coastal and Marine Laboratory, Florida State University, St. Teresa, Florida, USA
| | - Dean R Grubbs
- Coastal and Marine Laboratory, Florida State University, St. Teresa, Florida, USA
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