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Michalski J, Sommer J, Rossmanith P, Syguda A, Clapa T, Mester P. Antimicrobial and Virucidal Potential of Morpholinium-Based Ionic Liquids. Int J Mol Sci 2023; 24:ijms24021686. [PMID: 36675201 PMCID: PMC9863300 DOI: 10.3390/ijms24021686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Revised: 01/08/2023] [Accepted: 01/11/2023] [Indexed: 01/18/2023] Open
Abstract
Witnessed by the ongoing spread of antimicrobial resistant bacteria as well as the recent global pandemic of the SARS-CoV-2 virus, the development of new disinfection strategies is of great importance, and novel substance classes as effective antimicrobials and virucides are urgently needed. Ionic liquids (ILs), low-melting salts, have been already recognized as efficient antimicrobial agents with prospects for antiviral potential. In this study, we examined the antiviral activity of 12 morpholinium based herbicidal ionic liquids with a tripartite test system, including enzyme inhibition tests, virucidal activity determination against five model viruses and activity against five bacterial species. The antimicrobial and enzymatic tests confirmed that the inhibiting activity of ILs corresponds with the number of long alkyl side chains and that [Dec2Mor]+ based ILs are promising candidates as novel antimicrobials. The virucidal tests showed that ILs antiviral activity depends on the type and structure of the virus, revealing enveloped Phi6 phage as highly susceptible to the ILs action, while the non-enveloped phages PRD1 and MS2 proved completely resistant to ionic liquids. Furthermore, a comparison of results obtained for P100 and P001 phages demonstrated for the first time that the susceptibility of viruses to ionic liquids can be dependent on differences in the phage tail structure.
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Affiliation(s)
- Jakub Michalski
- Department of Biochemistry and Biotechnology, Poznań University of Life Sciences, Dojazd 11, 60-632 Poznan, Poland
| | - Julia Sommer
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Unit for Food Microbiology, Department of Veterinary Public Health and Food Science, University of Veterinary Medicine, 1210 Vienna, Austria
- Epitome GmbH, The ICON Vienna, Tower 17, Gertrude-Fröhlich-Sandner-Str. 2–4, 1100 Vienna, Austria
| | - Peter Rossmanith
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Unit for Food Microbiology, Department of Veterinary Public Health and Food Science, University of Veterinary Medicine, 1210 Vienna, Austria
- Unit of Food Microbiology, Institute of Food Safety, Food Technology and Veterinary Public Health, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210 Vienna, Austria
| | - Anna Syguda
- Department of Chemical Technology, Poznan University of Technology, Berdychowo 4, 60-965 Poznan, Poland
| | - Tomasz Clapa
- Department of Biochemistry and Biotechnology, Poznań University of Life Sciences, Dojazd 11, 60-632 Poznan, Poland
| | - Patrick Mester
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Unit for Food Microbiology, Department of Veterinary Public Health and Food Science, University of Veterinary Medicine, 1210 Vienna, Austria
- Unit of Food Microbiology, Institute of Food Safety, Food Technology and Veterinary Public Health, Department for Farm Animals and Veterinary Public Health, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210 Vienna, Austria
- Correspondence:
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Sasidharan S, Bradford SA, Šimůnek J, Kraemer SR. Virus transport from drywells under constant head conditions: A modeling study. WATER RESEARCH 2021; 197:117040. [PMID: 33774462 PMCID: PMC9126062 DOI: 10.1016/j.watres.2021.117040] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 01/24/2021] [Accepted: 03/10/2021] [Indexed: 06/10/2023]
Abstract
Many arid and semi-arid regions of the world face challenges in maintaining the water quantity and quality needs of growing populations. A drywell is an engineered vadose zone infiltration device widely used for stormwater capture and managed aquifer recharge. To our knowledge, no prior studies have quantitatively examined virus transport from a drywell, especially in the presence of subsurface heterogeneity. Axisymmetric numerical experiments were conducted to systematically study virus fate from a drywell for various virus removal and subsurface heterogeneity scenarios under steady-state flow conditions from a constant head reservoir. Subsurface domains were homogeneous or had stochastic heterogeneity with selected standard deviation (σ) of lognormal distribution in saturated hydraulic conductivity and horizontal (X) and vertical (Z) correlation lengths. Low levels of virus concentration tailing can occur even at a separation distance of 22 m from the bottom of the drywell, and 6-log10 virus removal was not achieved when a small detachment rate (kd1=1 × 10⁻⁵ min⁻¹) is present in a homogeneous domain. Improved virus removal was achieved at a depth of 22 m in the presence of horizontal lenses (e.g., X=10 m, Z=0.1 m, σ=1) that enhanced the lateral movement and distribution of the virus. In contrast, faster downward movement of the virus with an early arrival time at a depth of 22 m occurred when considering a vertical correlation in permeability (X=1 m, Z=2 m, σ=1). Therefore, the general assumption of a 1.5-12 m separation distance to protect water quality may not be adequate in some instances, and site-specific microbial risk assessment is essential to minimize risk. Microbial water quality can potentially be improved by using an in situ soil treatment with iron oxides to increase irreversible attachment and solid-phase inactivation.
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Affiliation(s)
- Salini Sasidharan
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA; United States Department of Agriculture, Agricultural Research Service, Sustainable Agricultural Water Systems Unit, Davis, CA 95616, USA.
| | - Scott A Bradford
- United States Department of Agriculture, Agricultural Research Service, Sustainable Agricultural Water Systems Unit, Davis, CA 95616, USA
| | - Jiří Šimůnek
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - Stephen R Kraemer
- U.S. Environmental Protection Agency, Office of Research and Development, San Francisco, CA 94105, USA
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Pang L, Farkas K, Lin S, Hewitt J, Premaratne A, Close M. Attenuation and transport of human enteric viruses and bacteriophage MS2 in alluvial sand and gravel aquifer media-laboratory studies. WATER RESEARCH 2021; 196:117051. [PMID: 33774351 DOI: 10.1016/j.watres.2021.117051] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2020] [Revised: 03/10/2021] [Accepted: 03/12/2021] [Indexed: 06/12/2023]
Abstract
Potable groundwater contamination by human enteric viruses poses serious health risks. Our understanding of virus subsurface transport has largely depended on studying bacteriophages as surrogates. Few studies have compared the transport behaviour of enteric viruses, especially norovirus, with phage surrogates. We conducted laboratory column experiments to investigate norovirus and bacteriophage MS2 (MS2) filtration in alluvial sand, and rotavirus, adenovirus and MS2 filtration in alluvial gravel aquifer media in 2 mM NaCl (pH 6.6-6.9) with pore velocities of 4.6-5.4 m/day. The data were analysed using colloid filtration theory and HYDRUS-1D 2-site attachment-detachment modelling. Norovirus removal was somewhat lower than MS2 removal in alluvial sand. The removal of rotavirus and adenovirus was markedly greater than MS2 removal in alluvial gravel. These findings concurred with the log10 reduction values, mass recoveries, attachment efficiencies and irreversible deposition rate constants. The modelling results suggested that the MS2 detachment rates were in the same order of magnitude as norovirus, but they were 1 order of magnitude faster than those of rotavirus and adenovirus. The attachment of viruses and MS2 was largely reversible with faster detachment than attachment rates, favouring free virus transport. These findings highlight the risk associated with continual virus transport through subsurface media if viruses are not inactivated and remobilising previously attached viruses could trigger contamination events. Thus, virus attachment reversibility should be considered in virus transport predictions in subsurface media. Further research is needed to compare surrogates with enteric viruses, especially norovirus, regarding their transport behaviours under different experimental conditions.
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Affiliation(s)
- Liping Pang
- Institute of Environmental Science & Research, Christchurch Science Centre, PO Box 29181, Christchurch 8540, New Zealand.
| | - Kata Farkas
- Institute of Environmental Science & Research, Christchurch Science Centre, PO Box 29181, Christchurch 8540, New Zealand; School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand; School of Ocean Sciences, Bangor University, Menai Bridge, Anglesey, LL59 5AB, UK
| | - Susan Lin
- Institute of Environmental Science & Research, Christchurch Science Centre, PO Box 29181, Christchurch 8540, New Zealand
| | - Joanne Hewitt
- Institute of Environmental Science & Research, Kenepuru Science Centre, PO Box 50348, Porirua, New Zealand
| | - Aruni Premaratne
- Institute of Environmental Science & Research, Christchurch Science Centre, PO Box 29181, Christchurch 8540, New Zealand
| | - Murray Close
- Institute of Environmental Science & Research, Christchurch Science Centre, PO Box 29181, Christchurch 8540, New Zealand
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Ramazanpour Esfahani A, Batelaan O, Hutson JL, Fallowfield HJ. Role of biofilm on virus inactivation in limestone aquifers: implications for managed aquifer recharge. JOURNAL OF ENVIRONMENTAL HEALTH SCIENCE & ENGINEERING 2020; 18:21-34. [PMID: 32399218 PMCID: PMC7203390 DOI: 10.1007/s40201-019-00431-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2019] [Accepted: 12/23/2019] [Indexed: 06/11/2023]
Abstract
BACKGROUND Virus, as nano-sized microorganisms are prevalent in aquifers, which threaten groundwater quality and human health wellbeing. Virus inactivation by attachment onto the limestone surfaces is a determining factor in the transport and retention behavior of virus in carbonaceous aquifers. METHODS In the present study, the inactivation of MS2 -as a model virus- by attachment onto the surfaces of limestone grains was investigated in a series of batch experiments under different conditions such as limestone particle size distribution (0.25-0.50, 0.5-1 and 1-2 mm), treated wastewater and RO water, temperature (4 and 22 °C), initial MS2 concentrations (103-107 PFU/mL) and static and dynamic conditions. The experimental data of MS2 inactivation was also fitted to a non-linear kinetic model with shoulder and tailing. The characteristics of biofilm on the surfaces of limestone aquifer materials were assessed using scanning electron microscopy (SEM) and confocal laser scanning microscopy (CLSM). RESULTS The inactivation rate of virus decreased with increasing the adsorbent diameter. Furthermore, virus inactivation was greater at room temperature (22 °C) than 4 °C, in both static and dynamic conditions. The inactivation of virus via attachment onto the limestone aquifer materials in dynamic conditions was higher than under static conditions. In addition, fitting the experimental data with a kinetic model showed that virus inactivation was high at higher temperature, smaller limestone grains and dynamic conditions. Moreover, the experiments with treated wastewater showed that in authentic aqueous media, the virus inactivation was considerably higher than in RO water, due to the presence of either monovalent or divalent cations and surface roughness created by biofilms. CONCLUSION Finally, in terms of managed aquifer recharge systems, the presence of biofilm increases bacteria and virus retention onto the aquifer surfaces. Graphical abstract.
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Affiliation(s)
- Amirhosein Ramazanpour Esfahani
- College of Science and Engineering, Flinders University, Adelaide, South Australia
- National Centre for Groundwater Research and Training, Bedford Park, SA 5001 Australia
| | - Okke Batelaan
- College of Science and Engineering, Flinders University, Adelaide, South Australia
- National Centre for Groundwater Research and Training, Bedford Park, SA 5001 Australia
| | - John L. Hutson
- College of Science and Engineering, Flinders University, Adelaide, South Australia
| | - Howard J. Fallowfield
- College of Science and Engineering, Flinders University, Adelaide, South Australia
- National Centre for Groundwater Research and Training, Bedford Park, SA 5001 Australia
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Gamazo P, Victoria M, Schijven JF, Alvareda E, Tort LFL, Ramos J, Lizasoain LA, Sapriza G, Castells M, Bessone L, Colina R. Modeling the Transport of Human Rotavirus and Norovirus in Standardized and in Natural Soil Matrix-Water Systems. FOOD AND ENVIRONMENTAL VIROLOGY 2020; 12:58-67. [PMID: 31721078 DOI: 10.1007/s12560-019-09414-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Accepted: 10/31/2019] [Indexed: 05/24/2023]
Abstract
We modeled Group A Rotavirus (RVA) and Norovirus genogroup II (GII NoV) transport experiments in standardized (crystal quartz sand and deionized water with adjusted pH and ionic strength) and natural soil matrix-water systems (MWS). On the one hand, in the standardized MWS, Rotavirus and Norovirus showed very similar breakthrough curves (BTCs), showing a removal rate of 2 and 1.7 log10, respectively. From the numerical modeling of the experiment, transport parameters of the same order of magnitude were obtained for both viruses. On the other hand, in the natural MWS, the two viruses show very different BTCs. The Norovirus transport model showed significant changes; BTC showed a removal rate of 4 log10, while Rotavirus showed a removal rate of 2.6 log10 similar to the 2 log10 observed on the standardized MWS. One possible explanation for this differential behavior is the difference in the isoelectric point value of these two viruses and the increase of the ionic strength on the natural MWS.
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Affiliation(s)
- P Gamazo
- Departamento del Agua (Water Department), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay.
| | - M Victoria
- Laboratorio de Virología Molecular, (Molecular Virology Laboratory), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - J F Schijven
- Department of Earth Sciences, Utrecht University, Budapestlaan 4, P.O. Box 80021, 3508 TA, Utrecht, The Netherlands
- Department of Statistics, Informatics and Modelling, National Institute of Public Health and the Environment (RIVM), P.O. Box 1, 3720, BA, Bilthoven, The Netherlands
| | - E Alvareda
- Departamento del Agua (Water Department), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - L F L Tort
- Laboratorio de Virología Molecular, (Molecular Virology Laboratory), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - J Ramos
- Departamento del Agua (Water Department), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - L A Lizasoain
- Laboratorio de Virología Molecular, (Molecular Virology Laboratory), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - G Sapriza
- Departamento del Agua (Water Department), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - M Castells
- Laboratorio de Virología Molecular, (Molecular Virology Laboratory), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - L Bessone
- Departamento del Agua (Water Department), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
| | - R Colina
- Laboratorio de Virología Molecular, (Molecular Virology Laboratory), CENUR LN (North Littoral Regional University Center), Universidad de la República, Gral. Rivera 1350, CP: 50.000, Salto, Uruguay
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Li X, Xu H, Gao B, Sun Y, Shi X, Wu J. Transport of a PAH-degrading bacterium in saturated limestone media under various physicochemical conditions: Common and unexpected retention and remobilization behaviors. JOURNAL OF HAZARDOUS MATERIALS 2019; 380:120858. [PMID: 31302357 DOI: 10.1016/j.jhazmat.2019.120858] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2019] [Revised: 06/04/2019] [Accepted: 07/01/2019] [Indexed: 06/10/2023]
Abstract
Laboratory saturated columns packed with granular limestone grains were used to explore the retention and remobilization of functional bacteria FA1 under various physicochemical conditions. The unique surface properties of limestone and FA1 caused some unexpected phenomena. Solution IS, cation type, temperature and surface biological property all affected FA1 retention in the columns. The IS effect was temperature dependent and initial solution pH showed little influence due to the strong buffering ability of limestone. Perturbations of solution IS caused slight release of previously retained bacteria in some columns with NaCl as the background electrolyte, while increase in flow rate caused no release at all. When CaCl2 was the background, bacterial remobilization only occurred following both cation exchange and IS reduction. DLVO forces incorporating with surface roughness calculation were determined to assist with interpretation of interaction mechanisms. All the experimental evidences suggest the importance of cation bridging, cation exchange, surface roughness, and hydrophobic interaction in controlling bacterium transport in saturated limestone porous media.
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Affiliation(s)
- Xiaohui Li
- Key Laboratory of Surficial Geochemistry of Ministry of Education, School of Earth Sciences and Engineering, Hydrosciences Department, Nanjing University, Nanjing 210023, China
| | - Hongxia Xu
- Key Laboratory of Surficial Geochemistry of Ministry of Education, School of Earth Sciences and Engineering, Hydrosciences Department, Nanjing University, Nanjing 210023, China.
| | - Bin Gao
- Department of Agricultural and Biological Engineering, University of Florida, Gainesville, FL, 32611, USA
| | - Yuanyuan Sun
- Key Laboratory of Surficial Geochemistry of Ministry of Education, School of Earth Sciences and Engineering, Hydrosciences Department, Nanjing University, Nanjing 210023, China
| | - Xiaoqing Shi
- Key Laboratory of Surficial Geochemistry of Ministry of Education, School of Earth Sciences and Engineering, Hydrosciences Department, Nanjing University, Nanjing 210023, China
| | - Jichun Wu
- Key Laboratory of Surficial Geochemistry of Ministry of Education, School of Earth Sciences and Engineering, Hydrosciences Department, Nanjing University, Nanjing 210023, China.
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Sommer J, Trautner C, Witte AK, Fister S, Schoder D, Rossmanith P, Mester PJ. Don't Shut the Stable Door after the Phage Has Bolted-The Importance of Bacteriophage Inactivation in Food Environments. Viruses 2019; 11:E468. [PMID: 31121941 PMCID: PMC6563225 DOI: 10.3390/v11050468] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2019] [Revised: 05/05/2019] [Accepted: 05/17/2019] [Indexed: 12/11/2022] Open
Abstract
In recent years, a new potential measure against foodborne pathogenic bacteria was rediscovered-bacteriophages. However, despite all their advantages, in connection to their widespread application in the food industry, negative consequences such as an uncontrolled phage spread as well as a development of phage resistant bacteria can occur. These problems are mostly a result of long-term persistence of phages in the food production environment. As this topic has been neglected so far, this article reviews the current knowledge regarding the effectiveness of disinfectant strategies for phage inactivation and removal. For this purpose, the main commercial phage products, as well as their application fields are first discussed in terms of applicable inactivation strategies and legal regulations. Secondly, an overview of the effectiveness of disinfectants for bacteriophage inactivation in general and commercial phages in particular is given. Finally, this review outlines a possible strategy for users of commercial phage products in order to improve the effectiveness of phage inactivation and removal after application.
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Affiliation(s)
- Julia Sommer
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
| | - Christoph Trautner
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
| | - Anna Kristina Witte
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
- HTK Hygiene Technologie Kompetenzzentrum GmbH, Buger Str. 80, 96049 Bamberg, Germany.
| | - Susanne Fister
- Former member of Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Institute of Milk Hygiene, Milk Technology and Food Science, Department for Farm Animal and Public Veterinary Health, University of Veterinary Medicine, Veterinärplatz 1, 1210 Vienna, Austria.
| | - Dagmar Schoder
- Unit of Food Microbiology, Institute of Food Safety, Food Technology and Veterinary Public Health, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
| | - Peter Rossmanith
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
- Unit of Food Microbiology, Institute of Food Safety, Food Technology and Veterinary Public Health, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
| | - Patrick-Julian Mester
- Christian Doppler Laboratory for Monitoring of Microbial Contaminants, Department for Farm Animal and Public Health in Veterinary Medicine, University of Veterinary Medicine, Veterinaerplatz 1, 1210 Vienna, Austria.
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Stadler P, Blöschl G, Nemeth L, Oismüller M, Kumpan M, Krampe J, Farnleitner AH, Zessner M. Event-transport of beta-d-glucuronidase in an agricultural headwater stream: Assessment of seasonal patterns by on-line enzymatic activity measurements and environmental isotopes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 662:236-245. [PMID: 30690358 DOI: 10.1016/j.scitotenv.2019.01.143] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Revised: 01/09/2019] [Accepted: 01/13/2019] [Indexed: 06/09/2023]
Abstract
Understanding the fate of fecal pollution in the landscape is required for microbial risk analysis. The aim of this study was to assess the patterns and dynamics of beta-d-glucuronidase (GLUC), which has been suggested as a surrogate for fecal pollution monitoring, in a stream draining an agricultural headwater catchment. Automated enzymatic on-site measurements of stream water and sediments were made over two years (2014-2016) to quantify the sources and pathways of GLUC in a stream. The event water fraction of streamflow was estimated by stable isotopes. Samples from field sediments on a hillslope, streambed sediment and stream water were analyzed for GLUC and with a standard E. coli assay. The results showed ten times higher GLUC and E. coli concentrations during the summer than during the winter for all compartments (field and streambed sediments and stream water). The E. coli concentrations in the streambed sediment were approximately 100 times those of the field sediments. Of the total GLUC load in the study period, 39% were transported during hydrological events (increased streamflow due to rainfall or snowmelt); of these, 44% were transported when the stream contained no recent rainwater. The results suggested that a large proportion of the GLUC and E. coli in the stream water stemmed from resuspended streambed sediments. Moreover, the results strongly indicated the existence of remnant populations of GLUC-active organisms in the catchment.
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Affiliation(s)
- Philipp Stadler
- Institute for Water Quality and Resource Management, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria; Centre for Water Resource Systems, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria.
| | - Günter Blöschl
- Centre for Water Resource Systems, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria; Institute of Hydraulic Engineering and Water Resources Management, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Lukas Nemeth
- Institute for Water Quality and Resource Management, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Markus Oismüller
- Centre for Water Resource Systems, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Monika Kumpan
- Institute for Land & Water Management Research, Federal Agency for Water Management, A-3252 Petzenkirchen, Austria
| | - Jörg Krampe
- Institute for Water Quality and Resource Management, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
| | - Andreas H Farnleitner
- Centre for Water Resource Systems, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria; Division Water Quality and Health, Karl Landsteiner University of Health Sciences, A-3500 Krems a. d. Donau, Austria; Institute of Chemical and Bioscience Engineering, ICC Water and Health, Research Group 166/5/3TU Wien, Gumpendorferstraße 1a, A-1060 Vienna, Austria
| | - Matthias Zessner
- Institute for Water Quality and Resource Management, TU Wien, Karlsplatz 13, A-1040 Vienna, Austria
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Fauvel B, Cauchie HM, Gantzer C, Ogorzaly L. Influence of physico-chemical characteristics of sediment on the in situ spatial distribution of F-specific RNA phages in the riverbed. FEMS Microbiol Ecol 2019; 95:5289377. [PMID: 30649274 PMCID: PMC6333113 DOI: 10.1093/femsec/fiy240] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2018] [Accepted: 01/11/2019] [Indexed: 11/30/2022] Open
Abstract
Riverbed sediment is commonly described as an enteric virus reservoir and thought to play an important role in water column contamination, especially during rainfall events. Although the occurrence and fate of faecal-derived viruses are fairly well characterized in water, little information is available on their presence as their interactions with sediment. This study aimed at determining the main environmental factors responsible for the presence of enteric viruses in riverbed sediment. Using a combination of microbiological and physico-chemical analyses of freshly field-sampled sediments, we demonstrated their contamination by faecal phages. The in situ spatial distribution of phages in sediment was mainly driven by sediment composition. A preferential phage accumulation occurred along one bank of the river, where the quantity of fine sands and clay particles smaller than 0.2 mm was the highest. Additionally, a mineralogical analysis revealed the influence of the heterogeneous presence of virus sorbents such as quartz, calcite, carbonates and iron-bearing phases (goethite) on the phage spatial pattern. A more precise knowledge of the composition of riverbed sediment is therefore useful for predicting preferential areas of enteric virus accumulation and should allow more accurate microbial risk assessment when using surface water for drinking water production or recreational activities.
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Affiliation(s)
- Blandine Fauvel
- Luxembourg Institute of Science and Technology (LIST), Department of Environmental Research and Innovation (ERIN), 5 Avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, LUXEMBOURG.,Université de Lorraine, Laboratoire de Chimie, Physique et Microbiologie pour les Matériaux et l'Environnement (LCPME), UMR 7564, Faculté de Pharmacie, 5 Rue Albert Lebrun BP 80403 54001 Nancy, FRANCE.,CNRS, LCPME, UMR 7564, Nancy F-54000, France
| | - Henry-Michel Cauchie
- Luxembourg Institute of Science and Technology (LIST), Department of Environmental Research and Innovation (ERIN), 5 Avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, LUXEMBOURG
| | - Christophe Gantzer
- Université de Lorraine, Laboratoire de Chimie, Physique et Microbiologie pour les Matériaux et l'Environnement (LCPME), UMR 7564, Faculté de Pharmacie, 5 Rue Albert Lebrun BP 80403 54001 Nancy, FRANCE.,CNRS, LCPME, UMR 7564, Nancy F-54000, France
| | - Leslie Ogorzaly
- Luxembourg Institute of Science and Technology (LIST), Department of Environmental Research and Innovation (ERIN), 5 Avenue des Hauts-Fourneaux, 4362 Esch-sur-Alzette, LUXEMBOURG
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Transfer of Enteric Viruses Adenovirus and Coxsackievirus and Bacteriophage MS2 from Liquid to Human Skin. Appl Environ Microbiol 2018; 84:AEM.01809-18. [PMID: 30217840 PMCID: PMC6210118 DOI: 10.1128/aem.01809-18] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Accepted: 09/05/2018] [Indexed: 11/23/2022] Open
Abstract
Enteric viruses (viruses that infect the gastrointestinal tract) are responsible for most water-transmitted diseases. They are shed in high concentrations in the feces of infected individuals, persist for an extended period of time in water, and are highly infective. Exposure to contaminated water directly (through ingestion) or indirectly (for example, through hand-water contacts followed by hand-to-mouth contacts) increases the risk of virus transmission. The work described herein provides a quantitative model for estimating human-pathogenic virus retention on skin following contact with contaminated water. The work will be important in refining the contribution of indirect transmission of virus to risks associated with water-related activities. Indirect exposure to waterborne viruses increases the risk of infection, especially among children with frequent hand-to-mouth contacts. Here, we quantified the transfer of one bacteriophage (MS2) and two enteric viruses (adenovirus and coxsackievirus) from liquid to skin. MS2, a commonly used enteric virus surrogate, was used to compare virus transfer rates in a volunteer trial to those obtained using human cadaver skin and synthetic skin. MS2 transfer to volunteer skin was similar to transfer to cadaver skin but significantly different from transfer to synthetic skin. The transfer of MS2, adenovirus, and coxsackievirus to cadaver skin was modeled using measurements for viruses attaching to the skin (adsorbed) and viruses in liquid residual on skin (unadsorbed). We find virus transfer per surface area is a function of the concentration of virus in the liquid and the film thickness of liquid retained on the skin and is estimable using a linear model. Notably, the amount of MS2 adsorbed on the skin was on average 5 times higher than the amount of adenovirus and 4 times higher than the amount of coxsackievirus. Quantification of pathogenic virus retention to skin would thus be overestimated using MS2 adsorption data. This study provides models of virus transfer useful for risk assessments of water-related activities, demonstrates significant differences in the transfer of pathogenic virus and MS2, and suggests cadaver skin as an alternative testing system for studying interactions between viruses and skin. IMPORTANCE Enteric viruses (viruses that infect the gastrointestinal tract) are responsible for most water-transmitted diseases. They are shed in high concentrations in the feces of infected individuals, persist for an extended period of time in water, and are highly infective. Exposure to contaminated water directly (through ingestion) or indirectly (for example, through hand-water contacts followed by hand-to-mouth contacts) increases the risk of virus transmission. The work described herein provides a quantitative model for estimating human-pathogenic virus retention on skin following contact with contaminated water. The work will be important in refining the contribution of indirect transmission of virus to risks associated with water-related activities.
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Feichtmayer J, Deng L, Griebler C. Antagonistic Microbial Interactions: Contributions and Potential Applications for Controlling Pathogens in the Aquatic Systems. Front Microbiol 2017; 8:2192. [PMID: 29184541 PMCID: PMC5694486 DOI: 10.3389/fmicb.2017.02192] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2017] [Accepted: 10/25/2017] [Indexed: 12/21/2022] Open
Abstract
Despite the active and intense treatment of wastewater, pathogenic microorganisms and viruses are frequently introduced into the aquatic environment. For most human pathogens, however, this is a rather hostile place, where starvation, continuous inactivation, and decay generally occur, rather than successful reproduction. Nevertheless, a great diversity of the pathogenic microorganisms can be detected, in particular, in the surface waters receiving wastewater. Pathogen survival depends majorly on abiotic factors such as irradiation, changes in water ionic strength, temperature, and redox state. In addition, inactivation is enhanced by the biotic interactions in the environment. Although knowledge of the antagonistic biotic interactions has been available since a long time, certain underlying processes and mechanisms still remain unclear. Others are well-appreciated and increasingly are applied to the present research. Our review compiles and discusses the presently known biotic interactions between autochthonous microbes and pathogens introduced into the aquatic environment, including protozoan grazing, virus-induced bacterial cell lysis, antimicrobial substances, and predatory bacteria. An overview is provided on the present knowledge, as well as on the obvious research gaps. Individual processes that appear promising for future applications in the aquatic environment are presented and discussed.
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Affiliation(s)
- Judith Feichtmayer
- Institute of Groundwater Ecology, Helmholtz Zentrum München GmbH, Neuherberg, Germany
| | - Li Deng
- Institute of Groundwater Ecology, Helmholtz Zentrum München GmbH, Neuherberg, Germany
- Institute of Virology, Helmholtz Zentrum München GmbH, Neuherberg, Germany
| | - Christian Griebler
- Institute of Groundwater Ecology, Helmholtz Zentrum München GmbH, Neuherberg, Germany
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Wong K, Molina M. Applying Quantitative Molecular Tools for Virus Transport Studies: Opportunities and Challenges. GROUND WATER 2017; 55:778-783. [PMID: 28542984 PMCID: PMC6146963 DOI: 10.1111/gwat.12531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2016] [Revised: 04/02/2017] [Accepted: 04/05/2017] [Indexed: 05/31/2023]
Abstract
Bacteriophages have been used in soil column studies for the last several decades as surrogates to study the fate and transport behavior of enteric viruses in groundwater. However, recent studies have shown that the transport behavior of bacteriophages and enteric viruses in porous media can be very different. The next generation of virus transport science must therefore provide more data on mobility of enteric viruses and the relationship between transport behaviors of enteric viruses and bacteriophages. To achieve this new paradigm, labor intensity devoted to enteric virus quantification method must be reduced. Recent studies applied quantitative polymerase chain reaction (qPCR) to column filtration experiments to study the transport behavior of human adenovirus (HAdV) in porous media under a variety of conditions. A similar approach can be used to study the transport of other enteric viruses such as norovirus. Analyzing the column samples with both qPCR and culture assays and applying multiplex qPCR to study cotransport behavior of more than one virus will provide information to under-explored areas in virus transport science. Both nucleic acid extraction kits and one-step lysis protocols have been used in these column studies to extract viral nucleic acid for qPCR quantification. The pros and cons of both methods are compared herein and solutions for overcoming problems are suggested. As better understanding of the transport behavior of enteric viruses is clearly needed, we strongly advocate for application of rapid molecular tools in future studies as well as optimization of protocols to overcome their current limitations.
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Affiliation(s)
- Kelvin Wong
- Ecosystem Research Division, USEPA Office of Research and Development, National Exposure Research Laboratory, 960 College Station Road, Athens, GA, 30605
- Oak Ridge Institute for Science and Education, 1299 Bethel Valley Road, Oak Ridge, TN, 37831
| | - Marirosa Molina
- Ecosystem Research Division, USEPA Office of Research and Development, National Exposure Research Laboratory, 960 College Station Road, Athens, GA, 30605
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Ghanem N, Kiesel B, Kallies R, Harms H, Chatzinotas A, Wick LY. Marine Phages As Tracers: Effects of Size, Morphology, and Physico-Chemical Surface Properties on Transport in a Porous Medium. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2016; 50:12816-12824. [PMID: 27715020 DOI: 10.1021/acs.est.6b04236] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Although several studies examined the transport of viruses in terrestrial systems only few studies exist on the use of marine phages (i.e., nonterrestrial viruses infecting marine host bacteria) as sensitively detectable microbial tracers for subsurface colloid transport and water flow. Here, we systematically quantified and compared for the first time the effects of size, morphology and physicochemical surface properties of six marine phages and two coliphages (MS2, T4) on transport in sand-filled percolated columns. Phage-sand interactions were described by colloidal filtration theory and the extended Derjaguin-Landau-Verwey-Overbeek approach (XDLVO), respectively. The phages belonged to different families and comprised four phages never used in transport studies (i.e., PSA-HM1, PSA-HP1, PSA-HS2, and H3/49). Phage transport was influenced by size, morphology and hydrophobicity in an approximate order of size > hydrophobicity ≥ morphology. Two phages PSA-HP1, PSA-HS2 (Podoviridae and Siphoviridae) exhibited similar mass recovery as commonly used coliphage MS2 and were 7-fold better transported than known marine phage vB_PSPS-H40/1. Differing properties of the marine phages may be used to trace transport of indigenous viruses, natural colloids or anthropogenic nanomaterials and, hence, contribute to better risk analysis. Our results underpin the potential role of marine phages as microbial tracer for transport of colloidal particles and water flow.
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Affiliation(s)
- Nawras Ghanem
- Helmholtz Centre for Environmental Research - UFZ , Department of Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany
| | - Bärbel Kiesel
- Helmholtz Centre for Environmental Research - UFZ , Department of Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany
| | - René Kallies
- Helmholtz Centre for Environmental Research - UFZ , Department of Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany
| | - Hauke Harms
- Helmholtz Centre for Environmental Research - UFZ , Department of Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
| | - Antonis Chatzinotas
- Helmholtz Centre for Environmental Research - UFZ , Department of Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
| | - Lukas Y Wick
- Helmholtz Centre for Environmental Research - UFZ , Department of Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany
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Bradford SA, Schijven J, Harter T. Microbial Transport and Fate in the Subsurface Environment: Introduction to the Special Section. JOURNAL OF ENVIRONMENTAL QUALITY 2015; 44:1333-1337. [PMID: 26436251 DOI: 10.2134/jeq2015.07.0375] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Microorganisms constitute an almost exclusive form of life in the earth's subsurface environment (not including caves), particularly at depths exceeding the soil horizon. While of broad interest to ecology and geology, scientific interest in the fate and transport of microorganisms, particularly those introduced through the anthropogenic environment, has focused on understanding the subsurface environment as a pathway for human pathogens and on optimizing the use of microbial organisms for remediation of potable groundwater. This special section, inspired by the 2014 Ninth International Symposium for Subsurface Microbiology, brings together recent efforts to better understand the spatiotemporal occurrence of anthropogenic microbial groundwater contamination and the fate and transport of microbes in the subsurface environment: in soils, deep unsaturated zones, and within aquifer systems. Work includes field reconnaissance, controlled laboratory studies to improve our understanding of specific fate and transport processes, and the development and application of improved mechanistic understanding of microbial fate and transport processes in the subsurface environment. The findings confirm and also challenge the limitations of our current understanding of highly complex microbial fate and transport processes across spatiotemporal scales in the subsurface environment; they also add to the increasing knowledge base to improve our ability to protect drinking water resources and perform in situ environmental remediation.
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