The Ecology of Acidophilic Microorganisms in the Corroding Concrete Sewer Environment

Bio-corrosion in concrete sewer systems: Mechanisms and mitigation strategies

The deterioration of concrete sewer structures due to bio-corrosion presents critical and escalating challenges from structural, economic and environmental perspectives. Despite decades of research, this issue remains inadequately addressed, resulting in billions of dollars in maintenance costs and a shortened service life for sewer infrastructure worldwide. This challenge is exacerbated by the absence of standardized test methods and universally accepted mitigation strategies, leaving industries and stakeholders confronting an increasingly pressing problem. This paper aims to bridge this knowledge gap by providing a comprehensive review of the complex mechanisms of bio-corrosion, focusing on the formation and accumulation of hydrogen sulfide, its conversion into sulfuric acid and the subsequent deterioration of concrete materials. The paper also explores various factors affecting bio-corrosion rates, including environmental conditions, concrete properties and wastewater characteristics. The paper further highlights existing corrosion test strategies, such as chemical tests, in-situ tests and microbial simulations tests along with their general analytical parameters. The conversion of hydrogen sulfide into sulfuric acid is a primary cause of concrete decay and its progression is influenced by environmental conditions, inherent concrete characteristics, and the composition of wastewater. Through illustrative case studies, the paper assesses the practical implications and efficacy of prevailing mitigation techniques. Coating materials provide a protective barrier against corrosive agents among the discussed techniques, while optimised concrete mix designs enhance the inherent resistance and durability of the concrete matrix. Finally, this review also outlines the future prospects and challenges in bio-corrosion research with an aim to promote the creation of more resilient and cost-efficient materials for sewer systems.

Methylacidiphilum caldifontis gen. nov., sp. nov., a thermoacidophilic methane-oxidizing bacterium from an acidic geothermal environment, and descriptions of the family Methylacidiphilaceae fam. nov. and order Methylacidiphilales ord. nov

Strain IT6T, a thermoacidophilic and facultative methane-oxidizing bacterium, was isolated from a mud-water mixture collected from Pisciarelli hot spring in Pozzuoli, Italy. The novel strain is white when grown in liquid or solid media and forms Gram-negative rod-shaped, non-flagellated, non-motile cells. It conserves energy by aerobically oxidizing methane and hydrogen while deriving carbon from carbon dioxide fixation. Strain IT6T had three complete pmoCAB operons encoding particulate methane monooxygenase and genes encoding group 1d and 3b [NiFe] hydrogenases. Simple carbon-carbon substrates such as ethanol, 2-propanol, acetone, acetol and propane-1,2-diol were used as alternative electron donors and carbon sources. Optimal growth occurred at 50-55°C and between pH 2.0-3.0. The major fatty acids were C18 : 0, C15 : 0 anteiso, C14 : 0 iso, C16 : 0 and C14 : 0, and the main polar lipids were phosphatidylethanolamine, aminophospholipid, phosphatidylglycerol, diphosphatidylglycerol, some unidentified phospholipids and glycolipids, and other unknown polar lipids. Strain IT6T has a genome size of 2.19 Mbp and a G+C content of 40.70 mol%. Relative evolutionary divergence using 120 conserved single-copy marker genes (bac120) and phylogenetic analyses based on bac120 and 16S rRNA gene sequences showed that strain IT6T is affiliated with members of the proposed order 'Methylacidiphilales' of the class Verrucomicrobiia in the phylum Verrucomicrobiota. It shared a 16S rRNA gene sequence identity of >96 % with cultivated isolates in the genus 'Methylacidiphilum' of the family 'Methylacidiphilaceae', which are thermoacidophilic methane-oxidizing bacteria. 'Methylacidiphilum sp.' Phi (100 %), 'Methylacidiphilum infernorum' V4 (99.02 %) and 'Methylacidiphilum sp.' RTK17.1 (99.02 %) were its closest relatives. Its physiological and genomic properties were consistent with those of other isolated 'Methylacidiphilum' species. Based on these results, we propose the name Methylacidiphilum caldifontis gen. nov., sp. nov. to accommodate strain IT6T (=KCTC 92103T=JCM 39288T). We also formally propose that the names Methylacidiphilaceae fam. nov. and Methylacidiphilales ord. nov. to accommodate the genus Methylacidiphilum gen. nov.

Review on Microbially Influenced Concrete Corrosion

Microbially influenced concrete corrosion (MICC) causes substantial financial losses to modern societies. Concrete corrosion with various environmental factors has been studied extensively over several decades. With the enhancement of public awareness on the environmental and economic impacts of microbial corrosion, MICC draws increasingly public attention. In this review, the roles of various microbial communities on MICC and corresponding protective measures against MICC are described. Also, the current status and research methodology of MICC are discussed. Thus, this review aims at providing insight into MICC and its mechanisms as well as the development of protection possibilities.

A critical review of chemical uses in urban sewer systems

Chemical dosing is the most used strategy for sulfide and methane abatement in urban sewer systems. Although conventional physicochemical methods, such as sulfide oxidation (e.g., oxygen/nitrate), precipitation (e.g., iron salts), and pH elevation (e.g., magnesium hydroxide/sodium hydroxide) have been used since the last century, the high chemical cost, large environmental footprint, and side-effects on downstream treatment processes demand a sustainable and cost-effective alternative to these approaches. In this paper, we aimed to review the currently used chemicals and significant progress made in sustainable sulfide and methane abatement technology, including 1) the use of bio-inhibitors, 2) in situ chemical production, and 3) an effective dosing strategy. To enhance the cost-effectiveness of chemical applications in urban sewer systems, two research directions have emerged: 1) online control and optimization of chemical dosing strategies and 2) integrated use of chemicals in urban sewer and wastewater treatment systems. The integration of these approaches offers considerable system-wide benefits; however, further development and comprehensive studies are required.

Hydrogen sulfide control in sewer systems: A critical review of recent progress

In sewer systems where anaerobic conditions are present, sulfate-reducing bacteria reduce sulfate to hydrogen sulfide (H₂S), leading to sewer corrosion and odor emission. Various sulfide/corrosion control strategies have been proposed, demonstrated, and optimized in the past decades. These included (1) chemical addition to sewage to reduce sulfide formation, to remove dissolved sulfide after its formation, or to reduce H₂S emission from sewage to sewer air, (2) ventilation to reduce the H₂S and humidity levels in sewer air, and (3) amendments of pipe materials/surfaces to retard corrosion. This work aims to comprehensively review both the commonly used sulfide control measures and the emerging technologies, and to shed light on their underlying mechanisms. The optimal use of the above-stated strategies is also analyzed and discussed in depth. The key knowledge gaps and major challenges associated with these control strategies are identified and strategies dealing with these gaps and challenges are recommended. Finally, we emphasize a holistic approach to sulfide control by managing sewer networks as an integral part of an urban water system.

Current overview and future perspective in fungal biorecovery of metals from secondary sources

Microorganisms are intimately involved in many biogeochemical processes that underpin the transformation of metals and cycling of related substances, such as metalloids and radionuclides. Many processes determine the mobility and bioavailability of metals, thereby influencing their transfer to the environment and living organisms. These processes are closely related to global phenomena such as soil formation and bioweathering. In addition to environmental significance, microbial metal transformations play an essential role in both in situ and ex situ bioremediation processes for solid and liquid wastes. The solubilization of heavy metals from industrial waste and soil is commonly used in bioremediation. Moreover, immobilization processes are applicable to bioremediation of metals and radionuclides from aqueous solutions. This review provides an overview of critical metal extraction and recovery from secondary sources, applied microorganisms and methods, metal-microbe interactions, as well as a detailed description of known metal recovery mechanisms.

A Metagenomic Investigation of Spatial and Temporal Changes in Sewage Microbiomes across a University Campus

Wastewater microbial communities are not static and can vary significantly across time and space, but this variation and the factors driving the observed spatiotemporal variation often remain undetermined. We used a shotgun metagenomic approach to investigate changes in wastewater microbial communities across 17 locations in a sewer network, with samples collected from each location over a 3-week period. Fecal material-derived bacteria constituted a relatively small fraction of the taxa found in the collected samples, highlighting the importance of environmental sources to the sewage microbiome. The prokaryotic communities were highly variable in composition depending on the location within the sampling network, and this spatial variation was most strongly associated with location-specific differences in sewage pH. However, we also observed substantial temporal variation in the composition of the prokaryotic communities at individual locations. This temporal variation was asynchronous across sampling locations, emphasizing the importance of independently considering both spatial and temporal variation when assessing the wastewater microbiome. The spatiotemporal patterns in viral community composition closely tracked those of the prokaryotic communities, allowing us to putatively identify the bacterial hosts of some of the dominant viruses in these systems. Finally, we found that antibiotic resistance gene profiles also exhibit a high degree of spatiotemporal variability, with most of these genes unlikely to be derived from fecal bacteria. Together, these results emphasize the dynamic nature of the wastewater microbiome, the challenges associated with studying these systems, and the utility of metagenomic approaches for building a multifaceted understanding of these microbial communities and their functional attributes. IMPORTANCE Sewage systems harbor extensive microbial diversity, including microbes derived from both human and environmental sources. Studies of the sewage microbiome are useful for monitoring public health and the health of our infrastructure, but the sewage microbiome can be highly variable in ways that are often unresolved. We sequenced DNA recovered from wastewater samples collected over a 3-week period at 17 locations in a single sewer system to determine how these communities vary across time and space. Most of the wastewater bacteria, and the antibiotic resistance genes they harbor, were not derived from human feces, but human usage patterns did impact how the amounts and types of bacteria and bacterial genes we found in these systems varied over time. Likewise, the wastewater communities, including both bacteria and their viruses, varied depending on location within the sewage network, highlighting the challenges and opportunities in efforts to monitor and understand the sewage microbiome.

Comparison of bacterial communities on the surface of concrete breakwater structures and ambient bacterioplankton

Breakwater structures made of concrete are used widely around the world, and the bacteria living on these surfaces can cause the concrete to deteriorate. In this study, we collected bacterial biofilms from concrete breakwater structures located along the coast of an island, a mainland coast, and a freshwater riverbank as well as planktonic water samples from each site, and we analyzed their bacterial community structures using Illumina sequencing. At the phylum level, Proteobacteria and Actinobacteria dominated planktonic samples, whereas Cyanobacteria, Proteobacteria, and Bacteroidetes dominated the biofilm samples. High Cyanobacteria abundance was found in all biofilm samples. Bacterial communities significantly varied between planktonic and biofilm samples and between biofilm samples from seawater and freshwater. Only a small number of bacterial operational taxonomic units were shared by planktonic and biofilm samples from each sampling site. The permanganate index in ambient water had a more significant impact on biofilm bacterial communities than on planktonic samples. Additionally, ammonia nitrogen and total nitrogen contents were positively correlated and salinity was negatively correlated with bacterial beta diversity in biofilm samples.

Microbiologically Induced Concrete Corrosion: A Concise Review of Assessment Methods, Effects, and Corrosion-Resistant Coating Materials

Microbiologically induced concrete corrosion (in wastewater pipes) occurs mainly because of the diffusion of aggressive solutions and in situ production of sulfuric acid by microorganisms. The prevention of concrete biocorrosion usually requires modification of the mix design or the application of corrosion-resistant coatings, which requires a fundamental understanding of the corrosion process. In this regard, a state-of-the-art review on the subject is presented in this paper, which firstly details the mechanism of microbial deterioration, followed by assessment methods to characterize biocorrosion and its effects on concrete properties. Different types of corrosion-resistant coatings are also reviewed to prevent biocorrosion in concrete sewer and waste-water pipes. At the end, concluding remarks, research gaps, and future needs are discussed, which will help to overcome the challenges and possible environmental risks associated with biocorrosion.

Enhanced decay of coronaviruses in sewers with domestic wastewater

Recent outbreaks caused by coronaviruses and their supposed potential fecal-oral transmission highlight the need for understanding the survival of infectious coronavirus in domestic sewers. To date, the survivability and decay of coronaviruses were predominately studied using small volumes of wastewater (normally 5-30 mL) in vials (in-vial tests). However, real sewers are more complicated than bulk wastewater (wastewater matrix only), in particular the presence of sewer biofilms and different operational conditions. This study investigated the decay of infectious human coronavirus 229E (HCoV-229E) and feline infectious peritonitis virus (FIPV), two typical surrogate coronaviruses, in laboratory-scale reactors mimicking the gravity (GS, gravity-driven sewers) and rising main sewers (RM, pressurized sewers) with and without sewer biofilms. The in-sewer decay of both coronaviruses was greatly enhanced in comparison to those reported in bulk wastewater through in-vial tests. 99% of HCoV-229E and FIPV decayed within 2 h under either GS or RM conditions with biofilms, in contrast to 6-10 h without biofilms. There is limited difference in the decay of HCoV and FIPV in reactors operated as RM or GS, with the T90 and T99 difference of 7-10 min and 14-20 min, respectively. The decay of both coronaviruses in sewer biofilm reactors can be simulated by biphasic first-order kinetic models, with the first-order rate constant 2-4 times higher during the first phase than the second phase. The decay of infectious HCoV and FIPV was significantly faster in the reactors with sewer biofilms than in the reactors without biofilms, suggesting an enhanced decay of these surrogate viruses due to the presence of biofilms and related processes. The mechanism of biofilms in virus adsorption and potential inactivation remains unclear and requires future investigations. The results indicate that the survivability of infectious coronaviruses detected using bulk wastewater overestimated the infectivity risk of coronavirus during wastewater transportations in sewers or the downstream treatment.

Corrosion mitigation by nitrite spray on corroded concrete in a real sewer system

Microbially influenced concrete corrosion (MICC) in sewers is caused by the activity of sulfide-oxidizing microorganisms (SOMs) on concrete surfaces, which greatly deteriorates the integrity of sewers. Surface treatment of corroded concrete by spraying chemicals is a low-cost and non-intrusive strategy. This study systematically evaluated the spray of nitrite solution in corrosion mitigation and re-establishment in a real sewer manhole. Two types of concrete were exposed at three heights within the sewer manhole for 21 months. Nitrite spray was applied at the 6th month for half of the coupons which had developed active corrosion. The corrosion development was monitored by measuring the surface pH, corrosion product composition, sulfide uptake rate, concrete corrosion loss, and the microbial community on the corrosion layer. Free nitrous acid (FNA, i.e. HNO₂), formed by spraying a nitrite solution on acidic corrosion surfaces, was shown to inhibit the activity of SOMs. The nitrite spray reduced the corrosion loss of concrete at all heights by 40-90% for six months. The sulfide uptake rate of sprayed coupons was also reduced by about 35%, leading to 1-2 units higher surface pH, comparing to the control coupons. The microbial community analysis revealed a reduced abundance of SOMs on nitrite sprayed coupons. The long-term monitoring also showed that the corrosion mitigation effect became negligible in 15 months after the spray. The results consistently demonstrated the effectiveness of nitrite spray on the MICC mitigation and identified the re-application frequencies for full scale applications.

Novel Approaches for Biocorrosion Mitigation in Sewer Systems

Concrete sewer pipes can be corroded by the biogenic sulfuric acid (H2SO4) generated from microbiological activities in a process called biocorrosion or microbiologically induced corrosion (MIC). In this study, inhibitors that can reduce Acidithiobacillus thiooxidans growth and thus may reduce the accumulation of biofilm components responsible for the biodegradation of concrete were used. D-tyrosine, tetrakis hydroxymethyl phosphonium sulfate (THPS) and TiO2 nanoparticles were investigated as potential inhibitors of sulfur-oxidizing bacteria (SOB) growth. Results showed that most of the chemicals used can inhibit SOB growth at a concentration lower than 100 mg/L. TiO2 nanoparticles exhibited the highest biocide effect and potential biocorrosion mitigation activity, followed by D-tyrosine and THPS.

Current status, existent problems, and coping strategy of urban drainage pipeline network in China

Urban drainage pipeline systems collect and transport domestic sewage, industrial wastewater, and rainwater. They are important components of urban infrastructure. The quality of drainage facilities directly determines the level of urban development and affects the urban landscape and sanitary environment. In recent years, however, the phenomenon of "attaching importance to construction, despising management and maintenance" has prevailed in China's urban drainage pipeline network. The problems such as structural damage, corrosion, and blockage of the sewage pipelines are becoming increasingly prominent in China, causing a lot of operational challenges such as direct discharge of sewage, backward irrigation of river and lake water, infiltration of external water, and overflow pollution. To comprehensively acquire these information about China's urban drainage pipeline network, this paper reviews current status of construction, operation, management and maintenance, existent problems, and coping strategy of the sewage pipelines. Finally, future directions are also discussed in detail for rational construction and maintenance of sewage pipelines.

Uncertainties in estimating SARS-CoV-2 prevalence by wastewater-based epidemiology

Wastewater-based epidemiology (WBE) is a promising approach for estimating population-wide COVID-19 prevalence through detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in wastewater. However, various methodological challenges associated with WBE would affect the accuracy of prevalence estimation. To date, the overall uncertainty of WBE and the impact of each step on the prevalence estimation are largely unknown. This study divided the WBE approach into five steps (i.e., virus shedding; in-sewer transportation; sampling and storage; analysis of SARS-CoV-2 RNA concentration in wastewater; back-estimation) and further summarized and quantified the uncertainties associated with each step through a systematic review. Although the shedding of SARS-CoV-2 RNA varied greatly between COVID-19 positive patients, with more than 10 infected persons in the catchment area, the uncertainty caused by the excretion rate became limited for the prevalence estimation. Using a high-frequency flow-proportional sampling and estimating the prevalence through actual water usage data significantly reduced the overall uncertainties to around 20-40% (relative standard deviation, RSD). And under such a scenario, the analytical uncertainty of SARS-CoV-2 RNA in wastewater was the dominant factor. This highlights the importance of using surrogate viruses as internal or external standards during the wastewater analysis, and the need for further improvement on analytical approaches to minimize the analytical uncertainty. This study supports the application of WBE as a complementary surveillance strategy for monitoring COVID-19 prevalence and provides methodological improvements and suggestions to enhance the reliability for future studies.

Urban wastewater bacterial communities assemble into seasonal steady states

BACKGROUND

Microorganisms in urban sanitary sewers exhibit community properties that suggest sewers are a novel ecosystem. Sewer microorganisms present both an opportunity as a control point for wastewater treatment and a risk to human health. If treatment processes are to be improved and health risks quantified, then it is necessary to understand microbial distributions and dynamics within this community. Here, we use 16S rRNA gene sequencing to characterize raw influent wastewater bacterial communities in a 5-year time series from two wastewater treatment plants in Milwaukee, WI; influent wastewater from 77 treatment plants across the USA; and wastewater in 12 Milwaukee residential sewers.

RESULTS

In Milwaukee, we find that in transit from residences to treatment plants, the human bacterial component of wastewater decreases in proportion and exhibits stochastic temporal variation. In contrast, the resident sewer community increases in abundance during transit and cycles seasonally according to changes in wastewater temperature. The result is a bacterial community that assembles into two distinct community states each year according to the extremes in wastewater temperature. Wastewater bacterial communities from other northern US cities follow temporal trends that mirror those in Milwaukee, but southern US cities have distinct community compositions and differ in their seasonal patterns.

CONCLUSIONS

Our findings provide evidence that environmental conditions associated with seasonal change and climatic differences related to geography predictably structure the bacterial communities residing in below-ground sewer pipes. Video abstract.

Control sulfide and methane production in sewers based on free ammonia inactivation

Emissions of hydrogen sulfide and methane are two of the major concerns in sewers, causing corrosion, odour and health problems. This study proposed a new free ammonia (FA)-based approach for controlling the biological production of sulfide and methane in sewers. This is based on the discovery that the FA contained in urine wastewater is strongly biocidal to anaerobic sewer biofilms. Long-term operation of two laboratory sewer reactors, with one being dosed with urine wastewater and the other being dosed with raw sewage as a control, revealed the effectiveness of the proposed FA approach. The results showed that dosing of real urine wastewater at FA concentration of 154 mg NH₃-N/L with exposure for 24 h immediately reduced over 80% sulfide and methane in the experimental sewer reactor, while the time for recovering 50% sulfide and methane production were 6 days and 28 days, respectively. It also showed that intermittent dosing with an interval time of 5-15 days reduced around 60% sulfide on average. As suggested by community analysis, the remaining sulfide might be produced by a sulfate-reducing bacterial genus Desulfobulbus. Collectively, urine is a part of municipal sewage, and thus separation and re-dosing of the urine wastewater into the sewer for sulfide and methane control should enable the minimization of operational costs and environmental impacts, compared with the previous dosing of chemicals.

Rebar corrosion and its interaction with concrete degradation in reinforced concrete sewers

Concrete corrosion, as a major issue in sewer management, has attracted considerable research. In comparison, the corrosion of reinforcing steel bar (rebar) is not well understood. Particularly, fundamental knowledge of rebar corrosion and its interactions with concrete corrosion/cracking is largely lacking. This study investigated rebar corrosion and concrete degradation using reinforced concrete coupons exposed in a pilot sewer system. The physical-chemical corrosion characteristics were investigated in local regions; the nature of rebar rusts was analyzed using the advanced mineral analytical techniques, including Scanning Electron Microscope (SEM), Energy Dispersive X-ray Spectroscopy (EDS) and X-ray Diffraction (XRD); further, the interactions between rebar corrosion and concrete corrosion/cracking were elucidated by characterizing the microstructure and element distribution in interfacial areas using Mineral Liberation Analysis (MLA). The rebar corrosion products were found to be iron oxides, oxyhydroxides, chlorides, sulfides and sulfates. The predominant rebar corrosion reactions varied with exposure time and the development of concrete corrosion. When concrete corrosion reached rebar surface, the cracking of the concrete cover was influenced by multiple effects, including the macro-cracking induced by the corrosion products expansion, and the micro-cracking accelerated by the dissolution, diffusion and deposition of Fe derived from rebar rusts at the concrete corrosion front. A conceptual model elucidating rebar corrosion and the complex interactions between rebar corrosion and concrete degradation is proposed to support the development of corrosion prevention and refurbishment strategies for reinforced concrete sewers.

Anticorrosion Behavior of the SiO2/Epoxy Nanocomposite-Concrete Lining System under H2SO4 Acid Aqueous Environment

Concrete structures in the sewer are corroded by sulfuric acid solution resulted from the actions of microorganisms in a sewer environment. Many reports pointed out that it can shorten the service life of concrete sewer networks from 10 to 50 years. Isolation of sulfuric acid solution from the surface of the sewerage concrete structures by using a polymer lining is effective corrosion protection. This study presents the preparation of a silica-epoxy nanocomposite material used for this lining purpose. Diffusion behavior, the cohesion of the lining on the concrete surface under the severer conditions, was investigated. Dispersion and distribution of the nanoparticles in the epoxy matrix confirmed by scanning electron microscopy (SEM) and X-ray diffraction analysis contribute to the enhancement of the lining's barrier properties to water and to H₂SO₄ acid solution at different temperatures. An improvement of cohesion between the concrete and the nanocomposite lining was found. The nanocomposite lining remained cohesive on a concrete substrate almost two times longer than the neat lining when they were exposed to the 10.0 wt % H₂SO₄ acid solution at both 40 and 60 °C. The energy-dispersive system combined SEM analysis results of the pulled-off linings confirmed that the corrosion of the concrete interfaces is because of H₂SO₄ acid. It contributes to the adhesion loss of the lining. Thus, loaded nanosilica particles into epoxy enhance barrier properties, bond strength, and longevity of the service life of the sewerage concrete structure.

Increased Resistance of Nitrite-Admixed Concrete to Microbially Induced Corrosion in Real Sewers

Microbially induced concrete corrosion is a major deterioration process in sewers, causing a huge economic burden, and improved mitigating technologies are required. This study reports a novel and promising effective solution to attenuate the corrosion in sewers using calcium nitrite-admixed concrete. This strategy aims to suppress the development and activity of corrosion-inducing microorganisms with the antimicrobial free nitrous acid, which is generated in situ from calcium nitrite that is added to the concrete. Concrete coupons with calcium nitrite as an admixture were exposed in a sewer manhole, together with control coupons that had no nitrite admixture, for 18 months. The corrosion process was monitored by measuring the surface pH, corrosion product composition, concrete corrosion loss, and the microbial community on the corrosion layer. During the exposure, the corrosion loss of the admixed concrete coupons was 30% lower than that of the control coupons. The sulfide uptake rate of the admixed concrete was also 30% lower, leading to a higher surface pH (0.5-0.6 unit), in comparison to that of the control coupons. A negative correlation between the calcium nitrite admixture in concrete and the abundance of sulfide-oxidizing microorganisms was determined by DNA sequencing. The results obtained in this field study demonstrated that this novel use of calcium nitrite as an admixture in concrete is a promising strategy to mitigate the microbially induced corrosion in sewers.

Analysis of interdomain taxonomic patterns in urban street mats

Streets are constantly crossed by billions of vehicles and pedestrians. Their gutters, which convey stormwater and contribute to waste management, and are important for human health and well-being, probably play a number of ecological roles. Street surfaces may also represent an important part of city surface areas. To better characterize the ecology of this yet poorly explored compartment, we used filtration and DNA metabarcoding to address microbial community composition and assembly across the city of Paris, France. Diverse bacterial and eukaryotic taxonomic groups were identified, including members involved in key biogeochemical processes, along with a number of parasites and putative pathogens of human, animals and plants. We showed that the beta diversity patterns between bacterial and eukaryotic communities were correlated, suggesting interdomain associations. Beta diversity analyses revealed the significance of biotic factors (cohesion metrics) in shaping gutter microbial community assembly and, to a lesser extent, the contribution of abiotic factors (pH and conductivity). Co-occurrences analysis confirmed contrasting non-random patterns both within and between domains of life, specifically when comparing diatoms and fungi. Our results highlight microbial coexistence patterns in streets and reinforce the need to further explore biodiversity in urban ground transportation infrastructures.

Current status and future prospects of sewer biofilms: Their structure, influencing factors, and substance transformations

With rapid urbanization, sewer systems are extensively being constructed for the collection and transportation of sewage to minimize the severe environmental and health issues, especially relating to the spread diseases. The existence of abundant biofilms on the inner walls of sewers could lead to potential risks such as sewer explosions, poisonous gas leaks, and pipe corrosions with the transformations of various kinds of pollutants. Therefore, it is urgent to clarify their inner mechanisms to safely govern sewer systems. In this study, the characteristics of sewer biofilms including their structure, influencing factors, and substance transformations were analyzed in-depth. The results reveal that sewer biofilms (1.0 mm depth approximately) consist of large quantities of inorganic and some organic substances, while the abundant functional genus of the bacteria and archaea are summarized. Sewer biofilms influencing factors were determined to be sewer operation mode, sewage characteristics, and shear stress. Further, the transformation of organics, sulfur, and nitrogen as well as emerging micropollutants (such as, biomarkers, antibiotic resistance genes, and engineered nanoparticles) was investigated to guarantee sewer security and public health. Therefore, the current review could be considered as guidance for researchers and decision-makers.

The rapid chemically induced corrosion of concrete sewers at high H2S concentration

Concrete corrosion in sewers is primarily caused by H₂S in sewer atmosphere. H₂S concentration can vary from several ppm to hundreds of ppm in real sewers. Our understanding of sewer corrosion has increased dramatically in recent years, however, there is limited knowledge of the concrete corrosion at high H₂S levels. This study examined the corrosion development in sewers with high H₂S concentrations. Fresh concrete coupons, manufactured according to sewer pipe standards, were exposed to corrosive conditions in a pilot-scale gravity sewer system with gaseous H₂S at 1100 ± 100 ppm. The corrosion process was continuously monitored by measuring the surface pH, corrosion product composition, corrosion loss and the microbial community. The surface pH of concrete was reduced from 10.5 ± 0.3 to 3.1 ± 0.5 within 20 days and this coincided with a rapid corrosion rate of 3.5 ± 0.3 mm year ^-1. Microbial community analysis based on 16S rRNA gene sequencing indicated the absence of sulfide-oxidizing microorganisms in the corrosion layer. The chemical analysis of corrosion products supported the reaction of cement with sulfuric acid formed by the chemical oxidation of H₂S. The rapid corrosion of concrete in the gravity pipe was confirmed to be caused by the chemical oxidation of hydrogen sulfide at high concentrations. This is in contrast to the conventional knowledge that is focused on microbially induced corrosion. This first-ever systematic investigation shows that chemically induced oxidation of H₂S leads to the rapid corrosion of new concrete sewers within a few weeks. These findings contribute novel understanding of in-sewer corrosion processes and hold profound implications for sewer operation and corrosion management.

Microbial Ecology of Biofiltration Units Used for the Desulfurization of Biogas

Bacterial communities’ composition, activity and robustness determines the effectiveness of biofiltration units for the desulfurization of biogas. It is therefore important to get a better understanding of the bacterial communities that coexist in biofiltration units under different operational conditions for the removal of H2S, the main reduced sulfur compound to eliminate in biogas. This review presents the main characteristics of sulfur-oxidizing chemotrophic bacteria that are the base of the biological transformation of H2S to innocuous products in biofilters. A survey of the existing biofiltration technologies in relation to H2S elimination is then presented followed by a review of the microbial ecology studies performed to date on biotrickling filter units for the treatment of H2S in biogas under aerobic and anoxic conditions.

Influence of Dissolved-Aluminum Concentration on Sulfur-Oxidizing Bacterial Activity in the Biodeterioration of Concrete

Several studies undertaken on the biodeterioration of concrete sewer infrastructures have highlighted the better durability of aluminate-based materials. The bacteriostatic effect of aluminum has been suggested to explain the increase in durability of these materials. However, no clear demonstration of the negative effect of aluminum on cell growth has been yet provided in the literature. In the present study, we sought to investigate the inhibitory potential of dissolved aluminum on nonsterile microbial cultures containing sulfur-oxidizing microorganisms. Both kinetic (maximum specific growth rate) and stoichiometric (oxygen consumption yield) parameters describing cells activity were accurately determined by using respirometry measurements coupled with modeled data obtained from fed-batch cultures run for several days at pH below 4 and with increasing total aluminum (Al_tot) concentrations from 0 to 100 mM. Short-term inhibition was observed for cells poorly acclimated to high salinity. However, inhibition was significantly attenuated for cells grown on mortar substrate. Moreover, after a rapid adaptation, and for an Al_tot concentration up to 100 mM, both kinetic and stoichiometric growth parameters remained similar to those obtained in control culture conditions where no aluminum was added. This argued in favor of the impact of ionic strength change on the growth of sulfur-oxidizing microorganism rather than an inhibitory effect of dissolved aluminum. Other assumptions must therefore be put forward in order to explain the better durability of cement containing aluminate-based materials in sewer networks. Among these assumptions, the influence of physical or chemical properties of the material (phase reactivity, porosity, etc.) might be proposed.IMPORTANCE Biodeterioration of cement infrastructures represents 5 to 20% of observed deteriorations within the sewer network. Such biodeterioration events are mainly due to microbial sulfur-oxidizing activity which produces sulfuric acid able to dissolve cementitious material. Calcium aluminate cement materials are more resistant to biodeterioration compared to the commonly used Portland cement. Several theories have been suggested to describe this resistance, and the bacteriostatic effect of aluminum seems to be the most plausible explanation. However, results reported by the several studies on this exact topic are highly controversial. This present study provides a comprehensive analysis of the influence of dissolved aluminum on growth parameters of long-term cultures of sulfur-oxidizing bacterial consortia sampled from different origins. Kinetic and stoichiometric parameters estimated by respirometry measurements and modeling showed that total dissolved-aluminum concentrations up to 100 mM were not inhibitory, but it is more likely that a sudden increase in the ionic strength affects cell growth. Therefore, it appears that the bacteriostatic effect of aluminum on microbial growth cannot explain the better durability of aluminate based cementitious materials.

Biofilms: The Microbial "Protective Clothing" in Extreme Environments

Microbial biofilms are communities of aggregated microbial cells embedded in a self-produced matrix of extracellular polymeric substances (EPS). Biofilms are recalcitrant to extreme environments, and can protect microorganisms from ultraviolet (UV) radiation, extreme temperature, extreme pH, high salinity, high pressure, poor nutrients, antibiotics, etc., by acting as "protective clothing". In recent years, research works on biofilms have been mainly focused on biofilm-associated infections and strategies for combating microbial biofilms. In this review, we focus instead on the contemporary perspectives of biofilm formation in extreme environments, and describe the fundamental roles of biofilm in protecting microbial exposure to extreme environmental stresses and the regulatory factors involved in biofilm formation. Understanding the mechanisms of biofilm formation in extreme environments is essential for the employment of beneficial microorganisms and prevention of harmful microorganisms.

Removal of Pharmaceuticals and Illicit Drugs from Wastewater Due to Ferric Dosing in Sewers

Ferric (Fe³⁺) salt dosing is an efficient sulfide control strategy in the sewer network, with potential for multiple benefits including phosphorus removal in the biological reactors and sulfide emission control in the anaerobic digesters of wastewater treatment plant (WWTP). This paper extends the knowledge on the benefit of iron dosing by exploring its impact on the fate of organic micropollutants (MPs) in the wastewater using sewer reactors simulating a rising main sewer pipe. The sulfide produced by the sewer biofilms reacted with Fe³⁺ forming black colored iron sulfide (FeS). Among the selected MPs, morphine, methadone, and atenolol had >90% initial rapid removal within 5 min of ferric dosing in the sewer reactor. The ultimate removal after 6 h of retention time in the reactor reached 93-97%. Other compounds, ketamine, codeine, carbamazepine, and acesulfame had 30-70% concentration decrease. The ultimate removal varied between 35 and 70% depending on the biodegradability of those MPs. In contrast, paracetamol had no initial removal. The rapid removal of MPs was likely due to adsorption to the FeS surface, which is further confirmed by batch tests with different FeS concentrations. The results showed a direct relationship between the removal of MPs and FeS concentration. The transformation kinetics of these compounds in the reactor without Fe³⁺ dosing is in good agreement with biodegradation associated with the sewer biofilms in the reactor. This study revealed a significant additional benefit of dosing ferric salts in sewers, that is, the removal of MPs before the sewage enters the WWTP.

Evaluation of data-driven models for predicting the service life of concrete sewer pipes subjected to corrosion

Concrete corrosion is one of the most significant failure mechanisms of sewer pipes, and can reduce the sewer service life significantly. To facilitate the management and maintenance of sewers, it is essential to obtain reliable prediction of the expected service life of sewers, especially if that is based on limited environmental conditions. Recently, a long-term study was performed to identify the controlling factors of concrete sewer corrosion using well-controlled laboratory-scale corrosion chambers to vary levels of H₂S concentration, relative humidity, temperature and in-sewer location. Using the results of the long-term study, three different data-driven models, i.e. multiple linear regression (MLR), artificial neural network (ANN), and adaptive neuro fuzzy inference system (ANFIS), as well as the interaction between environmental parameters, were assessed for predicting the corrosion initiation time (t_i) and corrosion rate (r). This was performed using the sewer environmental factors as the input under 12 different scenarios after allowing for an initiation corrosion period. ANN and ANFIS models showed better performance than MLR models, with or without considering the interactions between environmental factors. With the limited input data available, it was observed that t_i prediction by these models is quite sensitive, however, they are more robust for predicting r as long as the H₂S concentration is available. Using the H₂S concentration as a single input, all three data driven models can reasonably predict the sewer service life.

Distinct microbially induced concrete corrosion at the tidal region of reinforced concrete sewers

Microbially induced concrete corrosion (MICC) is a major deterioration affecting sewers worldwide. MICC is not uniform on sewer inner walls and often occurs at hot spots such as crown and tidal regions, which are critical to determine sewer service life. Especially, concrete corrosion in tidal regions is complicated due to the fluctuation of wastewater levels and the hydraulic scouring effects. The traditional methodology of corrosion monitoring also limits the study of the tidal corrosion. In this study, by using a combination of various advanced mineral analytical techniques and culture-independent 16S rRNA gene amplicon sequencing, the development of corrosion, the formation of corrosion products and the variation of microbial communities in tidal regions were investigated systematically. The physical-chemical characteristics in tidal regions varied with the distance from the wastewater surface. Above the wastewater, more severe corrosion was detected with a closer distance to wastewater, producing gypsum as the major corrosion products. The microbial succession in tidal regions occurred, with the coexistence of conventional autotrophic SOB and acidophilic heterotrophic bacteria initially, and shifting to the predominant colonization of Mycobacterium when pH reached around 1. The heterotrophic bacteria, i.e. Mycobacterium and Bacillus, were likely responsible for the observed corrosion due to the potential capability in generating sulfuric acid. The applications of advanced mineral and microbial analytical techniques were demonstrated effective in improving the understanding of concrete sewer corrosion.

Inner Profile Measurement for Pipes Using Penetration Testing

Penetration testing has been used to measure material properties for over fifty years. Currently, it is under-utilised as a contemporary scientific and engineering tool for investigating the condition of pipes whose inner surface has been exposed to chemical attack. We describe the design, development and calibration of a portable probe which uses a penetrative strain gauge load cell to measure where the semi-solid surface starts and stops within a pipe. We also describe the results of field tests of the probe in concrete sewers, affected by internal corrosion, where the probe proved to be a fast and reliable method for collecting pipe profile information. The results indicate significant benefit in the use of penetrometers to perform concrete sewer condition assessment.

A thiotrophic microbial community in an acidic brine lake in Northern Chile

The endorheic basins of the Northern Chilean Altiplano contain saline lakes and salt flats. Two of the salt flats, Gorbea and Ignorado, have high acidic brines. The causes of the local acidity have been attributed to the occurrence of volcanic native sulfur, the release of sulfuric acid by oxidation, and the low buffering capacity of the rocks in the area. Understanding the microbial community composition and available energy in this pristine ecosystem is relevant in determining the origin of the acidity and in supporting the rationale of conservation policies. Besides, a comparison between similar systems in Australia highlights key microbial components and specific ones associated with geological settings and environmental conditions. Sediment and water samples from the Salar de Gorbea were collected, physicochemical parameters measured and geochemical and molecular biological analyses performed. A low diversity microbial community was observed in brines and sediments dominated by Actinobacteria, Algae, Firmicutes and Proteobacteria. Most of the constituent genera have been reported to be either sulfur oxidizing microorganisms or ones having the potential for sulfur oxidation given available genomic data and information drawn from the literature on cultured relatives. In addition, a link between sulfur oxidation and carbon fixation was observed. In contrast, to acid mine drainage communities, Gorbea microbial diversity is mainly supported by chemolithoheterotrophic, facultative chemolithoautotrophic and oligotrophic sulfur oxidizing populations indicating that microbial activity should also be considered as a causative agent of local acidity.

Advances in concrete materials for sewer systems affected by microbial induced concrete corrosion: A review

Microbial induced concrete corrosion (MICC) is recognized as one of the main degradation mechanisms of subsurface infrastructure worldwide, raising the demand for sustainable construction materials in corrosive environments. This review aims to summarize the key research progress acquired during the last decade regarding the understanding of MICC reaction mechanisms and the development of durable materials from an interdisciplinary perspective. Special focus was laid on aspects governing concrete - micoorganisms interaction since being the central process steering biogenic acid corrosion. The insufficient knowledge regarding the latter is proposed as a central reason for insufficient progress in tailored material development for aggressive wastewater systems. To date no cement-based material exists, suitable to withstand the aggressive conditions related to MICC over its entire service life. Research is in particular needed on the impact of physiochemical material parameters on microbial community structure, growth characteristics and limitations within individual concrete speciation. Herein an interdisciplinary approach is presented by combining results from material sciences, microbiology, mineralogy and hydrochemistry to stimulate the development of novel and sustainable materials and mitigation strategies for MICC. For instance, the application of antibacteriostatic agents is introduced as an effective instrument to limit microbial growth on concrete surfaces in aggressive sewer environments. Additionally, geopolymer concretes are introduced as highly resistent in acid environments, thus representing a possible green alternative to conventional cement-based construction materials.