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Thiagarajan V, Nah T, Xin X. Impacts of atmospheric particulate matter deposition on phytoplankton: A review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 950:175280. [PMID: 39122032 DOI: 10.1016/j.scitotenv.2024.175280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Revised: 08/01/2024] [Accepted: 08/02/2024] [Indexed: 08/12/2024]
Abstract
In many rapidly urbanizing and industrializing countries, atmospheric pollution causes severe environmental problems and compromises the health of humans and ecosystems. Atmospheric emissions, which encompass gases and particulate matter, can be transported back to the earth's surface through atmospheric deposition. Atmospheric deposition supplies chemical species that can serve as nutrients and/or toxins to aquatic ecosystems, resulting in wide-ranging responses of aquatic organisms. Among the aquatic organisms, phytoplankton is the basis of the aquatic food web and is a key player in global primary production. Atmospheric deposition alters nutrient availability and thus influences phytoplankton species abundance and composition. This review provides a comprehensive overview of the physiological responses of phytoplankton resulting from the atmospheric deposition of trace metals, nitrogen-containing compounds, phosphorus-containing compounds, and sulfur-containing compounds in particulate matter into aquatic ecosystems. Knowledge gaps and critical areas for future studies are also discussed.
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Affiliation(s)
- Vignesh Thiagarajan
- School of Energy and Environment and State Key Laboratory of Marine Pollution, City University of Hong Kong, Hong Kong
| | - Theodora Nah
- School of Energy and Environment and State Key Laboratory of Marine Pollution, City University of Hong Kong, Hong Kong.
| | - Xiaying Xin
- Beaty Water Research Centre, Department of Civil Engineering, Queen's University, Kingston, Ontario K7L 3N6, Canada.
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2
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Bi Z, Wang W, Zhao L, Wang X, Xing D, Zhou Y, Lee DJ, Ren N, Chen C. The generation and transformation mechanisms of reactive oxygen species in the environment and their implications for pollution control processes: A review. ENVIRONMENTAL RESEARCH 2024; 260:119592. [PMID: 39002629 DOI: 10.1016/j.envres.2024.119592] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 07/07/2024] [Accepted: 07/09/2024] [Indexed: 07/15/2024]
Abstract
Reactive oxygen species (ROS), substances with strong activity generated by oxygen during electron transfer, play a significant role in the decomposition of organic matter in various environmental settings, including soil, water and atmosphere. Although ROS has a short lifespan (ranging from a few nanoseconds to a few days), it continuously generated during the interaction between microorganisms and their environment, especially in environments characterized by strong ultraviolet radiation, fluctuating oxygen concentration or redox conditions, and the abundance of metal minerals. A comprehensive understanding of the fate of ROS in nature can provide new ideas for pollutant degradation and is of great significance for the development of green degradation technologies for organic pollutants. At present, the review of ROS generally revolves around various advanced oxidation processes, but lacks a description and summary of the fate of ROS in nature, this article starts with the definition of reactive oxidants species and reviews the production, migration, and transformation mechanisms of ROS in soil, water and atmospheric environments, focusing on recent developments. In addition, the stimulating effects of ROS on organisms were reviewed. Conclusively, the article summarizes the classic processes, possible improvements, and future directions for ROS-mediated degradation of pollutants. This review offers suggestions for future research directions in this field and provides the possible ROS technology application in pollutants treatment.
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Affiliation(s)
- Zhihao Bi
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China
| | - Wei Wang
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China.
| | - Lei Zhao
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China
| | - Xueting Wang
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China
| | - Defeng Xing
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China
| | - Yanfeng Zhou
- Heilongjiang Agricultural Engineering Vocational College, Harbin, Heilongjiang Province, 150070, China
| | - Duu-Jong Lee
- Department of Mechanical Engineering, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China; Department of Chemical Engineering and Materials Science, Yuan Ze University, Chung-li, 32003, Taiwan
| | - Nanqi Ren
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China; Shenzhen Graduate School, Harbin Institute of Technology, Shenzhen, 518055, China
| | - Chuan Chen
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin, Heilongjiang Province, 150090, China.
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Sumathi Y, Dong CD, Singhania RR, Chen CW, Gurunathan B, Patel AK. Advancements in Nano-Enhanced microalgae bioprocessing. BIORESOURCE TECHNOLOGY 2024; 401:130749. [PMID: 38679239 DOI: 10.1016/j.biortech.2024.130749] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Revised: 04/25/2024] [Accepted: 04/25/2024] [Indexed: 05/01/2024]
Abstract
Microalgae are promising sources of valuable compounds: carotenoids, polyunsaturated fatty acids, lipids, etc. To overcome the feasibility challenge due to low yield and attain commercial potential, researchers merge technologies to enhance algal bioprocess. In this context, nanomaterials are attractive for enhancing microalgal bioprocessing, from cultivation to downstream extraction. Nanomaterials enhance biomass and product yields (mainly lipid and carotenoids) through improved nutrient uptake and stress tolerance during cultivation. They also provide mechanistic insights from recent studies. They also revolutionize harvesting via nano-induced sedimentation, flocculation, and flotation. Downstream processing benefits from nanomaterials, improving extraction and purification. Special attention is given to cost-effective extraction, showcasing nanomaterial integration, and providing a comparative account. The review also profiles nanomaterial types, including metallic nanoparticles, magnetic nanomaterials, carbon-based nanomaterials, silica nanoparticles, polymers, and functionalized nanomaterials. Challenges and future trends are discussed, emphasizing nanomaterials' role in advancing sustainable and efficient microalgal bioprocessing, unlocking their potential for bio-based industries.
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Affiliation(s)
- Yamini Sumathi
- Institute of Aquatic Science and Technology, College of Hydrosphere, National Kaohsiung University of Science and Technology, Kaohsiung City 81157, Taiwan
| | - Cheng-Di Dong
- Institute of Aquatic Science and Technology, College of Hydrosphere, National Kaohsiung University of Science and Technology, Kaohsiung City 81157, Taiwan; Department of Marine Environmental Engineering, National Kaohsiung University of Science and Technology, Kaohsiung City, Taiwan
| | - Reeta Rani Singhania
- Institute of Aquatic Science and Technology, College of Hydrosphere, National Kaohsiung University of Science and Technology, Kaohsiung City 81157, Taiwan; Centre for Energy and Environmental Sustainability, Lucknow 226 029, Uttar Pradesh, India
| | - Chiu-Wen Chen
- Institute of Aquatic Science and Technology, College of Hydrosphere, National Kaohsiung University of Science and Technology, Kaohsiung City 81157, Taiwan
| | - Baskar Gurunathan
- Department of Biotechnology, St. Joseph's College of Engineering, Chennai 600119, India
| | - Anil Kumar Patel
- Institute of Aquatic Science and Technology, College of Hydrosphere, National Kaohsiung University of Science and Technology, Kaohsiung City 81157, Taiwan; Centre for Energy and Environmental Sustainability, Lucknow 226 029, Uttar Pradesh, India.
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Schiksnis C, Xu M, Saito MA, McIlvin M, Moran D, Bian X, John SG, Zheng Q, Yang N, Fu F, Hutchins DA. Proteomics analysis reveals differential acclimation of coastal and oceanic Synechococcus to climate warming and iron limitation. Front Microbiol 2024; 15:1323499. [PMID: 38444803 PMCID: PMC10912551 DOI: 10.3389/fmicb.2024.1323499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Accepted: 01/30/2024] [Indexed: 03/07/2024] Open
Abstract
In many oceanic regions, anthropogenic warming will coincide with iron (Fe) limitation. Interactive effects between warming and Fe limitation on phytoplankton physiology and biochemical function are likely, as temperature and Fe availability affect many of the same essential cellular pathways. However, we lack a clear understanding of how globally significant phytoplankton such as the picocyanobacteria Synechococcus will respond to these co-occurring stressors, and what underlying molecular mechanisms will drive this response. Moreover, ecotype-specific adaptations can lead to nuanced differences in responses between strains. In this study, Synechococcus isolates YX04-1 (oceanic) and XM-24 (coastal) from the South China Sea were acclimated to Fe limitation at two temperatures, and their physiological and proteomic responses were compared. Both strains exhibited reduced growth due to warming and Fe limitation. However, coastal XM-24 maintained relatively higher growth rates in response to warming under replete Fe, while its growth was notably more compromised under Fe limitation at both temperatures compared with YX04-1. In response to concurrent heat and Fe stress, oceanic YX04-1 was better able to adjust its photosynthetic proteins and minimize the generation of reactive oxygen species while reducing proteome Fe demand. Its intricate proteomic response likely enabled oceanic YX04-1 to mitigate some of the negative impact of warming on its growth during Fe limitation. Our study highlights how ecologically-shaped adaptations in Synechococcus strains even from proximate oceanic regions can lead to differing physiological and proteomic responses to these climate stressors.
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Affiliation(s)
- Cara Schiksnis
- Marine and Environmental Biology, University of Southern California, Los Angeles, CA, United States
| | - Min Xu
- State Key Laboratory of Marine Resource Utilization in South China Sea, Hainan University, Haikou, China
| | - Mak A. Saito
- Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, United States
| | - Matthew McIlvin
- Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, United States
| | - Dawn Moran
- Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, United States
| | - Xiaopeng Bian
- Marine and Environmental Biology, University of Southern California, Los Angeles, CA, United States
| | - Seth G. John
- Marine and Environmental Biology, University of Southern California, Los Angeles, CA, United States
| | - Qiang Zheng
- State Key Laboratory of Marine Environmental Science, Institute of Marine Microbes and Ecospheres, Xiamen University, Xiamen, China
| | - Nina Yang
- Marine and Environmental Biology, University of Southern California, Los Angeles, CA, United States
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, United States
- Marine Policy Center, Woods Hole Oceanographic Institution, Woods Hole, MA, United States
| | - Feixue Fu
- Marine and Environmental Biology, University of Southern California, Los Angeles, CA, United States
| | - David A. Hutchins
- Marine and Environmental Biology, University of Southern California, Los Angeles, CA, United States
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Li B, Zhang X, Wu G, Qin B, Tefsen B, Wells M. Toxins from harmful algal blooms: How copper and iron render chalkophore a predictor of microcystin production. WATER RESEARCH 2023; 244:120490. [PMID: 37659180 DOI: 10.1016/j.watres.2023.120490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 07/17/2023] [Accepted: 08/13/2023] [Indexed: 09/04/2023]
Abstract
Research on harmful algal blooms has focused on macronutrients, yet recent research increasingly indicates that understanding micronutrient roles is also important in the development of effective environmental management interventions. Here, we report results on metallophore production from mesocosms amended with copper and iron (enzymatic co-factors in photosynthetic electron transport) to probe questions of how cyanobacteria navigate the divide between copper nutrition, copper toxicity, and issues with iron bioavailability. These experiments utilized Microcystis, Chlorella and Desmodesmus spp., in mono- and mixed-cultures in lake water from a large, hypereutrophic lake (Taihu, China). To initiate experiments, copper and iron amendments were added to mesocosms containing algae that had been acclimated to achieve a state of copper and iron limitation. Mesocosms were analyzed over time for a range of analytes including algal growth parameters, algal assemblage progression, copper/iron concentrations and biomolecule production of chalkophore, siderophore and total microcystins. Community Trajectory Analysis and other multivariate methods were used for analysis resulting in our findings: 1) Microcystis spp. manage copper/iron requirements though a dynamically phased behavior of chalkophore/siderophore production according to their copper and iron limitation status (chalkophore correlates with Cu concentration, R2 = 0.99, and siderophore correlates with the sum of Cu and Fe concentrations, R2 = 0.98). 2) A strong correlation was observed between the production of chalkophore and the cyanobacterial toxin microcystin (R2 = 0.76)-Chalkophore is a predictor of microcystin production. 3) Based on our results and literature, we posit that Microcystis spp. produces microcystin in response to copper/iron availability to manage photosystem productivity and effect an energy-saving status. Results from this work underscore the importance of micronutrients in influencing harmful algal bloom progression and represents a major advance in understanding the ecological function for the cyanobacterial toxin microcystin as a hallmark of micronutrient limitation stress.
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Affiliation(s)
- Boling Li
- School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, 215123, China
| | - Xiaokai Zhang
- Institute of Environmental Processes and Pollution Control, and School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China
| | - Gongjie Wu
- Department of Biochemistry and Systems Biology, University of Liverpool, Brownlow Hill, Liverpool, L69 7ZX, UK; Department of Biological Sciences, Xi'an Jiaotong-Liverpool University, Suzhou, Jiangsu, 215123, China
| | - Boqiang Qin
- Taihu Laboratory for Lake Ecosystem Research, State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Boris Tefsen
- Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH, Utrecht, the Netherlands; Ronin Institute, 127 Haddon Place, Montclair, NJ, 07043, USA.
| | - Mona Wells
- Ronin Institute, 127 Haddon Place, Montclair, NJ, 07043, USA; Meadows Center for Water and the Environment, Texas State University, San Marcos, Texas, 78666, USA.
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Abidizadegan M, Blomster J, Peltomaa E. Effect of micronutrient iron on bioactive compounds isolated from cryptophytes. FRONTIERS IN PLANT SCIENCE 2023; 14:1208724. [PMID: 37575946 PMCID: PMC10413267 DOI: 10.3389/fpls.2023.1208724] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Accepted: 07/07/2023] [Indexed: 08/15/2023]
Abstract
Iron is one of the important micronutrients affecting algal growth due to its fundamental role in the physiological processes, including photosynthetic electron transport, respiration, and nitrogen fixation. In this study, the effect of different iron levels on growth and the production of bioactive compounds (phycoerythrin (PE), extracellular polymeric substances (EPS), and phenolic compounds (PCs)) of five cryptophyte strains were investigated. Also, the antioxidant capacity of the bioactive compounds was explored. The results showed species-specific responses to the impact of iron on growth of cryptophytes and accumulation of bioactive compounds. The growth rates of C. pyrenoidifera and Cryptomonas sp. varied significantly at different iron levels, and a reduction in the PE content was observed for several cryptophytes cultured at the highest iron level. However, no significant differences were detected in EPS content at different iron levels. Differences in PC contents of C. pyrenoidifera and Cryptomonas sp. at medium iron level were statistically significant compared with the other two treatments. The results also revealed species-specific differences in antioxidant activity at different iron levels; each studied strain followed its own pattern in response to change in iron level, and each bioactive compound had a different antioxidant activity. Overall, however, PCs demonstrated higher antioxidant activity than PE and EPS. In summary, iron has an impact on growth, bioactive compound accumulation, and antioxidant activity. However, the species-specific responses to changes in iron level should not be ignored when modifying culture conditions for optimal harvest of bioactive compounds.
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Affiliation(s)
- Maryam Abidizadegan
- Ecosystem and Environment Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | - Jaanika Blomster
- Ecosystem and Environment Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| | - Elina Peltomaa
- Department of Forest Sciences, University of Helsinki, Helsinki, Finland
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Sridevi B, Sabira S, Sarma VVSS. Impact of ocean warming on net primary production in the northern Indian Ocean: role of aerosols and freshening of surface ocean. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:53616-53634. [PMID: 36862297 DOI: 10.1007/s11356-023-26001-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 02/14/2023] [Indexed: 06/18/2023]
Abstract
Warming due to climate change stratifies the upper ocean and reduces nutrient input to the photic zone resulting in a decline in net primary production (NPP). On the other hand, climate change increases both anthropogenic aerosol input into the atmosphere and the river discharge due to the melting of glaciers on land resulting in enhanced nutrient inputs to the surface ocean and NPP. To examine the balance between these two processes, spatial and temporal variations in the rate of warming, NPP, aerosol optical depth (AOD), and sea surface salinity (SSS) were studied between 2001 and 2020 in the northern Indian Ocean. Strong heterogeneity in the warming of the sea surface was observed in the northern Indian Ocean with significant warming in the south of 12°N. Insignificant trends in warming were observed in the northern Arabian Sea (AS), north of 12°N, during winter and fall, and western Bay of Bengal (BoB) during winter, spring, and fall associated with higher levels of anthropogenic AOD (AAOD) due to a reduction in incoming solar radiation. The decline in NPP was observed in the south of 12°N in both AS and BoB and correlated inversely with SST suggesting that a weak supply of nutrients due to upper ocean stratification controlled NPP. Despite warming, the weak trends in NPP in the north of 12°N were associated with higher AAOD levels and their rate of increase suggesting that the deposition of nutrients from the aerosols seems to be compensating for declining trends due to warming. The decrease in sea surface salinity confirmed an increase in river discharge, and nutrient supply led to weak NPP trends in the northern BoB. This study suggests that the enhanced atmospheric aerosols and river discharge played a significant role in warming and changes in NPP in the northern Indian Ocean, and these parameters must be included in the ocean biogeochemical models for accurate prediction of possible changes in the upper ocean biogeochemistry in the future due to climate change.
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Affiliation(s)
- B Sridevi
- CSIR-National Institute of Oceanography, 176 Lawsons Bay Colony, Visakhapatnam, 530 017, India
| | - Sk Sabira
- CSIR-National Institute of Oceanography, 176 Lawsons Bay Colony, Visakhapatnam, 530 017, India
| | - V V S S Sarma
- CSIR-National Institute of Oceanography, 176 Lawsons Bay Colony, Visakhapatnam, 530 017, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
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Fahmi AM, Summers S, Jones M, Bowler B, Hennige S, Gutierrez T. Effect of ocean acidification on the growth, response and hydrocarbon degradation of coccolithophore-bacterial communities exposed to crude oil. Sci Rep 2023; 13:5013. [PMID: 36973465 PMCID: PMC10042988 DOI: 10.1038/s41598-023-31784-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Accepted: 03/17/2023] [Indexed: 03/29/2023] Open
Abstract
Hydrocarbon-degrading bacteria, which can be found living with eukaryotic phytoplankton, play a pivotal role in the fate of oil spillage to the marine environment. Considering the susceptibility of calcium carbonate-bearing phytoplankton under future ocean acidification conditions and their oil-degrading communities to oil exposure under such conditions, we investigated the response of non-axenic E. huxleyi to crude oil under ambient versus elevated CO2 concentrations. Under elevated CO2 conditions, exposure to crude oil resulted in the immediate decline of E. huxleyi, with concomitant shifts in the relative abundance of Alphaproteobacteria and Gammaproteobacteria. Survival of E. huxleyi under ambient conditions following oil enrichment was likely facilitated by enrichment of oil-degraders Methylobacterium and Sphingomonas, while the increase in relative abundance of Marinobacter and unclassified Gammaproteobacteria may have increased competitive pressure with E. huxleyi for micronutrient acquisition. Biodegradation of the oil was not affected by elevated CO2 despite a shift in relative abundance of known and putative hydrocarbon degraders. While ocean acidification does not appear to affect microbial degradation of crude oil, elevated mortality responses of E. huxleyi and shifts in the bacterial community illustrates the complexity of microalgal-bacterial interactions and highlights the need to factor these into future ecosystem recovery projections.
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Affiliation(s)
- Afiq Mohd Fahmi
- School of Engineering and Physical Science, Heriot-Watt University, Edinburgh, EH14 4AS, UK
- Fakulti Sains dan Sekitaran Marin, Universiti Malaysia Terengganu, 21030, Kuala, Terengganu, Malaysia
| | - Stephen Summers
- School of Engineering and Physical Science, Heriot-Watt University, Edinburgh, EH14 4AS, UK
- The Singapore Centre for Environmental Life Sciences Engineering and the School of Biological Sciences, Nanyang Technological University, Singapore, 637551, Singapore
| | - Martin Jones
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle Upon Tyne, NE17RU, UK
| | - Bernard Bowler
- School of Civil Engineering and Geosciences, Newcastle University, Newcastle Upon Tyne, NE17RU, UK
| | - Sebastian Hennige
- School of Geosciences, University of Edinburgh, Edinburgh, EH9 3JW, UK.
| | - Tony Gutierrez
- School of Engineering and Physical Science, Heriot-Watt University, Edinburgh, EH14 4AS, UK.
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Emerging Trends of Nanotechnology and Genetic Engineering in Cyanobacteria to Optimize Production for Future Applications. LIFE (BASEL, SWITZERLAND) 2022; 12:life12122013. [PMID: 36556378 PMCID: PMC9781209 DOI: 10.3390/life12122013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 11/20/2022] [Accepted: 11/28/2022] [Indexed: 12/12/2022]
Abstract
Nanotechnology has the potential to revolutionize various fields of research and development. Multiple nanoparticles employed in a nanotechnology process are the magic elixir that provides unique features that are not present in the component's natural form. In the framework of contemporary research, it is inappropriate to synthesize microparticles employing procedures that include noxious elements. For this reason, scientists are investigating safer ways to produce genetically improved Cyanobacteria, which has many novel features and acts as a potential candidate for nanoparticle synthesis. In recent decades, cyanobacteria have garnered significant interest due to their prospective nanotechnological uses. This review will outline the applications of genetically engineered cyanobacteria in the field of nanotechnology and discuss its challenges and future potential. The evolution of cyanobacterial strains by genetic engineering is subsequently outlined. Furthermore, the recombination approaches that may be used to increase the industrial potential of cyanobacteria are discussed. This review provides an overview of the research undertaken to increase the commercial avenues of cyanobacteria and attempts to explain prospective topics for future research.
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Yang N, Lin YA, Merkel CA, DeMers MA, Qu PP, Webb EA, Fu FX, Hutchins DA. Molecular mechanisms underlying iron and phosphorus co-limitation responses in the nitrogen-fixing cyanobacterium Crocosphaera. THE ISME JOURNAL 2022; 16:2702-2711. [PMID: 36008474 PMCID: PMC9666452 DOI: 10.1038/s41396-022-01307-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Revised: 08/04/2022] [Accepted: 08/09/2022] [Indexed: 12/15/2022]
Abstract
In the nitrogen-limited subtropical gyres, diazotrophic cyanobacteria, including Crocosphaera, provide an essential ecosystem service by converting dinitrogen (N2) gas into ammonia to support primary production in these oligotrophic regimes. Natural gradients of phosphorus (P) and iron (Fe) availability in the low-latitude oceans constrain the biogeography and activity of diazotrophs with important implications for marine biogeochemical cycling. Much remains unknown regarding Crocosphaera's physiological and molecular responses to multiple nutrient limitations. We cultured C. watsonii under Fe, P, and Fe/P (co)-limiting scenarios to link cellular physiology with diel gene expression and observed unique physiological and transcriptional profiles for each treatment. Counterintuitively, reduced growth and N2 fixation resource use efficiencies (RUEs) for Fe or P under P limitation were alleviated under Fe/P co-limitation. Differential gene expression analyses show that Fe/P co-limited cells employ the same responses as single-nutrient limited cells that reduce cellular nutrient requirements and increase responsiveness to environmental change including smaller cell size, protein turnover (Fe-limited), and upregulation of environmental sense-and-respond systems (P-limited). Combined, these mechanisms enhance growth and RUEs in Fe/P co-limited cells. These findings are important to our understanding of nutrient controls on N2 fixation and the implications for primary productivity and microbial dynamics in a changing ocean.
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Affiliation(s)
- Nina Yang
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
| | - Yu-An Lin
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
| | - Carlin A Merkel
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
| | - Michelle A DeMers
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
| | - Ping-Ping Qu
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
- Department of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA, USA
| | - Eric A Webb
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
| | - Fei-Xue Fu
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA
| | - David A Hutchins
- Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA.
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11
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Ou R, Cai L, Qiu J, Huang H, Ou D, Li W, Lin F, He X, Wang L, Wu R. Simulation Experiment of Environmental Impact of Deep-Sea Mining: Response of Phytoplankton Community to Polymetallic Nodules and Sediment Enrichment in Surface Water. TOXICS 2022; 10:610. [PMID: 36287890 PMCID: PMC9608977 DOI: 10.3390/toxics10100610] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Revised: 10/08/2022] [Accepted: 10/12/2022] [Indexed: 06/16/2023]
Abstract
In this paper, simulation experiments were conducted to study the response of phytoplankton biomass and community composition to the influence of polymetallic nodules and sediment at four stations in the western Pacific in 2021. Chlorophyll a, pico-phytoplankton cell abundance, and metal concentration were measured before and after 24 h of deck incubation. The results show that there were three different patterns of response, namely, restrained, stimulated, and unaffected patterns. The restrained pattern appeared in the filtered treatments at station Incub.01, and the stimulated pattern appeared in the unfiltered treatments at station Incub.02. The response of the phytoplankton was not detectable at stations Incub.03 and 04. Regardless, positive and negative responses were found in the dominant pico-phytoplankton group-Prochlorococcus-and with slight variation in Synechococcus. The concentration of manganese varied among the treatments compared to that of iron and other metals. The factors affecting the growth of the phytoplankton in this study were metal concentrations and turbidity. The phytoplankton biomass baseline may also have played an important role: the lower the biomass, the higher the growth rate. This study proved that deep-sea polymetallic nodule mining will have a specific impact on surface phytoplankton biomass, but turbidity and particle retention time could be important factors in mitigating the extent of the impact.
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Affiliation(s)
- Rimei Ou
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
- College of Marine Sciences, Shanghai Ocean University, Shanghai 201306, China
| | - Lei Cai
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Jinli Qiu
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Hao Huang
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Danyun Ou
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Weiwen Li
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Fanyu Lin
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Xuebao He
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Lei Wang
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
| | - Risheng Wu
- Third Institute of Oceanography, Ministry of Natural Resources P.R.C., Xiamen 361005, China
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12
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Kochoni E, Doose C, Gonzalez P, Fortin C. Role of iron in gene expression and in the modulation of copper uptake in a freshwater alga: Insights on Cu and Fe assimilation pathways. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 305:119311. [PMID: 35439593 DOI: 10.1016/j.envpol.2022.119311] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 02/21/2022] [Accepted: 04/12/2022] [Indexed: 06/14/2023]
Abstract
Metal uptake and toxicity can generally be related to its aqueous speciation and to the presence of competitive ions as described by the biotic ligand model. Beyond these simple chemical interactions at the surface of aquatic organisms, several internal biological feedback mechanisms can also modulate metal uptake. This is particularly important for essential elements for which specific transport systems were developed over the course of evolution. Based on the results of short-term Cu2+ uptake experiments and on the analysis of the expression of certain genes involved in Cu and Fe homeostasis, we studied the effects of Fe3+ on Cu2+ uptake by the freshwater green alga Chlamydomonas reinhardtii. We observed a significant increase in Cu2+ uptake rate in algal cells acclimated to a low Fe3+ medium up to 4.7 times greater compared to non-acclimated algal cells. The overexpression of the ferroxidase FOX1 and permease FTR1 genes suggests an activation of the high affinity Fe3+ assimilation system, which could constitute a plausible explanation for the increase in Cu2+ uptake rate in acclimatized algae. We show that Fe availability can have a significant impact on Cu uptake. Our observations reinforce the importance of considering physiological factors to better predict metal bioavailability.
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Affiliation(s)
- Emeric Kochoni
- EcotoQ, Institut National de la Recherche Scientifique, Centre Eau Terre Environnement, 490 de la Couronne, Québec, QC, G1K 9A9, Canada
| | - Caroline Doose
- Laboratoire de Biologie des Organismes et des écosystèmes Aquatiques, Muséum National d'Histoire Naturelle, Station Marine Concarneau, 29900, Concarneau, France
| | - Patrice Gonzalez
- Université de Bordeaux, CNRS, EPOC, EPHE, UMR 5805, 33600, Pessac, France
| | - Claude Fortin
- EcotoQ, Institut National de la Recherche Scientifique, Centre Eau Terre Environnement, 490 de la Couronne, Québec, QC, G1K 9A9, Canada.
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13
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Goswami P, He K, Li J, Pan Y, Roberts AP, Lin W. Magnetotactic bacteria and magnetofossils: ecology, evolution and environmental implications. NPJ Biofilms Microbiomes 2022; 8:43. [PMID: 35650214 PMCID: PMC9160268 DOI: 10.1038/s41522-022-00304-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Accepted: 05/04/2022] [Indexed: 11/08/2022] Open
Abstract
Magnetotactic bacteria (MTB) are a group of phylogenetically diverse and morphologically varied microorganisms with a magnetoresponsive capability called magnetotaxis or microbial magnetoreception. MTB are a distinctive constituent of the microbiome of aquatic ecosystems because they use Earth's magnetic field to align themselves in a north or south facing direction and efficiently navigate to their favored microenvironments. They have been identified worldwide from diverse aquatic and waterlogged microbiomes, including freshwater, saline, brackish and marine ecosystems, and some extreme environments. MTB play important roles in the biogeochemical cycling of iron, sulphur, phosphorus, carbon and nitrogen in nature and have been recognized from in vitro cultures to sequester heavy metals like selenium, cadmium, and tellurium, which makes them prospective candidate organisms for aquatic pollution bioremediation. The role of MTB in environmental systems is not limited to their lifespan; after death, fossil magnetosomal magnetic nanoparticles (known as magnetofossils) are a promising proxy for recording paleoenvironmental change and geomagnetic field history. Here, we summarize the ecology, evolution, and environmental function of MTB and the paleoenvironmental implications of magnetofossils in light of recent discoveries.
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Affiliation(s)
- Pranami Goswami
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, 100029, Beijing, China
- France-China Joint Laboratory for Evolution and Development of Magnetotactic Multicellular Organisms, Chinese Academy of Sciences, 100029, Beijing, China
- College of Earth and Planetary Sciences, University of Chinese Academy of Sciences, 100049, Beijing, China
- Research School of Earth Sciences, Australian National University, ACT, Canberra, ACT, 2601, Australia
| | - Kuang He
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, 100029, Beijing, China
- France-China Joint Laboratory for Evolution and Development of Magnetotactic Multicellular Organisms, Chinese Academy of Sciences, 100029, Beijing, China
- Frontiers Science Center for Deep Ocean Multispheres and Earth System, Key Laboratory of Submarine Geosciences and Prospecting Techniques, MoE and College of Marine Geosciences, Ocean University of China, 266100, Qingdao, China
| | - Jinhua Li
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, 100029, Beijing, China
- France-China Joint Laboratory for Evolution and Development of Magnetotactic Multicellular Organisms, Chinese Academy of Sciences, 100029, Beijing, China
| | - Yongxin Pan
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, 100029, Beijing, China
- France-China Joint Laboratory for Evolution and Development of Magnetotactic Multicellular Organisms, Chinese Academy of Sciences, 100029, Beijing, China
- College of Earth and Planetary Sciences, University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Andrew P Roberts
- Research School of Earth Sciences, Australian National University, ACT, Canberra, ACT, 2601, Australia.
| | - Wei Lin
- Key Laboratory of Earth and Planetary Physics, Institute of Geology and Geophysics, Chinese Academy of Sciences, 100029, Beijing, China.
- France-China Joint Laboratory for Evolution and Development of Magnetotactic Multicellular Organisms, Chinese Academy of Sciences, 100029, Beijing, China.
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14
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Morris JJ, Rose AL, Lu Z. Reactive oxygen species in the world ocean and their impacts on marine ecosystems. Redox Biol 2022; 52:102285. [PMID: 35364435 PMCID: PMC8972015 DOI: 10.1016/j.redox.2022.102285] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2021] [Revised: 03/07/2022] [Accepted: 03/10/2022] [Indexed: 11/17/2022] Open
Abstract
Reactive oxygen species (ROS) are omnipresent in the ocean, originating from both biological (e.g., unbalanced metabolism or stress) and non-biological processes (e.g. photooxidation of colored dissolved organic matter). ROS can directly affect the growth of marine organisms, and can also influence marine biogeochemistry, thus indirectly impacting the availability of nutrients and food sources. Microbial communities and evolution are shaped by marine ROS, and in turn microorganisms influence steady-state ROS concentrations by acting as the predominant sink for marine ROS. Through their interactions with trace metals and organic matter, ROS can enhance microbial growth, but ROS can also attack biological macromolecules, causing extensive modifications with deleterious results. Several biogeochemically important taxa are vulnerable to very low ROS concentrations within the ranges measured in situ, including the globally distributed marine cyanobacterium Prochlorococcus and ammonia-oxidizing archaea of the phylum Thaumarchaeota. Finally, climate change may increase the amount of ROS in the ocean, especially in the most productive surface layers. In this review, we explore the sources of ROS and their roles in the oceans, how the dynamics of ROS might change in the future, and how this change might impact the ecology and chemistry of the future ocean.
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Affiliation(s)
- J Jeffrey Morris
- Department of Biology, University of Alabama at Birmingham, Birmingham, AL, USA.
| | - Andrew L Rose
- Faculty of Science and Engineering, Southern Cross University, New South Wales, Australia
| | - Zhiying Lu
- Department of Biology, University of Alabama at Birmingham, Birmingham, AL, USA.
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15
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Kochoni E, Aharchaou I, Ohlund L, Rosabal M, Sleno L, Fortin C. New insights in copper handling strategies in the green alga Chlamydomonas reinhardtii under low-iron condition. Metallomics 2022; 14:6582230. [PMID: 35524697 DOI: 10.1093/mtomcs/mfac033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Accepted: 04/14/2022] [Indexed: 11/13/2022]
Abstract
Copper (Cu) is a redox-active transition element critical to various metabolic processes. These functions are accomplished in tandem with Cu binding ligands, mainly proteins. The main goal of this work was to understand the mechanisms that govern the intracellular fate of Cu in the freshwater green alga, Chlamydomonas reinhardtii, and more specifically to understand the mechanisms underlying Cu detoxification by algal cells in low-Fe conditions. We show that Cu accumulation was up to 51-fold greater for algae exposed to Cu in low-Fe medium as compared to the replete-Fe growth medium. Using the stable isotope 65Cu as a tracer, we studied the subcellular distribution of Cu within the various cell compartments of C. reinhardtii. These data were coupled with metallomic and proteomic approaches to identify potential Cu-binding ligands in the heat-stable protein and peptide fractions of the cytosol. Cu was mostly found in the organelles (78%), and in the heat-stable proteins and peptides (21%) fractions. The organelle fraction appeared to also be the main target compartment of Cu accumulation in Fe-depleted cells. As Fe levels in the medium were shown to influence Cu homeostasis, we found that C. reinhardtii can cope with this additional stress by utilizing different Cu-binding ligands. Indeed, in addition to expected Cu-binding ligands such as glutathione and phytochelatins, 25 proteins were detected that may also play a role in the Cu detoxification processes in C. reinhardtii. Our results shed new light on the coping mechanisms of C. reinhardtii when exposed to environmental conditions that induce high rates of Cu accumulation.
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Affiliation(s)
- Emeric Kochoni
- Institut national de la recherche scientifique, Centre Eau Terre Environnement, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada.,EcotoQ, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada
| | - Imad Aharchaou
- Institut national de la recherche scientifique, Centre Eau Terre Environnement, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada.,EcotoQ, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada
| | - Leanne Ohlund
- Département de Chimie, Université du Québec à Montréal (UQAM), 2101, rue Jeanne-Mance, Montréal, QC, H2×2J6, Canada
| | - Maikel Rosabal
- EcotoQ, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada.,Département des Sciences biologiques, Université du Québec à Montréal (UQAM), 141 Avenue du Président-Kennedy, Montréal, QC, H2×1Y4, Canada
| | - Lekha Sleno
- EcotoQ, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada.,Département de Chimie, Université du Québec à Montréal (UQAM), 2101, rue Jeanne-Mance, Montréal, QC, H2×2J6, Canada
| | - Claude Fortin
- Institut national de la recherche scientifique, Centre Eau Terre Environnement, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada.,EcotoQ, 490, rue de la Couronne, Québec, QC, G1K 9A9, Canada
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16
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Chen H, Shen X, Ying Y, Li X, Chen L, Shen C, Wen Y. Effect of trace elements in the toxicity of copper to Chlamydomonas reinhardtii. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2022; 24:576-585. [PMID: 35266473 DOI: 10.1039/d1em00521a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Copper sulfate (CuSO4) is widely used in the control of algal blooms. Cu can promote or inhibit algal growth, while also affecting trace element uptake, therefore, the response mechanisms of algae cells under Cu2+ interference should be studied. In this study, wild-type Chlamydomonas reinhardtii (C. reinhardtii) and wall-less mutant C. reinhardtii were selected as the research objects. Except for the cell wall, these two algae were physiologically the same. While manipulating the concentration of Cu, the accumulation of Cu, Fe, Zn, and Mn by the two algal cell types was studied. The cell wall hindered the accumulation of Cu by cells and alleviated the toxicity of Cu to C. reinhardtii. The addition of Cu increased the accumulation of Fe by both cell types. In an environment with excess Cu, the total amount of Zn and Mn accumulated by cells also increased. On the one hand, this may be due to the synergistic and antagonistic effects of trace elements in the adsorption and uptake process, and on the other hand, it may be due to the changes in metal speciation in the culture medium. In addition, the difference in the total accumulation of various trace elements between wild-type and wall-less-type C. reinhardtii may be due to the structure and function differences between cell wall and cell membrane. At the same time, by measuring the changes in the levels of glutathione (GSH) in algal cells, the relevant mechanisms underlying the algae's uptake of trace elements by algae were further explored.
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Affiliation(s)
- Hui Chen
- College of Science and Technology, Ningbo University, Cixi 315302, China
| | - Xin Shen
- College of Science and Technology, Ningbo University, Cixi 315302, China
| | - Yiping Ying
- College of Science and Technology, Ningbo University, Cixi 315302, China
| | - Xiang Li
- College of Science and Technology, Ningbo University, Cixi 315302, China
| | - Lili Chen
- College of Science and Technology, Ningbo University, Cixi 315302, China
| | - Chensi Shen
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Yuezhong Wen
- Key Laboratory of Pollution Exposure and Health Intervention of Zhejiang Province, Interdisciplinary Research Academy (IRA), Zhejiang Shuren University, Hangzhou 310015, China.
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17
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Iron and manganese co-limit the growth of two phytoplankton groups dominant at two locations of the Drake Passage. Commun Biol 2022; 5:207. [PMID: 35246600 PMCID: PMC8897415 DOI: 10.1038/s42003-022-03148-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Accepted: 02/07/2022] [Indexed: 11/14/2022] Open
Abstract
While it has been recently demonstrated that both iron (Fe) and manganese (Mn) control Southern Ocean (SO) plankton biomass, how in particular Mn governs phytoplankton species composition remains yet unclear. This study, for the first time, highlights the importance of Mn next to Fe for growth of two key SO phytoplankton groups at two locations in the Drake Passage (West and East). Even though the bulk parameter chlorophyll a indicated Fe availability as main driver of both phytoplankton assemblages, the flow cytometric and microscopic analysis revealed FeMn co-limitation of a key phytoplankton group at each location: at West the dominant diatom Fragilariopsis and one subgroup of picoeukaryotes, which numerically dominated the East community. Hence, the limitation by both Fe and Mn and their divergent requirements among phytoplankton species and groups can be a key factor for shaping SO phytoplankton community structure. Iron and manganese play an important role in phytoplankton biomass control, but the exact effect of these elements on species composition has remained unknown. Conducting phytoplankton incubation experiments at two Drake Passage sites, we demonstrate how iron and manganese regulate phytoplankton community structure.
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18
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Bonecker ACT, Menezes BS, Dias Junior C, Silva CAD, Ancona CM, Dias CDO, Longhini CM, Costa ES, Sá F, Lázaro GCS, Mill GN, Rocha GM, Lemos KDN, da Conceição LR, Demoner LE, Fernandes LFL, Castro MSD, Alves MM, Laino PDS, Auer PPB, Cagnin RC, Ghisolfi RD, Neto RR, Bonecker SLC. An integrated study of the plankton community after four years of Fundão dam disaster. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 806:150613. [PMID: 34648830 DOI: 10.1016/j.scitotenv.2021.150613] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 09/12/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
Mining activities can affect the environment either by the tailings releasing or dams failures. The impact of the tailings can last decades and cause chronic effects due to their toxicity. The Fundão dam collapse, a relevant environmental disaster, occurred in November 2015 in Southeastern Brazil. Tailing rich in metals reached the Doce River and arrived in the Atlantic Ocean. Previous studies revealed the acute impact of the tailings in the marine planktonic community near the Doce River mouth. The current study aims to characterize the structure of planktonic assemblages in the impacted area after four years of the disaster. Sampling occurred in November 2018, January, April, and July 2019 at 32 stations located at the marine coastal area near the Doce River mouth. Our study detected high metal concentrations in the surface waters during January 2019, when the lowest diversity and abundance of phytoplankton, lowest zooplankton diversity, and low ichthyoplankton abundance were recorded. The zooplanktonic community was structured by environmental parameters and ichthyoplankton assemblages in November 2018, January and April 2019. Nutrients and metals, mainly iron from the tailing carried by the Doce River waters to the marine environment changed the plankton community, confirming the impact of the Fundão Dam collapse in the coastal area near the Doce River mouth. The phytoplankton community, influenced by the nutrients and to a lesser extent metals concentrations, was not decisive in the zooplankton community structure. The environmental variability was driven by the meteoceanographic conditions and the Doce River flow. There was a high correlation between the zooplanktonic community and ichthyoplanktonic assemblage and the environmental factors and metals. These relations indicate the impact of the tailings from the collapse of the Fundão Dam on these communities, even after four years of the Mariana disaster.
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Affiliation(s)
- Ana Cristina Teixeira Bonecker
- Universidade Federal do Rio de Janeiro, Instituto de Biologia, Departamento de Zoologia, Avenida Prof. Rodolpho Rocco, 211, Prédio do CCS, Bloco A, Sala A0-084, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil.
| | - Bárbara Santos Menezes
- Universidade Federal do Rio de Janeiro, Instituto de Biologia, Departamento de Zoologia, Avenida Prof. Rodolpho Rocco, 211, Prédio do CCS, Bloco A, Sala A0-084, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil; Universidade Federal do Rio de Janeiro, Centro de Tecnologia, Escola Politécnica, Programa de Engenharia Ambiental-PEA, Avenida Athos da Silveira Ramos, 149, Bl. A, 2 andar, Sala DAPG, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil
| | - Camilo Dias Junior
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Cesar Alexandro da Silva
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Cintia Maria Ancona
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Cristina de Oliveira Dias
- Universidade Federal do Rio de Janeiro, Instituto de Biologia, Departamento de Zoologia, Avenida Prof. Rodolpho Rocco, 211, Prédio do CCS, Bloco A, Sala A0-084, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil; Universidade Federal do Rio de Janeiro, Centro de Tecnologia, Escola Politécnica, Programa de Engenharia Ambiental-PEA, Avenida Athos da Silveira Ramos, 149, Bl. A, 2 andar, Sala DAPG, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil
| | - Cybelle Menolli Longhini
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Eduardo Schettini Costa
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Fabian Sá
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Georgette Cristina Salvador Lázaro
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Guilherme Nogueira Mill
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Gustavo Martins Rocha
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Kassia do Nascimento Lemos
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Laura Rodrigues da Conceição
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Lilian Elisa Demoner
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Luiz Fernando Loureiro Fernandes
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Márcia Salustiano de Castro
- Universidade Federal do Rio de Janeiro, Instituto de Biologia, Departamento de Zoologia, Avenida Prof. Rodolpho Rocco, 211, Prédio do CCS, Bloco A, Sala A0-084, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil; Universidade Federal do Rio de Janeiro, Centro de Tecnologia, Escola Politécnica, Programa de Engenharia Ambiental-PEA, Avenida Athos da Silveira Ramos, 149, Bl. A, 2 andar, Sala DAPG, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil
| | - Mariana Magnago Alves
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Pedro de Souza Laino
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Pollyanna Pereira Borgo Auer
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Renata Caiado Cagnin
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Renato David Ghisolfi
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Renato Rodrigues Neto
- Universidade Federal do Espírito Santo, Departamento de Oceanografia e Ecologia, Av. Fernando Ferrari 514, Vitória, Espírito Santo, Brazil
| | - Sérgio Luiz Costa Bonecker
- Universidade Federal do Rio de Janeiro, Instituto de Biologia, Departamento de Zoologia, Avenida Prof. Rodolpho Rocco, 211, Prédio do CCS, Bloco A, Sala A0-084, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil; Universidade Federal do Rio de Janeiro, Centro de Tecnologia, Escola Politécnica, Programa de Engenharia Ambiental-PEA, Avenida Athos da Silveira Ramos, 149, Bl. A, 2 andar, Sala DAPG, Ilha do Fundão, 21941-909 Rio de Janeiro, RJ, Brazil
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19
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Dengg M, Stirling CH, Reid MR, Verburg P, Armstrong E, Kelly LT, Wood SA. Growth at the limits: comparing trace metal limitation of a freshwater cyanobacterium (Dolichospermum lemmermannii) and a freshwater diatom (Fragilaria crotonensis). Sci Rep 2022; 12:467. [PMID: 35013511 PMCID: PMC8748459 DOI: 10.1038/s41598-021-04533-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Accepted: 12/16/2021] [Indexed: 12/04/2022] Open
Abstract
Freshwater phytoplankton blooms are increasing in prevalence and there are conflicting views on whether trace metals limit growth of key species and thus bloom formation. The Taupō Volcanic Zone (TVZ), New Zealand, was formed by multiple eruptions of a super-volcano which emitted rhyolitic tephra leaving lakes depleted in trace metals. This provides an opportunity to test the potential of trace metal limitation on freshwater phytoplankton growth under nanomolar concentrations. Growth responses of two algal species isolated from Lake Taupō, Dolichospermum lemmermannii (cyanobacteria) and Fragilaria crotonensis (diatom), to six biologically important trace metals (manganese, iron, zinc, cobalt, copper and molybdenum) were examined in culture experiments. These were conducted at three trace metal concentrations: (1) ambient, (2) two-times ambient, and (3) ten-times ambient concentrations in Lake Taupō. Elevated concentrations of iron significantly increased growth rates and maximum cell densities in D. lemmermannii, whereas no significant concentration dependence was observed for other trace metals. Fragilaria crotonensis showed no significant growth response to elevated concentrations of trace metals. These results highlight the importance of iron as a growth limiting nutrient for cyanobacteria and indicate that even small (twofold) increases in Fe concentrations could enhance cyanobacteria growth rates in Lake Taupō, potentially causing cyanobacterial blooms.
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Affiliation(s)
- Markus Dengg
- Department of Geology and Centre for Trace Element Analysis, University of Otago, Dunedin, 9016, New Zealand.
| | - Claudine H Stirling
- Department of Geology and Centre for Trace Element Analysis, University of Otago, Dunedin, 9016, New Zealand
| | - Malcolm R Reid
- Department of Geology and Centre for Trace Element Analysis, University of Otago, Dunedin, 9016, New Zealand
| | - Piet Verburg
- National Institute of Water and Atmospheric Research (NIWA), Hamilton, 3251, New Zealand
| | - Evelyn Armstrong
- Department of Marine Science, NIWA/University of Otago Research Centre for Oceanography, University of Otago, Dunedin, 9010, New Zealand
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20
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Ayothi P, Muthu A, Shanmugam K. Iron and methyl jasmonate increase high-value PUFA production by elevating the expression of desaturase genes in marine microalga Isochrysis sp. J Appl Microbiol 2021; 132:2042-2053. [PMID: 34741377 DOI: 10.1111/jam.15356] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Revised: 11/01/2021] [Accepted: 11/02/2021] [Indexed: 11/29/2022]
Abstract
AIM This study investigated the effect of several metabolic enhancers on the expression of fatty acid biosynthetic genes and their influence on the production of high-value PUFA in the marine microalgae Isochrysis sp., CASA CC 101. METHODS AND RESULTS The effect of the presence of iron (Fe), nicotinic acid (NIC), methyl jasmonate (MJ) and thidiazuron (TDZ) on the expression of the fatty acid desaturase genes Δ6Des, Δ5Des and Δ4Des was studied in cultures of the marine microalga Isochrysis sp., CASA CC 101. The production of high-value PUFA like γ-linolenic acid (GLA), eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) was correlated with these gene expressions. The results showed that MJ, Fe and TDZ significantly increased the lipid content than the control. MJ specifically up-regulated ∆6Des gene expression and thereby increased GLA production. Whereas Fe specifically increased ∆5Des gene expression and thereby increased EPA production. However, Fe and TDZ-treated cells effectively upregulated the expression of ∆4Des and increased the production of DHA when compared with control cells. CONCLUSIONS Our findings suggest that addition of Fe and MJ in the culture medium triggers the expression of PUFA biosynthetic genes, especially ∆6Des and ∆4Des, in marine microalga Isochrysis sp., CASA CC 101 their presence resulted in increased production of the PUFAs GLA, EPA and DHA. SIGNIFICANCE AND IMPACT OF THE STUDY This study shows that the addition of Fe and MJ to the culture media of Isochrysis sp., CASA CC 101 results in up-regulation of its genes Δ4Des, Δ6Des and Δ5Des, and improves the production of PUFA. Therefore, the addition of Fe and MJ to the culture medium is useful to increase the production of high-value PUFA in Isochrysis sp., CASA CC 101 and also to the other micro algal species.
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Affiliation(s)
- Parthasarathy Ayothi
- Department of Molecular Biology, School of Biological Sciences, Madurai Kamaraj University, Tamil Nadu, Madurai, India
| | - Arumugam Muthu
- National Institute for Interdisciplinary Science and Technology (NIIST), Council of Scientific & Industrial Research (CSIR), Industrial Estate PO, Thiruvananthapuram, Kerala, India
| | - Kathiresan Shanmugam
- Department of Life Sciences, School of Life Sciences, Central University of Tamil Nadu, Thiruvarur, Tamil Nadu, India
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21
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Gong B, He E, Romero-Freire A, Ruan J, Yang W, Zhang P, Qiu H. Do essential elements (P and Fe) have mitigation roles in the toxicity of individual and binary mixture of yttrium and cerium to Triticum aestivum? JOURNAL OF HAZARDOUS MATERIALS 2021; 416:125761. [PMID: 33819642 DOI: 10.1016/j.jhazmat.2021.125761] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 03/10/2021] [Accepted: 03/23/2021] [Indexed: 06/12/2023]
Abstract
Essential elements can affect the bioavailability, uptake, and toxicity of metals. However, hardly any research has focused on the roles of essential elements on the toxicity of rare earth metals. Here we examined how P and Fe modified the individual and binary toxicity of Y and Ce to Triticum aestivum, respectively. Standard root elongation tests were used to quantify the toxicity of both single and binary mixtures at three levels of P addition (1, 5, and 10 μM) and Fe addition (0.1, 1, and 5 mM). Our results showed that both P and Fe can alleviate individual toxicity of Y or Ce irrespective of the dose indicators as suggested by the enhanced EC50 values. Both P and Fe might mitigate Y/Ce toxicity by limiting Y/Ce uptake into roots and improving nutritional status of wheats, whereas P can also decrease free Y/Ce ion activities in the exposure media. As for the mixture toxicity of Y and Ce, only improved P, but not Fe can exhibit approximately additive mixture toxicity, which can be adequately predicted by the simple Concentration Addition model. Our results suggested the important roles of P and Fe in assessing Y and Ce toxicity accurately.
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Affiliation(s)
- Bing Gong
- School of Geographic Sciences, East China Normal University, Shanghai 200241, China; School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Erkai He
- School of Geographic Sciences, East China Normal University, Shanghai 200241, China; Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou 510006, China.
| | - Ana Romero-Freire
- Department of Soil Science, University of Granada, Avd. Fuente Nueva, Granada 18002, Spain
| | - Jujun Ruan
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou 510006, China; School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China
| | - Wenjun Yang
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou 510006, China; School of Environmental Science and Engineering, Sun Yat-sen University, Guangzhou 510006, China
| | - Peihua Zhang
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Hao Qiu
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China
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22
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Ansari AA, Ansari AA, Abouhend AS, Gikonyo JG, Park C. Photogranulation in a Hydrostatic Environment Occurs with Limitation of Iron. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:10672-10683. [PMID: 34255495 DOI: 10.1021/acs.est.0c07374] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Filamentous cyanobacteria are an essential element of oxygenic photogranules for granule-based wastewater treatment with photosynthetic aeration. Currently, mechanisms for the selection of this microbial group and their development in the granular structure are not well understood. Here, we studied the characteristics and fate of iron in photogranulation that proceeds in a hydrostatic environment with an activated sludge (AS) inoculum. We found that the level of Fe in bulk liquids (FeBL) sharply increased due to the decay of the inoculum but quickly diminished along with the bloom of microalgae and the advent of the oxic environment. Iron linked with extracellular polymeric substances (FeEPS) continued to decline but reached steady low values, which occurred along with the appearance of granular structure. Strong negative correlations were found between FeEPS and the pigments specific for cyanobacteria. Spectroscopies revealed the presence of amorphous ferric oxides in pellet biomass, which seemed to remain unaltered during the photogranulation process. These results suggest that the availability of FeEPS in AS inoculums-after algal bloom-selects cyanobacteria, and the limitation of this Fe pool becomes an important driver for cyanobacteria to granulate in a hydrostatic environment. We therefore propose that the availability of iron has a strong influence on the photogranulation process.
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Affiliation(s)
- Abeera A Ansari
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, Amherst, Massachusetts 01003, United States
- U.S.-Pakistan Center for Advanced Studies in Energy (USPCAS-E), National University of Sciences and Technology (NUST), H-12 Sector, 44000 Islamabad , Pakistan
| | - Arfa A Ansari
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, Amherst, Massachusetts 01003, United States
| | - Ahmed S Abouhend
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, Amherst, Massachusetts 01003, United States
| | - Joseph G Gikonyo
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, Amherst, Massachusetts 01003, United States
| | - Chul Park
- Department of Civil and Environmental Engineering, University of Massachusetts, Amherst, Amherst, Massachusetts 01003, United States
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23
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Ipek Y, Jeyasingh PD. Growth and ionomic responses of a freshwater cyanobacterium to supplies of nitrogen and iron. HARMFUL ALGAE 2021; 108:102078. [PMID: 34588115 DOI: 10.1016/j.hal.2021.102078] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 06/16/2021] [Accepted: 06/29/2021] [Indexed: 06/13/2023]
Abstract
Cyanobacterial harmful algal blooms (HABs) are increasing in frequency and magnitude worldwide. A number of parameters are thought to underlie HABs, including the ratio at which two key elements, nitrogen (N) and phosphorus (P) are supplied, although a predictive understanding eludes us. While the physiological importance of iron (Fe) in electron transport and N-fixation is well known, relatively little is known about its impacts on the growth of freshwater cyanobacteria. Moreover, there is growing appreciation for correlated changes in the quotas of multiple elements encompassing an organism (i.e. the ionome) when the supply of one element changes, indicating that growth differences arise from complex biochemical adjustments rather than limitation of a key anabolic process by a single element. In this study, the effects of supply N:P and Fe on the growth and ionome of Dolichospermum, a nitrogen-fixing cyanobacterium found in freshwater ecosystems, were examined. Changes in both supply N:P and Fe had significant effects on yield. Consistent with prior observations, cyanobacterial growth was higher at N:P = 20, compared to N:P = 5, and quotas of all elements decreased with growth. Yield was negatively related with the degree of imbalance between dissolved supply and intracellular concentrations of not only N and Fe, but also multiple other elements. Changes in Fe supply had a significant effect on yield in N-limited conditions (N:P = 5). Again, ionome-wide imbalances decreased yield. Together, these results indicate that attention to multiple elements encompassing the ionome of a HAB-forming taxon, and the supplies of such elements may help improve the ability to forecast blooms. Such elemental interactions may be critical as limnologists begin to appreciate the staggering variation in the supplies of such elements among lakes, and anthropogenic activities continue to alter global biogeochemical cycles.
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Affiliation(s)
- Yetkin Ipek
- Oklahoma State University, Department of Integrative Biology 501 Life Sciences West Stillwater, OK 74078, United States.
| | - Punidan D Jeyasingh
- Oklahoma State University, Department of Integrative Biology 501 Life Sciences West Stillwater, OK 74078, United States.
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24
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Molecular underpinnings and biogeochemical consequences of enhanced diatom growth in a warming Southern Ocean. Proc Natl Acad Sci U S A 2021; 118:2107238118. [PMID: 34301906 PMCID: PMC8325266 DOI: 10.1073/pnas.2107238118] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Phytoplankton contribute to the Southern Ocean’s (SO) ability to absorb atmospheric CO2 and shape the stoichiometry of northward macronutrient delivery. Climate change is altering the SO environment, yet we know little about how resident phytoplankton will react to these changes. Here, we studied a natural SO community and compared responses of two prevalent, bloom-forming diatom groups to changes in temperature and iron that are projected to occur by 2100 to 2300. We found that one group, Pseudo-nitzschia, grows better under warmer low-iron conditions by managing cellular iron demand and efficiently increasing photosynthetic capacity. This ability to grow and draw down nutrients in the face of warming, regardless of iron availability, has major implications for ocean ecosystems and global nutrient cycles. The Southern Ocean (SO) harbors some of the most intense phytoplankton blooms on Earth. Changes in temperature and iron availability are expected to alter the intensity of SO phytoplankton blooms, but little is known about how these changes will influence community composition and downstream biogeochemical processes. We performed light-saturated experimental manipulations on surface ocean microbial communities from McMurdo Sound in the Ross Sea to examine the effects of increased iron availability (+2 nM) and warming (+3 and +6 °C) on nutrient uptake, as well as the growth and transcriptional responses of two dominant diatoms, Fragilariopsis and Pseudo-nitzschia. We found that community nutrient uptake and primary productivity were elevated under both warming conditions without iron addition (relative to ambient −0.5 °C). This effect was greater than additive under concurrent iron addition and warming. Pseudo-nitzschia became more abundant under warming without added iron (especially at 6 °C), while Fragilariopsis only became more abundant under warming in the iron-added treatments. We attribute the apparent advantage Pseudo-nitzschia shows under warming to up-regulation of iron-conserving photosynthetic processes, utilization of iron-economic nitrogen assimilation mechanisms, and increased iron uptake and storage. These data identify important molecular and physiological differences between dominant diatom groups and add to the growing body of evidence for Pseudo-nitzschia’s increasingly important role in warming SO ecosystems. This study also suggests that temperature-driven shifts in SO phytoplankton assemblages may increase utilization of the vast pool of excess nutrients in iron-limited SO surface waters and thereby influence global nutrient distribution and carbon cycling.
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25
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Baker AR, Kanakidou M, Nenes A, Myriokefalitakis S, Croot PL, Duce RA, Gao Y, Guieu C, Ito A, Jickells TD, Mahowald NM, Middag R, Perron MMG, Sarin MM, Shelley R, Turner DR. Changing atmospheric acidity as a modulator of nutrient deposition and ocean biogeochemistry. SCIENCE ADVANCES 2021; 7:7/28/eabd8800. [PMID: 34233872 PMCID: PMC8262812 DOI: 10.1126/sciadv.abd8800] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Accepted: 05/21/2021] [Indexed: 05/14/2023]
Abstract
Anthropogenic emissions to the atmosphere have increased the flux of nutrients, especially nitrogen, to the ocean, but they have also altered the acidity of aerosol, cloud water, and precipitation over much of the marine atmosphere. For nitrogen, acidity-driven changes in chemical speciation result in altered partitioning between the gas and particulate phases that subsequently affect long-range transport. Other important nutrients, notably iron and phosphorus, are affected, because their soluble fractions increase upon exposure to acidic environments during atmospheric transport. These changes affect the magnitude, distribution, and deposition mode of individual nutrients supplied to the ocean, the extent to which nutrient deposition interacts with the sea surface microlayer during its passage into bulk seawater, and the relative abundances of soluble nutrients in atmospheric deposition. Atmospheric acidity change therefore affects ecosystem composition, in addition to overall marine productivity, and these effects will continue to evolve with changing anthropogenic emissions in the future.
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Affiliation(s)
- Alex R Baker
- Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK.
| | - Maria Kanakidou
- Environmental Chemical Processes Laboratory (ECPL), Department of Chemistry, University of Crete, Heraklion, Greece
- Center of Studies of Air quality and Climate Change, Institute for Chemical Engineering Sciences, Foundation for Research and Technology Hellas, Patras, Greece
- Excellence Chair, Institute of Environmental Physics, University of Bremen, Bremen, Germany
| | - Athanasios Nenes
- Center of Studies of Air quality and Climate Change, Institute for Chemical Engineering Sciences, Foundation for Research and Technology Hellas, Patras, Greece
- Laboratory of Atmospheric Processes and their Impacts (LAPI), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Stelios Myriokefalitakis
- Institute for Environmental Research and Sustainable Development (IERSD), National Observatory of Athens (NOA), GR-15236 Palea Penteli, Greece
| | - Peter L Croot
- iCRAG (Irish Centre for Research in Applied Geoscience), Earth and Ocean Sciences, School of Natural Sciences and Ryan Institute, National University of Ireland Galway, Galway, Ireland
| | - Robert A Duce
- Departments of Oceanography and Atmospheric Sciences, Texas A&M University, College Station, TX, USA
| | - Yuan Gao
- Department of Earth and Environmental Sciences, Rutgers University, Newark, USA
| | - Cécile Guieu
- Sorbonne Université, CNRS, Laboratoire d'Océanographie de Villefranche (LOV), Villefranche sur Mer, France
| | - Akinori Ito
- Yokohama Institute for Earth Sciences, JAMSTEC, Yokohama, Kanagawa, Japan
| | - Tim D Jickells
- Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
| | - Natalie M Mahowald
- Department of Earth and Atmospheric Sciences, Cornell University, Ithaca NY, USA
| | - Rob Middag
- Department of Ocean Systems (OCS), Royal Netherlands Institute for Sea Research, P.O. Box 59, 1790 AB Den Burg, Texel, Netherlands
| | - Morgane M G Perron
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
| | - Manmohan M Sarin
- Geosciences Division, Physical Research Laboratory, Ahmedabad, India
| | - Rachel Shelley
- Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
- Department of Earth, Ocean and Atmospheric Science, Florida State University, Tallahassee, USA
| | - David R Turner
- Department of Marine Sciences, University of Gothenburg, Gothenburg, Sweden
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26
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Iron transport in cyanobacteria - from molecules to communities. Trends Microbiol 2021; 30:229-240. [PMID: 34175176 DOI: 10.1016/j.tim.2021.06.001] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 06/01/2021] [Accepted: 06/01/2021] [Indexed: 11/22/2022]
Abstract
Iron is an essential micronutrient for the ecologically important photoautotrophic cyanobacteria which are found across diverse aquatic environments. Low concentrations and poor bioavailability of certain iron species exert a strong control on cyanobacterial growth, affecting ecosystem structure and biogeochemical cycling. Here, we review the iron-acquisition pathways cyanobacteria utilize for overcoming these challenges. As the molecular details of cyanobacterial iron transport are being uncovered, an overall scheme of how cyanobacteria handle and exploit this scarce and redox-active micronutrient is emerging. Importantly, the range of biological solutions used by cyanobacteria to increase iron fluxes goes beyond transport and includes behavioral traits of colonial cyanobacteria and intricate cyanobacteria-bacteria interactions.
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27
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Wu N, Tong M, Gou S, Zeng W, Xu Z, Jiang T. Hemolytic Activity in Relation to the Photosynthetic System in Chattonella marina and Chattonella ovata. Mar Drugs 2021; 19:336. [PMID: 34204792 PMCID: PMC8231601 DOI: 10.3390/md19060336] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Revised: 06/07/2021] [Accepted: 06/09/2021] [Indexed: 11/16/2022] Open
Abstract
Chattonella species, C. marina and C. ovata, are harmful raphidophycean flagellates known to have hemolytic effects on many marine organisms and resulting in massive ecological damage worldwide. However, knowledge of the toxigenic mechanism of these ichthyotoxic flagellates is still limited. Light was reported to be responsible for the hemolytic activity (HA) of Chattonella species. Therefore, the response of photoprotective, photosynthetic accessory pigments, the photosystem II (PSII) electron transport chain, as well as HA were investigated in non-axenic C. marina and C. ovata cultures under variable environmental conditions (light, iron and addition of photosynthetic inhibitors). HA and hydrogen peroxide (H2O2) were quantified using erythrocytes and pHPA assay. Results confirmed that% HA of Chattonella was initiated by light, but was not always elicited during cell division. Exponential growth of C. marina and C. ovata under the light over 100 µmol m-2 s-1 or iron-sufficient conditions elicited high hemolytic activity. Inhibitors of PSII reduced the HA of C. marina, but had no effect on C. ovata. The toxicological response indicated that HA in Chattonella was not associated with the photoprotective system, i.e., xanthophyll cycle and regulation of reactive oxygen species, nor the PSII electron transport chain, but most likely occurred during energy transport through the light-harvesting antenna pigments. A positive, highly significant relationship between HA and chlorophyll (chl) biosynthesis pigments, especially chl c2 and chl a, in both species, indicated that hemolytic toxin may be generated during electron/energy transfer through the chl c2 biosynthesis pathway.
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Affiliation(s)
- Ni Wu
- Key Laboratory of Aquatic Eutrophication and Control of Harmful Algal Blooms of Guangdong Higher Education Institute, Research Center of Hydrobiology, Jinan University, Guangzhou 510632, China; (N.W.); (S.G.); (W.Z.)
- South China Sea Institute of Planning and Environmental Research, State Oceanic Administration, Guangzhou 510300, China
| | - Mengmeng Tong
- Ocean College, Zhejiang University, Zhoushan 316021, China;
| | - Siyu Gou
- Key Laboratory of Aquatic Eutrophication and Control of Harmful Algal Blooms of Guangdong Higher Education Institute, Research Center of Hydrobiology, Jinan University, Guangzhou 510632, China; (N.W.); (S.G.); (W.Z.)
| | - Weiji Zeng
- Key Laboratory of Aquatic Eutrophication and Control of Harmful Algal Blooms of Guangdong Higher Education Institute, Research Center of Hydrobiology, Jinan University, Guangzhou 510632, China; (N.W.); (S.G.); (W.Z.)
| | - Zhuoyun Xu
- Ocean College, Zhejiang University, Zhoushan 316021, China;
| | - Tianjiu Jiang
- Key Laboratory of Aquatic Eutrophication and Control of Harmful Algal Blooms of Guangdong Higher Education Institute, Research Center of Hydrobiology, Jinan University, Guangzhou 510632, China; (N.W.); (S.G.); (W.Z.)
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28
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Li B, Zhang X, Deng J, Cheng Y, Chen Z, Qin B, Tefsen B, Wells M. A new perspective of copper-iron effects on bloom-forming algae in a highly impacted environment. WATER RESEARCH 2021; 195:116889. [PMID: 33735628 DOI: 10.1016/j.watres.2021.116889] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Revised: 12/23/2020] [Accepted: 01/31/2021] [Indexed: 06/12/2023]
Abstract
Relatively little work has been done on the role of micronutrients in influencing development and progression of harmful algal blooms, yet micronutrients are ineluctably required for growth. Relatively small changes in micronutrient status have wide-ranging consequences. Here, we report results from mesocosm experiments with Microcystis and Desmodesmus spp., in mono- and mixed-cultures, to probe questions of how copper, iron, and copper-iron amendments affect growth, short-term assemblage progression, and production of siderophore, chalkophore, and microcystin in lake water from a large, hypereutrophic lake (Taihu, China). Our approach offers an entirely new perspective to understanding micronutrient dynamics in aqueous environments, as this is the first work to systematically screen for chalkophores and siderophores separately, as a function of copper/iron amendment, and using community trajectory analysis. Singular findings are summarized as follows: 1) unlike lab-based studies, in our work we observe neither dramatic copper-modulation of iron demand, nor evidence of an iron-protective effect from copper toxicity. 2) The interplay between chalkophore/siderophore production supports a concept model wherein Microcystis spp. varies behavior to individually and uniquely manage copper/iron requirements in a phased manner. In being able to specifically screen for chalkophores, we observe a previously unreported link between chalkophore and microcystin production that may relate to iron-limitation. 3) Regarding harmful algal bloom (HAB) persistance, the lake water itself influences mesocosm changes; differentiated effects for iron regarding growth indicators and/or reduction of Fe-limitation stress were found at an HAB-free field station (Xukou Bay), likely a consequence of low bioavailability of iron in this station as compared to HAB-impacted stations (half the initial dissolved iron concentration, persisting throughout experiments). The low dissolved iron accompanies more intense chalkophore/siderophore community trajectories.
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Affiliation(s)
- Boling Li
- Department of Environmental Science, University of Liverpool, Brownlow Hill, Liverpool L69 7ZX, United Kingdom; Department of Biological Sciences, Xi'an Jiaotong-Liverpool University, Suzhou, Jiangsu 215123, China
| | - Xiaokai Zhang
- Institute of Environmental Processes and Pollution Control, and School of Environmental and Civil Engineering, Jiangnan University, Wuxi 214122, China
| | - Jianming Deng
- Taihu Laboratory for Lake Ecosystem Research, State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yili Cheng
- Department of Health and Environmental Sciences, Xi'an Jiaotong-Liverpool University, Suzhou, Jiangsu 215123, China
| | - Zheng Chen
- Department of Health and Environmental Sciences, Xi'an Jiaotong-Liverpool University, Suzhou, Jiangsu 215123, China
| | - Boqiang Qin
- Taihu Laboratory for Lake Ecosystem Research, State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China
| | - Boris Tefsen
- Department of Biological Sciences, Xi'an Jiaotong-Liverpool University, Suzhou, Jiangsu 215123, China; Ronin Institute, Montclair, NJ 07043, United States.
| | - Mona Wells
- Environmental Sciences, Hawkes Bay Regional Council, Napier 4110, New Zealand.
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29
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Export of dissolved iron from river catchments in northeast Japan. LANDSCAPE AND ECOLOGICAL ENGINEERING 2021. [DOI: 10.1007/s11355-020-00435-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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30
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Hanikenne M, Esteves SM, Fanara S, Rouached H. Coordinated homeostasis of essential mineral nutrients: a focus on iron. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:2136-2153. [PMID: 33175167 DOI: 10.1093/jxb/eraa483] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 10/13/2020] [Indexed: 05/22/2023]
Abstract
In plants, iron (Fe) transport and homeostasis are highly regulated processes. Fe deficiency or excess dramatically limits plant and algal productivity. Interestingly, complex and unexpected interconnections between Fe and various macro- and micronutrient homeostatic networks, supposedly maintaining general ionic equilibrium and balanced nutrition, are currently being uncovered. Although these interactions have profound consequences for our understanding of Fe homeostasis and its regulation, their molecular bases and biological significance remain poorly understood. Here, we review recent knowledge gained on how Fe interacts with micronutrient (e.g. zinc, manganese) and macronutrient (e.g. sulfur, phosphate) homeostasis, and on how these interactions affect Fe uptake and trafficking. Finally, we highlight the importance of developing an improved model of how Fe signaling pathways are integrated into functional networks to control plant growth and development in response to fluctuating environments.
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Affiliation(s)
- Marc Hanikenne
- InBioS - PhytoSystems, Functional Genomics and Plant Molecular Imaging, University of Liège, 4000 Liège, Belgium
| | - Sara M Esteves
- InBioS - PhytoSystems, Functional Genomics and Plant Molecular Imaging, University of Liège, 4000 Liège, Belgium
| | - Steven Fanara
- InBioS - PhytoSystems, Functional Genomics and Plant Molecular Imaging, University of Liège, 4000 Liège, Belgium
| | - Hatem Rouached
- BPMP, Univ. Montpellier, CNRS, INRA, Montpellier SupAgro, Montpellier, France
- Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI, USA
- Plant Resilience Institute, Michigan State University, East Lansing, MI, USA
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31
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Qiu GW, Lis H, Qiu BS, Keren N. Long-term iron deprivation and subsequent recovery uncover heterogeneity in the response of cyanobacterial populations. Environ Microbiol 2021; 23:1793-1804. [PMID: 33615658 DOI: 10.1111/1462-2920.15443] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2020] [Revised: 02/15/2021] [Accepted: 02/20/2021] [Indexed: 11/29/2022]
Abstract
Cyanobacteria are globally important primary producers and nitrogen fixers. They are frequently limited by iron bioavailability in natural environments that often fluctuate due to rapid consumption and irregular influx of external Fe. Here we identify a succession of physiological changes in Synechocystis sp. PCC 6803 occurring over 14-16 days of iron deprivation and subsequent recovery. We observe several adaptive strategies that allow cells to push their metabolic limits under the restriction of declining intracellular Fe quotas. Interestingly, cyanobacterial populations exposed to prolonged iron deprivation showed discernible heterogeneity in cellular auto-fluorescence during the recovery process. Using FACS and microscopy techniques we revealed that only cells with high auto-fluorescence were able to grow and reconstitute thylakoid membranes. We propose that ROS-mediated damage is likely to be associated with the emergence of the two subpopulations, and, indeed, a rapid increase in intracellular ROS content was observed during the first hours following iron addition to Fe-starved cultures. These results suggest that an increasing iron supply is a double-edged sword - posing both an opportunity and a risk. Therefore, phenotypic heterogeneity within populations is crucial for the survival and proliferation of organisms facing iron fluctuations within natural environments.
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Affiliation(s)
- Guo-Wei Qiu
- Department of Plant and Environmental Sciences, Edmond J. Safra Campus, The Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, Givat Ram, Jerusalem, 9190402, Israel.,School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China
| | - Hagar Lis
- Department of Plant and Environmental Sciences, Edmond J. Safra Campus, The Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, Givat Ram, Jerusalem, 9190402, Israel
| | - Bao-Sheng Qiu
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, Hubei, 430079, China
| | - Nir Keren
- Department of Plant and Environmental Sciences, Edmond J. Safra Campus, The Alexander Silberman Institute of Life Sciences, Hebrew University of Jerusalem, Givat Ram, Jerusalem, 9190402, Israel
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Kotabova E, Malych R, Pierella Karlusich JJ, Kazamia E, Eichner M, Mach J, Lesuisse E, Bowler C, Prášil O, Sutak R. Complex Response of the Chlorarachniophyte Bigelowiella natans to Iron Availability. mSystems 2021; 6:e00738-20. [PMID: 33563784 PMCID: PMC7883536 DOI: 10.1128/msystems.00738-20] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Accepted: 01/10/2021] [Indexed: 11/20/2022] Open
Abstract
The productivity of the ocean is largely dependent on iron availability, and marine phytoplankton have evolved sophisticated mechanisms to cope with chronically low iron levels in vast regions of the open ocean. By analyzing the metabarcoding data generated from the Tara Oceans expedition, we determined how the global distribution of the model marine chlorarachniophyte Bigelowiella natans varies across regions with different iron concentrations. We performed a comprehensive proteomics analysis of the molecular mechanisms underpinning the adaptation of B. natans to iron scarcity and report on the temporal response of cells to iron enrichment. Our results highlight the role of phytotransferrin in iron homeostasis and indicate the involvement of CREG1 protein in the response to iron availability. Analysis of the Tara Oceans metagenomes and metatranscriptomes also points to a similar role for CREG1, which is found to be widely distributed among marine plankton but to show a strong bias in gene and transcript abundance toward iron-deficient regions. Our analyses allowed us to define a new subfamily of the CobW domain-containing COG0523 putative metal chaperones which are involved in iron metabolism and are restricted to only a few phytoplankton lineages in addition to B. natans At the physiological level, we elucidated the mechanisms allowing a fast recovery of PSII photochemistry after resupply of iron. Collectively, our study demonstrates that B. natans is well adapted to dynamically respond to a changing iron environment and suggests that CREG1 and COG0523 are important components of iron homeostasis in B. natans and other phytoplankton.IMPORTANCE Despite low iron availability in the ocean, marine phytoplankton require considerable amounts of iron for their growth and proliferation. While there is a constantly growing knowledge of iron uptake and its role in the cellular processes of the most abundant marine photosynthetic groups, there are still largely overlooked branches of the eukaryotic tree of life, such as the chlorarachniophytes. In the present work, we focused on the model chlorarachniophyte Bigelowiella natans, integrating physiological and proteomic analyses in culture conditions with the mining of omics data generated by the Tara Oceans expedition. We provide unique insight into the complex responses of B. natans to iron availability, including novel links to iron metabolism conserved in other phytoplankton lineages.
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Affiliation(s)
- Eva Kotabova
- Institute of Microbiology, Academy of Sciences, Centrum Algatech, Trebon, Czech Republic
| | - Ronald Malych
- Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
| | - Juan José Pierella Karlusich
- Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
- CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France
| | - Elena Kazamia
- Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
| | - Meri Eichner
- Institute of Microbiology, Academy of Sciences, Centrum Algatech, Trebon, Czech Republic
| | - Jan Mach
- Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
| | - Emmanuel Lesuisse
- Jacques Monod Institute, UMR7592 CNRS, Paris Diderot University, Paris, France
| | - Chris Bowler
- Institut de Biologie de l'ENS, Département de Biologie, École Normale Supérieure, CNRS, INSERM, Université PSL, Paris, France
- CNRS Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, Paris, France
| | - Ondřej Prášil
- Institute of Microbiology, Academy of Sciences, Centrum Algatech, Trebon, Czech Republic
| | - Robert Sutak
- Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Vestec, Czech Republic
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Qiu GW, Jiang HB, Lis H, Li ZK, Deng B, Shang JL, Sun CY, Keren N, Qiu BS. A unique porin meditates iron-selective transport through cyanobacterial outer membranes. Environ Microbiol 2020; 23:376-390. [PMID: 33196124 DOI: 10.1111/1462-2920.15324] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2020] [Revised: 11/02/2020] [Accepted: 11/12/2020] [Indexed: 10/23/2022]
Abstract
Cyanobacteria are globally important primary producers and nitrogen fixers with high iron demands. Low ambient dissolved iron concentrations in many aquatic environments mean that these organisms must maintain sufficient and selective transport of iron into the cell. However, the nature of iron transport pathways through the cyanobacterial outer membrane remains obscure. Here we present multiple lines of experimental evidence that collectively support the existence of a novel class of substrate-selective iron porin, Slr1908, in the outer membrane of the cyanobacterium Synechocystis sp. PCC 6803. Elemental composition analysis and short-term iron uptake assays with mutants in Slr1908 reveal that this protein is primarily involved in inorganic iron uptake and contributes less to the accumulation of other metals. Homologues of Slr1908 are widely distributed in both freshwater and marine cyanobacteria, most notably in unicellular marine diazotrophs. Complementary experiments with a homologue of Slr1908 in Synechococcus sp. PCC 7002 restored the phenotype of Synechocystis knockdown mutants, showing that this siderophore producing species also possesses a porin with a similar function in Fe transport. The involvement of a substrate-selective porins in iron uptake may allow cyanobacteria to tightly control iron flux into the cell, particularly in environments where iron concentrations fluctuate.
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Affiliation(s)
- Guo-Wei Qiu
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
| | - Hai-Bo Jiang
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
| | - Hagar Lis
- Department of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem, Israel
| | - Zheng-Ke Li
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
| | - Bin Deng
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
| | - Jin-Long Shang
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
| | - Chuan-Yu Sun
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
| | - Nir Keren
- Department of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem, Israel
| | - Bao-Sheng Qiu
- School of Life Sciences, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Central China Normal University, Wuhan, China
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Abou El-Reash YG, Tantawy HA, Abdel-Latif E, Mortada WI. Micelle-mediated extraction for speciation and spectrophotometric determination of iron using a newly synthesized salicylic acid derivative. Microchem J 2020. [DOI: 10.1016/j.microc.2020.105280] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Giannopoulos G, Hartop KR, Brown BL, Song B, Elsgaard L, Franklin RB. Trace Metal Availability Affects Greenhouse Gas Emissions and Microbial Functional Group Abundance in Freshwater Wetland Sediments. Front Microbiol 2020; 11:560861. [PMID: 33117308 PMCID: PMC7561414 DOI: 10.3389/fmicb.2020.560861] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2020] [Accepted: 08/24/2020] [Indexed: 12/14/2022] Open
Abstract
We investigated the effects of trace metal additions on microbial nitrogen (N) and carbon (C) cycling using freshwater wetland sediment microcosms amended with micromolar concentrations of copper (Cu), molybdenum (Mo), iron (Fe), and all combinations thereof. In addition to monitoring inorganic N transformations (NO3 -, NO2 -, N2O, NH4 +) and carbon mineralization (CO2, CH4), we tracked changes in functional gene abundance associated with denitrification (nirS, nirK, nosZ), dissimilatory nitrate reduction to ammonium (DNRA; nrfA), and methanogenesis (mcrA). With regards to N cycling, greater availability of Cu led to more complete denitrification (i.e., less N2O accumulation) and a higher abundance of the nirK and nosZ genes, which encode for Cu-dependent reductases. In contrast, we found sparse biochemical evidence of DNRA activity and no consistent effect of the trace metal additions on nrfA gene abundance. With regards to C mineralization, CO2 production was unaffected, but the amendments stimulated net CH4 production and Mo additions led to increased mcrA gene abundance. These findings demonstrate that trace metal effects on sediment microbial physiology can impact community-level function. We observed direct and indirect effects on both N and C biogeochemistry that resulted in increased production of greenhouse gasses, which may have been mediated through the documented changes in microbial community composition and shifts in functional group abundance. Overall, this work supports a more nuanced consideration of metal effects on environmental microbial communities that recognizes the key role that metal limitation plays in microbial physiology.
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Affiliation(s)
- Georgios Giannopoulos
- Department of Biology, Virginia Commonwealth University, Richmond, VA, United States
| | - Katherine R Hartop
- Department of Biology, Virginia Commonwealth University, Richmond, VA, United States
| | - Bonnie L Brown
- Department of Biological Sciences, University of New Hampshire, Durham, NH, United States
| | - Bongkeun Song
- Department of Biological Sciences, Virginia Institute of Marine Science, College of William & Mary, Gloucester Point, VA, United States
| | - Lars Elsgaard
- Department of Agroecology, Aarhus University, Tjele, Denmark
| | - Rima B Franklin
- Department of Biology, Virginia Commonwealth University, Richmond, VA, United States
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Li Y, Nwankwegu AS, Huang Y, Norgbey E, Paerl HW, Acharya K. Evaluating the phytoplankton, nitrate, and ammonium interactions during summer bloom in tributary of a subtropical reservoir. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2020; 271:110971. [PMID: 32579524 DOI: 10.1016/j.jenvman.2020.110971] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 05/21/2020] [Accepted: 06/14/2020] [Indexed: 06/11/2023]
Abstract
The rational eutrophication management largely depends on the knowledge of the dynamics in the dissolved inorganic nutrients especially nitrogen forms which trigger exponential primary productivity in eutrophic systems. The present study investigated the phytoplankton interactions with the dissolved N forms, nitrate (NO3) and ammonium (NH4) in a sub-tropical Yangtze River tributary, China vulnerable to multiple anthropogenic stressors following the impoundment of the largest hydraulic structure, the Three Gorges Dam. Results indicated strong NO3 inhibition by the low NH4 pool exerting toxic effects on the major phytoplankton groups, particularly the Bacilliariophyta (relative abundance < 1%) while significant Cyanophyta proliferation prevailed (relative abundance ≥ 90%). Strong N limitation exacerbated by NH4 deficit and P replete condition characterizes the summer bloom in the tributary. The biomass attenuation kinetics revealed significantly fast NH4 metabolism, half-life (t1/2= 1.4 d, K = 0.00750 ± 0.004 d-1) as the first-order rate adequately fitted into the experimental data although, the second-order rate also demonstrated considerable goodness of fit. The growth responses induced by the Si enrichment potentially suggested possible secondary limitation by Si with the likelihood of intensification should the ecosystem phytoplankton community dominance shifts from Cyanophyta to the Bacilliariophyta. The response of P enrichment on growth was attributed to luxury consumption rather than limitation as responses only became significant towards the end of the study. The study, therefore, presents the first report of biomass ageing rate worthy of incorporation into the recent bloom management protocol for the development of predictive ecosystem dynamics.
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Affiliation(s)
- Yiping Li
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China.
| | - Amechi S Nwankwegu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China.
| | - Yanan Huang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Eyram Norgbey
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Hans W Paerl
- Institute of Marine Sciences, The University of North Carolina at Chapel Hill, Morehead City, NC, USA
| | - Kumud Acharya
- Division of Hydrologic Sciences, Desert Research Institute, Las Vegas, NV, USA
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Nwankwegu AS, Li Y, Huang Y, Wei J, Norgbey E, Ji D, Pu Y, Nuamah LA, Yang Z, Jiang Y, Paerl HW. Nitrate repletion during spring bloom intensifies phytoplankton iron demand in Yangtze River tributary, China. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 264:114626. [PMID: 32387673 DOI: 10.1016/j.envpol.2020.114626] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Revised: 04/11/2020] [Accepted: 04/15/2020] [Indexed: 06/11/2023]
Abstract
Most aquatic systems show characteristic seasonal fluctuations in the total nutrient pool supporting primary productivity. The nutrient dynamics essentially exacerbate critical demand for the counterpart micronutrients towards achieving ecosystem equilibrium. Herein, the phytoplankton demand for iron (Fe) uptake under high concentration of nitrate-nitrogen during spring in Xiangxi Bay, China, was studied. Our result confirmed that significant Fe concentrations (P = 0.01) in both autumn (0.62 ± 0.02 mgL-1) and winter (0.06 ± 0.03 mgL-1) relative to spring (0.004 ± 0.01 mgL-1) are linked to the low NO3-N paradigms during autumn and winter. As NO3-N showed a sharp increase in spring, a dramatic reduction in the Fe pool was observed in the entire tributary, driving the system to a critical Fe limited condition. Bioassay study involving Fe additions both alone and in combinations led to maximum growth stimulation with biomass as chla (16.44 ± 0.82 μgL-1) and phytoplankton cell density (6.75 × 106 cellsL-1) which differed significantly (P = 0.03) with the control. Further, the study demonstrated that Fe additions triggered biomass productions which increased linearly with cell densities. The P alone addition caused biomass production (15.26 ± 2.51 μgL-1) greater than both NO3-N (9.15 ± 0.66 μgL-1) and NH4+N (13.65 ± 1.68 μgL-1) separate additions but reported a low aggregate cell density (3.18 × 106 cellsL-1). This indicates that nutrient and taxonomic characteristics e.g., high cell pigment contents rather than just the cell bio-volume also determine biomass. The Bacilliarophyta, Chlorophyta, and Cryptophyta with the total extinction of Cyanophyta characterized the bloom in spring. The anthropogenic NO3-N input into XXB would have driven to higher NO3-N than NH4+N situation, and incapacitated the Cyanophyta that preferentially utilize NH4+N. Our study provides a useful report for incorporation into the monitoring programs for prudent management of phytoplankton bloom and pollution across the eutrophic systems.
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Affiliation(s)
- Amechi S Nwankwegu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Yiping Li
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China.
| | - Yanan Huang
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Jin Wei
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Eyram Norgbey
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Daobin Ji
- College of Hydraulic and Environmental Engineering, Three Gorges University, Yichang, 443002, Hubei, China
| | - Yashuai Pu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Linda A Nuamah
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, No.1 Xikang Road, Gulou District, Nanjing, 210098, China
| | - Zhengjian Yang
- College of Hydraulic and Environmental Engineering, Three Gorges University, Yichang, 443002, Hubei, China
| | - Yufeng Jiang
- Nanjing Hohai Technology Co., Ltd, Nanjing, 210016, China
| | - Hans W Paerl
- Institute of Marine Sciences, The University of North Carolina at Chapel Hill, Morehead City, NC, USA
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Rizkallah MR, Frickenhaus S, Trimborn S, Harms L, Moustafa A, Benes V, Gäbler-Schwarz S, Beszteri S. Deciphering Patterns of Adaptation and Acclimation in the Transcriptome of Phaeocystis antarctica to Changing Iron Conditions 1. JOURNAL OF PHYCOLOGY 2020; 56:747-760. [PMID: 32068264 DOI: 10.1111/jpy.12979] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Accepted: 01/21/2020] [Indexed: 06/10/2023]
Abstract
The haptophyte Phaeocystis antarctica is endemic to the Southern Ocean, where iron supply is sporadic and its availability limits primary production. In iron fertilization experiments, P. antarctica showed a prompt and steady increase in cell abundance compared to heavily silicified diatoms along with enhanced colony formation. Here we utilized a transcriptomic approach to investigate molecular responses to alleviation of iron limitation in P. antarctica. We analyzed the transcriptomic response before and after (14 h, 24 h and 72 h) iron addition to a low-iron acclimated culture. After iron addition, we observed indicators of a quick reorganization of cellular energetics, from carbohydrate catabolism and mitochondrial energy production to anabolism. In addition to typical substitution responses from an iron-economic toward an iron-sufficient state for flavodoxin (ferredoxin) and plastocyanin (cytochrome c6 ), we found other genes utilizing the same strategy involved in nitrogen assimilation and fatty acid desaturation. Our results shed light on a number of adaptive mechanisms that P. antarctica uses under low iron, including the utilization of a Cu-dependent ferric reductase system and indication of mixotrophic growth. The gene expression patterns underpin P. antarctica as a quick responder to iron addition.
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Affiliation(s)
| | - Stephan Frickenhaus
- Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
- Centre for Industrial Mathematics, University of Bremen, Bibliothekstrasse 1, 28359 Postfach 330440, 28334, Bremen, Germany
| | - Scarlett Trimborn
- Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
- Department of Marine Botany, University of Bremen, Bibliothekstrasse 1, 28359 Postfach 330440, 28334, Bremen, Germany
| | - Lars Harms
- Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
- Helmholtz Institute for Functional Marine Biodiversity at the University of Oldenburg (HIFMB), Ammerländer Herrstrasse 231, 26129, Oldenburg, Germany
| | - Ahmed Moustafa
- Department of Biology, American University in Cairo, P.O. Box 74, 11835, Cairo, Egypt
| | - Vladimir Benes
- European Molecular Biology Laboratory, Meyerhofstraße 1, 69117, Heidelberg, Germany
| | - Steffi Gäbler-Schwarz
- Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
| | - Sara Beszteri
- Alfred Wegener Institute for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
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Harmful algal blooms under changing climate and constantly increasing anthropogenic actions: the review of management implications. 3 Biotech 2019; 9:449. [PMID: 31832296 DOI: 10.1007/s13205-019-1976-1] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Accepted: 10/29/2019] [Indexed: 12/11/2022] Open
Abstract
The present review reports all management approaches (physical, chemical, and biological) traditionally adopted in mitigating the global impact of harmful cyanobacterial blooms (cyanoHABs). It recognizes that each mitigation strategy shows characteristic associated limitations and notes that no remedial step has provided a sustainable solution to HABs on a global scale. It emphasizes that the putative anthropogenic N&P inputs reduction through improved wastewater treatment and regulation of point and non-point sources-agricultural fertilizers only offer a short term solution. These approaches are rather preventive than curative hence, do not address concerns relating to the recovery of already-eutrophic and hypereutrophic systems. It raises new concerns on the implications of non-agricultural pollutants such as hydrocarbon fractions in bloom accretions often neglected while addressing HAB triggers. It also accesses the global impacts of HABs as it pertains to socio-economic implications in the geographically diverse world. It, therefore, proposes that Integrated Management Intervention involving the merging of two or more mitigation steps be administered across the aquatic continua as a prudent management solution to complement the current N&P dual management paradigm. It stresses that the contemporaneous adoption of management options with both preventive and curative measures is a key to sustainable HAB management. This review provides sufficient advances and current scenarios for approaching cyanoHABs. Further, it advocates that future research perspectives tackle the mitigation design beyond the short-term nutrient regulations and the parochial attention to the point and non-point N&P input sources.
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Schoffman H, Keren N. Function of the IsiA pigment-protein complex in vivo. PHOTOSYNTHESIS RESEARCH 2019; 141:343-353. [PMID: 30929163 DOI: 10.1007/s11120-019-00638-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Accepted: 03/18/2019] [Indexed: 06/09/2023]
Abstract
The acclimation of cyanobacterial photosynthetic apparatus to iron deficiency is crucial for their performance under limiting conditions. In many cyanobacterial species, one of the major responses to iron deficiency is the induction of isiA. The function of the IsiA pigment-protein complex has been the subject of intensive research. In this study of the model Synechocystis sp. PCC 6803 strain, we probe the accumulation of the pigment-protein complex and its effects on in vivo photosynthetic performance. We provide evidence that in this organism the dominant factor controlling IsiA accumulation is the intracellular iron concentration and not photo-oxidative stress or redox poise. These findings support the use of IsiA as a tool for assessing iron bioavailability in environmental studies. We also present evidence demonstrating that the IsiA pigment-protein complex exerts only small effects on the performance of the reaction centers. We propose that its major function is as a storage depot able to hold up to 50% of the cellular chlorophyll content during transition into iron limitation. During recovery from iron limitation, chlorophyll is released from the complex and used for the reconstruction of photosystems. Therefore, the IsiA pigment-protein complex can play a critical role not only when cells transition into iron limitation, but also in supporting efficient recovery of the photosynthetic apparatus in the transition back out of the iron-limited state.
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Affiliation(s)
- Hanan Schoffman
- Department of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem, Israel
| | - Nir Keren
- Department of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Givat Ram, Jerusalem, Israel.
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Wu M, McCain JSP, Rowland E, Middag R, Sandgren M, Allen AE, Bertrand EM. Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators. Nat Commun 2019; 10:3582. [PMID: 31395884 PMCID: PMC6687791 DOI: 10.1038/s41467-019-11426-z] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2018] [Accepted: 07/15/2019] [Indexed: 11/10/2022] Open
Abstract
Iron and light are recognized as limiting factors controlling Southern Ocean phytoplankton growth. Recent field-based evidence suggests, however, that manganese availability may also play a role. Here we examine the influence of iron and manganese on protein expression and physiology in Phaeocystis antarctica, a key Antarctic primary producer. We provide taxon-specific proteomic evidence to show that in-situ Southern Ocean Phaeocystis populations regularly experience stress due to combined low manganese and iron availability. In culture, combined low iron and manganese induce large-scale changes in the Phaeocystis proteome and result in reorganization of the photosynthetic apparatus. Natural Phaeocystis populations produce protein signatures indicating late-season manganese and iron stress, consistent with concurrently observed stimulation of chlorophyll production upon additions of manganese or iron. These results implicate manganese as an important driver of Southern Ocean productivity and demonstrate the utility of peptide mass spectrometry for identifying drivers of incomplete macronutrient consumption.
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Affiliation(s)
- Miao Wu
- Department of Biology, Dalhousie University, 1355 Oxford Street PO Box 15000, Halifax, B3H 4R2, NS, Canada
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, Box 7015, 750 07, Uppsala, Sweden
| | - J Scott P McCain
- Department of Biology, Dalhousie University, 1355 Oxford Street PO Box 15000, Halifax, B3H 4R2, NS, Canada
| | - Elden Rowland
- Department of Biology, Dalhousie University, 1355 Oxford Street PO Box 15000, Halifax, B3H 4R2, NS, Canada
| | - Rob Middag
- Department of Ocean Systems, NIOZ Royal Netherlands Institute for Sea Research, and Utrecht University, P.O. Box 59, Den Burg, Texel, 1790 AB, Netherlands
| | - Mats Sandgren
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, Box 7015, 750 07, Uppsala, Sweden
| | - Andrew E Allen
- Microbial and Environmental Genomics, J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA, 92037, USA
- Integrative Oceanography Division, Scripps Institution of Oceanography, University of California, 9500 Gilman Drive, La Jolla, CA, 92093, USA
| | - Erin M Bertrand
- Department of Biology, Dalhousie University, 1355 Oxford Street PO Box 15000, Halifax, B3H 4R2, NS, Canada.
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Kochoni E, Fortin C. Iron Modulation of Copper Uptake and Toxicity in a Green Alga ( Chlamydomonas reinhardtii). ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:6539-6545. [PMID: 31082264 DOI: 10.1021/acs.est.9b01369] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Little attention has been paid to the role of essential trace elements on the toxicity of another element. In this work, we examined if low concentrations of essential elements (Co, Mn, Zn, and Fe) modified the response of a freshwater green alga ( Chlamydomonas reinhardtii) to copper. To do so, we followed cell growth over 72 h in exposure media where the essential element concentrations were manipulated. Among these elements, iron proved to have a strong impact on the cells' response to copper. The free Cu2+ concentrations required to inhibit cellular growth by 50% (EC50) over 72 h decreased from 2 nM in regular Fe medium (10-17.6 M Fe3+) to 4 pM in low iron medium (10-19.0 M Fe3+); a 500-fold increase in toxicity. Moreover, at low Cu2+ concentrations (10-13.0 to 10-10.5 M), Cu uptake increased under low iron conditions but remain relatively stable under regular iron conditions. These results show clearly that iron plays a protective role against copper uptake and toxicity to C. reinhardtii. In freshwaters, iron is always abundant but the expected free iron concentrations in surface waters can vary between 10-14.0 to 10-20.0 M, depending on pH (e.g., when pH increases from 6 to 8). We conclude that copper toxicity in natural waters can be modulated by iron and that, in some conditions, the Biotic Ligand Model may need to be further developed to account for the influence of iron.
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Affiliation(s)
- Emeric Kochoni
- Institut national de la Recherche scientifique , Centre Eau Terre Environnement , 490 de la Couronne , Québec , QC G1K 9A9 , Canada
| | - Claude Fortin
- Institut national de la Recherche scientifique , Centre Eau Terre Environnement , 490 de la Couronne , Québec , QC G1K 9A9 , Canada
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Fu Q, Yeung ACY, Fujii M, Neilan BA, Waite TD. Physiological responses of the freshwater N
2
‐fixing cyanobacterium
Raphidiopsis raciborskii
to Fe and N availabilities. Environ Microbiol 2019; 21:1211-1223. [DOI: 10.1111/1462-2920.14545] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Revised: 01/23/2019] [Accepted: 01/24/2019] [Indexed: 12/12/2022]
Affiliation(s)
- Qing‐Long Fu
- Department of Civil and Environmental Engineering Tokyo Institute of Technology Ookayama, Tokyo Japan
| | - Anna C. Y. Yeung
- School of Civil and Environmental Engineering The University of New South Wales Sydney Australia
| | - Manabu Fujii
- Department of Civil and Environmental Engineering Tokyo Institute of Technology Ookayama, Tokyo Japan
| | - Brett A. Neilan
- School of Environmental and Life Sciences The University of Newcastle Newcastle Australia
| | - T. David Waite
- School of Civil and Environmental Engineering The University of New South Wales Sydney Australia
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Abstract
SIGNIFICANCE Iron is required for growth and is often redox active under cytosolic conditions. As a result of its facile redox chemistry, iron homeostasis is intricately involved with oxidative stress. Bacterial adaptation to iron limitation and oxidative stress often involves ferric uptake regulator (Fur) proteins: a diverse set of divalent cation-dependent, DNA-binding proteins that vary widely in both metal selectivity and sensitivity to metal-catalyzed oxidation. Recent Advances: Bacteria contain two Fur family metalloregulators that use ferrous iron (Fe2+) as their cofactor, Fur and PerR. Fur functions to regulate iron homeostasis in response to changes in intracellular levels of Fe2+. PerR also binds Fe2+, which enables metal-catalyzed protein oxidation as a mechanism for sensing hydrogen peroxide (H2O2). CRITICAL ISSUES To effectively regulate iron homeostasis, Fur has an Fe2+ affinity tuned to monitor the labile iron pool of the cell and may be under selective pressure to minimize iron oxidation, which would otherwise lead to an inappropriate increase in iron uptake under oxidative stress conditions. Conversely, Fe2+ is bound more tightly to PerR but exhibits high H2O2 reactivity, which enables a rapid induction of peroxide stress genes. FUTURE DIRECTIONS The features that determine the disparate reactivity of these proteins with oxidants are still poorly understood. A controlled, comparative analysis of the affinities of Fur/PerR proteins for their metal cofactors and their rate of reactivity with H2O2, combined with structure/function analyses, will be needed to define the molecular mechanisms that have facilitated this divergence of function between these two paralogous regulators.
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Affiliation(s)
| | - John D Helmann
- Department of Microbiology, Cornell University , Ithaca, New York
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Lebret K, Östman Ö, Langenheder S, Drakare S, Guillemette F, Lindström ES. High abundances of the nuisance raphidophyte Gonyostomum semen in brown water lakes are associated with high concentrations of iron. Sci Rep 2018; 8:13463. [PMID: 30194445 PMCID: PMC6128840 DOI: 10.1038/s41598-018-31892-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2018] [Accepted: 08/28/2018] [Indexed: 11/09/2022] Open
Abstract
Algal blooms occur frequently in lakes and oceans and the causes and consequences of those are often studied. In this study, we focus on a less well known type of algal bloom by the freshwater raphidophyte Gonyostomum semen. This species’ abundance and occurrence is increasing, especially in brown water lakes, the most abundant lake type in the boreal zone. The aim of the study was to investigate which environmental factors are associated with G. semen by statistical evaluation of field data of 95 Swedish lakes over five years. Although we found G. semen to be associated with dark waters it was, contrary to our expectations, mainly high concentrations of iron, and only to a lesser extent high TOC (total organic carbon) concentrations, that were associated with blooms of G. semen. In addition, high phosphorus concentrations and low pH also appear to facilitate G. semen blooms. We suggest that browning of lakes caused by increased iron concentrations may decrease net heterotrophy by fostering heavy algal blooms, i.e. the opposite to commonly assumed effects of increased DOM (dissolved organic matter).
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Affiliation(s)
- Karen Lebret
- Department of Ecology and Genetics/Limnology, Uppsala University, Norbyvägen 18D, SE-752 36, Uppsala, Sweden. .,Centre for Ecology and Evolution in Microbial model Systems - EEMiS, Department of Biology and Environmental Science, Linnæus University, SE-391 82, Kalmar, Sweden.
| | - Örjan Östman
- Department of Aquatic Resources, Swedish University of Agricultural Sciences, Skolgatan 6, SE-742 42, Öregrund, Sweden
| | - Silke Langenheder
- Department of Ecology and Genetics/Limnology, Uppsala University, Norbyvägen 18D, SE-752 36, Uppsala, Sweden
| | - Stina Drakare
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences - SLU, PO Box 7050, SE-750 07, Uppsala, Sweden
| | - François Guillemette
- Research Center on Watershed - Aquatic Ecosystem Interactions (RIVE), Department of Environmental Sciences, Université du Québec à Trois-Rivières, Québec, Canada
| | - Eva S Lindström
- Department of Ecology and Genetics/Limnology, Uppsala University, Norbyvägen 18D, SE-752 36, Uppsala, Sweden
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Bioavailability of Mineral-Bound Iron to a Snow Algal-Bacterial Coculture and Implications for Albedo-Altering Snow Algal Blooms. Appl Environ Microbiol 2018; 84:AEM.02322-17. [PMID: 29374032 DOI: 10.1128/aem.02322-17] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Accepted: 01/15/2018] [Indexed: 11/20/2022] Open
Abstract
Snow algae can form large-scale blooms across the snowpack surface and near-surface environments. These pigmented blooms can decrease snow albedo and increase local melt rates, and they may impact the global heat budget and water cycle. Yet, the underlying causes for the geospatial occurrence of these blooms remain unconstrained. One possible factor contributing to snow algal blooms is the presence of mineral dust as a micronutrient source. We investigated the bioavailability of iron (Fe)-bearing minerals, including forsterite (Fo90, Mg1.8Fe0.2SiO4), goethite, smectite, and pyrite as Fe sources for a Chloromonas brevispina-bacterial coculture through laboratory-based experimentation. Fo90 was capable of stimulating snow algal growth and increased the algal growth rate in otherwise Fe-depleted cocultures. Fo90-bearing systems also exhibited a decrease in the ratio of bacteria to algae compared to those of Fe-depleted conditions, suggesting a shift in microbial community structure. The C. brevispina coculture also increased the rate of Fo90 dissolution relative to that of an abiotic control. Analysis of 16S rRNA genes in the coculture identified Gammaproteobacteria, Betaproteobacteria, and Sphingobacteria, all of which are commonly found in snow and ice environments. Archaea were not detected. Collimonas and Pseudomonas, which are known to enhance mineral weathering rates, comprised two of the top eight (>1%) operational taxonomic units (OTUs). These data provide unequivocal evidence that mineral dust can support elevated snow algal growth under otherwise Fe-depleted growth conditions and that snow algal microbial communities can enhance mineral dissolution under these conditions.IMPORTANCE Fe, a key micronutrient for photosynthetic growth, is necessary to support the formation of high-density snow algal blooms. The laboratory experiments described herein allow for a systematic investigation of the interactions of snow algae, bacteria, and minerals and their ability to mobilize and uptake mineral-bound Fe. Results provide unequivocal and comprehensive evidence that mineral-bound Fe in Fe-bearing Fo90 was bioavailable to Chloromonas brevispina snow algae within an algal-bacterial coculture. This evidence includes (i) an observed increase in snow algal density and growth rate, (ii) decreased ratios of bacteria to algae in Fo90-containing cultures relative to those of cultures grown under similarly Fe-depleted conditions with no mineral-bound Fe present, and (iii) increased Fo90 dissolution rates in the presence of algal-bacterial cocultures relative to those of abiotic mineral controls. These results have important implications for the role of mineral dust in supplying micronutrients to the snow microbiome, which may help support dense snow algal blooms capable of lowering snow albedo and increasing snow melt rates on regional, and possibly global, scales.
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Iron and phosphorus deprivation induce sociality in the marine bloom-forming cyanobacterium Trichodesmium. ISME JOURNAL 2018; 12:1682-1693. [PMID: 29463890 DOI: 10.1038/s41396-018-0073-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Revised: 01/23/2018] [Accepted: 01/25/2018] [Indexed: 11/09/2022]
Abstract
Trichodesmium spp. are diazotrophic cyanobacteria that exist as single filaments (trichomes) and as macroscopic colonies of varying shapes formed by aggregating trichomes. The causes and dynamics of colony formation and disassociation are not yet elucidated. we demonstrate that limited availability of dissolved phosphorus (P) or iron (Fe) stimulated trichome mobility and induced colony formation in Trichodesmium erythraeum IMS101 cultures. The specific nutrient limitation differentially affected the rate of colony formation and morphology of the colonies. Fe starvation promoted rapid colony formation (10-48 h from depletion) while 5-7 days were required for colonies to form in P-depleted cultures. Video analyses confirmed that the probability of trichomes to cluster increased from 12 to 35% when transferred from nutrient replete to Fe-depleted conditions. Moreover, the probability for Fe-depleted aggregates to remain colonial increased to 50% from only 10% in nutrient replete cultures. These colonies were also characterized by stronger attachment forces between the trichomes. Enrichment of nutrient-depleted cultures with the limited nutrient-stimulated colony dissociation into single trichomes. We postulate that limited P and Fe availability enhance colony formation of Trichodesmium and primarily control the abundance and distribution of its different morphologies in the nutrient-limited surface ocean.
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