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Rigby M, Grillo FW, Compans B, Neves G, Gallinaro J, Nashashibi S, Horton S, Pereira Machado PM, Carbajal MA, Vizcay-Barrena G, Levet F, Sibarita JB, Kirkland A, Fleck RA, Clopath C, Burrone J. Multi-synaptic boutons are a feature of CA1 hippocampal connections in the stratum oriens. Cell Rep 2023; 42:112397. [PMID: 37074915 PMCID: PMC10695768 DOI: 10.1016/j.celrep.2023.112397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 01/21/2023] [Accepted: 03/30/2023] [Indexed: 04/20/2023] Open
Abstract
Excitatory synapses are typically described as single synaptic boutons (SSBs), where one presynaptic bouton contacts a single postsynaptic spine. Using serial section block-face scanning electron microscopy, we found that this textbook definition of the synapse does not fully apply to the CA1 region of the hippocampus. Roughly half of all excitatory synapses in the stratum oriens involved multi-synaptic boutons (MSBs), where a single presynaptic bouton containing multiple active zones contacted many postsynaptic spines (from 2 to 7) on the basal dendrites of different cells. The fraction of MSBs increased during development (from postnatal day 22 [P22] to P100) and decreased with distance from the soma. Curiously, synaptic properties such as active zone (AZ) or postsynaptic density (PSD) size exhibited less within-MSB variation when compared with neighboring SSBs, features that were confirmed by super-resolution light microscopy. Computer simulations suggest that these properties favor synchronous activity in CA1 networks.
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Affiliation(s)
- Mark Rigby
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK
| | - Federico W Grillo
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK
| | - Benjamin Compans
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK
| | - Guilherme Neves
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; The Rosalind Franklin Institute, Harwell Campus, Didcot OX11 0FA, UK
| | - Julia Gallinaro
- Bioengineering Department, Imperial College London, London, UK
| | - Sophie Nashashibi
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK
| | - Sally Horton
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK
| | - Pedro M Pereira Machado
- Centre for Ultrastructural Imaging (CUI), Kings College London, New Hunts House, Guys Hospital Campus, London SE1 1UL, UK
| | - Maria Alejandra Carbajal
- Centre for Ultrastructural Imaging (CUI), Kings College London, New Hunts House, Guys Hospital Campus, London SE1 1UL, UK
| | - Gema Vizcay-Barrena
- Centre for Ultrastructural Imaging (CUI), Kings College London, New Hunts House, Guys Hospital Campus, London SE1 1UL, UK
| | - Florian Levet
- University Bordeaux, CNRS, Interdisciplinary Institute for Neuroscience, IINS, UMR 5297, 33000 Bordeaux, France; University Bordeaux, CNRS, INSERM, Bordeaux Imaging Center, BIC, UAR3420, US 4, 33000 Bordeaux, France
| | - Jean-Baptiste Sibarita
- University Bordeaux, CNRS, Interdisciplinary Institute for Neuroscience, IINS, UMR 5297, 33000 Bordeaux, France
| | - Angus Kirkland
- The Rosalind Franklin Institute, Harwell Campus, Didcot OX11 0FA, UK
| | - Roland A Fleck
- Centre for Ultrastructural Imaging (CUI), Kings College London, New Hunts House, Guys Hospital Campus, London SE1 1UL, UK
| | - Claudia Clopath
- Bioengineering Department, Imperial College London, London, UK
| | - Juan Burrone
- MRC Centre for Neurodevelopmental Disorders, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK; Centre for Developmental Neurobiology, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London SE1 1UL, UK.
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França TFA, Monserrat JM. Hippocampal place cells are topographically organized, but physical space has nothing to do with it. Brain Struct Funct 2019; 224:3019-3029. [DOI: 10.1007/s00429-019-01968-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2018] [Accepted: 10/11/2019] [Indexed: 12/18/2022]
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Nakazono T, Takahashi S, Sakurai Y. Enhanced Theta and High-Gamma Coupling during Late Stage of Rule Switching Task in Rat Hippocampus. Neuroscience 2019; 412:216-232. [DOI: 10.1016/j.neuroscience.2019.05.053] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Revised: 05/11/2019] [Accepted: 05/25/2019] [Indexed: 01/30/2023]
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Song K, Takahashi S, Sakurai Y. Reinforcement schedules differentially affect learning in neuronal operant conditioning in rats. Neurosci Res 2019; 153:62-67. [PMID: 31002837 DOI: 10.1016/j.neures.2019.04.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Revised: 04/01/2019] [Accepted: 04/12/2019] [Indexed: 10/27/2022]
Abstract
Operant conditioning of neuronal activity is a core process for better operation of brain-machine interfaces. However, few studies have investigated the role of reinforcement schedules in neuronal operant conditioning, although they are very effective in behavioral operant conditioning. To test the effect of different reinforcement schedules, the authors trained single-neuron activity in the motor cortex using fixed ratio (FR) and variable ratio (VR) schedules in rats. Neuronal firing rates were enhanced in the FR but not in the VR schedule during conditioning, suggesting that the principles of operant conditioning of neuronal activity are different from those of behavioral responses.
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Affiliation(s)
- Kichan Song
- Laboratory of Neural Information, Graduate School of Brain Science, Doshisha University, Kyotanabe, 610-0394, Kyoto, Japan
| | - Susumu Takahashi
- Laboratory of Cognitive and Behavioral Neuroscience, Graduate School of Brain Science, Doshisha University, Kyotanabe, 610-0394, Kyoto, Japan
| | - Yoshio Sakurai
- Laboratory of Neural Information, Graduate School of Brain Science, Doshisha University, Kyotanabe, 610-0394, Kyoto, Japan.
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Sakurai Y, Osako Y, Tanisumi Y, Ishihara E, Hirokawa J, Manabe H. Multiple Approaches to the Investigation of Cell Assembly in Memory Research-Present and Future. Front Syst Neurosci 2018; 12:21. [PMID: 29887797 PMCID: PMC5980992 DOI: 10.3389/fnsys.2018.00021] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Accepted: 05/02/2018] [Indexed: 11/13/2022] Open
Abstract
In this review article we focus on research methodologies for detecting the actual activity of cell assemblies, which are populations of functionally connected neurons that encode information in the brain. We introduce and discuss traditional and novel experimental methods and those currently in development and briefly discuss their advantages and disadvantages for the detection of cell-assembly activity. First, we introduce the electrophysiological method, i.e., multineuronal recording, and review former and recent examples of studies showing models of dynamic coding by cell assemblies in behaving rodents and monkeys. We also discuss how the firing correlation of two neurons reflects the firing synchrony among the numerous surrounding neurons that constitute cell assemblies. Second, we review the recent outstanding studies that used the novel method of optogenetics to show causal relationships between cell-assembly activity and behavioral change. Third, we review the most recently developed method of live-cell imaging, which facilitates the simultaneous observation of firings of a large number of neurons in behaving rodents. Currently, all these available methods have both advantages and disadvantages, and no single measurement method can directly and precisely detect the actual activity of cell assemblies. The best strategy is to combine the available methods and utilize each of their advantages with the technique of operant conditioning of multiple-task behaviors in animals and, if necessary, with brain-machine interface technology to verify the accuracy of neural information detected as cell-assembly activity.
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Affiliation(s)
- Yoshio Sakurai
- Laboratory of Neural Information, Graduate School of Brain Science, Doshisha University, Kyoto, Japan
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Takahashi S. Episodic-like memory trace in awake replay of hippocampal place cell activity sequences. eLife 2015; 4:e08105. [PMID: 26481131 PMCID: PMC4610117 DOI: 10.7554/elife.08105] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2015] [Accepted: 09/18/2015] [Indexed: 11/13/2022] Open
Abstract
Episodic memory retrieval of events at a specific place and time is effective for future planning. Sequential reactivation of the hippocampal place cells along familiar paths while the animal pauses is well suited to such a memory retrieval process. It is, however, unknown whether this awake replay represents events occurring along the path. Using a subtask switching protocol in which the animal experienced three subtasks as 'what' information in a maze, I here show that the replay represents a trial type, consisting of path and subtask, in terms of neuronal firing timings and rates. The actual trial type to be rewarded could only be reliably predicted from replays that occurred at the decision point. This trial-type representation implies that not only 'where and when' but also 'what' information is contained in the replay. This result supports the view that awake replay is an episodic-like memory retrieval process.
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Affiliation(s)
- Susumu Takahashi
- Laboratory of neural circuitry, Graduate School of Brain Science, Doshisha University, Kyoto, Japan
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Khubieh A, Ratté S, Lankarany M, Prescott SA. Regulation of Cortical Dynamic Range by Background Synaptic Noise and Feedforward Inhibition. Cereb Cortex 2015. [PMID: 26209846 DOI: 10.1093/cercor/bhv157] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023] Open
Abstract
The cortex encodes a broad range of inputs. This breadth of operation requires sensitivity to weak inputs yet non-saturating responses to strong inputs. If individual pyramidal neurons were to have a narrow dynamic range, as previously claimed, then staggered all-or-none recruitment of those neurons would be necessary for the population to achieve a broad dynamic range. Contrary to this explanation, we show here through dynamic clamp experiments in vitro and computer simulations that pyramidal neurons have a broad dynamic range under the noisy conditions that exist in the intact brain due to background synaptic input. Feedforward inhibition capitalizes on those noise effects to control neuronal gain and thereby regulates the population dynamic range. Importantly, noise allows neurons to be recruited gradually and occludes the staggered recruitment previously attributed to heterogeneous excitation. Feedforward inhibition protects spike timing against the disruptive effects of noise, meaning noise can enable the gain control required for rate coding without compromising the precise spike timing required for temporal coding.
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Affiliation(s)
- Ayah Khubieh
- Neurosciences and Mental Health, The Hospital for Sick Children, Toronto, ON, Canada M5G 0A4 School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Stéphanie Ratté
- Neurosciences and Mental Health, The Hospital for Sick Children, Toronto, ON, Canada M5G 0A4 Department of Physiology and the Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Canada
| | - Milad Lankarany
- Neurosciences and Mental Health, The Hospital for Sick Children, Toronto, ON, Canada M5G 0A4 Department of Physiology and the Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Canada
| | - Steven A Prescott
- Neurosciences and Mental Health, The Hospital for Sick Children, Toronto, ON, Canada M5G 0A4 Department of Physiology and the Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Canada
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Abstract
Inhibitory neurons in cortical circuits play critical roles in composing spike timing and oscillatory patterns in neuronal activity. These roles in turn require coherent activation of interneurons at different timescales. To investigate how the local circuitry provides for these activities, we applied resampled cross-correlation analyses to large-scale recordings of neuronal populations in the cornu ammonis 1 (CA1) and CA3 regions of the hippocampus of freely moving rats. Significant counts in the cross-correlation of cell pairs, relative to jittered surrogate spike-trains, allowed us to identify the effective couplings between neurons in CA1 and CA3 hippocampal regions on the timescale of milliseconds. In addition to putative excitatory and inhibitory monosynaptic connections, we uncovered prominent millisecond timescale synchrony between cell pairs, observed as peaks in the central 0 ms bin of cross-correlograms. This millisecond timescale synchrony appeared to be independent of network state, excitatory input, and γ oscillations. Moreover, it was frequently observed between cells of differing putative interneuronal type, arguing against gap junctions as the sole underlying source. Our observations corroborate recent in vitro findings suggesting that inhibition alone is sufficient to synchronize interneurons at such fast timescales. Moreover, we show that this synchronous spiking may cause stronger inhibition and rebound spiking in target neurons, pointing toward a potential function for millisecond synchrony of interneurons in shaping and affecting timing in pyramidal populations within and downstream from the circuit.
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Sakurai Y. Brain-machine interfaces can accelerate clarification of the principal mysteries and real plasticity of the brain. Front Syst Neurosci 2014; 8:104. [PMID: 24904323 PMCID: PMC4033401 DOI: 10.3389/fnsys.2014.00104] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2014] [Accepted: 05/13/2014] [Indexed: 11/15/2022] Open
Abstract
This perspective emphasizes that the brain-machine interface (BMI) research has the potential to clarify major mysteries of the brain and that such clarification of the mysteries by neuroscience is needed to develop BMIs. I enumerate five principal mysteries. The first is “how is information encoded in the brain?” This is the fundamental question for understanding what our minds are and is related to the verification of Hebb’s cell assembly theory. The second is “how is information distributed in the brain?” This is also a reconsideration of the functional localization of the brain. The third is “what is the function of the ongoing activity of the brain?” This is the problem of how the brain is active during no-task periods and what meaning such spontaneous activity has. The fourth is “how does the bodily behavior affect the brain function?” This is the problem of brain-body interaction, and obtaining a new “body” by a BMI leads to a possibility of changes in the owner’s brain. The last is “to what extent can the brain induce plasticity?” Most BMIs require changes in the brain’s neuronal activity to realize higher performance, and the neuronal operant conditioning inherent in the BMIs further enhances changes in the activity.
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Affiliation(s)
- Yoshio Sakurai
- Department of Psychology, Graduate School of Letters, Kyoto University Kyoto, Japan
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10
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Sakurai Y, Song K, Tachibana S, Takahashi S. Volitional enhancement of firing synchrony and oscillation by neuronal operant conditioning: interaction with neurorehabilitation and brain-machine interface. Front Syst Neurosci 2014; 8:11. [PMID: 24567704 PMCID: PMC3915778 DOI: 10.3389/fnsys.2014.00011] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2013] [Accepted: 01/16/2014] [Indexed: 11/27/2022] Open
Abstract
In this review, we focus on neuronal operant conditioning in which increments in neuronal activities are directly rewarded without behaviors. We discuss the potential of this approach to elucidate neuronal plasticity for enhancing specific brain functions and its interaction with the progress in neurorehabilitation and brain-machine interfaces. The key to-be-conditioned activities that this paper emphasizes are synchronous and oscillatory firings of multiple neurons that reflect activities of cell assemblies. First, we introduce certain well-known studies on neuronal operant conditioning in which conditioned enhancements of neuronal firing were reported in animals and humans. These studies demonstrated the feasibility of volitional control over neuronal activity. Second, we refer to the recent studies on operant conditioning of synchrony and oscillation of neuronal activities. In particular, we introduce a recent study showing volitional enhancement of oscillatory activity in monkey motor cortex and our study showing selective enhancement of firing synchrony of neighboring neurons in rat hippocampus. Third, we discuss the reasons for emphasizing firing synchrony and oscillation in neuronal operant conditioning, the main reason being that they reflect the activities of cell assemblies, which have been suggested to be basic neuronal codes representing information in the brain. Finally, we discuss the interaction of neuronal operant conditioning with neurorehabilitation and brain-machine interface (BMI). We argue that synchrony and oscillation of neuronal firing are the key activities required for developing both reliable neurorehabilitation and high-performance BMI. Further, we conclude that research of neuronal operant conditioning, neurorehabilitation, BMI, and system neuroscience will produce findings applicable to these interrelated fields, and neuronal synchrony and oscillation can be a common important bridge among all of them.
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Affiliation(s)
- Yoshio Sakurai
- Department of Psychology, Graduate School of Letters, Kyoto University Kyoto, Japan
| | - Kichan Song
- Department of Psychology, Graduate School of Letters, Kyoto University Kyoto, Japan
| | - Shota Tachibana
- Department of Psychology, Graduate School of Letters, Kyoto University Kyoto, Japan
| | - Susumu Takahashi
- Laboratory of Neural Circuitry, Graduate School of Brain Science, Doshisha University Kizugawa, Japan
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Tewari S, Parpura V. A possible role of astrocytes in contextual memory retrieval: An analysis obtained using a quantitative framework. Front Comput Neurosci 2013; 7:145. [PMID: 24204341 PMCID: PMC3817599 DOI: 10.3389/fncom.2013.00145] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2013] [Accepted: 10/03/2013] [Indexed: 11/13/2022] Open
Abstract
The hippocampus is central to our understanding of memory formation and retrieval. Its CA1 region is known for encoding contextual memory. Here, using a computational approach, which embeds existing physiological data, we propose a particular role of astrocytes in contextual memory retrieval. We provide a quantitative framework under which the astrocyte modulates the firing of a context-associated CA1 pyramidal neurons, resulting in a prominent tuning of neurons to a delta rhythm. Using the very framework, we further studied astrocytic function in the modulation of neuronal firing under pathological conditions, i.e., during astrocytic induction of epileptiform discharge in CA1 pyramidal neurons. Thus, we provide a quantitative framework that would aid understanding of the Schaffer collateral-CA1 tripartite synapse in health and disease.
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Affiliation(s)
- Shivendra Tewari
- Biotechnology and Bioengineering Center, Medical College of Wisconsin Milwaukee, WI, USA ; Department of Physiology, Medical College of Wisconsin Milwaukee, WI, USA
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Synchronous firing of antennal-lobe projection neurons encodes the behaviorally effective ratio of sex-pheromone components in male Manduca sexta. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2013; 199:963-79. [PMID: 24002682 DOI: 10.1007/s00359-013-0849-z] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2013] [Revised: 08/06/2013] [Accepted: 08/08/2013] [Indexed: 10/26/2022]
Abstract
Olfactory stimuli that are essential to an animal's survival and reproduction are often complex mixtures of volatile organic compounds in characteristic proportions. Here, we investigated how these proportions are encoded in the primary olfactory processing center, the antennal lobe, of male Manduca sexta moths. Two key components of the female's sex pheromone, present in an approximately 2:1 ratio, are processed in each of two neighboring glomeruli in the macroglomerular complex (MGC) of males of this species. In wind-tunnel flight experiments, males exhibited behavioral selectivity for ratios approximating the ratio released by conspecific females. The ratio between components was poorly represented, however, in the firing-rate output of uniglomerular MGC projection neurons (PNs). PN firing rate was mostly insensitive to the ratio between components, and individual PNs did not exhibit a preference for a particular ratio. Recording simultaneously from pairs of PNs in the same glomerulus, we found that the natural ratio between components elicited the most synchronous spikes, and altering the proportion of either component decreased the proportion of synchronous spikes. The degree of synchronous firing between PNs in the same glomerulus thus selectively encodes the natural ratio that most effectively evokes the natural behavioral response to pheromone.
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Takahashi S. Hierarchical organization of context in the hippocampal episodic code. eLife 2013; 2:e00321. [PMID: 23390588 PMCID: PMC3564448 DOI: 10.7554/elife.00321] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2012] [Accepted: 12/26/2012] [Indexed: 02/05/2023] Open
Abstract
The hippocampal system appears to be critically important in establishing episodic memory of both internal and external events within contexts as well as spatial memory, which enables flexible spatial navigation. However, the neuronal substrates that function across different memories in the hippocampal system are poorly understood. I monitored large-scale activity patterns of hippocampal neuronal ensembles in rats performing a novel, continuous task that combined one visually guided and two memory-guided types of navigations in a constant environment. I found that the activity patterns of the hippocampal ensemble represent spatiotemporal contexts (journeys) constructed by temporally ordered past, present and expected future places in tandem with visually or mnemonically guided non-spatial contexts (task-demands) to form episodes. This finding therefore suggests that the hierarchical organization of contexts based on pattern separation and completion enables the hippocampus to play a dual role in spatial navigation and recall of episodic memory. DOI:http://dx.doi.org/10.7554/eLife.00321.001 A little over 10 years ago, researchers discovered that a brain region called the hippocampus is larger in London taxi drivers than it is in the general population. This tied in with results from animal studies, which had revealed a key role for the hippocampus in spatial navigation and memory. However, other work has shown that the hippocampus is equally important for remembering personal experiences—a form of memory known as episodic memory. Many neurons in the hippocampus display ‘place fields', which means that they fire bursts of action potentials whenever an animal is in a specific location. Place fields tend to remain stable during repeated visits to an environment: the same cells fire whenever the animal returns to a particular place. However, if the animal enters a new environment, a neuron might adopt a different place field or not show any place field at all. This phenomenon is known as remapping. Now, Takahashi has provided further insight into the circumstances under which such remapping occurs. He recorded from large numbers of neurons in the rat hippocampus—in a subregion called CA1—as the animals moved through a maze shaped like a digital figure ‘8'. The rats had to perform three tasks within the maze: one guided by visual cues, and two that were memory-based. In the visual task, a light informed the rats to turn either left or right to obtain a reward. In the first memory task, the rats had to alternate their choices to obtain the reward, running through the maze from right-to-left and then from left-to-right (non-delayed spatial alternation). The second memory task worked the same way, except that the rats had to wait 5 s before turning left or right (delayed spatial alternation). Takahashi compared the responses of hippocampal CA1 neurons as rats performed the three tasks. As expected, he found that neurons tended to remap their place fields based on the animal's initial and final locations in the maze, regardless of which task the animal was performing. Surprisingly, however, neurons with specific place fields distinguished between the three tasks by firing at different rates in each. By combining information about the locations and rates at which large assemblies of neurons fired, Takahashi found that he could accurately predict which task a rat had been performing, where it had come from, and where it had ended up, because the place field remapping was hierarchically organized. Moreover, the prediction could be made even before the rat had completed the task. Overall, these results add to our understanding of how the hippocampus performs its dual roles in spatial navigation and episodic memory. DOI:http://dx.doi.org/10.7554/eLife.00321.002
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Affiliation(s)
- Susumu Takahashi
- Laboratory of Neural Circuitry, Graduate School of Brain Science , Doshisha University , Kizugawa , Japan ; Precursory Research for Embryonic Science and Technology (PRESTO) , Japan Science and Technology Agency , Kawaguchi , Japan ; Faculty of Computer Science and Engineering , Kyoto Sangyo University , Kyoto , Japan
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Sakurai Y, Takahashi S. Conditioned enhancement of firing rates and synchrony of hippocampal neurons and firing rates of motor cortical neurons in rats. Eur J Neurosci 2012. [PMID: 23205876 DOI: 10.1111/ejn.12070] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The aim of this study was to examine the potential ability of neuronal groups to enhance their activities by conditioning without behaviors. We employed a method of neuronal operant conditioning in which increments in the firing rates and synchrony of closely neighboring neurons in the motor cortex and hippocampus were rewarded in the absence of behaviors. Rats were trained to engage in a free-operant task in which nose-poke behaviors were rewarded in session 1, and firing rates and synchrony above preset criteria were rewarded in sessions 2 and 3, respectively. The firing rates of motor cortical and hippocampal neuron groups were found to increase rapidly in session 2 similarly to the nose-poke behavior in session 1. Placing contingency of reward on firing synchrony resulted in selective enhancement of firing synchrony of only hippocampal neurons in session 3. Control experiments revealed that the enhancement of neuronal firing was not attributable to increments of superstitious behaviors or excitation caused by reward delivery. Analysis of the firing rates and synchrony of individual neurons and neuron pairs in each group revealed that the firing rates and synchrony of some but not all neurons and neuron pairs increased in each group. No enhancement was observed in any neurons and neuron pairs recorded by neighboring electrodes not used for conditioning. These results suggest that neuronal operant conditioning enhances the firing rates and synchrony of only some neurons in small restricted areas. The present findings are expected to contribute to further research into neurorehabilitation and neuroprosthesis.
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Affiliation(s)
- Yoshio Sakurai
- Department of Psychology, Graduate School of Letters, Kyoto University, Kyoto, 606-8501, Japan.
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Tigerholm J, Migliore M, Fransén E. Integration of synchronous synaptic input in CA1 pyramidal neuron depends on spatial and temporal distributions of the input. Hippocampus 2012; 23:87-99. [PMID: 22996230 DOI: 10.1002/hipo.22061] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/16/2012] [Indexed: 11/09/2022]
Abstract
Highly synchronized neural firing has been discussed in relation to learning and memory, for instance sharp-wave activity in hippocampus. We were interested to study how a postsynaptic CA1 pyramidal neuron would integrate input of different levels of synchronicity. In previous work using computational modeling we studied how the integration depends on dendritic conductances. We found that the transient A-type potassium channel K(A) was able to selectively suppress input of high synchronicity. In recent years, compartmentalization of dendritic integration has been shown. We were therefore interested to study the influence of localization and pattern of synaptic input over the dendritic tree of the CA1 pyramidal neuron. We find that the selective suppression increases when synaptic inputs are placed on oblique dendrites further out from the soma. The suppression also increases along the radial axis from the apical trunk out to the end of oblique dendrites. We also find that the K(A) channel suppresses the occurrence of dendritic spikes. Moreover, recent studies have shown interaction between synaptic inputs. We therefore studied the influence of apical tuft input on the integration studied above. We find that excitatory input provides a modulatory influence reducing the capacity of K(A) to suppress synchronized activity, thus facilitating the excitatory drive of oblique dendritic input. Conversely, inhibitory tuft input increases the suppression by K(A) providing a larger control of oblique depolarizing factors on the CA1 pyramidal neuron in terms of what constitutes the most effective level of synchronicity. Furthermore, we show that the selective suppression studied above depends on the conductance of the K(A) channel. K(A) , as several other potassium channels, is modulated by several neuromodulators, for instance acetylcholine and dopamine, both of which have been discussed in relation to learning and memory. We suggest that dendritic conductances and their modulatory systems may be part of the regulation of processing of information, in particular for how network synchronicity affects learning and memory.
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Affiliation(s)
- Jenny Tigerholm
- Department of Computational Biology, School of Computer Science and Communication, KTH Royal Institute of Technology, SE-106 91 Stockholm, Sweden.
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Vinnik E, Antopolskiy S, Itskov PM, Diamond ME. Auditory stimuli elicit hippocampal neuronal responses during sleep. Front Syst Neurosci 2012; 6:49. [PMID: 22754507 PMCID: PMC3384222 DOI: 10.3389/fnsys.2012.00049] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2012] [Accepted: 05/29/2012] [Indexed: 11/13/2022] Open
Abstract
To investigate how hippocampal neurons code behaviorally salient stimuli, we recorded from neurons in the CA1 region of hippocampus in rats while they learned to associate the presence of sound with water reward. Rats learned to alternate between two reward ports at which, in 50% of the trials, sound stimuli were presented followed by water reward after a 3-s delay. Sound at the water port predicted subsequent reward delivery in 100% of the trials and the absence of sound predicted reward omission. During this task, 40% of recorded neurons fired differently according to which of the two reward ports the rat was visiting. A smaller fraction of neurons demonstrated onset response to sound/nosepoke (19%) and reward delivery (24%). When the sounds were played during passive wakefulness, 8% of neurons responded with short latency onset responses; 25% of neurons responded to sounds when they were played during sleep. During sleep the short-latency responses in hippocampus are intermingled with long lasting responses which in the current experiment could last for 1-2 s. Based on the current findings and the results of previous experiments we described the existence of two types of hippocampal neuronal responses to sounds: sound-onset responses with very short latency and longer-lasting sound-specific responses that are likely to be present when the animal is actively engaged in the task.
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Affiliation(s)
- Ekaterina Vinnik
- Tactile Perception and Learning Laboratory, Scuola Internazionale Superiore di Studi Avanzati Trieste, Italy
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17
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Schaffer-specific local field potentials reflect discrete excitatory events at gamma frequency that may fire postsynaptic hippocampal CA1 units. J Neurosci 2012; 32:5165-76. [PMID: 22496562 DOI: 10.1523/jneurosci.4499-11.2012] [Citation(s) in RCA: 56] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Information processing and exchange between brain nuclei are made through spike series sent by individual neurons in highly irregular temporal patterns. Synchronization in cell assemblies, proposed as a network language for internal neural representations, still has little experimental support. We use a novel technique to extract pathway-specific local field potentials (LFPs) in the hippocampus to explore the ongoing temporal structure of a single presynaptic input, the CA3 Schaffer pathway, and its contribution to the spontaneous output of CA1 units in anesthetized rat. We found that Schaffer-specific LFPs are composed of a regular succession of pulse-like excitatory packages initiated by spontaneous clustered firing of CA3 pyramidal cells to which individual units contribute variably. A fraction of these packages readily induce firing of CA1 pyramidal cells and interneurons, the so-called Schaffer-driven spikes, revealing the presynaptic origin in the output code of single CA1 units. The output of 70% of CA1 pyramidal neurons contains up to 10% of such spikes. Our results suggest a hierarchical internal operation of the CA3 region based on sequential oscillatory activation of pyramidal cell assemblies whose activity partly gets in the output code at the next station. We conclude that CA1 output may directly reflect the activity of specific ensembles of CA3 neurons. Thus, the fine temporal structure of pathway-specific LFPs, as an accurate readout of the activity of a presynaptic population, is useful in searching for hidden presynaptic code in irregular spikes series of individual neurons and assemblies.
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18
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State-space analysis of time-varying higher-order spike correlation for multiple neural spike train data. PLoS Comput Biol 2012; 8:e1002385. [PMID: 22412358 PMCID: PMC3297562 DOI: 10.1371/journal.pcbi.1002385] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2011] [Accepted: 12/28/2011] [Indexed: 11/23/2022] Open
Abstract
Precise spike coordination between the spiking activities of multiple neurons is suggested as an indication of coordinated network activity in active cell assemblies. Spike correlation analysis aims to identify such cooperative network activity by detecting excess spike synchrony in simultaneously recorded multiple neural spike sequences. Cooperative activity is expected to organize dynamically during behavior and cognition; therefore currently available analysis techniques must be extended to enable the estimation of multiple time-varying spike interactions between neurons simultaneously. In particular, new methods must take advantage of the simultaneous observations of multiple neurons by addressing their higher-order dependencies, which cannot be revealed by pairwise analyses alone. In this paper, we develop a method for estimating time-varying spike interactions by means of a state-space analysis. Discretized parallel spike sequences are modeled as multi-variate binary processes using a log-linear model that provides a well-defined measure of higher-order spike correlation in an information geometry framework. We construct a recursive Bayesian filter/smoother for the extraction of spike interaction parameters. This method can simultaneously estimate the dynamic pairwise spike interactions of multiple single neurons, thereby extending the Ising/spin-glass model analysis of multiple neural spike train data to a nonstationary analysis. Furthermore, the method can estimate dynamic higher-order spike interactions. To validate the inclusion of the higher-order terms in the model, we construct an approximation method to assess the goodness-of-fit to spike data. In addition, we formulate a test method for the presence of higher-order spike correlation even in nonstationary spike data, e.g., data from awake behaving animals. The utility of the proposed methods is tested using simulated spike data with known underlying correlation dynamics. Finally, we apply the methods to neural spike data simultaneously recorded from the motor cortex of an awake monkey and demonstrate that the higher-order spike correlation organizes dynamically in relation to a behavioral demand. Nearly half a century ago, the Canadian psychologist D. O. Hebb postulated the formation of assemblies of tightly connected cells in cortical recurrent networks because of changes in synaptic weight (Hebb's learning rule) by repetitive sensory stimulation of the network. Consequently, the activation of such an assembly for processing sensory or behavioral information is likely to be expressed by precisely coordinated spiking activities of the participating neurons. However, the available analysis techniques for multiple parallel neural spike data do not allow us to reveal the detailed structure of transiently active assemblies as indicated by their dynamical pairwise and higher-order spike correlations. Here, we construct a state-space model of dynamic spike interactions, and present a recursive Bayesian method that makes it possible to trace multiple neurons exhibiting such precisely coordinated spiking activities in a time-varying manner. We also formulate a hypothesis test of the underlying dynamic spike correlation, which enables us to detect the assemblies activated in association with behavioral events. Therefore, the proposed method can serve as a useful tool to test Hebb's cell assembly hypothesis.
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Itskov PM, Vinnik E, Honey C, Schnupp J, Diamond ME. Sound sensitivity of neurons in rat hippocampus during performance of a sound-guided task. J Neurophysiol 2012; 107:1822-34. [PMID: 22219030 DOI: 10.1152/jn.00404.2011] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Abstract
To investigate how hippocampal neurons encode sound stimuli, and the conjunction of sound stimuli with the animal's position in space, we recorded from neurons in the CA1 region of hippocampus in rats while they performed a sound discrimination task. Four different sounds were used, two associated with water reward on the right side of the animal and the other two with water reward on the left side. This allowed us to separate neuronal activity related to sound identity from activity related to response direction. To test the effect of spatial context on sound coding, we trained rats to carry out the task on two identical testing platforms at different locations in the same room. Twenty-one percent of the recorded neurons exhibited sensitivity to sound identity, as quantified by the difference in firing rate for the two sounds associated with the same response direction. Sensitivity to sound identity was often observed on only one of the two testing platforms, indicating an effect of spatial context on sensory responses. Forty-three percent of the neurons were sensitive to response direction, and the probability that any one neuron was sensitive to response direction was statistically independent from its sensitivity to sound identity. There was no significant coding for sound identity when the rats heard the same sounds outside the behavioral task. These results suggest that CA1 neurons encode sound stimuli, but only when those sounds are associated with actions.
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Affiliation(s)
- Pavel M Itskov
- Behavior and Metabolism Laboratory, Champalimaud Neuroscience Program, Champalimaud Center for the Unknown, Av. Brasília s/n (Doca de Pedrouços 400-038 Lisbon, Portugal.
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20
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Hori E, Tabuchi E, Matsumura N, Ono T, Nishijo H. Task-dependent and independent synchronous activity of monkey hippocampal neurons in real and virtual translocation. Front Behav Neurosci 2011; 5:36. [PMID: 21808612 PMCID: PMC3139221 DOI: 10.3389/fnbeh.2011.00036] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2011] [Accepted: 06/24/2011] [Indexed: 11/13/2022] Open
Abstract
Previous neurophysiological and behavioral studies relate hippocampal functions to place learning and memory, and encoding of task (or context)-specific information. Encoding of both task-specific information and own location is essential for episodic memory and for animals to navigate to reward-related places. It is suggested that different neural circuits with different assemblies of different hippocampal neurons are created in different environments or behavioral contexts for the hippocampal formation (HF) to encode and retrieve episodic memory. To investigate whether synchronous activity of hippocampal neurons, suggesting functional connectivity between those neurons, is task and position dependent, multiple single unit activities were recorded during performance of real and virtual translocation (VT) tasks. The monkey moved to one of four reward areas by driving a cab (real translocation) or by moving a pointer on a monitor. Of 163 neuron pairs, significant peaks in cross-correlograms (CCGs) were observed in 98 pairs. Most CCGs had positive peaks within 50 ms. Task-dependent cross-correlations (CCRs) were observed in 44% of the neuron pairs, and similarly observed in both the real and VT tasks. These CCRs were frequently observed in pyramidal vs. pyramidal neuron pairs with positive peak and peak shift. However, no consistent patterns of peak polarity, peak shift, and neuronal types were seen in task-independent CCRs. There was no significant difference in frequency of CCG peaks between real and VT tasks. These results suggest that the task-dependent information may be encoded by interaction among pyramidal neurons, and the common information across tasks may be encoded by interaction among pyramidal neurons and interneurons in the HF. These neuronal populations could provide a neural basis for episodic memory to disambiguously guide animals to places associated with reward in different situations.
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Affiliation(s)
- Etsuro Hori
- System Emotional Science, Graduate School of Medicine and Pharmaceutical Sciences, University of Toyama Toyama, Japan
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21
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Mitelman R, Rosin B, Zadka H, Slovik M, Heimer G, Ritov Y, Bergman H, Elias S. Neighboring Pallidal Neurons Do Not Exhibit more Synchronous Oscillations than Remote Ones in the MPTP Primate Model of Parkinson's Disease. Front Syst Neurosci 2011; 5:54. [PMID: 21747760 PMCID: PMC3129135 DOI: 10.3389/fnsys.2011.00054] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2010] [Accepted: 06/13/2011] [Indexed: 11/25/2022] Open
Abstract
In the healthy primate, neurons of the external and internal segments of the globus pallidus (GP) present a primarily irregular firing pattern, and a negligible level of synchrony is observed between pairs of neurons. This holds even for neighboring cells, despite their higher probability to receive common inputs and to innervate each other via lateral connectivity. In the Parkinsonian primate, this changes drastically, and many pairs of GP cells show synchronous oscillations. To address the relation between distance and synchrony in the Parkinsonian state, we compared the synchrony of discharge of close pairs of neurons, recorded by the same electrode, with remote pairs, recorded by different ones. However, spike trains of neighboring cells recorded by the same extracellular electrode exhibit the shadowing effect; i.e., lack of detection of spikes that occur within a few milliseconds of each other. Here, we demonstrate that the shadowing artifact can both induce apparent correlations between non-correlated neurons, as well as conceal existing correlations between neighboring ones. We therefore introduced artificial shadowing in the remote pairs, similar to the effect we observed in the close ones. After the artificial shadowing, neighboring cells did not show a higher tendency to oscillate synchronously than remote ones. On the contrary, the average percentage (over all sessions) of artificially shadowed remote pairs exhibiting synchronous oscillations was 35.4% compared to 17.2% in the close ones. Similar trend was found when the unshadowed remote pairs were separated according to the estimated distance between electrode tips: 29.9% of pairs at approximate distance of less than 750 μm were significantly synchronized, in comparison with 28.5% of the pairs whose distance was more than 750 μm. We conclude that the synchronous oscillations in the GP of MPTP treated primates are homogenously distributed.
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Affiliation(s)
- Rea Mitelman
- Department of Medical Neurobiology, Institute of Medical Research Israel-Canada, The Hebrew University - Hadassah Medical School Jerusalem, Israel
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Baslow MH. The Vertebrate Brain, Evidence of Its Modular Organization and Operating System: Insights into the Brain's Basic Units of Structure, Function, and Operation and How They Influence Neuronal Signaling and Behavior. Front Behav Neurosci 2011; 5:5. [PMID: 21720525 PMCID: PMC3118634 DOI: 10.3389/fnbeh.2011.00005] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2010] [Accepted: 01/25/2011] [Indexed: 11/13/2022] Open
Abstract
The human brain is a complex organ made up of neurons and several other cell types, and whose role is processing information for use in eliciting behaviors. However, the composition of its repeating cellular units for both structure and function are unresolved. Based on recent descriptions of the brain's physiological "operating system", a function of the tri-cellular metabolism of N-acetylaspartate (NAA) and N-acetylaspartylglutamate (NAAG) for supply of energy, and on the nature of "neuronal words and languages" for intercellular communication, insights into the brain's modular structural and functional units have been gained. In this article, it is proposed that the basic structural unit in brain is defined by its physiological operating system, and that it consists of a single neuron, and one or more astrocytes, oligodendrocytes, and vascular system endothelial cells. It is also proposed that the basic functional unit in the brain is defined by how neurons communicate, and consists of two neurons and their interconnecting dendritic-synaptic-dendritic field. Since a functional unit is composed of two neurons, it requires two structural units to form a functional unit. Thus, the brain can be envisioned as being made up of the three-dimensional stacking and intertwining of myriad structural units which results not only in its gross structure, but also in producing a uniform distribution of binary functional units. Since the physiological NAA-NAAG operating system for supply of energy is repeated in every structural unit, it is positioned to control global brain function.
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Affiliation(s)
- Morris H Baslow
- Center for Neurochemistry, Nathan S. Kline Institute for Psychiatric Research Orangeburg, NY, USA
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Submillisecond firing synchrony between different subtypes of cortical interneurons connected chemically but not electrically. J Neurosci 2011; 31:3351-61. [PMID: 21368047 DOI: 10.1523/jneurosci.4881-10.2011] [Citation(s) in RCA: 72] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Synchronous firing is commonly observed in the brain, but its underlying mechanisms and neurobiological meaning remain debated. Most commonly, synchrony is attributed either to electrical coupling by gap junctions or to shared excitatory inputs. In the cerebral cortex and hippocampus, fast-spiking (FS) or somatostatin-containing (SOM) inhibitory interneurons are electrically coupled to same-type neighbors, and each subtype-specific network tends to fire in synchrony. Electrical coupling across subtypes is weak or absent, but SOM-FS and FS-FS pairs are often connected by inhibitory synapses. Theoretical studies suggest that purely inhibitory coupling can also promote synchrony; however, this has not been confirmed experimentally. We recorded from 74 pairs of electrically noncoupled layer 4 interneurons in mouse somatosensory cortex in vitro, and found that tonically depolarized FS-FS and SOM-FS pairs connected by unidirectional or bidirectional inhibitory synapses often fired within 1 ms of each other. Using a novel, jitter-based measure of synchrony, we found that synchrony correlated with inhibitory coupling strength. Importantly, synchrony was resistant to ionotropic glutamate receptors antagonists but was strongly reduced when GABA(A) receptors were blocked, confirming that in our experimental system IPSPs were both necessary and sufficient for synchrony. Submillisecond firing lags emerged in a computer simulation of pairs of spiking neurons, in which the only assumed interaction between neurons was by inhibitory synapses. We conclude that cortical interneurons are capable of synchronizing both within and across subtypes, and that submillisecond coordination of firing can arise by mutual synaptic inhibition alone, with neither shared inputs nor electrical coupling.
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Doucette W, Gire DH, Whitesell J, Carmean V, Lucero MT, Restrepo D. Associative cortex features in the first olfactory brain relay station. Neuron 2011; 69:1176-87. [PMID: 21435561 PMCID: PMC3064824 DOI: 10.1016/j.neuron.2011.02.024] [Citation(s) in RCA: 111] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/12/2011] [Indexed: 11/23/2022]
Abstract
Synchronized firing of mitral cells (MCs) in the olfactory bulb (OB) has been hypothesized to help bind information together in olfactory cortex (OC). In this survey of synchronized firing by suspected MCs in awake, behaving vertebrates, we find the surprising result that synchronized firing conveys information on odor value ("Is it rewarded?") rather than odor identity ("What is the odor?"). We observed that as mice learned to discriminate between odors, synchronous firing responses to the rewarded and unrewarded odors became divergent. Furthermore, adrenergic blockage decreases the magnitude of odor divergence of synchronous trains, suggesting that MCs contribute to decision-making through adrenergic-modulated synchronized firing. Thus, in the olfactory system information on stimulus reward is found in MCs one synapse away from the sensory neuron.
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Affiliation(s)
- Wilder Doucette
- Department of Cell and Developmental Biology, University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA
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Functional imaging of hippocampal place cells at cellular resolution during virtual navigation. Nat Neurosci 2010; 13:1433-40. [PMID: 20890294 PMCID: PMC2967725 DOI: 10.1038/nn.2648] [Citation(s) in RCA: 530] [Impact Index Per Article: 37.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2010] [Accepted: 09/01/2010] [Indexed: 11/09/2022]
Abstract
Spatial navigation is often used as a behavioral task in studies of the neuronal circuits that underlie cognition, learning and memory in rodents. The combination of in vivo microscopy with genetically encoded indicators has provided an important new tool for studying neuronal circuits, but has been technically difficult to apply during navigation. Here we describe methods for imaging the activity of neurons in the CA1 region of the hippocampus with subcellular resolution in behaving mice. Neurons that expressed the genetically encoded calcium indicator GCaMP3 were imaged through a chronic hippocampal window. Head-restrained mice performed spatial behaviors in a setup combining a virtual reality system and a custom-built two-photon microscope. We optically identified populations of place cells and determined the correlation between the location of their place fields in the virtual environment and their anatomical location in the local circuit. The combination of virtual reality and high-resolution functional imaging should allow a new generation of studies to investigate neuronal circuit dynamics during behavior.
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Quantification of clustering in joint interspike interval scattergrams of spike trains. Biophys J 2010; 98:2535-43. [PMID: 20513397 DOI: 10.1016/j.bpj.2010.03.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2009] [Revised: 02/17/2010] [Accepted: 03/09/2010] [Indexed: 10/19/2022] Open
Abstract
Joint interval scattergrams are usually employed in determining serial correlations between events of spike trains. However, any inherent structures in such scattergrams that are often seen in experimental records are not quantifiable by serial correlation coefficients. Here, we develop a method to quantify clustered structures in any two-dimensional scattergram of pairs of interspike intervals. The method gives a cluster coefficient as well as clustering density function that could be used to quantify clustering in scattergrams obtained from first- or higher-order interval return maps of single spike trains, or interspike interval pairs drawn from simultaneously recorded spike trains. The method is illustrated using numerical spike trains as well as in vitro pairwise recordings of rat striatal tonically active neurons.
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