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Limayem A, Martin EM, Shankar S. Study on the citrus greening disease: Current challenges and novel therapies. Microb Pathog 2024; 192:106688. [PMID: 38750772 DOI: 10.1016/j.micpath.2024.106688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Revised: 05/06/2024] [Accepted: 05/12/2024] [Indexed: 05/25/2024]
Abstract
The unprecedented worldwide spread of the Citrus greening disorder, called Huanglongbing (HLB), has urged researchers for rapid interventions. HLB poses a considerable threat to global citriculture owing to its devastating impact on citrus species. This disease is caused by Candidatus Liberibacter species (CLs), primarily transferred through psyllid insects, such as Trioza erytreae and Diaphorina citri. It results in phloem malfunction, root decline, and altered plant source-sink relationships, leading to a deficient plant with minimal yield before it dies. Thus, many various techniques have been employed to eliminate HLB and control vector populations through the application of insecticides and antimicrobials. The latter have evidenced short-term efficiency. While nucleic acid-based analyses and symptom-based identification of the disease have been used for detection, they suffer from limitations such as false negatives, complex sample preparation, and high costs. To address these challenges, secreted protein-based biomarkers offer a promising solution for accurate, rapid, and cost-effective disease detection. This paper presents an overview of HLB symptoms in citrus plants, including leaf and fruit symptoms, as well as whole tree symptoms. The differentiation between HLB symptoms and those of nutrient deficiencies is discussed, emphasizing the importance of precise identification for effective disease management. The elusive nature of CLs and the challenges in culturing them in axenic cultures have hindered the understanding of their pathogenic mechanisms. However, genome sequencing has provided insights into CLs strains' metabolic traits and potential virulence factors. Efforts to identify potential host target genes for resistance are discussed, and a high-throughput antimicrobial testing method using Citrus hairy roots is introduced as a promising tool for rapid assessment of potential treatments. This review summarizes current challenges and novel therapies for HLB disease. It highlights the urgency of developing accurate and efficient detection methods and identifying the complex relations between CLs and their host plants. Transgenic citrus in conjunction with secreted protein-based biomarkers and innovative testing methodologies could revolutionize HLB management strategies toward achieving a sustainable citrus cultivation. It offers more reliable and practical solutions to combat this devastating disease and safeguard the global citriculture industry.
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Affiliation(s)
- Alya Limayem
- Department of Biology, College of Arts & Sciences, University of North Florida, Jacksonville, FL, USA
| | - Elizabeth M Martin
- Food Science, Department of Biological and Agricultural Engineering, University of Arkansas, AR, USA
| | - Shiv Shankar
- Research Laboratories in Science, Applied to Food, INRS-Armand-Frappier Health and Biotechnology Centre, Laval, Quebec, Canada; School of Food Science and Environmental Health, Grangegorman, Technological University Dublin, Dublin, Ireland.
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Kwakye S, Kadyampakeni DM. Micronutrients Improve Growth and Development of HLB-Affected Citrus Trees in Florida. PLANTS (BASEL, SWITZERLAND) 2022; 12:73. [PMID: 36616206 PMCID: PMC9824839 DOI: 10.3390/plants12010073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 12/03/2022] [Accepted: 12/17/2022] [Indexed: 06/17/2023]
Abstract
Enhanced nutritional programs (ENPs) have improved citrus trees' growth and development in the era of Huanglongbing (HLB). Studies conducted with variable rates of manganese (Mn) and Iron (Fe) on young HLB-affected citrus trees showed that applying double the standard recommendation increased growth and biomass accumulation. Since HLB is believed to cause deficiency symptoms of micronutrients in citrus trees, it is critical to ensure their optimal levels in the leaves. This could be achieved by soil application of either a Mn rate of 8.9 to 11.5 kg ha-1 as MnSO4 (31%) for young HLB-affected 'Valencia' (Citrus sinensis (L.) Osbeck) citrus trees or an Fe rate of 9.6 to 11.8 kg ha-1 as Ferrous sulfate heptahydrate (20%) for 'Bingo' (Citrus reticulata, Blanco) citrus trees. Maintaining optimal levels of these micronutrients may enable citrus trees to carry out photosynthetic activities to ensure growth and development. It may also help the tree in the regulation of various physiological processes as part of the antioxidant enzyme Mn-superoxidase dismutase (SOD). Micronutrient manipulation through variable rates of fertilizer application to influence nutrient availability is an important mitigating factor for HLB-affected citrus trees and an integral component of citrus production in Florida.
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Yang C, Ancona V. An Overview of the Mechanisms Against " Candidatus Liberibacter asiaticus": Virulence Targets, Citrus Defenses, and Microbiome. Front Microbiol 2022; 13:850588. [PMID: 35391740 PMCID: PMC8982080 DOI: 10.3389/fmicb.2022.850588] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Accepted: 02/18/2022] [Indexed: 12/01/2022] Open
Abstract
Citrus Huanglongbing (HLB) or citrus greening, is the most destructive disease for citrus worldwide. It is caused by the psyllid-transmitted, phloem-limited bacteria "Candidatus Liberibacter asiaticus" (CLas). To date, there are still no effective practical strategies for curing citrus HLB. Understanding the mechanisms against CLas can contribute to the development of effective approaches for combatting HLB. However, the unculturable nature of CLas has hindered elucidating mechanisms against CLas. In this review, we summarize the main aspects that contribute to the understanding about the mechanisms against CLas, including (1) CLas virulence targets, focusing on inhibition of virulence genes; (2) activation of citrus host defense genes and metabolites of HLB-tolerant citrus triggered by CLas, and by agents; and (3) we also review the role of citrus microbiome in combatting CLas. Finally, we discuss novel strategies to continue studying mechanisms against CLas and the relationship of above aspects.
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Affiliation(s)
- Chuanyu Yang
- Department of Agriculture, Agribusiness, and Environmental Sciences, Citrus Center, Texas A&M University-Kingsville, Weslaco, TX, United States
| | - Veronica Ancona
- Department of Agriculture, Agribusiness, and Environmental Sciences, Citrus Center, Texas A&M University-Kingsville, Weslaco, TX, United States
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De Francesco A, Lovelace AH, Shaw D, Qiu M, Wang Y, Gurung F, Ancona V, Wang C, Levy A, Jiang T, Ma W. Transcriptome Profiling of ' Candidatus Liberibacter asiaticus' in Citrus and Psyllids. PHYTOPATHOLOGY 2022; 112:116-130. [PMID: 35025694 DOI: 10.1094/phyto-08-21-0327-fi] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
'Candidatus Liberibacter asiaticus' (Las) is an emergent bacterial pathogen that is associated with the devastating citrus huanglongbing (HLB). Vectored by the Asian citrus psyllid, Las colonizes the phloem tissue of citrus, causing severe damage to infected trees. So far, cultivating pure Las culture in axenic media has not been successful, and dual-transcriptome analyses aiming to profile gene expression in both Las and its hosts have a low coverage of the Las genome because of the low abundance of bacterial RNA in total RNA extracts from infected tissues. Therefore, a lack of understanding of the Las transcriptome remains a significant knowledge gap. Here, we used a bacterial cell enrichment procedure and confidently determined the expression profiles of approximately 84% of the Las genes. Genes that exhibited high expression in citrus include transporters, ferritin, outer membrane porins, specific pilins, and genes involved in phage-related functions, cell wall modification, and stress responses. We also found 106 genes to be differentially expressed in citrus versus Asian citrus psyllids. Genes related to transcription or translation and resilience to host defense response were upregulated in citrus, whereas genes involved in energy generation and the flagella system were expressed to higher levels in psyllids. Finally, we determined the relative expression levels of potential Sec-dependent effectors, which are considered as key virulence factors of Las. This work advances our understanding of HLB biology and offers novel insight into the interactions of Las with its plant host and insect vector.
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Affiliation(s)
- Agustina De Francesco
- Department of Microbiology and Plant Pathology, University of California, Riverside, CA 92521, U.S.A
| | - Amelia H Lovelace
- The Sainsbury Laboratory, Norwich Research Park, NR4 7UH, United Kingdom
| | - Dipan Shaw
- Department of Computer Science and Engineering, University of California, Riverside, CA 92521, U.S.A
| | - Min Qiu
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing 210095, China
| | - Yuanchao Wang
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing 210095, China
| | - Fatta Gurung
- Citrus Center, Department of Agriculture, Agribusiness and Environmental Sciences, Texas A&M University-Kingsville, Weslaco, TX 78599, U.S.A
| | - Veronica Ancona
- Citrus Center, Department of Agriculture, Agribusiness and Environmental Sciences, Texas A&M University-Kingsville, Weslaco, TX 78599, U.S.A
| | - Chunxia Wang
- Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, U.S.A
| | - Amit Levy
- Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, U.S.A
| | - Tao Jiang
- Department of Computer Science and Engineering, University of California, Riverside, CA 92521, U.S.A
| | - Wenbo Ma
- Department of Microbiology and Plant Pathology, University of California, Riverside, CA 92521, U.S.A
- The Sainsbury Laboratory, Norwich Research Park, NR4 7UH, United Kingdom
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Identification of citrus greening based on visual symptoms: A grower's diagnostic toolkit. Heliyon 2021; 7:e08387. [PMID: 34841106 PMCID: PMC8605348 DOI: 10.1016/j.heliyon.2021.e08387] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 11/01/2021] [Accepted: 11/11/2021] [Indexed: 11/23/2022] Open
Abstract
Citrus greening is one of the world's most serious diseases of citrus that affects all cultivars and causes the systematic death of trees worldwide. The disease is caused mostly by the bacteria Candidatus Liberibacter species. The wind, rain, and touch of infected workers cannot transmit this infectious disease. The Asian Citrus Psyllid (ACP), a minuscule insect, is one of the main vectors that transmit the disease by feeding on citrus leaves. Citrus greening management is also quite expensive since no successful treatment for the cure has been found, except to remove all affected vegetables from healthy crops to eliminate the bacterial spread. Citrus greening is also the most challenging task, as signs of other citrus diseases and nutritional deficiencies are identical. The major signs of this disease are asymmetrical, blotchy mottling patterns on leaves. Here, several visible indications of citrus greening were addressed, which will enable farmers at the root level to detect and avoid this condition prior to its having a dramatic influence on citrus plantations. We also talked about the pen test method to determine symptoms as symmetrical or asymmetrical throughout the mid-vine, regardless of whether they are impacted by citrus greening or lack of nutrients.
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Metagenomic Insight into the Community Structure of Maize-Rhizosphere Bacteria as Predicted by Different Environmental Factors and Their Functioning within Plant Proximity. Microorganisms 2021; 9:microorganisms9071419. [PMID: 34209383 PMCID: PMC8304108 DOI: 10.3390/microorganisms9071419] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Revised: 06/25/2021] [Accepted: 06/25/2021] [Indexed: 11/17/2022] Open
Abstract
The rhizosphere microbiota contributes immensely to nutrient sequestration, productivity and plant growth. Several studies have suggested that environmental factors and high nutrient composition of plant's rhizosphere influence the structural diversity of proximal microorganisms. To verify this assertion, we compare the functional diversity of bacteria in maize rhizosphere and bulk soils using shotgun metagenomics and assess the influence of measured environmental variables on bacterial diversity. Our study showed that the bacterial community associated with each sampling site was distinct, with high community members shared among the samples. The bacterial community was dominated by Proteobacteria, Actinobacteria, Acidobacteria, Gemmatimonadetes, Bacteroidetes and Verrucomicrobia. In comparison, genera such as Gemmatimonas, Streptomyces, Conexibacter, Burkholderia, Bacillus, Gemmata, Mesorhizobium, Pseudomonas and Micromonospora were significantly (p ≤ 0.05) high in the rhizosphere soils compared to bulk soils. Diversity indices showed that the bacterial composition was significantly different across the sites. The forward selection of environmental factors predicted N-NO3 (p = 0.019) as the most influential factor controlling the variation in the bacterial community structure, while other factors such as pH (p = 1.00) and sulfate (p = 0.50) contributed insignificantly to the community structure of bacteria. Functional assessment of the sampling sites, considering important pathways viz. nitrogen metabolism, phosphorus metabolism, stress responses, and iron acquisition and metabolism could be represented as Ls > Rs > Rc > Lc. This revealed that functional hits are higher in the rhizosphere soil than their controls. Taken together, inference from this study shows that the sampling sites are hotspots for biotechnologically important microorganisms.
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Sivager G, Calvez L, Bruyere S, Boisne-Noc R, Brat P, Gros O, Ollitrault P, Morillon R. Specific Physiological and Anatomical Traits Associated With Polyploidy and Better Detoxification Processes Contribute to Improved Huanglongbing Tolerance of the Persian Lime Compared With the Mexican Lime. FRONTIERS IN PLANT SCIENCE 2021; 12:685679. [PMID: 34512684 PMCID: PMC8427660 DOI: 10.3389/fpls.2021.685679] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Accepted: 06/09/2021] [Indexed: 05/13/2023]
Abstract
Huanglongbing (HLB) is presently a major threat to the citrus industry. Because of this disease, millions of trees are currently dying worldwide. The putative causal agent is a motile bacteria belonging to Candidatus Liberibacter spp., which is transmitted by psyllids. The bacteria is responsible for the synthesis of callose at the phloem sieve plate, leading to the obstruction of the pores that provide connections between adjacent sieve elements, thus limiting the symplastic transport of the sugars and starches synthesized in leaves to the other plant organs. The Persian triploid lime (Citrus latifolia) is one of the most HLB-tolerant citrus varieties, but the determinants associated with the tolerance are still unknown. HLB-infected diploid Mexican lime (Citrus aurantiifolia) and Persian lime were investigated. The leaf petiole was analyzed using scanning electron microscopy (SEM) to observe callose deposition at the phloem sieve plate. Leaf starch contents and detoxification enzyme activities were investigated. In the field, Persian lime leaves present more limited symptoms due to HLB than the Mexican lime leaves do. Photosynthesis, stomatal conductance, and transpiration decreased compared with control plants, but values remained greater in the Persian than in the Mexican lime. Analysis of the petiole sieve plate in control petiole samples showed that pores were approximately 1.8-fold larger in the Persian than in the Mexican lime. SEM analyses of petiole samples of symptomatic leaves showed the important deposition of callose into pores of Mexican and Persian limes, whereas biochemical analyses revealed better detoxification in Persian limes than in Mexican limes. Moreover, SEM analyses of infected petiole samples of asymptomatic leaves showed much larger callose depositions into the Mexican lime pores than in the Persian lime pores, whereas biochemical traits revealed much better behavior in Persian limes than in Mexican limes. Our results reveal that polyploids present specific behaviors associated with important physiological and biochemical determinants that may explain the better tolerance of the Persian lime against HLB compared with the Mexican lime.
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Affiliation(s)
- Gary Sivager
- CIRAD, UMR AGAP Institut, Equipe SEAPAG, Petit-Bourg, Guadeloupe, French West Indies—UMR AGAP Institut, Univ. Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Leny Calvez
- CIRAD, UMR AGAP Institut, Equipe SEAPAG, Petit-Bourg, Guadeloupe, French West Indies—UMR AGAP Institut, Univ. Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Saturnin Bruyere
- CIRAD, UMR AGAP Institut, Equipe SEAPAG, Petit-Bourg, Guadeloupe, French West Indies—UMR AGAP Institut, Univ. Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Rosiane Boisne-Noc
- CIRAD, UMR AGAP Institut, Equipe SEAPAG, Petit-Bourg, Guadeloupe, French West Indies—UMR AGAP Institut, Univ. Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Pierre Brat
- CIRAD UMR Qualisud Dpt PERSYST-Qualisud, Univ. Montpellier, Avignon Université, CIRAD, Institut Agro, IRD, Université de La Réunion, Montpellier, France
| | - Olivier Gros
- C3MAG, UFR des Sciences Exactes et Naturelles, Université des Antilles, Pointe-à-Pitre, Guadeloupe
| | - Patrick Ollitrault
- CIRAD, UMR AGAP Institut, Equipe SEAPAG, Petit-Bourg, Guadeloupe, French West Indies—UMR AGAP Institut, Univ. Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Raphaël Morillon
- CIRAD, UMR AGAP Institut, Equipe SEAPAG, Petit-Bourg, Guadeloupe, French West Indies—UMR AGAP Institut, Univ. Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
- *Correspondence: Raphaël Morillon,
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