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García-Vicente C, Gutiérrez-Tobal GC, Jiménez-García J, Martín-Montero A, Gozal D, Hornero R. ECG-based convolutional neural network in pediatric obstructive sleep apnea diagnosis. Comput Biol Med 2023; 167:107628. [PMID: 37918264 DOI: 10.1016/j.compbiomed.2023.107628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 09/28/2023] [Accepted: 10/23/2023] [Indexed: 11/04/2023]
Abstract
Obstructive sleep apnea (OSA) is a prevalent respiratory condition in children and is characterized by partial or complete obstruction of the upper airway during sleep. The respiratory events in OSA induce transient alterations of the cardiovascular system that ultimately can lead to increased cardiovascular risk in affected children. Therefore, a timely and accurate diagnosis is of utmost importance. However, polysomnography (PSG), the standard diagnostic test for pediatric OSA, is complex, uncomfortable, costly, and relatively inaccessible, particularly in low-resource environments, thereby resulting in substantial underdiagnosis. Here, we propose a novel deep-learning approach to simplify the diagnosis of pediatric OSA using raw electrocardiogram tracing (ECG). Specifically, a new convolutional neural network (CNN)-based regression model was implemented to automatically predict pediatric OSA by estimating its severity based on the apnea-hypopnea index (AHI) and deriving 4 OSA severity categories. For this purpose, overnight ECGs from 1,610 PSG recordings obtained from the Childhood Adenotonsillectomy Trial (CHAT) database were used. The database was randomly divided into approximately 60%, 20%, and 20% for training, validation, and testing, respectively. The diagnostic performance of the proposed CNN model largely outperformed the most accurate previous algorithms that relied on ECG-derived features (4-class Cohen's kappa coefficient of 0.373 versus 0.166). Specifically, for AHI cutoff values of 1, 5, and 10 events/hour, the binary classification achieved sensitivities of 84.19%, 76.67%, and 53.66%; specificities of 46.15%, 91.39%, and 98.06%; and accuracies of 75.92%, 86.96%, and 91.97%, respectively. Therefore, pediatric OSA can be readily identified by our proposed CNN model, which provides a simpler, faster, and more accessible diagnostic test that can be implemented in clinical practice.
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Affiliation(s)
| | - Gonzalo C Gutiérrez-Tobal
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Jorge Jiménez-García
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Adrián Martín-Montero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - David Gozal
- Office of The Dean, Joan C. Edwards School of Medicine, Marshall University, 1600 Medical Center Dr, Huntington, WV, 25701, USA
| | - Roberto Hornero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
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Arslan RS. Sleep disorder and apnea events detection framework with high performance using two-tier learning model design. PeerJ Comput Sci 2023; 9:e1554. [PMID: 37810361 PMCID: PMC10557519 DOI: 10.7717/peerj-cs.1554] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 08/04/2023] [Indexed: 10/10/2023]
Abstract
Sleep apnea is defined as a breathing disorder that affects sleep. Early detection of sleep apnea helps doctors to take intervention for patients to prevent sleep apnea. Manually making this determination is a time-consuming and subjectivity problem. Therefore, many different methods based on polysomnography (PSG) have been proposed and applied to detect this disorder. In this study, a unique two-layer method is proposed, in which there are four different deep learning models in the deep neural network (DNN), gated recurrent unit (GRU), recurrent neural network (RNN), RNN-based-long term short term memory (LSTM) architecture in the first layer, and a machine learning-based meta-learner (decision-layer) in the second layer. The strategy of making a preliminary decision in the first layer and verifying/correcting the results in the second layer is adopted. In the training of this architecture, a vector consisting of 23 features consisting of snore, oxygen saturation, arousal and sleep score data is used together with PSG data. A dataset consisting of 50 patients, both children and adults, is prepared. A number of pre-processing and under-sampling applications have been made to eliminate the problem of unbalanced classes. Proposed method has an accuracy of 95.74% and 99.4% in accuracy of apnea detection (apnea, hypopnea and normal) and apnea types detection (central, mixed and obstructive), respectively. Experimental results demonstrate that patient-independent consistent results can be produced with high accuracy. This robust model can be considered as a system that will help in the decisions of sleep clinics where it is expected to detect sleep disorders in detail with high performance.
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Mišić NŽ, Ostojić M, Cvetković S, Miodragović P, Aničić Z, Kovačić Popović A, Stefanović Đ. Wavelet Analysis of Respiratory Muscle sEMG Signals during the Physiological Breakpoint of Static Dry End-Expiratory Breath-Holding in Naive Apneists: A Pilot Study. SENSORS (BASEL, SWITZERLAND) 2023; 23:7200. [PMID: 37631736 PMCID: PMC10459781 DOI: 10.3390/s23167200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 07/18/2023] [Accepted: 07/21/2023] [Indexed: 08/27/2023]
Abstract
The wavelet spectral characteristics of three respiratory muscle signals (scalenus (SC), parasternal intercostal (IC), and rectus abdominis (RA)) and one locomotor muscle (brachioradialis (BR)) were analyzed in the time-frequency (T-F) domain during voluntary breath-holding (BH), with a focus on the physiological breakpoint that is commonly considered the first involuntary breathing movement (IBM) that signals the end of the easy-going phase of BH. The study was performed for an end-expiratory BH physiological breaking point maneuver on twelve healthy, physically active, naive breath-holders/apneists (six professional athletes; six recreational athletes, and two individuals in the post-COVID-19 period) using surface electromyography (sEMG). We observed individual effects that were dependent on muscle oxygenation and each person's fitness, which were consistent with the mechanism of motor unit (MU) recruitment and the transition of slow-twitch oxidative (type 1) to fast-twitch glycolytic (type 2) muscle fibers. Professional athletes had longer BH durations (BHDs) and strong hypercapnic responses regarding the expiratory RA muscle, which is activated abruptly at higher BHDs in a person-specific range below 250 Hz and is dependent on the BHD. This is in contrast with recreational athletes, who had strong hypoxic responses regarding inspiratory IC muscle, which is activated faster and gradually in the frequency range of 250-450 Hz (independent of the person and BHD). This pilot study preliminarily indicates that it is possible to noninvasively assess the physiological characteristics of skeletal muscles, especially oxygenation, and improve physical fitness tests by determining the T-F features of elevated myoelectric IC and RA activity during BH.
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Affiliation(s)
- Nataša Ž. Mišić
- Division of Computational Bioengineering, Research & Development Institute Lola Ltd., 11030 Belgrade, Serbia; (M.O.); (S.C.)
| | - Mirko Ostojić
- Division of Computational Bioengineering, Research & Development Institute Lola Ltd., 11030 Belgrade, Serbia; (M.O.); (S.C.)
| | - Saša Cvetković
- Division of Computational Bioengineering, Research & Development Institute Lola Ltd., 11030 Belgrade, Serbia; (M.O.); (S.C.)
| | - Petar Miodragović
- Department of Physiology, Faculty of Medicine, University of Novi Sad, 21137 Novi Sad, Serbia;
| | - Zdravko Aničić
- Laboratory of Methodology and Research, Faculty of Sport and Physical Education, University of Belgrade, 11030 Belgrade, Serbia;
| | - Anita Kovačić Popović
- Department of Defectology and Clinical Psychology, Medika College for Vocational Studies in Healthcare, 11000 Belgrade, Serbia;
| | - Đorđe Stefanović
- Department for Basic Sports, Faculty of Sport and Physical Education, University of Belgrade, 11030 Belgrade, Serbia;
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Crowson MG, Gipson KS, Katz Kadosh O, Hartnick E, Grealish E, Keamy DG, Kinane TB, Hartnick CJ. Paediatric sleep apnea event prediction using nasal air pressure and machine learning. J Sleep Res 2023; 32:e13851. [PMID: 36807952 PMCID: PMC10363180 DOI: 10.1111/jsr.13851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 01/27/2023] [Accepted: 01/30/2023] [Indexed: 02/23/2023]
Abstract
Sleep-disordered breathing is an important health issue for children. The objective of this study was to develop a machine learning classifier model for the identification of sleep apnea events taken exclusively from nasal air pressure measurements acquired during overnight polysomnography for paediatric patients. A secondary objective of this study was to differentiate site of obstruction exclusively from hypopnea event data using the model. Computer vision classifiers were developed via transfer learning to either normal breathing while asleep, obstructive hypopnea, obstructive apnea or central apnea. A separate model was trained to identify site of obstruction as either adeno-tonsillar or tongue base. In addition, a survey of board-certified and board-eligible sleep physicians was completed to compare clinician versus model classification performance of sleep events, and indicated very good performance of our model relative to human raters. The nasal air pressure sample database available for modelling comprised 417 normal, 266 obstructive hypopnea, 122 obstructive apnea and 131 central apnea events derived from 28 paediatric patients. The four-way classifier achieved a mean prediction accuracy of 70.0% (95% confidence interval [67.1-72.9]). Clinician raters correctly identified sleep events from nasal air pressure tracings 53.8% of the time, whereas the local model was 77.5% accurate. The site of obstruction classifier achieved a mean prediction accuracy of 75.0% (95% confidence interval [68.7-81.3]). Machine learning applied to nasal air pressure tracings is feasible and may exceed the diagnostic performance of expert clinicians. Nasal air pressure tracings of obstructive hypopneas may "encode" information regarding the site of obstruction, which may only be discernable by machine learning.
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Affiliation(s)
- Matthew G. Crowson
- Department of Otolaryngology-Head & Neck Surgery, Mass Eye & Ear, Boston, Massachusetts
- Department of Otolaryngology-Head & Neck Surgery, Harvard Medical School, Boston, Massachusetts
| | - Kevin S. Gipson
- Department of Pediatric Pulmonary Medicine, MassGeneral Hospital for Children, Boston, Massachusetts
- Department of Pediatrics, Harvard Medical School, Boston, Massachusetts
- Division of Sleep Medicine, Harvard Medical School, Boston, Massachusetts
| | - Orna Katz Kadosh
- Department of Otolaryngology-Head & Neck Surgery, Mass Eye & Ear, Boston, Massachusetts
- Department of Otolaryngology-Head & Neck Surgery, Harvard Medical School, Boston, Massachusetts
| | | | | | - Donald G. Keamy
- Department of Otolaryngology-Head & Neck Surgery, Mass Eye & Ear, Boston, Massachusetts
- Department of Otolaryngology-Head & Neck Surgery, Harvard Medical School, Boston, Massachusetts
| | - Thomas Bernard Kinane
- Department of Pediatric Pulmonary Medicine, MassGeneral Hospital for Children, Boston, Massachusetts
- Department of Pediatrics, Harvard Medical School, Boston, Massachusetts
- Division of Sleep Medicine, Harvard Medical School, Boston, Massachusetts
| | - Christopher J. Hartnick
- Department of Otolaryngology-Head & Neck Surgery, Mass Eye & Ear, Boston, Massachusetts
- Department of Otolaryngology-Head & Neck Surgery, Harvard Medical School, Boston, Massachusetts
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Huang X, Shirahama K, Irshad MT, Nisar MA, Piet A, Grzegorzek M. Sleep Stage Classification in Children Using Self-Attention and Gaussian Noise Data Augmentation. SENSORS (BASEL, SWITZERLAND) 2023; 23:3446. [PMID: 37050506 PMCID: PMC10098613 DOI: 10.3390/s23073446] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 03/20/2023] [Accepted: 03/22/2023] [Indexed: 06/19/2023]
Abstract
The analysis of sleep stages for children plays an important role in early diagnosis and treatment. This paper introduces our sleep stage classification method addressing the following two challenges: the first is the data imbalance problem, i.e., the highly skewed class distribution with underrepresented minority classes. For this, a Gaussian Noise Data Augmentation (GNDA) algorithm was applied to polysomnography recordings to seek the balance of data sizes for different sleep stages. The second challenge is the difficulty in identifying a minority class of sleep stages, given their short sleep duration and similarities to other stages in terms of EEG characteristics. To overcome this, we developed a DeConvolution- and Self-Attention-based Model (DCSAM) which can inverse the feature map of a hidden layer to the input space to extract local features and extract the correlations between all possible pairs of features to distinguish sleep stages. The results on our dataset show that DCSAM based on GNDA obtains an accuracy of 90.26% and a macro F1-score of 86.51% which are higher than those of our previous method. We also tested DCSAM on a well-known public dataset-Sleep-EDFX-to prove whether it is applicable to sleep data from adults. It achieves a comparable performance to state-of-the-art methods, especially accuracies of 91.77%, 92.54%, 94.73%, and 95.30% for six-stage, five-stage, four-stage, and three-stage classification, respectively. These results imply that our DCSAM based on GNDA has a great potential to offer performance improvements in various medical domains by considering the data imbalance problems and correlations among features in time series data.
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Affiliation(s)
- Xinyu Huang
- Institute of Medical Informatics, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany
| | - Kimiaki Shirahama
- Department of Informatics, Kindai University, 3-4-1 Kowakae, Higashiosaka City 577-8502, Osaka, Japan
| | - Muhammad Tausif Irshad
- Institute of Medical Informatics, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany
- Department of IT, University of the Punjab, Lahore 54000, Pakistan
| | | | - Artur Piet
- Institute of Medical Informatics, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany
| | - Marcin Grzegorzek
- Institute of Medical Informatics, University of Lübeck, Ratzeburger Allee 160, 23562 Lübeck, Germany
- Department of Knowledge Engineering, University of Economics, Bogucicka 3, 40287 Katowice, Poland
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Martín-Montero A, Armañac-Julián P, Gil E, Kheirandish-Gozal L, Álvarez D, Lázaro J, Bailón R, Gozal D, Laguna P, Hornero R, Gutiérrez-Tobal GC. Pediatric sleep apnea: Characterization of apneic events and sleep stages using heart rate variability. Comput Biol Med 2023; 154:106549. [PMID: 36706566 DOI: 10.1016/j.compbiomed.2023.106549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Revised: 12/19/2022] [Accepted: 01/11/2023] [Indexed: 01/16/2023]
Abstract
Heart rate variability (HRV) is modulated by sleep stages and apneic events. Previous studies in children compared classical HRV parameters during sleep stages between obstructive sleep apnea (OSA) and controls. However, HRV-based characterization incorporating both sleep stages and apneic events has not been conducted. Furthermore, recently proposed novel HRV OSA-specific parameters have not been evaluated. Therefore, the aim of this study was to characterize and compare classic and pediatric OSA-specific HRV parameters while including both sleep stages and apneic events. A total of 1610 electrocardiograms from the Childhood Adenotonsillectomy Trial (CHAT) database were split into 10-min segments to extract HRV parameters. Segments were characterized and grouped by sleep stage (wake, W; non-rapid eye movement, NREMS; and REMS) and presence of apneic events (under 1 apneic event per segment, e/s; 1-5 e/s; 5-10 e/s; and over 10 e/s). NREMS showed significant changes in HRV parameters as apneic event frequency increased, which were less marked in REMS. In both NREMS and REMS, power in BW2, a pediatric OSA-specific frequency domain, allowed for the optimal differentiation among segments. Moreover, in the absence of apneic events, another defined band, BWRes, resulted in best differentiation between sleep stages. The clinical usefulness of segment-based HRV characterization was then confirmed by two ensemble-learning models aimed at estimating apnea-hypopnea index and classifying sleep stages, respectively. We surmise that basal sympathetic activity during REMS may mask apneic events-induced sympathetic excitation, thus highlighting the importance of incorporating sleep stages as well as apneic events when evaluating HRV in pediatric OSA.
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Affiliation(s)
- Adrián Martín-Montero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain.
| | - Pablo Armañac-Julián
- CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain; Biomedical Signal Interpretation and Computational Simulation (BSICoS) Group, Institute of Engineering Research (I3A), IIS Aragón, University of Zaragoza, Zaragoza, Spain
| | - Eduardo Gil
- CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain; Biomedical Signal Interpretation and Computational Simulation (BSICoS) Group, Institute of Engineering Research (I3A), IIS Aragón, University of Zaragoza, Zaragoza, Spain
| | - Leila Kheirandish-Gozal
- Department of Child Health, The University of Missouri School of Medicine, Columbia, MO, USA
| | - Daniel Álvarez
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Jesús Lázaro
- CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain; Biomedical Signal Interpretation and Computational Simulation (BSICoS) Group, Institute of Engineering Research (I3A), IIS Aragón, University of Zaragoza, Zaragoza, Spain
| | - Raquel Bailón
- CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain; Biomedical Signal Interpretation and Computational Simulation (BSICoS) Group, Institute of Engineering Research (I3A), IIS Aragón, University of Zaragoza, Zaragoza, Spain
| | - David Gozal
- Department of Child Health, The University of Missouri School of Medicine, Columbia, MO, USA
| | - Pablo Laguna
- CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain; Biomedical Signal Interpretation and Computational Simulation (BSICoS) Group, Institute of Engineering Research (I3A), IIS Aragón, University of Zaragoza, Zaragoza, Spain
| | - Roberto Hornero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Gonzalo C Gutiérrez-Tobal
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain; CIBER de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
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7
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Jiménez-García J, García M, Gutiérrez-Tobal GC, Kheirandish-Gozal L, Vaquerizo-Villar F, Álvarez D, del Campo F, Gozal D, Hornero R. A 2D convolutional neural network to detect sleep apnea in children using airflow and oximetry. Comput Biol Med 2022; 147:105784. [DOI: 10.1016/j.compbiomed.2022.105784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Revised: 04/19/2022] [Accepted: 06/26/2022] [Indexed: 11/03/2022]
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Hei Y, Yuan T, Fan Z, Yang B, Hu J. Sleep staging classification based on a new parallel fusion method of multiple sources signals. Physiol Meas 2022; 43. [PMID: 35381584 DOI: 10.1088/1361-6579/ac647b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Accepted: 04/05/2022] [Indexed: 11/12/2022]
Abstract
APPROACH First, the heart rate variability (HRV) is extracted from EOG with the Weight Calculation Algorithm (WCA) and an "HYF" RR interval detection algorithm. Second, three feature sets were extracted from HRV segments and EOG segments: time-domain features, frequency domain features and nonlinear-domain features. The frequency domain features and nonlinear-domain features were extracted by using Discrete Wavelet Transform (DWT), Autoregressive (AR), and Power Spectral entropy (PSE), and Refined Composite Multiscale Dispersion Entropy (RCMDE). Third, a new "Parallel Fusion Method" (PFM) for sleep stage classification is proposed. Three kinds of feature sets from EOG and HRV segments are fused by using PFM. Fourth, Extreme Gradient Boosting (XGBoost) and Support Vector Machine (SVM) classification models is employed for sleep staging. MAIN RESULTS Our experimental results show significant performance improvement on automatic sleep staging on the target domains achieved with the new sleep staging approach. The performance of the proposed method is testedby evaluating the average accuracy, Kappa coefficient. The average accuracy of sleep classification results by using XGBoost classification model with PFM is 82.7% and the kappa coefficient is 0.711, also by using SVM classification model with the PFM is 83.7%, and the kappa coefficient is 0.724. Experimental results show that the performance of the proposed method is competitive with the most current methods and results, and the recognition rate of S1 stage is significantly improved. Significance: As a consequence, it would enable one to improve the quality of automatic sleep staging models when the EOG and HRV signals are fused, which can be beneficial for monitor sleep quality and keep abreast of health conditions. Besides, our study provides good research ideas and methods for scholars, doctors and individuals.
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Affiliation(s)
- Yafang Hei
- College of Applied Mathematics, Chengdu University of Information Technology, Xuefu road 24, Shuangliu, Chengdu, Chengdu, Sichuan, 610225, CHINA
| | - Tuming Yuan
- College of Applied Mathematics, Chengdu University of Information Technology, Xuefu road 24, Chengdu, Sichuan, 610225, CHINA
| | - Zhigao Fan
- School of Atmospheric Sciences, Chengdu University of Information Technology, Xuefu road 24, Chengdu, Sichuan, 610225, CHINA
| | - Bo Yang
- College of Electronic Engineering, Chengdu University of Information Technology, Xuefu road 24, , , 610225, CHINA
| | - Jiancheng Hu
- College of Applied Mathematics, Chengdu University of Information Technology, Xuefu road 24, , , 610225, CHINA
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9
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Automated detection of obstructive sleep apnea in more than 8000 subjects using frequency optimized orthogonal wavelet filter bank with respiratory and oximetry signals. Comput Biol Med 2022; 144:105364. [PMID: 35299046 DOI: 10.1016/j.compbiomed.2022.105364] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Revised: 02/27/2022] [Accepted: 02/27/2022] [Indexed: 12/12/2022]
Abstract
Obstructive sleep apnea (OSA) is a common respiratory disorder marked by interruption of the respiratory tract and difficulty in breathing. The risk of serious health damage can be reduced if OSA is diagnosed and treated at an early stage. OSA is primarily diagnosed using polysomnography (PSG) monitoring performed for overnight sleep; furthermore, capturing PSG signals during the night is expensive, time-consuming, complex and highly inconvenient to patients. Hence, we are proposing to detect OSA automatically using respiratory and oximetry signals. The aim of this study is to develop a simple and computationally efficient wavelet-based automated system based on these signals to detect OSA in elderly subjects. In this study, we proposed an accurate, reliable, and less complex OSA automated detection system by using pulse oximetry (SpO2) and respiratory signals including thoracic (ThorRes) movement, abdominal (AbdoRes) movement, and airflow (AF). These signals are collected from the Sleep Heart Health Study (SHHS) database from the National Sleep Research Resource (NSRR), which is one of the largest repositories of publicly available sleep databases. The database comprises of two groups SHHS-1 and SHHS-2, which involves 5,793 and 2,651 subjects, respectively with an average age of ≥60 years. The 30-s epochs of the signals are decomposed into sub-bands using frequency optimized orthogonal wavelet filter bank. Tsallis entropies are extracted from the sub-band coefficients of wavelet filter bank. A total 4,415,229 epochs of respiratory and oximetry signals are used to develop the model. The proposed model is developed using GentleBoost and Random under-sampling Boosting (RUSBoosted Tree) algorithms with 10-fold cross-validation technique. Our developed model has obtained the highest classification accuracy of 89.39% and 84.64% for the imbalanced and balanced datasets, respectively using 10-fold cross-validation technique. Using the 20% hold-out validation, the model yielded an accuracy of 88.26% and 84.31% for the imbalanced and balanced datasets, respectively. Hence, the respiratory and SpO2 signals-based model can be used for automated OSA detection. The results obtained from the proposed model are better than the state-of-the-art models and can be used in-home for screening the OSA.
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10
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Gutiérrez-Tobal GC, Álvarez D, Vaquerizo-Villar F, Barroso-García V, Gómez-Pilar J, Del Campo F, Hornero R. Conventional Machine Learning Methods Applied to the Automatic Diagnosis of Sleep Apnea. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022; 1384:131-146. [PMID: 36217082 DOI: 10.1007/978-3-031-06413-5_8] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
The overnight polysomnography shows a range of drawbacks to diagnose obstructive sleep apnea (OSA) that have led to the search for artificial intelligence-based alternatives. Many classic machine learning methods have been already evaluated for this purpose. In this chapter, we show the main approaches found in the scientific literature along with the most used data to develop the models, useful and large easily available databases, and suitable methods to assess performances. In addition, a range of results from selected studies are presented as examples of these methods. Very high diagnostic performances are reported in these results regardless of the approaches taken. This leads us to conclude that conventional machine learning methods are useful techniques to develop new OSA diagnosis simplification proposals and to act as benchmark for other more recent methods such as deep learning.
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Affiliation(s)
- Gonzalo C Gutiérrez-Tobal
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain.
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain.
| | - Daniel Álvarez
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
| | - Fernando Vaquerizo-Villar
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
| | - Verónica Barroso-García
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
| | - Javier Gómez-Pilar
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
| | - Félix Del Campo
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
- Sleep Unit, Pneumology Service, Hospital Universitario Rio Hortega, Valladolid, Spain
| | - Roberto Hornero
- Centro de Investigación Biomédica en Red, Bioingeniería, Biomateriales, Nanomedicina, Madrid, Spain
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
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Álvarez D, Gutiérrez-Tobal GC, Vaquerizo-Villar F, Moreno F, Del Campo F, Hornero R. Oximetry Indices in the Management of Sleep Apnea: From Overnight Minimum Saturation to the Novel Hypoxemia Measures. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022; 1384:219-239. [PMID: 36217087 DOI: 10.1007/978-3-031-06413-5_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Obstructive sleep apnea (OSA) is a multidimensional disease often underdiagnosed due to the complexity and unavailability of its standard diagnostic method: the polysomnography. Among the alternative abbreviated tests searching for a compromise between simplicity and accurateness, oximetry is probably the most popular. The blood oxygen saturation (SpO2) signal is characterized by a near-constant profile in healthy subjects breathing normally, while marked drops (desaturations) are linked to respiratory events. Parameterization of the desaturations has led to a great number of indices of severity assessment commonly used to assist in OSA diagnosis. In this chapter, the main methodologies used to characterize the overnight oximetry profile are reviewed, from visual inspection and simple statistics to complex measures involving signal processing and pattern recognition techniques. We focus on the individual performance of each approach, but also on the complementarity among the great amount of indices existing in the state of the art, looking for the most relevant oximetric feature subset. Finally, a quick overview of SpO2-based deep learning applications for OSA management is carried out, where the raw oximetry signal is analyzed without previous parameterization. Our research allows us to conclude that all the methodologies (conventional, time, frequency, nonlinear, and hypoxemia-based) demonstrate high ability to provide relevant oximetric indices, but only a reduced set provide non-redundant complementary information leading to a significant performance increase. Finally, although oximetry is a robust tool, greater standardization and prospective validation of the measures derived from complex signal processing techniques are still needed to homogenize interpretation and increase generalizability.
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Affiliation(s)
- Daniel Álvarez
- Biomedical Engineering Group (GIB), University of Valladolid, Valladolid, Spain.
- Pneumology Department, Río Hortega University Hospital, Valladolid, Spain.
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain.
| | - Gonzalo C Gutiérrez-Tobal
- Biomedical Engineering Group (GIB), University of Valladolid, Valladolid, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Fernando Vaquerizo-Villar
- Biomedical Engineering Group (GIB), University of Valladolid, Valladolid, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Fernando Moreno
- Pneumology Department, Río Hortega University Hospital, Valladolid, Spain
| | - Félix Del Campo
- Biomedical Engineering Group (GIB), University of Valladolid, Valladolid, Spain
- Pneumology Department, Río Hortega University Hospital, Valladolid, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
| | - Roberto Hornero
- Biomedical Engineering Group (GIB), University of Valladolid, Valladolid, Spain
- Centro de Investigación Biomédica en Red de Bioingeniería, Biomateriales y Nanomedicina, Instituto de Salud Carlos III, Valladolid, Spain
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Barroso-García V, Jiménez-García J, Gutiérrez-Tobal GC, Hornero R. Airflow Analysis in the Context of Sleep Apnea. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022; 1384:241-253. [PMID: 36217088 DOI: 10.1007/978-3-031-06413-5_14] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The airflow (AF) is a physiological signal involved in the overnight polysomnography (PSG) that reflects the respiratory activity. This signal is able to show the particularities of sleep apnea and is therefore used to define apneic events. In this regard, a growing number of studies have shown the usefulness of employing the overnight airflow as the only or combined information source for diagnosing sleep apnea in both children and adults. Due to its easy acquisition and interpretation, this biosignal has been widely analyzed by means of different signal processing techniques. In this chapter, we review the main methodological approaches applied to characterize and extract relevant information from this signal. In view of the results, we can conclude that the overnight airflow successfully reflects the particularities caused by the occurrence of apneic and hypopneic events and provides useful information for obtaining relevant biomarkers that characterize this disease.
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Affiliation(s)
- Verónica Barroso-García
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain.
- Centro de Investigación Biomédica en Red en Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Valladolid, Spain.
| | | | - Gonzalo C Gutiérrez-Tobal
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
- Centro de Investigación Biomédica en Red en Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Valladolid, Spain
| | - Roberto Hornero
- Biomedical Engineering Group, University of Valladolid, Valladolid, Spain
- Centro de Investigación Biomédica en Red en Bioingeniería, Biomateriales y Nanomedicina (CIBER-BBN), Valladolid, Spain
- Mathematics Research Institute of the University of Valladolid (IMUVa), Valladolid, Spain
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Sharma M, Bapodara S, Tiwari J, Acharya UR. Automated sleep apnea detection in pregnant women using wavelet-based features. INFORMATICS IN MEDICINE UNLOCKED 2022. [DOI: 10.1016/j.imu.2022.101026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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14
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Gozal D. Diagnostic approaches to respiratory abnormalities in craniofacial syndromes. Semin Fetal Neonatal Med 2021; 26:101292. [PMID: 34556443 DOI: 10.1016/j.siny.2021.101292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Craniofacial syndromes are a complex cluster of genetic conditions characterized by embryonic perturbations in the developmental trajectory of the upper airway and related structures. The presence of reduced airway size and maladaptive neuromuscular responses, particularly during sleep, leads to significant alterations in sleep architecture and overall detrimental gas exchange abnormalities that can be life-threatening. The common need for multi-stage therapeutic interventions for these craniofacial problems requires careful titration of anatomy and function, and the latter is currently evaluated by overnight polysomnography in sleep laboratories. The cost, inconvenience, and scarcity of pediatric sleep laboratories preclude the frequent evaluations that could optimize the overall process of treatment and corresponding outcomes. Here, we critically examine reductionist approaches to polysomnography in children to establish the parallel approximation of such techniques to infant with craniofacial disorders. The need for prospective longitudinal multicenter studies with side-by-side comparisons aimed at identifying an optimal diagnostic and long-term monitoring paradigm for these potentially life-threatening conditions is emphasized.
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Affiliation(s)
- David Gozal
- Department of Child Health, University of Missouri, Columbia, MO, USA.
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