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1
Yan L, Liang Z, Zhang H, Zhang G, Zheng W, Han C, Yu D, Zhang H, Xie X, Liu C, Zhang W, Zheng H, Pei J, Shen D, Qian X. A domain knowledge-based interpretable deep learning system for improving clinical breast ultrasound diagnosis. Commun Med (Lond) 2024;4:90. [PMID: 38760506 PMCID: PMC11101659 DOI: 10.1038/s43856-024-00518-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Accepted: 05/03/2024] [Indexed: 05/19/2024]  Open
2
Zhang J, Guo Y, Zhou L, Wang L, Wu W, Shen D. Constructing hierarchical attentive functional brain networks for early AD diagnosis. Med Image Anal 2024;94:103137. [PMID: 38507893 DOI: 10.1016/j.media.2024.103137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 01/29/2024] [Accepted: 03/05/2024] [Indexed: 03/22/2024]
3
Chen Q, Zhang J, Meng R, Zhou L, Li Z, Feng Q, Shen D. Modality-Specific Information Disentanglement From Multi-Parametric MRI for Breast Tumor Segmentation and Computer-Aided Diagnosis. IEEE Trans Med Imaging 2024;43:1958-1971. [PMID: 38206779 DOI: 10.1109/tmi.2024.3352648] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/13/2024]
4
Zhang J, Mao H, Chang D, Yu H, Wu W, Shen D. Adaptive and Iterative Learning with Multi-perspective Regularizations for Metal Artifact Reduction. IEEE Trans Med Imaging 2024;PP:1-1. [PMID: 38687653 DOI: 10.1109/tmi.2024.3395348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
5
Teng L, He Y, Cao Z, Hua R, Han Y, Feng Q, Shi F, Shen D. Unified Model for Children's Brain Image Segmentation with Co-Registration Framework Guided by Longitudinal MRI. IEEE J Biomed Health Inform 2024;PP:1-10. [PMID: 38669174 DOI: 10.1109/jbhi.2024.3393974] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/28/2024]
6
Wang W, Deng J, Yin C, Wang F, Zhang C, Yu C, Gong S, Zhan X, Chen S, Shen D. Study of association between corneal shape parameters and axial length elongation during orthokeratology using image-pro plus software. BMC Ophthalmol 2024;24:163. [PMID: 38609888 PMCID: PMC11010382 DOI: 10.1186/s12886-024-03398-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Accepted: 03/14/2024] [Indexed: 04/14/2024]  Open
7
Huang S, Zhang X, Cui Z, Zhang H, Chen G, Shen D. Tissue Segmentation of Thick-Slice Fetal Brain MR Scans With Guidance From High-Quality Isotropic Volumes. IEEE Trans Biomed Eng 2024;71:1404-1415. [PMID: 38048237 DOI: 10.1109/tbme.2023.3337338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/06/2023]
8
Hu J, Cui Z, Zhang X, Zhang J, Ge Y, Zhang H, Lu Y, Shen D. Uncertainty-aware refinement framework for ovarian tumor segmentation in CECT volume. Med Phys 2024;51:2678-2694. [PMID: 37862556 DOI: 10.1002/mp.16795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 09/05/2023] [Accepted: 09/26/2023] [Indexed: 10/22/2023]  Open
9
Chen J, Lu R, Jing B, Zhang H, Chen G, Shen D. One model, two brains: Automatic fetal brain extraction from MR images of twins. Comput Med Imaging Graph 2024;112:102330. [PMID: 38262133 DOI: 10.1016/j.compmedimag.2024.102330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Revised: 11/27/2023] [Accepted: 12/13/2023] [Indexed: 01/25/2024]
10
Gu Y, Pan Y, Fang Z, Ma L, Zhu Y, Androjna C, Zhong K, Yu X, Shen D. Deep learning-assisted preclinical MR fingerprinting for sub-millimeter T1 and T2 mapping of entire macaque brain. Magn Reson Med 2024;91:1149-1164. [PMID: 37929695 DOI: 10.1002/mrm.29905] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 09/10/2023] [Accepted: 10/10/2023] [Indexed: 11/07/2023]
11
Liu Z, Zhang L, Wu Z, Yu X, Cao C, Dai H, Liu N, Liu J, Liu W, Li Q, Shen D, Li X, Zhu D, Liu T. Surviving ChatGPT in healthcare. Front Radiol 2024;3:1224682. [PMID: 38464946 PMCID: PMC10920216 DOI: 10.3389/fradi.2023.1224682] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 07/25/2023] [Indexed: 03/12/2024]
12
Meng X, Sun K, Xu J, He X, Shen D. Multi-modal Modality-masked Diffusion Network for Brain MRI Synthesis with Random Modality Missing. IEEE Trans Med Imaging 2024;PP:1-1. [PMID: 38393846 DOI: 10.1109/tmi.2024.3368664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/25/2024]
13
Liu H, Ni Z, Nie D, Shen D, Wang J, Tang Z. Multimodal Brain Tumor Segmentation Boosted by Monomodal Normal Brain Images. IEEE Trans Image Process 2024;33:1199-1210. [PMID: 38315584 DOI: 10.1109/tip.2024.3359815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2024]
14
Li Z, Zheng Y, Shan D, Yang S, Li Q, Wang B, Zhang Y, Hong Q, Shen D. ScribFormer: Transformer Makes CNN Work Better for Scribble-based Medical Image Segmentation. IEEE Trans Med Imaging 2024;PP:1-1. [PMID: 38324425 DOI: 10.1109/tmi.2024.3363190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/09/2024]
15
Teng L, Wang B, Xu X, Zhang J, Mei L, Feng Q, Shen D. Beam-wise dose composition learning for head and neck cancer dose prediction in radiotherapy. Med Image Anal 2024;92:103045. [PMID: 38071865 DOI: 10.1016/j.media.2023.103045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 10/12/2023] [Accepted: 11/27/2023] [Indexed: 01/12/2024]
16
Zhang X, Sun K, Wu D, Xiong X, Liu J, Yao L, Li S, Wang Y, Feng J, Shen D. An Anatomy- and Topology-Preserving Framework for Coronary Artery Segmentation. IEEE Trans Med Imaging 2024;43:723-733. [PMID: 37756173 DOI: 10.1109/tmi.2023.3319720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
17
Tan M, Cui Z, Zhong T, Fang Y, Zhang Y, Shen D. A progressive framework for tooth and substructure segmentation from cone-beam CT images. Comput Biol Med 2024;169:107839. [PMID: 38150887 DOI: 10.1016/j.compbiomed.2023.107839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Revised: 11/13/2023] [Accepted: 12/07/2023] [Indexed: 12/29/2023]
18
Chen J, Lu R, Ye S, Guang M, Tassew TM, Jing B, Zhang G, Chen G, Shen D. Image Recovery Matters: A Recovery-Extraction Framework for Robust Fetal Brain Extraction From MR Images. IEEE J Biomed Health Inform 2024;28:823-834. [PMID: 37995170 DOI: 10.1109/jbhi.2023.3333953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2023]
19
Dai L, Sheng B, Chen T, Wu Q, Liu R, Cai C, Wu L, Yang D, Hamzah H, Liu Y, Wang X, Guan Z, Yu S, Li T, Tang Z, Ran A, Che H, Chen H, Zheng Y, Shu J, Huang S, Wu C, Lin S, Liu D, Li J, Wang Z, Meng Z, Shen J, Hou X, Deng C, Ruan L, Lu F, Chee M, Quek TC, Srinivasan R, Raman R, Sun X, Wang YX, Wu J, Jin H, Dai R, Shen D, Yang X, Guo M, Zhang C, Cheung CY, Tan GSW, Tham YC, Cheng CY, Li H, Wong TY, Jia W. A deep learning system for predicting time to progression of diabetic retinopathy. Nat Med 2024;30:584-594. [PMID: 38177850 PMCID: PMC10878973 DOI: 10.1038/s41591-023-02702-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 11/10/2023] [Indexed: 01/06/2024]