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Yamaguchi S, Ebe H, Minegishi T, Sugiyama M. Introduction of a Conductive Layer into Flood-Resistant Gas Diffusion Electrodes with Polymer Substrate for an Efficient Electrochemical CO 2 Reduction with Copper Oxide. ACS Appl Mater Interfaces 2024; 16:17371-17376. [PMID: 38533998 DOI: 10.1021/acsami.3c14568] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/28/2024]
Abstract
Conversion of atmospheric carbon dioxide (CO2) into valuable feedstocks is a crucial technology, and electrochemical reduction of CO2 is a promising approach that can provide a useful source of ethylene (C2H4). Gas diffusion electrodes (GDEs) placed at the interface of the CO2 gas and electrolyte can achieve high current density through a sufficient supply of dissolved CO2 to the reaction site, making them indispensable in industrial applications. However, conventional GDEs with carbon substrate have suffered from electrolyte flooding and consequent loss of efficiency, posing an obstacle for practical application. While flood-resistant GDEs with hydrophobic polymer substrate have been proposed recently, only conductive materials can be employed as electrocatalysts because of their insulative properties, despite the high activities of oxide materials such as copper oxide. Here, we introduce an aluminum conductive layer in GDE with polymer substrate to enable the use of electrically resistive catalysts. Cuprous oxide (Cu2O) with silver particles was tested as a model material and has shown prolonged stability (>17 h) with high C2H4 Faraday efficiency (>50%) while suppressing flooding. A thorough characterization revealed that the conductive layer makes Cu2O an efficient electrocatalyst, even on the polymer substrate, by providing sufficient electrons through its conduction path. This research significantly expands the scope of electrode design by enabling the incorporation of a wide range of nonelectrically conductive materials on GDEs with polymer substrate.
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Affiliation(s)
- Shingi Yamaguchi
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1Komaba, Meguro-ku, Tokyo 153-8904, Japan
| | - Hiroji Ebe
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1Komaba, Meguro-ku, Tokyo 153-8904, Japan
| | - Tsutomu Minegishi
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1Komaba, Meguro-ku, Tokyo 153-8904, Japan
| | - Masakazu Sugiyama
- Research Center for Advanced Science and Technology, The University of Tokyo, 4-6-1Komaba, Meguro-ku, Tokyo 153-8904, Japan
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Horiguchi G, Oyama R, Akabane T, Suzuki N, Katoh E, Mizokami Y, Noguchi K, Hirotsu N. Cooperation of an external carbonic anhydrase and HCO3- transporter supports underwater photosynthesis in submerged leaves of the amphibious plant Hygrophila difformis. Ann Bot 2024; 133:287-304. [PMID: 37832038 PMCID: PMC11005787 DOI: 10.1093/aob/mcad161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 10/12/2023] [Indexed: 10/15/2023]
Abstract
BACKGROUND AND AIMS HCO3- can be a major carbon resource for photosynthesis in underwater environments. Here we investigate the underlying mechanism of uptake and membrane transport of HCO3- in submerged leaves of Hygrophila difformis, a heterophyllous amphibious plant. To characterize these mechanisms, we evaluated the sensitivity of underwater photosynthesis to an external carbonic anhydrase (CA) inhibitor and an anion exchanger protein inhibitor, and we attempted to identify components of the mechanism of HCO3- utilization. METHODS We evaluated the effects of the external CA inhibitor and anion exchanger protein inhibitor on the NaHCO3 response of photosynthetic O2 evolution in submerged leaves of H. difformis. Furthermore, we performed a comparative transcriptomic analysis between terrestrial and submerged leaves. KEY RESULTS Photosynthesis in the submerged leaves was decreased by both the external CA inhibitor and anion exchanger protein inhibitor, but no additive effect was observed. Among upregulated genes in submerged leaves, two α-CAs, Hdα-CA1 and Hdα-CA2, and one β-carbonic anhydrase, Hdβ-CA1, were detected. Based on their putative amino acid sequences, the α-CAs are predicted to be localized in the apoplastic region. Recombinant Hdα-CA1 and Hdβ-CA1 showed dominant CO2 hydration activity over HCO3- dehydration activity. CONCLUSIONS We propose that the use of HCO3- for photosynthesis in submerged leaves of H. difformis is driven by the cooperation between an external CA, Hdα-CA1, and an unidentified HCO3- transporter.
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Affiliation(s)
- Genki Horiguchi
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
- Japan Society for the Promotion of Science, Chiyoda, Tokyo, Japan
| | - Ryoma Oyama
- Faculty of Life Sciences, Toyo University, Itakura, Gunma, Japan
| | - Tatsuki Akabane
- Graduate School of Life Sciences, Toyo University, Itakura, Gunma, Japan
| | - Nobuhiro Suzuki
- Research Center for Advanced Analysis, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
| | - Etsuko Katoh
- Faculty of Food and Nutritional Sciences Life Sciences, Toyo University, Itakura, Gunma, Japan
| | - Yusuke Mizokami
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| | - Ko Noguchi
- School of Life Sciences, Tokyo University of Pharmacy and Life Sciences, Hachioji, Tokyo, Japan
| | - Naoki Hirotsu
- Faculty of Life Sciences, Toyo University, Itakura, Gunma, Japan
- Graduate School of Life Sciences, Toyo University, Itakura, Gunma, Japan
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Emanuel K. Cyclone Jasper's rains in the context of climate change. Proc Natl Acad Sci U S A 2024; 121:e2400292121. [PMID: 38557181 PMCID: PMC11009628 DOI: 10.1073/pnas.2400292121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2024] [Accepted: 02/02/2024] [Indexed: 04/04/2024] Open
Abstract
Cyclone Jasper struck northern Queensland in mid-December, 2023, causing extensive flooding stemming from torrential rain. Many stations reported rainfall totals exceeding 1 m, and a few surpassed 2 m, possibly making Jasper the wettest tropical cyclone in Australian history. To be better prepared for events like Jasper, it is useful to estimate the probability of rainfall events of Jasper's magnitude and how that probability is likely to evolve as climate warms. To make such estimates, we apply an advanced tropical cyclone downscaling technique to nine global climate models, generating a total of 27,000 synthetic tropical cyclones each for the climate of the recent past and that of the end of this century. We estimate that the annual probability of 1 m of rain from tropical cyclones at Cairns increases from about 0.8% at the end of the 20th century to about 2.3% at the end of the 21st, a factor of almost three. Interpolating frequency to the year 2023 suggests that the current annual probability of Jasper's rainfall is about 1.2%, about a 50% increase over that of the year 2000. Further analysis suggests that the primary causes of increasing rainfall are stronger cyclones and a moister atmosphere.
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Affiliation(s)
- Kerry Emanuel
- Lorenz Center, Massachusetts Institute of Technology, Cambridge, MA 02139
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Rondeau S, Raine NE. Unveiling the submerged secrets: bumblebee queens' resilience to flooding. Biol Lett 2024; 20:20230609. [PMID: 38626803 PMCID: PMC11022157 DOI: 10.1098/rsbl.2023.0609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 02/07/2024] [Accepted: 03/11/2024] [Indexed: 04/19/2024] Open
Abstract
In a previous study, an experimental oversight led to the accumulation of water filling a container housing diapausing bumblebee queens. Surprisingly, after draining the water, queens were found to be alive. This observation raises a compelling question: can bumblebee queens endure periods of inundation while overwintering underground? To address this question, we conducted an experiment using 143 common eastern bumblebee (Bombus impatiens) queens placed in soil-filled tubes and subjected to artificially induced diapause in a refrigerated unit for 7 days. Tap water was then added to the tubes and queens (n = 21 per treatment) were either maintained underwater using a plunger-like apparatus or left to float naturally on the water's surface for varying durations (8 h, 24 h or 7 days) while remaining in overwintering conditions. Seventeen queens served as controls. After the submersion period, queens were removed from water, transferred to new tubes with soil and kept in cold storage for eight weeks. Overall, queen survival remained consistently high (89.5 ± 6.4%) across all treatments and did not differ among submersion regimes and durations. These results demonstrate the remarkable ability of diapausing B. impatiens queens to withstand submersion under water for up to one week, indicating their adaptations to survive periods of flooding in the wild.
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Affiliation(s)
- Sabrina Rondeau
- School of Environmental Sciences, University of Guelph, Guelph, Ontario, Canada
- Department of Biology, University of Ottawa, Ottawa, Ontario, Canada
| | - Nigel E. Raine
- School of Environmental Sciences, University of Guelph, Guelph, Ontario, Canada
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Shiono K, Matsuura H. Exogenous abscisic acid induces the formation of a suberized barrier to radial oxygen loss in adventitious roots of barley (Hordeum vulgare). Ann Bot 2024:mcae010. [PMID: 38448365 DOI: 10.1093/aob/mcae010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 01/18/2024] [Indexed: 03/08/2024]
Abstract
BACKGROUND AND AIMS Internal root aeration is essential for root growth in waterlogged conditions. Aerenchyma provides a path for oxygen to diffuse to the roots. In most wetland species, including rice, a barrier to radial oxygen loss (ROL) allows more of the oxygen to diffuse to the root tip, enabling root growth into anoxic soil. Most dryland crops, including barley, do not form a root ROL barrier. We previously found that abscisic acid (ABA) signalling is involved in the induction of ROL barrier formation in rice during waterlogging. Although rice typically does not form a tight ROL barrier in roots in aerated conditions, an ROL barrier with suberized exodermis was induced by application of exogenous ABA. Therefore, we hypothesized that ABA application could also trigger root ROL barrier formation with hypodermal suberization in barley. METHODS Formation of an ROL barrier was examined in roots in different exogenous ABA concentrations and at different time points using cylindrical electrodes and Methylene Blue staining. Additionally, we evaluated root porosity and observed suberin and lignin modification. Suberin, lignin and Casparian strips in the cell walls were observed by histochemical staining. We also evaluated the permeability of the apoplast to a tracer. KEY RESULTS Application of ABA induced suberization and ROL barrier formation in the adventitious roots of barley. The hypodermis also formed lignin-containing Casparian strips and a barrier to the infiltration of an apoplastic tracer (periodic acid). However, ABA application did not affect root porosity. CONCLUSIONS Our results show that in artificial conditions, barley can induce the formation of ROL and apoplastic barriers in the outer part of roots if ABA is applied exogenously. The difference in ROL barrier inducibility between barley (an upland species) and rice (a wetland species) might be attributable to differences in ABA signalling in roots in response to waterlogging conditions.
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Affiliation(s)
- Katsuhiro Shiono
- Department of Bioscience and Biotechnology, Fukui Prefectural University, 4-1-1 Matsuoka-Kenjojima, Eiheiji, Fukui 910-1195, Japan
| | - Haruka Matsuura
- Department of Bioscience and Biotechnology, Fukui Prefectural University, 4-1-1 Matsuoka-Kenjojima, Eiheiji, Fukui 910-1195, Japan
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Asare G, Tuffour M. Urban flooding: Coping with Weija Dam spillage by downstream communities in Ghana. Jamba 2024; 16:1476. [PMID: 38628566 PMCID: PMC11019054 DOI: 10.4102/jamba.v16i1.1476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 12/12/2023] [Indexed: 04/19/2024]
Abstract
This study adds to knowledge by specifically focusing on the dam spillage-induced floods within a fast-urbanising city with weak law enforcement in a developing country. Employing a sequential mixed-method approach, we first selected and analysed data from 120 respondents through a survey and complemented it with key informants residing in the communities affected by flooding. The findings revealed that dramatic ramifications of dam spillage-induced floods disrupt the livelihoods of many individuals in the form of disruption to income-generating activities and substantial property loss. Notwithstanding the devastating effect of the dam spillage, residents lack advance and adequate preparedness. In coping with such challenges, most flood victims rely on support from nongovernmental sources. The challenge of flooding from the dam spillage is multifaceted and deeply rooted in complex factors which includes growing urbanisation, poor urban planning and weak law enforcement. Residents' adaptive strategies remain limited, demonstrating a dearth of resilience against such shocks. Contribution In light of these challenges, the authors advocate a close collaborative working partnerships among stakeholders to provide flood risk management interventions, strategic planned dam spillage that minimises the effect of dam spillage-induced floods on the local communities, early warning systems and planning and enforcement of building regulations.
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Affiliation(s)
- Gloria Asare
- Faculty of Development Studies, Presbyterian University, Akropong, Ghana
| | - Michael Tuffour
- School of Sustainable Development, University of Environment and Sustainable Development, Somanya, Ghana
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Becker FK, Boyes RS, Wittmer HU, Inman V, Marsland S. Landscape-wide pulse events predict trait-based responses among wetland birds in perennial channels of a dryland wetland. Ecol Appl 2024; 34:e2931. [PMID: 37950629 DOI: 10.1002/eap.2931] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Revised: 08/21/2023] [Accepted: 09/15/2023] [Indexed: 11/13/2023]
Abstract
Wetlands in arid or semiarid zones are vital for maintaining biodiversity but face growing threats. Flooding regime variability is a key driver of ecological dynamism in these systems, dictating primary productivity on a large spatial scale. The functional composition or diversity of wetland-dependent bird species has been found to be sensitive to fluctuations in hydrological regimes and can thus be indicative of cascading ecosystem responses associated with climate change. In this paper, we investigate whether large-scale changes in inundation and fire-a significant additional biodiversity determinant in (semi-)arid landscapes-are reliable predictors of functional group responses of wetland-dependent birds along a perennial channel of the Okavango Delta, Botswana. We fit generalized additive models (GAMs) to 6 years of bird survey data collected along ~190-km-long annual transects and use remotely sensed landscape-level inundation estimates, as well as spatiotemporal distance to fire, to predict the responsiveness of seven trait-based functional group abundances. During the surveys, a total of 89 different wetland-dependent bird species were recorded, including 76 residents, across all years, with below-surface feeding waders consistently the most abundant functional group. Including estimated spatiotemporal variability in flooding and fire, as well as their interactions, improved model fit for all seven functional groups, explaining between 46.8% and 68.3% of variability in functional group abundances. Covariates representing longer-term variability in inundation generally performed better than shorter-term ones. For example, variability in inundation over the 5 months preceding a survey best predicted the responses of all functional groups, which also all exhibited responsiveness to the interaction between flooding and fire. We were able to interpret the responses of individual functional groups, based on the resource exploitation assumption. Overall, our results suggest that perennial waters in dryland wetlands offer functional refugia to wetland-dependent birds and highlight the indicative power of large-scale trait-based bird monitoring. Our findings demonstrate the potential utility of such a monitoring regime for dryland wetland ecosystems vulnerable to industrial-scale anthropogenic pressure and associated climate change.
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Affiliation(s)
- Frowin K Becker
- School of Biological Sciences, Victoria University of Wellington/Te Herenga Waka, Wellington, New Zealand
- National Geographic Okavango Wilderness Project, Maun, Botswana
| | | | - Heiko U Wittmer
- School of Biological Sciences, Victoria University of Wellington/Te Herenga Waka, Wellington, New Zealand
| | - Victoria Inman
- Centre for Ecosystem Science, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales, Australia
| | - Stephen Marsland
- School of Mathematics and Statistics, Victoria University of Wellington/Te Herenga Waka, Wellington, New Zealand
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8
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Renziehausen T, Frings S, Schmidt-Schippers R. 'Against all floods': plant adaptation to flooding stress and combined abiotic stresses. Plant J 2024; 117:1836-1855. [PMID: 38217848 DOI: 10.1111/tpj.16614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Revised: 11/28/2023] [Accepted: 12/15/2023] [Indexed: 01/15/2024]
Abstract
Current climate change brings with it a higher frequency of environmental stresses, which occur in combination rather than individually leading to massive crop losses worldwide. In addition to, for example, drought stress (low water availability), also flooding (excessive water) can threaten the plant, causing, among others, an energy crisis due to hypoxia, which is responded to by extensive transcriptional, metabolic and growth-related adaptations. While signalling during flooding is relatively well understood, at least in model plants, the molecular mechanisms of combinatorial flooding stress responses, for example, flooding simultaneously with salinity, temperature stress and heavy metal stress or sequentially with drought stress, remain elusive. This represents a significant gap in knowledge due to the fact that dually stressed plants often show unique responses at multiple levels not observed under single stress. In this review, we (i) consider possible effects of stress combinations from a theoretical point of view, (ii) summarize the current state of knowledge on signal transduction under single flooding stress, (iii) describe plant adaptation responses to flooding stress combined with four other abiotic stresses and (iv) propose molecular components of combinatorial flooding (hypoxia) stress adaptation based on their reported dual roles in multiple stresses. This way, more future emphasis may be placed on deciphering molecular mechanisms of combinatorial flooding stress adaptation, thereby potentially stimulating development of molecular tools to improve plant resilience towards multi-stress scenarios.
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Affiliation(s)
- Tilo Renziehausen
- Plant Biotechnology, Faculty of Biology, University of Bielefeld, 33615, Bielefeld, Germany
- Center for Biotechnology, University of Bielefeld, 33615, Bielefeld, Germany
| | - Stephanie Frings
- Plant Biotechnology, Faculty of Biology, University of Bielefeld, 33615, Bielefeld, Germany
- Center for Biotechnology, University of Bielefeld, 33615, Bielefeld, Germany
| | - Romy Schmidt-Schippers
- Plant Biotechnology, Faculty of Biology, University of Bielefeld, 33615, Bielefeld, Germany
- Center for Biotechnology, University of Bielefeld, 33615, Bielefeld, Germany
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Kodera T, Ohsaki H, Yamawo A. Aphids increase their rate of survival on emergent aquatic plants through niche construction. J Evol Biol 2024; 37:283-289. [PMID: 38340333 DOI: 10.1093/jeb/voae011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Revised: 11/25/2023] [Accepted: 01/15/2024] [Indexed: 02/12/2024]
Abstract
Flooding or rain is a threat to many insects in nature, including herbivorous invertebrates whose hosts are emergent aquatic plants. They may thus have developed particular adaptations to withstand the flooding that is a feature of emergent plants' environment. The aphid Hyalopterus pruni (Hemiptera: Aphididae) modifies the physical and chemical conditions of its habitat by periodically spreading wax around itself with its hind legs. This behaviour constitutes a form of niche construction. We hypothesized that the aphid decreases its risk of death of own or around other individuals when submerged in water by spreading wax powder secreted from its body onto the leaves of its host plant, Phragmites australis. We compared the hydrophobicity of waxed and normal leaf surfaces. Next, we compared the survival rates of wax-powdering and nonwax-powdering aphids under submerged and rainy conditions in the laboratory and in the field. Finally, we examined whether the aphids' wax-powdering behaviour increased as a result of experiencing brief submergence or rain. The surface of the waxed area was significantly more water-repellent than the surface of unwaxed leaves. The waxed areas held air bubbles when under water. In experiments, aphids without wax around themselves exhibited lower survival rates: 22.9% in laboratory conditions and 15.7% in field conditions after 48 hr underwater. In contrast, aphids that secreted wax had higher survival rates, with 41.5% and 38.2% under laboratory and field conditions, respectively, after the same duration. Aphids exposed to rainfall showed similar results. Moreover, aphids that had experienced rain or submersion for 24 hr engaged in increased wax-powdering behaviour. These results indicate that aphids reduce their risk of drowning by powdering secreted wax onto the surface of leaves around them. Our findings suggest that niche construction by herbivorous invertebrates supports their ability to utilize host plants that grow under stressful conditions, such as emergent plants that are subject to periodic inundation.
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Affiliation(s)
- Taisei Kodera
- Department of Biological Sciences, Faculty of Agriculture and Life Science, Hirosaki University, Hirosaki, Japan
| | - Haruna Ohsaki
- Department of Biological Sciences, Faculty of Agriculture and Life Science, Hirosaki University, Hirosaki, Japan
- Department of Biological Sciences, Tokyo Metropolitan University, Tokyo, Japan
| | - Akira Yamawo
- Department of Biological Sciences, Faculty of Agriculture and Life Science, Hirosaki University, Hirosaki, Japan
- Center for Ecological Research, Kyoto University, Otsu, Japan
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McCarthy JH, Linnansaari T, Curry RA. Movement and habitat shift responses of juvenile Atlantic Salmon (Salmo salar) to annually permanent stream flooding. J Fish Biol 2024; 104:698-712. [PMID: 37926443 DOI: 10.1111/jfb.15605] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 09/06/2023] [Accepted: 10/31/2023] [Indexed: 11/07/2023]
Abstract
Reservoir formation in a river system changes a lotic environment to more lacustrine conditions, with impacts throughout the ecosystem. In this study, a river reach containing typical salmonid riffle/run habitat was flooded to create a large, deep pool from June to September in each of 3 years. We test the hypothesis that juvenile Atlantic salmon (Salmo salar) with their preference for run/riffle habitats will respond to the transformation to a lentic environment by moving into adjacent lotic environments. Movements of juvenile Atlantic salmon were monitored using a combination of biotelemetry (radio- and passive integrated transponder-tagging) and electrofishing. Results showed that no tracked fish moved away from the created pool habitat. Mass-specific growth rates showed the created pool habitat resulted in net growth of juveniles. The results confirm that fish may not immediately (i.e., at least for an approximate 2 months) respond to rapid, large-scale habitat alterations by moving to find similar habitat conditions outside the altered habitat. This is most probably related to plasticity of behavior and habitat use, and no change in biological conditions to a point that would negatively impact fish growth and survival, for example food availability, competition, or predation. The results also support the hypothesis that the relative importance of physical habitat variables is not universal among streams and populations, therefore limiting the value of applying standard habitat suitability criteria and use.
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Affiliation(s)
- James H McCarthy
- Department of Science, University of New Brunswick, Fredericton, New Brunswick, Canada
| | - Tommi Linnansaari
- Department of Science, University of New Brunswick, Fredericton, New Brunswick, Canada
| | - R Allen Curry
- Department of Science, University of New Brunswick, Fredericton, New Brunswick, Canada
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Rankenberg T, van Veen H, Sedaghatmehr M, Liao CY, Devaiah MB, Stouten EA, Balazadeh S, Sasidharan R. Differential leaf flooding resilience in Arabidopsis thaliana is controlled by ethylene signaling-activated and age-dependent phosphorylation of ORESARA1. Plant Commun 2024:100848. [PMID: 38379284 DOI: 10.1016/j.xplc.2024.100848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 01/19/2024] [Accepted: 02/18/2024] [Indexed: 02/22/2024]
Abstract
The phytohormone ethylene is a major regulator of plant adaptive responses to flooding. In flooded plant tissues, ethylene quickly increases to high concentrations owing to its low solubility and diffusion rates in water. Ethylene accumulation in submerged plant tissues makes it a reliable cue for triggering flood acclimation responses, including metabolic adjustments to cope with flood-induced hypoxia. However, persistent ethylene accumulation also accelerates leaf senescence. Stress-induced senescence hampers photosynthetic capacity and stress recovery. In submerged Arabidopsis, senescence follows a strict age-dependent pattern starting with the older leaves. Although mechanisms underlying ethylene-mediated senescence have been uncovered, it is unclear how submerged plants avoid indiscriminate breakdown of leaves despite high systemic ethylene accumulation. We demonstrate that although submergence triggers leaf-age-independent activation of ethylene signaling via EIN3 in Arabidopsis, senescence is initiated only in old leaves. EIN3 stabilization also leads to overall transcript and protein accumulation of the senescence-promoting transcription factor ORESARA1 (ORE1) in both old and young leaves during submergence. However, leaf-age-dependent senescence can be explained by ORE1 protein activation via phosphorylation specifically in old leaves, independent of the previously identified age-dependent control of ORE1 via miR164. A systematic analysis of the roles of the major flooding stress cues and signaling pathways shows that only the combination of ethylene and darkness is sufficient to mimic submergence-induced senescence involving ORE1 accumulation and phosphorylation. Hypoxia, most often associated with flooding stress in plants, appears to have no role in these processes. Our results reveal a mechanism by which plants regulate the speed and pattern of senescence during environmental stresses such as flooding. Age-dependent ORE1 activity ensures that older, expendable leaves are dismantled first, thus prolonging the life of younger leaves and meristematic tissues that are vital to whole-plant survival.
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Affiliation(s)
- Tom Rankenberg
- Plant Stress Resilience, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands
| | - Hans van Veen
- Plant Stress Resilience, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands; Evolutionary Plant-Ecophysiology, Groningen Institute for Evolutionary LIfe Sciences, Nijenborgh 7, 9747 AG Groningen, the Netherlands
| | - Mastoureh Sedaghatmehr
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Che-Yang Liao
- Experimental and Computational Plant Development, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands
| | - Muthanna Biddanda Devaiah
- Experimental and Computational Plant Development, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands
| | - Evelien A Stouten
- Plant Stress Resilience, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands
| | | | - Rashmi Sasidharan
- Plant Stress Resilience, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands.
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Ethan CJ, Sanchez J, Grant L, Tustin J, Young I. Relationship between extreme precipitation and acute gastrointestinal illness in Toronto, Ontario, 2012-2022. Epidemiol Infect 2024; 152:e32. [PMID: 38329089 PMCID: PMC10894888 DOI: 10.1017/s0950268824000207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 01/03/2024] [Accepted: 01/25/2024] [Indexed: 02/09/2024] Open
Abstract
Extreme precipitation events are occurring more intensely in Canada. This can contaminate water sources with enteric pathogens, potentially increasing the risk of acute gastrointestinal illness. This study aimed to investigate the relationship between extreme precipitation and emergency department (ED) visits for acute gastrointestinal illness in Toronto from 2012 to 2022. Distributed lag non-linear models were constructed on ED visit counts with a Quasi Poisson distribution. Extreme precipitation was modelled as a 21-day lag variable, with a linear relationship assumed at levels ≧95th percentile. Separate models were also conducted on season-specific data sets. Daily precipitation and gastrointestinal illness ED visits ranged between 0 to 126 mm, and 12 to 180 visits respectively. Overall, a 10-mm increase in precipitation >95th percentile had no significant relationship with the risk of ED visits. However, stratification by seasons revealed significant relationships during spring (lags 1-19, peak at lag 14 RR = 1.04; 95% CI: 1.03, 1.06); the overall cumulative effect across the 21-day lag was also significant (RR = 1.94; 95% CI: 1.47, 2.57). Extreme precipitation has a seasonal effect on gastrointestinal health outcomes in Toronto city, suggesting varying levels of enteric pathogen exposures through drinking water or other environmental pathway during different seasons.
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Affiliation(s)
- Crystal J. Ethan
- School of Occupational and Public Health, Toronto Metropolitan University, Toronto, Ontario, Canada
| | - Johanna Sanchez
- School of Occupational and Public Health, Toronto Metropolitan University, Toronto, Ontario, Canada
| | - Lauren Grant
- Department of Population Medicine, University of Guelph, Guelph, Ontario, Canada
| | - Jordan Tustin
- School of Occupational and Public Health, Toronto Metropolitan University, Toronto, Ontario, Canada
| | - Ian Young
- School of Occupational and Public Health, Toronto Metropolitan University, Toronto, Ontario, Canada
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13
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Alied M, Salam A, Sediqi SM, Kwaah PA, Tran L, Huy NT. Disaster after disaster: the outbreak of infectious diseases in Pakistan in the wake of 2022 floods. Ann Med Surg (Lond) 2024; 86:891-898. [PMID: 38333326 PMCID: PMC10849431 DOI: 10.1097/ms9.0000000000001597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 11/27/2023] [Indexed: 02/10/2024] Open
Abstract
In June 2022, Pakistan witnessed catastrophic floods, affecting millions of people. The ensuing epidemics of cholera, cryptosporidiosis, rotavirus infections, generalized diarrhoea, typhoid and paratyphoid fevers, as well as the frequency of vector-borne diseases including malaria and dengue fever, are studied in this investigation. It also explores the latest outbreak of poliomyelitis and the frequency of respiratory diseases such COVID-19, diphtheria, and tuberculosis, as well as how floods have contributed to skin and eye problems. The report also describes the obstacles governments must overcome in order to manage these health emergencies and offers possible solutions for reducing the effects of ongoing and anticipated epidemics. This flood emphasizes the pressing need for international action and acts as an alarming indicator of the significant impact of climate change. It emphasizes how crucial it is to have effective flood response and preparation strategies in developing nations that are vulnerable to natural disasters.
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Affiliation(s)
- Marcel Alied
- Faculty of Pharmacy, University of Aleppo, Aleppo, Syria
- Online Research Club (www.onlineresearchclub.org)
| | - Abdus Salam
- Online Research Club (www.onlineresearchclub.org)
- General Surgery department, Khyber Teaching Hospital, Peshawar, Pakistan
| | - Sayed Mansoor Sediqi
- Online Research Club (www.onlineresearchclub.org)
- NOOR Eye Training Center, International Asistance Mission, Kabul, Afghanistan
| | - Patrick Amanning Kwaah
- Online Research Club (www.onlineresearchclub.org)
- Department of Internal Medicine, Yale School of Medicine, Yale-Waterbury Internal Medicine Program, Waterbury, Connecticut
| | - Linh Tran
- Institute of Fundamental and Applied Sciences, Duy Tan University, Ho Chi Minh City
- Faculty of Natural Sciences, Duy Tan University, Da Nang City, Vietnam
| | - Nguyen Tien Huy
- Online Research Club (www.onlineresearchclub.org)
- School of Tropical Medicine and Global Health, Nagasaki University, Nagasaki, Japan
- Institute of Fundamental and Applied Sciences, Duy Tan University, Ho Chi Minh City
- Faculty of Natural Sciences, Duy Tan University, Da Nang City, Vietnam
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14
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Xu E, Goel V, Baguma E, Ayebare E, Hollingsworth BD, Brown-Marusiak A, Giandomenico D, Reyes R, Ntaro M, Mulogo EM, Boyce RM. Evolution of Spatial Risk of Malaria Infection After a Pragmatic Chemoprevention Program in Response to Severe Flooding in Rural Western Uganda. J Infect Dis 2024; 229:173-182. [PMID: 37584317 PMCID: PMC10786254 DOI: 10.1093/infdis/jiad348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Revised: 04/21/2023] [Accepted: 08/14/2023] [Indexed: 08/17/2023] Open
Abstract
BACKGROUND Malaria epidemics result from extreme precipitation and flooding, which are increasing with global climate change. Local adaptation and mitigation strategies will be essential to prevent excess morbidity and mortality. METHODS We investigated the spatial risk of malaria infection at multiple timepoints after severe flooding in rural western Uganda employing longitudinal household surveys measuring parasite prevalence and leveraging remotely sensed information to inform spatial models of malaria risk in the 3 months after flooding. RESULTS We identified clusters of malaria risk emerging in areas (1) that showed the greatest changes in Normalized Difference Vegetation Index from pre- to postflood and (2) where residents were displaced for longer periods of time and had lower access to long-lasting insecticidal nets, both of which were associated with a positive malaria rapid diagnostic test result. The disproportionate risk persisted despite a concurrent chemoprevention program that achieved high coverage. CONCLUSIONS The findings enhance our understanding not only of the spatial evolution of malaria risk after flooding, but also in the context of an effective intervention. The results provide a "proof of concept" for programs aiming to prevent malaria outbreaks after flooding using a combination of interventions. Further study of mitigation strategies-and particularly studies of implementation-is urgently needed.
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Affiliation(s)
- Erin Xu
- School of Medicine, UNC School of Medicine
| | - Varun Goel
- Department of Geography
- Carolina Population Center, University of North Carolina at Chapel Hill
| | - Emmanuel Baguma
- Department of Community Health, Faculty of Medicine, Mbarara University of Science and Technology, Uganda
| | - Emmanuel Ayebare
- Department of Community Health, Faculty of Medicine, Mbarara University of Science and Technology, Uganda
| | | | | | | | | | - Moses Ntaro
- Department of Community Health, Faculty of Medicine, Mbarara University of Science and Technology, Uganda
| | - Edgar M Mulogo
- Department of Community Health, Faculty of Medicine, Mbarara University of Science and Technology, Uganda
| | - Ross M Boyce
- Carolina Population Center, University of North Carolina at Chapel Hill
- Department of Epidemiology, Gillings School of Global Public Health
- Institute for Global Health and Infectious Diseases, University of North Carolina at Chapel Hill
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15
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Abstract
Plant submergence is a major abiotic stress that impairs plant performance. Under water, reduced gas diffusion exposes submerged plant cells to an environment that is enriched in gaseous ethylene and is limited in oxygen (O2) availability (hypoxia). The capacity for plant roots to avoid and/or sustain critical hypoxia damage is essential for plants to survive waterlogging. Plants use spatiotemporal ethylene and O2 dynamics as instrumental flooding signals to modulate potential adaptive root growth and hypoxia stress acclimation responses. However, how non-adapted plant species modulate root growth behaviour during actual waterlogged conditions to overcome flooding stress has hardly been investigated. Here we discuss how changes in the root growth rate, lateral root formation, density, and growth angle of non-flood adapted plant species (mainly Arabidopsis) could contribute to avoiding and enduring critical hypoxic conditions. In addition, we discuss current molecular understanding of how ethylene and hypoxia signalling control these adaptive root growth responses. We propose that future research would benefit from less artificial experimental designs to better understand how plant roots respond to and survive waterlogging. This acquired knowledge would be instrumental to guide targeted breeding of flood-tolerant crops with more resilient root systems.
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Affiliation(s)
- Kevin Daniel
- Plant Environmental Signalling and Development, Faculty of Biology, University of Freiburg, D-79104 Freiburg, Germany
- CIBSS-Centre for Integrative Biological Signalling Studies, University of Freiburg, D-79104 Freiburg, Germany
| | - Sjon Hartman
- Plant Environmental Signalling and Development, Faculty of Biology, University of Freiburg, D-79104 Freiburg, Germany
- CIBSS-Centre for Integrative Biological Signalling Studies, University of Freiburg, D-79104 Freiburg, Germany
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16
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Rerolle F, Arnold BF, Benmarhnia T. Excess risk in infant mortality among populations living in flood-prone areas in Bangladesh: A cluster-matched cohort study over three decades, 1988 to 2017. Proc Natl Acad Sci U S A 2023; 120:e2218789120. [PMID: 38051769 PMCID: PMC10723139 DOI: 10.1073/pnas.2218789120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 10/24/2023] [Indexed: 12/07/2023] Open
Abstract
The Ganges-Brahmaputra-Meghna river basin, running through Tibet, Nepal, Bhutan, Bangladesh, and northern India, is home to more than 618 million people. Annual monsoons bring extensive flooding to the basin, with floods predicted to be more frequent and extreme due to climate change. Yet, evidence regarding the long-term impacts of floods on children's health is lacking. In this analysis, we used high-resolution maps of recent large floods in Bangladesh to identify flood-prone areas over the country. We then used propensity score techniques to identify, among 58,945 mothers interviewed in six demographic population-based surveys throughout Bangladesh, matched cohorts of exposed and unexposed mothers and leverage data on 150,081 births to estimate that living in flood-prone areas was associated with an excess risk in infant mortality of 5.3 (95% CI 2.2 to 8.4) additional deaths per 1,000 births compared to living in non-flood-prone areas over the 30-y period between 1988 and 2017, with higher risk for children born during rainy (7.9, 95% CI: 3.3 to 12.5) vs. dry months (3.1, 95% CI: -1.1 to 7.2). Finally, drawing on national-scale, high-resolution estimates of flood risk and population distribution, we estimated an excess of 152,753 (64,120 to 241,386) infant deaths were attributable to living in flood-prone areas in Bangladesh over the past 30 y, with marked heterogeneity in attributable burden by subdistrict. Our approach demonstrates the importance of measuring longer-term health impacts from floods and provides a generalizable example for how to study climate-related exposures and long-term health effects.
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Affiliation(s)
- Francois Rerolle
- Francis I. Proctor Foundation, University of California, San Francisco, CA94518
- Climate, Atmospheric Science & Physical Oceanography (CASPO), Scripps Institution of Oceanography, University of California, San Diego, CA92093
| | - Benjamin F. Arnold
- Francis I. Proctor Foundation, University of California, San Francisco, CA94518
- Department of Ophthalmology, University of California, San Francisco, CA94518
| | - Tarik Benmarhnia
- Climate, Atmospheric Science & Physical Oceanography (CASPO), Scripps Institution of Oceanography, University of California, San Diego, CA92093
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17
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Bakshi A, Choi WG, Kim SH, Gilroy S. The vacuolar Ca 2+ transporter CATION EXCHANGER 2 regulates cytosolic calcium homeostasis, hypoxic signaling, and response to flooding in Arabidopsis thaliana. New Phytol 2023; 240:1830-1847. [PMID: 37743731 DOI: 10.1111/nph.19274] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 08/23/2023] [Indexed: 09/26/2023]
Abstract
Flooding represents a major threat to global agricultural productivity and food security, but plants are capable of deploying a suite of adaptive responses that can lead to short- or longer-term survival to this stress. One cellular pathway thought to help coordinate these responses is via flooding-triggered Ca2+ signaling. We have mined publicly available transcriptomic data from Arabidopsis subjected to flooding or low oxygen stress to identify rapidly upregulated, Ca2+ -related transcripts. We then focused on transporters likely to modulate Ca2+ signals. Candidates emerging from this analysis included AUTOINHIBITED Ca2+ ATPASE 1 and CATION EXCHANGER 2. We therefore assayed mutants in these genes for flooding sensitivity at levels from growth to patterns of gene expression and the kinetics of flooding-related Ca2+ changes. Knockout mutants in CAX2 especially showed enhanced survival to soil waterlogging coupled with suppressed induction of many marker genes for hypoxic response and constitutive activation of others. CAX2 mutants also generated larger and more sustained Ca2+ signals in response to both flooding and hypoxic challenges. CAX2 is a Ca2+ transporter located on the tonoplast, and so these results are consistent with an important role for vacuolar Ca2+ transport in the signaling systems that trigger flooding response.
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Affiliation(s)
- Arkadipta Bakshi
- Department of Botany, University of Wisconsin, Birge Hall, 430 Lincoln Dr., Madison, WI, 53706, USA
| | - Won-Gyu Choi
- Department of Biochemistry and Molecular Biology, 1664 N. Virginia St, Reno, NV, 89557, USA
| | - Su-Hwa Kim
- Department of Biochemistry and Molecular Biology, 1664 N. Virginia St, Reno, NV, 89557, USA
| | - Simon Gilroy
- Department of Botany, University of Wisconsin, Birge Hall, 430 Lincoln Dr., Madison, WI, 53706, USA
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18
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Munala L, Allen EM, Frederick AJ, Ngũnjiri A. Climate Change, Extreme Weather, and Intimate Partner Violence in East African Agrarian-Based Economies. Int J Environ Res Public Health 2023; 20:7124. [PMID: 38063554 PMCID: PMC10706456 DOI: 10.3390/ijerph20237124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 11/22/2023] [Accepted: 11/28/2023] [Indexed: 12/18/2023]
Abstract
Severe weather events can be a catalyst for intimate partner violence, particularly in agricultural settings. This research explores the association between weather and violence in parts of East Africa that rely on subsistence farming. We used IPUMS-DHS data from Uganda in 2006, Zimbabwe in 2010, and Mozambique in 2011 for intimate partner violence frequency and EM-DAT data to identify weather events by region in the year of and year prior to IPUMS-DHS data collection. This work is grounded in a conceptual framework that illustrates the mechanisms through which violence increases. We used logistic regression to estimate the odds of reporting violence in regions with severe weather events. The odds of reporting violence were 25% greater in regions with severe weather compared to regions without in Uganda (OR = 1.25, 95% CI: 1.11-1.41), 38% greater in Zimbabwe (OR = 1.38, 95% CI: 1.13-1.70), and 91% greater in Mozambique (OR = 1.91, 95% CI: 1.64-2.23). Our results add to the growing body of evidence showing that extreme weather can increase women's and girls' vulnerability to violence. Moreover, this analysis demonstrates that climate justice and intimate partner violence must be addressed together.
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Affiliation(s)
- Leso Munala
- Public Health Department, St. Catherine University, St. Paul, MN 55105, USA;
| | - Elizabeth M. Allen
- Public Health Department, St. Catherine University, St. Paul, MN 55105, USA;
| | - Andrew J. Frederick
- Public Health Department, St. Catherine University, St. Paul, MN 55105, USA;
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19
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Yemelyanov VV, Puzanskiy RK, Shishova MF. Plant Life with and without Oxygen: A Metabolomics Approach. Int J Mol Sci 2023; 24:16222. [PMID: 38003412 PMCID: PMC10671363 DOI: 10.3390/ijms242216222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 11/09/2023] [Accepted: 11/10/2023] [Indexed: 11/26/2023] Open
Abstract
Oxygen deficiency is an environmental challenge which affects plant growth, the development and distribution in land and aquatic ecosystems, as well as crop yield losses worldwide. The capacity to exist in the conditions of deficiency or the complete lack of oxygen depends on a number of anatomic, developmental and molecular adaptations. The lack of molecular oxygen leads to an inhibition of aerobic respiration, which causes energy starvation and the acceleration of glycolysis passing into fermentations. We focus on systemic metabolic alterations revealed with the different approaches of metabolomics. Oxygen deprivation stimulates the accumulation of glucose, pyruvate and lactate, indicating the acceleration of the sugar metabolism, glycolysis and lactic fermentation, respectively. Among the Krebs-cycle metabolites, only the succinate level increases. Amino acids related to glycolysis, including the phosphoglycerate family (Ser and Gly), shikimate family (Phe, Tyr and Trp) and pyruvate family (Ala, Leu and Val), are greatly elevated. Members of the Asp family (Asn, Lys, Met, Thr and Ile), as well as the Glu family (Glu, Pro, Arg and GABA), accumulate as well. These metabolites are important members of the metabolic signature of oxygen deficiency in plants, linking glycolysis with an altered Krebs cycle and allowing alternative pathways of NAD(P)H reoxidation to avoid the excessive accumulation of toxic fermentation products (lactate, acetaldehyde, ethanol). Reoxygenation induces the downregulation of the levels of major anaerobically induced metabolites, including lactate, succinate and amino acids, especially members of the pyruvate family (Ala, Leu and Val), Tyr and Glu family (GABA and Glu) and Asp family (Asn, Met, Thr and Ile). The metabolic profiles during native and environmental hypoxia are rather similar, consisting in the accumulation of fermentation products, succinate, fumarate and amino acids, particularly Ala, Gly and GABA. The most intriguing fact is that metabolic alterations during oxidative stress are very much similar, with plant response to oxygen deprivation but not to reoxygenation.
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Affiliation(s)
- Vladislav V. Yemelyanov
- Department of Genetics and Biotechnology, Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia
| | - Roman K. Puzanskiy
- Department of Plant Physiology and Biochemistry, Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (R.K.P.); (M.F.S.)
- Laboratory of Analytical Phytochemistry, Komarov Botanical Institute of the Russian Academy of Sciences, 197376 St. Petersburg, Russia
| | - Maria F. Shishova
- Department of Plant Physiology and Biochemistry, Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; (R.K.P.); (M.F.S.)
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20
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Aslam A, Mahmood A, Ur-Rehman H, Li C, Liang X, Shao J, Negm S, Moustafa M, Aamer M, Hassan MU. Plant Adaptation to Flooding Stress under Changing Climate Conditions: Ongoing Breakthroughs and Future Challenges. Plants (Basel) 2023; 12:3824. [PMID: 38005721 PMCID: PMC10675391 DOI: 10.3390/plants12223824] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 10/24/2023] [Accepted: 11/02/2023] [Indexed: 11/26/2023]
Abstract
Climate-change-induced variations in temperature and rainfall patterns are a serious threat across the globe. Flooding is the foremost challenge to agricultural productivity, and it is believed to become more intense under a changing climate. Flooding is a serious form of stress that significantly reduces crop yields, and future climatic anomalies are predicted to make the problem even worse in many areas of the world. To cope with the prevailing flooding stress, plants have developed different morphological and anatomical adaptations in their roots, aerenchyma cells, and leaves. Therefore, researchers are paying more attention to identifying developed and adopted molecular-based plant mechanisms with the objective of obtaining flooding-resistant cultivars. In this review, we discuss the various physiological, anatomical, and morphological adaptations (aerenchyma cells, ROL barriers (redial O2 loss), and adventitious roots) and the phytohormonal regulation in plants under flooding stress. This review comprises ongoing innovations and strategies to mitigate flooding stress, and it also provides new insights into how this knowledge can be used to improve productivity in the scenario of a rapidly changing climate and increasing flood intensity.
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Affiliation(s)
- Amna Aslam
- Department of Botany, University of Agriculture Faisalabad, Faisalabad 38040, Pakistan; (A.A.); (H.U.-R.)
| | - Athar Mahmood
- Department of Agronomy, University of Agriculture Faisalabad, Faisalabad 38040, Pakistan;
| | - Hafeez Ur-Rehman
- Department of Botany, University of Agriculture Faisalabad, Faisalabad 38040, Pakistan; (A.A.); (H.U.-R.)
| | - Cunwu Li
- Guangxi Key Laboratory of Water Engineering Materials and Structures, Guangxi Institute of Water Resources Research, Nanning 530023, China; (C.L.); (J.S.)
| | - Xuewen Liang
- Guangxi Key Laboratory of Water Engineering Materials and Structures, Guangxi Institute of Water Resources Research, Nanning 530023, China; (C.L.); (J.S.)
| | - Jinhua Shao
- Guangxi Key Laboratory of Water Engineering Materials and Structures, Guangxi Institute of Water Resources Research, Nanning 530023, China; (C.L.); (J.S.)
| | - Sally Negm
- Department of Life Sciences, College of Science and Art Mahyel Aseer, King Khalid University, Abha 62529, Saudi Arabia;
| | - Mahmoud Moustafa
- Department of Biology, College of Science, King Khalid University, Abha 61421, Saudi Arabia;
| | - Muhammad Aamer
- Research Center on Ecological Sciences, Jiangxi Agricultural University, Nanchang 330045, China; (M.A.); (M.U.H.)
| | - Muhammad Umair Hassan
- Research Center on Ecological Sciences, Jiangxi Agricultural University, Nanchang 330045, China; (M.A.); (M.U.H.)
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21
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Mwakyusa L, Heredia MC, Kilasi NL, Madege RR, Herzog M, Dixit S. Screening of potential donors for anaerobic stress tolerance during germination in rice. Front Plant Sci 2023; 14:1261101. [PMID: 38023850 PMCID: PMC10667690 DOI: 10.3389/fpls.2023.1261101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Accepted: 10/25/2023] [Indexed: 12/01/2023]
Abstract
The rising cost of transplanting rice has made direct seeding an affordable alternative for rice establishment, particularly in Africa. However, direct seeding, while cost-effective, faces crop establishment challenges due to flooding. Uncontrolled water, driven by erratic rains in low-lying areas or uneven fields, limit germination. Rice possesses the unique ability of anaerobic germination, enabling it to sprout and emerge in oxygen-deprived conditions. Understanding rice's response to anaerobic stress during germination is crucial for resilience breeding. Africa, although relying on direct seeding, has made limited progress in addressing flooding during germination compared to Asia. Anaerobic stress tolerance ensures successful crop emergence even in oxygen-limited environments and can help suppress weeds, a significant challenge in direct-seeded rice cultivation. This study aims to contribute by screening for potential rice donors exhibiting anaerobic stress tolerance. We screened 200 rice genotypes at Sokoine University of Agriculture (SUA) in Morogoro, Tanzania, primarily focusing on landraces with untapped potential. Using an alpha lattice design, we conducted two anaerobic experiments in September and October 2022, adding 7 cm of standing water immediately after dry seeding for flooded and maintaining a 2 cm water level after germination in the control for duration of 21 days. We identified potential donors based on selection index computed from genomic estimated breeding values (GEBVs) using eight variables: germination at 14 DAS, germination at 21 DAS, seedling height at 14 DAS, seedling height at 21 DAS, shoot dry matter at 21 DAS, root dry matter at 21 DAS, culm diameter at 21 DAS, and root length at 21DAS. Ten genotypes emerged as the most promising, exhibiting at least 70% germination in floodwater at 21 DAS and greater selection indices. These genotypes were like: Afaa Mwanza 1/159, Rojomena 271/10, Kubwa Jinga, Wahiwahi, Magongo ya Wayungu, Mpaka wa Bibi, Mwangaza, Tarabinzona, IB126-Bug 2013A, and Kanamalia with respective percentages of 75, 74, 71, 86, 75, 80, 71, 80, 70, and 73. These findings contribute to global efforts to mitigate the impacts of flooding during germination. These donors, will be potential to enrich the gene pool for anaerobic germination, providing valuable resources for breeding for flooding tolerance.
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Affiliation(s)
- Lupakisyo Mwakyusa
- Department of Crop Science and Horticulture, College of Agriculture, Sokoine University of Agriculture, Morogoro, Tanzania
- Department of Research and Innovation, Tanzania Agricultural Research Institute, Kigoma, Tanzania
| | - Maria Cristina Heredia
- Rice Breeding Innovations Department, International Rice Research Institute, Los Baños, Laguna, Philippines
| | - Newton Lwiyiso Kilasi
- Department of Crop Science and Horticulture, College of Agriculture, Sokoine University of Agriculture, Morogoro, Tanzania
| | - Richard R. Madege
- Department of Crop Science and Horticulture, College of Agriculture, Sokoine University of Agriculture, Morogoro, Tanzania
| | - Max Herzog
- Department of Biology, University of Copenhagen, Copenhagen, Denmark
| | - Shalabh Dixit
- Rice Breeding Innovations Department, International Rice Research Institute, Los Baños, Laguna, Philippines
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22
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Davies B, Harwood RH. The climate and biodiversity crises-impacts and opportunities for older people. Age Ageing 2023; 52:afad213. [PMID: 38016015 DOI: 10.1093/ageing/afad213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Indexed: 11/30/2023] Open
Affiliation(s)
- Bethan Davies
- Stroke Department, Royal Sussex County Hospital, Brighton BN2 5BE, United Kingdom
| | - Rowan H Harwood
- School of Health Sciences, University of Nottingham, Nottingham NG7 2HA, United Kingdom
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23
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Burbank AJ, Espaillat AE, Hernandez ML. Community- and neighborhood-level disparities in extreme climate exposure: Implications for asthma and atopic disease outcomes. J Allergy Clin Immunol 2023; 152:1084-1086. [PMID: 37742935 PMCID: PMC10941053 DOI: 10.1016/j.jaci.2023.09.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 09/19/2023] [Accepted: 09/19/2023] [Indexed: 09/26/2023]
Affiliation(s)
- Allison J Burbank
- Division of Allergy and Immunology, University of North Carolina School of Medicine, Chapel Hill, NC; Children's Research Institute, University of North Carolina, Chapel Hill, NC.
| | - Andre E Espaillat
- Division of Pediatric Pulmonology, Department of Pediatrics, University of North Carolina School of Medicine, Chapel Hill, NC
| | - Michelle L Hernandez
- Division of Allergy and Immunology, University of North Carolina School of Medicine, Chapel Hill, NC; Children's Research Institute, University of North Carolina, Chapel Hill, NC
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24
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Sahin B, Kimberly Raymond S, Ntourmas F, Pastusiak R, Wiesner-Fleischer K, Fleischer M, Simon E, Hinrichsen O. Accumulation of Liquid Byproducts in an Electrolyte as a Critical Factor That Compromises Long-Term Functionality of CO 2-to-C 2H 4 Electrolysis. ACS Appl Mater Interfaces 2023; 15:45844-45854. [PMID: 37729427 DOI: 10.1021/acsami.3c08454] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/22/2023]
Abstract
Electrochemical conversion of CO2 using Cu-based gas diffusion electrodes opens the way to green chemical production as an alternative to thermocatalytic processes and a storage solution for intermittent renewable electricity. However, diverse challenges, including short lifetimes, currently inhibit their industrial usage. Among well-studied determinants such as catalyst characteristics and electrode architecture, possible effects of byproduct accumulation in the electrolyte as an operational factor have not been elucidated. This work quantifies the influence of ethanol, n-propanol, and formate accumulation on selectivity, stability, and cell potential in a CO2-to-C2H4 electrolyzer. Alcohols accelerated flooding by degrading the hydrophobic electrode characteristics, undermining selective and stable ethylene formation. Furthermore, high alcohol concentrations triggered the catalyst layer's abrasion and structural disfigurements in the Nafion 117 membrane, leading to high cell potentials. Therefore, continuous removal of alcohols from the electrolyte medium or substantial modifications in the cell components must be considered to ensure long-term performing CO2-to-C2H4 electrolyzers.
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Affiliation(s)
- Baran Sahin
- Innovation Department, Siemens Energy Global GmbH & Co. KG, Otto-Hahn-Ring 6, 81739 Munich, Germany
- Catalysis Research Center and Chemistry Department, Technical University of Munich, Lichtenbergstr. 4, 85748 Garching b Munich, Germany
| | - Samantha Kimberly Raymond
- Innovation Department, Siemens Energy Global GmbH & Co. KG, Otto-Hahn-Ring 6, 81739 Munich, Germany
- Catalysis Research Center and Chemistry Department, Technical University of Munich, Lichtenbergstr. 4, 85748 Garching b Munich, Germany
| | - Felix Ntourmas
- Technology Department, Siemens AG, Schuckertstr. 2, 91058 Erlangen, Germany
| | - Remigiusz Pastusiak
- Innovation Department, Siemens Energy Global GmbH & Co. KG, Otto-Hahn-Ring 6, 81739 Munich, Germany
| | | | - Maximilian Fleischer
- Innovation Department, Siemens Energy Global GmbH & Co. KG, Otto-Hahn-Ring 6, 81739 Munich, Germany
| | - Elfriede Simon
- Innovation Department, Siemens Energy Global GmbH & Co. KG, Otto-Hahn-Ring 6, 81739 Munich, Germany
| | - Olaf Hinrichsen
- Catalysis Research Center and Chemistry Department, Technical University of Munich, Lichtenbergstr. 4, 85748 Garching b Munich, Germany
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Mian G, Cipriani G, Firrao G, Martini M, Ermacora P. Genetic diversity of Actinidia spp. shapes the oomycete pattern associated with Kiwifruit Vine Decline Syndrome (KVDS). Sci Rep 2023; 13:16449. [PMID: 37777544 PMCID: PMC10542793 DOI: 10.1038/s41598-023-43754-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Accepted: 09/27/2023] [Indexed: 10/02/2023] Open
Abstract
Kiwifruit Vine Decline Syndrome (KVDS) is an important soil-borne disease for the Italian kiwifruit industry, causing €300,000 in economic losses in 2020 alone. So far, the organisms recognized as involved in the aetiology of KVDS mainly belong to the Oomycota. As no effective management strategies exist, a promising approach to overcoming KVDS is the use of resistant species as rootstocks or for inclusion in breeding programs. Several Actinidia genotypes showing different level of resistance to KVDS were grown in disease-promoting soils. A metabarcoding approach was set up to identify KVDS-associated oomycetes and investigate whether the main species involved may vary according to plant genotype. Our results clearly showed significant differences between the genotypes in terms of oomycetes present in both plant rhizosphere and endosphere, which were strongly correlated with the symptoms displayed. We found out that the resistance of Actinidia macrosperma to KVDS is related to its ability to shape the pathobiome, particularly as far as the endosphere is concerned. In our conditions, Phytophthora sp. was predominantly found in sensitive genotypes, whilst Globisporangium intermedium was mainly detected in asymptomatic plants, suggesting that the latter species could compete with the recruitment of Phytophthora sp. in plants with different levels of resistance, consequently, explaining the onset of symptoms and the resistance condition.
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Affiliation(s)
- Giovanni Mian
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Via delle Scienze 206, 33100, Udine, Italy
| | - Guido Cipriani
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Via delle Scienze 206, 33100, Udine, Italy
| | - Giuseppe Firrao
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Via delle Scienze 206, 33100, Udine, Italy
| | - Marta Martini
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Via delle Scienze 206, 33100, Udine, Italy
| | - Paolo Ermacora
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Via delle Scienze 206, 33100, Udine, Italy.
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Prechsl UE, Mejia-Aguilar A, Cullinan CB. In vivo spectroscopy and machine learning for the early detection and classification of different stresses in apple trees. Sci Rep 2023; 13:15857. [PMID: 37739998 PMCID: PMC10517117 DOI: 10.1038/s41598-023-42428-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Accepted: 09/10/2023] [Indexed: 09/24/2023] Open
Abstract
The use of in vivo spectroscopy to detect plant stress in its early stages has the potential to enhance food safety and reduce the need for plant protection products. However, differentiating between various stress types before symptoms appear remains poorly studied. In this study, we investigated the potential of Vis-NIR spectroscopy to differentiate between stress types in apple trees (Malus x domestica Borkh.) exposed to apple scab, waterlogging, and herbicides in a greenhouse. Using a spectroradiometer, we collected spectral signatures of leaves still attached to the tree and utilized machine learning techniques to develop predictive models for detecting stress presence and classifying stress type as early as 1-5 days after exposure. Our findings suggest that changes in spectral reflectance at multiple regions accurately differentiate various types of plant stress on apple trees. Our models were highly accurate (accuracies between 0.94 and 1) when detecting the general presence of stress at an early stage. The wavelengths important for classification relate to photosynthesis via pigment functioning (684 nm) and leaf water (~ 1800-1900 nm), which may be associated with altered gas exchange as a short-term stress response. Overall, our study demonstrates the potential of spectral technology and machine learning for early diagnosis of plant stress, which could lead to reduced environmental burden through optimizing resource utilization in agriculture.
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Affiliation(s)
- Ulrich E Prechsl
- Laimburg Research Centre, Laimburg 6, 39040, Auer, South Tyrol, Italy.
| | | | - Cameron B Cullinan
- Laimburg Research Centre, Laimburg 6, 39040, Auer, South Tyrol, Italy
- Faculty of Agricultural, Environmental and Food Sciences, Free University of Bolzano, Piazza Università 1, 39100, Bolzano, South Tyrol, Italy
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Okonta SD, Olaomi J. Applying network flow optimisation techniques to minimise cost associated with flood disaster. Jamba 2023; 15:1444. [PMID: 37795472 PMCID: PMC10546255 DOI: 10.4102/jamba.v15i1.1444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 06/09/2023] [Indexed: 10/06/2023]
Abstract
Flooding disasters in most parts of the world has become worrisome to the government and to the humanitarian emergency organisations. In this article, the authors proffer a mathematical solution to minimise the cost of rescue operations, using stochastic programming of a multicommodity and multimodel network flow. In the formulation, the authors considered four supply depots: national centre depot (NCD), three local distribution centres (LDCs) and six points of distribution (PODs). Two vehicle types were helicopters by air and trucks by land. Three basic types of emergency relief materials include food, water and medical items. Three basic scenarios were mild, medium and severe situations with associated probabilities of 0.25, 0.5 and 0.25, respectively. The formulated model was solved using the LINGO software. The results show that the formulated model effectively reduced the cost of distribution during emergency rescue operation, as there was a thin line between demand and met demand. For the scope of this model, a minimised cost of about $1016673.37 is sufficient to carry out successful rescue operations. Contribution The estimated amount of $1016673.37 becomes a benchmark for the government, research agencies and other developmental agencies for the purpose of planning. By using the air and road transport modes, and allowing direct and indirect transportation to the PODs, it saved time, resulting in many lives being saved.
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Affiliation(s)
- Simon D Okonta
- Department of Statistics, School of Applied Sciences and Technology, Delta State Polytechnic, Otefe-Oghara, Nigeria
- School of Statistics, College of Science, Engineering and Technology, University of South Africa, Johannesburg, South Africa
| | - John Olaomi
- School of Statistics, College of Science, Engineering and Technology, University of South Africa, Johannesburg, South Africa
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Abiri R, Abdul-Hamid H, Leung DWM. Editorial: Advanced insights into environmental stress and tolerance mechanisms in forest trees. Front Plant Sci 2023; 14:1273663. [PMID: 37771484 PMCID: PMC10523773 DOI: 10.3389/fpls.2023.1273663] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2023] [Accepted: 09/05/2023] [Indexed: 09/30/2023]
Affiliation(s)
- Rambod Abiri
- Department of Forestry Science and Biodiversity, Faculty of Forestry and Environment, Universiti Putra Malaysia (UPM), Serdang, Selangor, Malaysia
- Department of Plant Agriculture, University of Guelph, Guelph, ON, Canada
| | - Hazandy Abdul-Hamid
- Department of Forestry Science and Biodiversity, Faculty of Forestry and Environment, Universiti Putra Malaysia (UPM), Serdang, Selangor, Malaysia
- Laboratory of Bioresource Management, Institute of Tropical Forestry and Forest Products, Universiti Putra Malaysia (UPM) Serdang, Selangor, Malaysia
| | - David WM Leung
- School of Biological Sciences, University of Canterbury, Christchurch, New Zealand
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Abernathy HN, Crawford DA, Chandler RB, Garrison EP, Conner LM, Miller KV, Cherry MJ. Rain, recreation and risk: Human activity and ecological disturbance create seasonal risk landscapes for the prey of an ambush predator. J Anim Ecol 2023; 92:1840-1855. [PMID: 37415521 DOI: 10.1111/1365-2656.13976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Accepted: 05/15/2023] [Indexed: 07/08/2023]
Abstract
Predation risk and prey responses exhibit fluctuations in space and time. Seasonal ecological disturbances can alter landscape structure and permeability to influence predator activity and efficacy, creating predictable patterns of risk for prey (seasonal risk landscapes). This may create corresponding seasonal shifts in antipredator behaviour, mediated by species ecology and trade-offs between risk and resources. Yet, how human recreation interacts with seasonal risk landscapes and antipredator behaviour remains understudied. In South Florida, we investigated the impact of a seasonal ecological disturbance, specifically flooding, which is inversely related to human activity, on interactions between Florida panthers (Puma concolor coryi) and white-tailed deer (Odocoileus virginianus). We hypothesized that human activity and ecological disturbances would interact with panther-deer ecology, resulting in the emergence of two distinct seasonal landscapes of predation risk and the corresponding antipredator responses. We conducted camera trap surveys across southwestern Florida to collect detection data on humans, panthers and deer. We analysed the influence of human site use and flooding on deer and panther detection probability, co-occurrence and diel activity during the flooded and dry seasons. Flooding led to decreased panther detections and increased deer detections, resulting in reduced deer-panther co-occurrence during the flooded season. Panthers exhibited increased nocturnality and reduced diel activity overlap with deer in areas with higher human activity. Supporting our hypothesis, panthers' avoidance of human recreation and flooding created distinct risk schedules for deer, driving their antipredator behaviour. Deer utilized flooded areas to spatially offset predation risk during the flooded season while increasing diurnal activity in response to human recreation during the dry season. We highlight the importance of understanding how competing risks and ecological disturbances influence predator and prey behaviour, leading to the generation of seasonal risk landscapes and antipredator responses. We emphasize the role of cyclical ecological disturbances in shaping dynamic predator-prey interactions. Furthermore, we highlight how human recreation may function as a 'temporal human shield,' altering seasonal risk landscapes and antipredator responses to reduce encounter rates between predators and prey.
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Affiliation(s)
- H N Abernathy
- Fish and Wildlife Conservation, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, USA
- Caesar Kleberg Wildlife Research Institute, Texas A&M University-Kingsville, Kingsville, Texas, USA
- Haub School of Environment and Natural Resources, University of Wyoming, Laramie, Wyoming, USA
| | - D A Crawford
- Caesar Kleberg Wildlife Research Institute, Texas A&M University-Kingsville, Kingsville, Texas, USA
- Jones Center at Ichauway, Newton, Georgia, USA
| | - R B Chandler
- Warnell School of Forestry and Natural Resources, Athens, Georgia, USA
| | - E P Garrison
- Florida Fish and Wildlife Conservation Commission, Tallahassee, Florida, USA
| | - L M Conner
- Jones Center at Ichauway, Newton, Georgia, USA
| | - K V Miller
- Warnell School of Forestry and Natural Resources, Athens, Georgia, USA
| | - M J Cherry
- Caesar Kleberg Wildlife Research Institute, Texas A&M University-Kingsville, Kingsville, Texas, USA
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Abstract
Abiotic stresses such as drought and heat continue to impact crop production in a warming world. This review distinguishes seven inherent capacities that enable plants to respond to abiotic stresses and continue growing, although at a reduced rate, to achieve a productive yield. These are the capacities to selectively take up essential resources, store them and supply them to different plant parts, generate the energy required for cellular functions, conduct repairs to maintain plant tissues, communicate between plant parts, manage existing structural assets in the face of changed circumstances, and shape-shift through development to be efficient in different environments. By illustration, we show how all seven plant capacities are important for reproductive success of major crop species during drought, salinity, temperature extremes, flooding, and nutrient stress. Confusion about the term 'oxidative stress' is explained. This allows us to focus on the strategies that enhance plant adaptation by identifying key responses that can be targets for plant breeding.
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Affiliation(s)
- Rana Munns
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
| | - A Harvey Millar
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia
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Loreti E, Perata P. ERFVII transcription factors and their role in the adaptation to hypoxia in Arabidopsis and crops. Front Genet 2023; 14:1213839. [PMID: 37662843 PMCID: PMC10469677 DOI: 10.3389/fgene.2023.1213839] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 08/01/2023] [Indexed: 09/05/2023] Open
Abstract
In this review, we focus on ethylene transcription factors (ERFs), which are a crucial family of transcription factors that regulate plant development and stress responses. ERFVII transcription factors have been identified and studied in several crop species, including rice, wheat, maize, barley, and soybean. These transcription factors are known to be involved in regulating the plant's response to low oxygen stress-hypoxia and could thus improve crop yields under suboptimal growing conditions. In rice (Oryza sativa) several ERFVII genes have been identified and characterized, including SUBMERGENCE 1A (SUB1A), which enables rice to tolerate submergence. The SUB1A gene was used in the development of SUB1 rice varieties, which are now widely grown in flood-prone areas and have been shown to improve yields and farmer livelihoods. The oxygen sensor in plants was discovered using the model plant Arabidopsis. The mechanism is based on the destabilization of ERFVII protein via the N-degron pathway under aerobic conditions. During hypoxia, the stabilized ERFVIIs translocate to the nucleus where they activate the transcription of hypoxia-responsive genes (HRGs). In summary, the identification and characterization of ERFVII transcription factors and their mechanism of action could lead to the development of new crop varieties with improved tolerance to low oxygen stress, which could have important implications for global food security.
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Affiliation(s)
- Elena Loreti
- Institute of Agricultural Biology and Biotechnology, CNR, National Research Council, Pisa, Italy
| | - Pierdomenico Perata
- PlantLab, Center of Plant Sciences, Sant’Anna School of Advanced Studies, Pisa, Italy
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Davis SA, Carpenter DM, Loughlin CE, Garcia N, Sleath B. Impact of Hurricane Matthew on a Cohort of Adolescents With Asthma in North Carolina. Disaster Med Public Health Prep 2023; 17:e446. [PMID: 37554119 DOI: 10.1017/dmp.2023.115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/10/2023]
Abstract
OBJECTIVE The aim of this study was to look at a cohort of adolescents who were already enrolled in a randomized controlled trial to see (1) how demographics were associated with hurricane impact, and (2) how hurricane impact was associated with reported asthma quality of life. METHODS One hundred fifty-one adolescents ages 11-17 and their parents enrolled in a randomized controlled trial at 2 sites in southeastern North Carolina completed questions about asthma quality of life, demographics, and the impact of Hurricane Matthew. RESULTS The most common effects of Hurricane Matthew were that the family's home was damaged or flooded (32.5%), the school was damaged or flooded (31.8%), and the home had mold or mildew as a result of flooding or damage (25.8%). Problems with access to care were more common for families whose adolescent was non-White (P = 0.04), on Medicaid (P = 0.05), or if the family spoke Spanish at home (P < 0.001). Being affected by the hurricane was negatively associated with asthma quality of life. CONCLUSIONS Hurricane Matthew had significant impact on the health of adolescents with asthma in the affected region, especially in the most vulnerable populations. Providers should ensure that families of adolescents with asthma have a hurricane plan to mitigate impact on their children's health.
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Affiliation(s)
- Scott A Davis
- Division of Pharmaceutical Outcomes and Policy, University of North Carolina Eshelman School of Pharmacy, Chapel Hill, North Carolina, USA
| | - Delesha M Carpenter
- Division of Pharmaceutical Outcomes and Policy, University of North Carolina Eshelman School of Pharmacy, Chapel Hill, North Carolina, USA
| | - Ceila E Loughlin
- Department of Pediatric Pulmonology, University of North Carolina School of Medicine, Chapel Hill, North Carolina, USA
| | - Nacire Garcia
- Division of Pharmaceutical Outcomes and Policy, University of North Carolina Eshelman School of Pharmacy, Chapel Hill, North Carolina, USA
| | - Betsy Sleath
- Division of Pharmaceutical Outcomes and Policy, University of North Carolina Eshelman School of Pharmacy, Chapel Hill, North Carolina, USA
- Cecil G. Sheps Center for Health Services Research, Chapel Hill, North Carolina, USA
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Müller C, Ouédraogo WA, Schwarz M, Barteit S, Sauerborn R. The effects of climate change-induced flooding on harvest failure in Burkina Faso: case study. Front Public Health 2023; 11:1166913. [PMID: 37614457 PMCID: PMC10442567 DOI: 10.3389/fpubh.2023.1166913] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Accepted: 07/24/2023] [Indexed: 08/25/2023] Open
Abstract
Background Climate change leads to more frequent and severe extreme weather events including floods, heatwaves, heavy rainfalls, and droughts. In contrast to the majority of research on weather extremes in sub-Saharan Africa, which focus primarily on how a lack of rainfall causes droughts, this paper aims to elucidate the effect of flooding on harvest failure in rural Burkina Faso. Methods We conducted a case study in north-western Nouna, Burkina Faso, between August and December 2021 covering a study population of n = 180 participants. The study comprised four components: (i) interviews with farmers (n = 180) on whether any of their fields had been inundated and if so, on harvest loss on these fields; (ii) determining the feasibility of using Sentinel-2 satellite images to validate study participants reports of floods; (iii) characterizing short-term weather including frequency and duration, of extreme rainfall events within the study area, as well as comparing cumulative rainfall (long-term) over the past 50 years; and (v), estimating both the food energy and economic loss of harvest failure due to flooding. Results 49% of interviewed farmers (n = 88) reported that floods had damaged at least one of their fields. Some fields (n = 13, 7%) had no harvest due to flooding, while some farmers (n = 14, 8%) had lost part of their harvest. Images from the Sentinel-2-Satellite indicated that reported and remotely observed flooding were consistent. According to time series of data from the local weather station, there has been an increase irregular rainfall distribution and at the same time of cumulative annual rainfall in Nouna. Furthermore, a first illustrative calculation allowed us to estimate the amount of energy lost when one hectare of a common crop is flooded. Conclusion This case study demonstrated that flood-related harvest failures leading to crop losses in sub-Saharan Africa, exemplified by Burkina Faso, are likely to be substantial. This study serves as a proof-of-principle for flooding effects on food security. This could provide more detail for agricultural adaptation and mitigation strategies. Inundation-vulnerable fields need alternative and novel management practices, which may only be effectively implemented if agricultural institutions and national policy-making bodies receive evidence of flooding e.g., from remote sensing.
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Affiliation(s)
- Charlotte Müller
- Heidelberg Institute of Global Health (HIGH), Faculty of Medicine and University Hospital, Heidelberg University, Heidelberg, Germany
- Faculty of Health Science and Medicine, University of Lucerne, Lucerne, Switzerland
| | | | | | - Sandra Barteit
- Heidelberg Institute of Global Health (HIGH), Faculty of Medicine and University Hospital, Heidelberg University, Heidelberg, Germany
| | - Rainer Sauerborn
- Heidelberg Institute of Global Health (HIGH), Faculty of Medicine and University Hospital, Heidelberg University, Heidelberg, Germany
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Zubrycka A, Dambire C, Dalle Carbonare L, Sharma G, Boeckx T, Swarup K, Sturrock CJ, Atkinson BS, Swarup R, Corbineau F, Oldham NJ, Holdsworth MJ. ERFVII action and modulation through oxygen-sensing in Arabidopsis thaliana. Nat Commun 2023; 14:4665. [PMID: 37537157 PMCID: PMC10400637 DOI: 10.1038/s41467-023-40366-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Accepted: 07/25/2023] [Indexed: 08/05/2023] Open
Abstract
Oxygen is a key signalling component of plant biology, and whilst an oxygen-sensing mechanism was previously described in Arabidopsis thaliana, key features of the associated PLANT CYSTEINE OXIDASE (PCO) N-degron pathway and Group VII ETHYLENE RESPONSE FACTOR (ERFVII) transcription factor substrates remain untested or unknown. We demonstrate that ERFVIIs show non-autonomous activation of root hypoxia tolerance and are essential for root development and survival under oxygen limiting conditions in soil. We determine the combined effects of ERFVIIs in controlling gene expression and define genetic and environmental components required for proteasome-dependent oxygen-regulated stability of ERFVIIs through the PCO N-degron pathway. Using a plant extract, unexpected amino-terminal cysteine sulphonic acid oxidation level of ERFVIIs was observed, suggesting a requirement for additional enzymatic activity within the pathway. Our results provide a holistic understanding of the properties, functions and readouts of this oxygen-sensing mechanism defined through its role in modulating ERFVII stability.
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Affiliation(s)
- Agata Zubrycka
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Charlene Dambire
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Laura Dalle Carbonare
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
- Department of Biology, University of Oxford, OX1 3RB, Oxford, UK
| | - Gunjan Sharma
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Tinne Boeckx
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Kamal Swarup
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Craig J Sturrock
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Brian S Atkinson
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Ranjan Swarup
- School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK
| | - Françoise Corbineau
- UMR 7622 CNRS-UPMC, Biologie du développement, Institut de Biologie Paris Seine, Sorbonne Université, Paris, France
| | - Neil J Oldham
- School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, UK
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Skuse D. The benefits of digitisation of psychiatric care facilities. BJPsych Int 2023; 20:53. [PMID: 37531243 PMCID: PMC10387418 DOI: 10.1192/bji.2023.16] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2023] [Accepted: 06/08/2023] [Indexed: 08/04/2023] Open
Abstract
The potential benefits of providing digital mental healthcare to isolated rural populations are emphasised in two articles from Pakistan. Novel programmes of support have been instituted by both private and publicly funded services.
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Affiliation(s)
- David Skuse
- Professor of Behavioural and Brain Sciences, Division of Population, Policy and Practice, UCL Great Ormond Street Institute of Child Health, London, UK. Email
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Chen S, ten Tusscher KHWJ, Sasidharan R, Dekker SC, de Boer HJ. Parallels between drought and flooding: An integrated framework for plant eco-physiological responses to water stress. Plant Environ Interact 2023; 4:175-187. [PMID: 37583875 PMCID: PMC10423978 DOI: 10.1002/pei3.10117] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 06/18/2023] [Indexed: 08/17/2023]
Abstract
Drought and flooding occur at opposite ends of the soil moisture spectrum yet their resulting stress responses in plants share many similarities. Drought limits root water uptake to which plants respond with stomatal closure and reduced leaf gas exchange. Flooding limits root metabolism due to soil oxygen deficiency, which also limits root water uptake and leaf gas exchange. As drought and flooding can occur consecutively in the same system and resulting plant stress responses share similar mechanisms, a single theoretical framework that integrates plant responses over a continuum of soil water conditions from drought to flooding is attractive. Based on a review of recent literature, we integrated the main plant eco-physiological mechanisms in a single theoretical framework with a focus on plant water transport, plant oxygen dynamics, and leaf gas exchange. We used theory from the soil-plant-atmosphere continuum modeling as "backbone" for our framework, and subsequently incorporated interactions between processes that regulate plant water and oxygen status, abscisic acid and ethylene levels, and the resulting acclimation strategies in response to drought, waterlogging, and complete submergence. Our theoretical framework provides a basis for the development of mathematical models to describe plant responses to the soil moisture continuum from drought to flooding.
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Affiliation(s)
- Siluo Chen
- Computational Developmental Biology, Department of BiologyUtrecht UniversityUtrechtThe Netherlands
- Centre for Complex System StudiesUtrecht UniversityUtrechtThe Netherlands
| | | | - Rashmi Sasidharan
- Plant Stress Resilience, Institute of Environmental BiologyUtrecht UniversityUtrechtThe Netherlands
| | - Stefan C. Dekker
- Environmental Sciences, Copernicus Institute of Sustainable DevelopmentUtrecht UniversityUtrechtThe Netherlands
| | - Hugo J. de Boer
- Environmental Sciences, Copernicus Institute of Sustainable DevelopmentUtrecht UniversityUtrechtThe Netherlands
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Abstract
OBJECTIVE This paper explores compounding challenges for older coastal populations due to accelerated sea level rise at the nexus of physical hazard exposure and place-based socioeconomic and health considerations. METHODS This study applies geospatial analysis to assess the spatial distribution of older adults (age 65+) and their socioeconomic characteristics in Miami-Dade County in Florida. Next, it uses logistic regression to evaluate the socioeconomic determinants of block groups with 20% or more of residents age 65 and older at 3 feet of sea level rise compared to the other block groups in Miami-Dade. RESULTS The results show that this study area has an older population clustered in flood-prone locations along the shoreline. The block groups with more than 20% of older adults and sea level rise risk have higher homeownership and vacancy rates, a higher percentage of homes constructed before 1980, and more older individuals who live alone. CONCLUSION This study identifies place-based compounding factors undermining the ability of older residents to adequately cope with accelerated sea level rise flooding in coastal urban locations. Namely, owning an older home in a declining neighborhood and living alone can trap older individuals in place and increase their flood risk.
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Affiliation(s)
- Anamaria Bukvic
- Department of Geography, Center for Coastal Studies, Virginia Tech, Blacksburg, VA, USA
| | - Aishwarya Borate
- Department of Urban Planning and Public Policy, University of California-Irvine, Irvine, CA, USA
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Ieviņa S, Karlsons A, Osvalde A, Andersone-Ozola U, Ievinsh G. Coastal Wetland Species Rumex hydrolapathum: Tolerance against Flooding, Salinity, and Heavy Metals for Its Potential Use in Phytoremediation and Environmental Restoration Technologies. Life (Basel) 2023; 13:1604. [PMID: 37511979 PMCID: PMC10381717 DOI: 10.3390/life13071604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/13/2023] [Accepted: 07/19/2023] [Indexed: 07/30/2023] Open
Abstract
Plants with high biomass adapted to conditions of increased moisture and with significant salt tolerance appear to be particularly attractive candidates for phytoremediation studies. The aim of the present study was to examine the tolerance of Rumex hydrolapathum plants to freshwater, saltwater inundation, and soil contaminated with heavy metals, as well as its metal accumulation potential in controlled conditions. Six separate vegetation container experiments in controlled conditions were performed with R. hydrolapathum plants to study the effects of soil moisture, waterlogging with NaCl, soil Cd, soil Cr, soil Ni, and soil Pb in the form of a nitrate or acetate. Optimum plant growth occurred in waterlogged soil conditions. As the concentration of NaCl used for waterlogging increased, the mass of living leaves decreased, but that of dry leaves increased. As a result, the total biomass of leaves did not significantly change. R. hydrolapathum plants were extremely tolerant to Cd and Pb, moderately tolerant to Ni, and relatively sensitive to Cr. The plants had high capacity for metal accumulation in older and senescent leaves, especially for Na+, K+, Cd, and Ni. R. hydrolapathum plants can tolerate soil waterlogging with seawater-level salinity, which, together with the metal tolerance and potential for metal accumulation in leaves, make them excellently suited for use in a variety of wastewater treatment systems, including constructed wetlands.
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Affiliation(s)
- Silvija Ieviņa
- Department of Plant Physiology, Faculty of Biology, University of Latvia, 1 Jelgavas Str., LV-1004 Riga, Latvia
| | - Andis Karlsons
- Institute of Biology, University of Latvia, 4 Ojāra Vācieša Str., LV-1004 Riga, Latvia
| | - Anita Osvalde
- Institute of Biology, University of Latvia, 4 Ojāra Vācieša Str., LV-1004 Riga, Latvia
| | - Una Andersone-Ozola
- Department of Plant Physiology, Faculty of Biology, University of Latvia, 1 Jelgavas Str., LV-1004 Riga, Latvia
| | - Gederts Ievinsh
- Department of Plant Physiology, Faculty of Biology, University of Latvia, 1 Jelgavas Str., LV-1004 Riga, Latvia
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Fatimi AS, Anwar E, Shaikh T. The Precedent set by Unprecedented Rainfall: Lessons to be Learnt From Disastrous Flooding in Pakistan. Disaster Med Public Health Prep 2023; 17:e411. [PMID: 37317662 DOI: 10.1017/dmp.2023.79] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Pakistan has suffered heavy losses due to the torrential monsoon rains of 2022. With obliterated infrastructure and rising disease burden, the nation is still reeling from the dismal aftermath. It is critical to understand that such catastrophes are not a 1-time calamity but are likely to become more frequent with growing severity of the climate crisis. These losses point to a more systemic problem that is a lack of preparedness, and without sustainable long-term measures in place, the nation remains just as vulnerable to the next 'unpredictable' weather contingency. Prior planning and effective allocation of resources can help develop a proactive response to future disasters of this magnitude.
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Affiliation(s)
- Asad S Fatimi
- Medical College, The Aga Khan University, Karachi, Pakistan
| | - Eman Anwar
- Medical College, The Aga Khan University, Karachi, Pakistan
| | - Taha Shaikh
- Medical College, The Aga Khan University, Karachi, Pakistan
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Jardine KJ, McDowell N. Fermentation-mediated growth, signaling, and defense in plants. New Phytol 2023. [PMID: 37282715 DOI: 10.1111/nph.19015] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 03/18/2023] [Indexed: 06/08/2023]
Abstract
While traditionally considered important mainly in hypoxic roots during flooding, upregulation of fermentation pathways in plants has recently been described as an evolutionarily conserved drought survival strategy, with acetate signaling mediating reprograming of transcription and cellular carbon and energy metabolism from roots to leaves. The amount of acetate produced directly correlates with survival through potential mechanisms including defense gene activation, biosynthesis of primary and secondary metabolites, and aerobic respiration. Here, we review root ethanolic fermentation responses to hypoxia during saturated soil conditions and summarize studies highlighting acetate fermentation under aerobic conditions coupled with respiration during growth and drought responses. Recent work is discussed demonstrating long-distance transport of acetate via the transpiration stream as a respiratory substrate. While maintenance and growth respiration are often modeled separately in terrestrial models, here we propose the concept of 'Defense Respiration' fueled by acetate fermentation in which upregulation of acetate fermentation contributes acetate substrate for alternative energy production via aerobic respiration, biosynthesis of primary and secondary metabolites, and the acetylation of proteins involved in defense gene regulation. Finally, we highlight new frontiers in leaf-atmosphere emission measurements as a potential way to study acetate fermentation responses of individual leaves, branches, ecosystems, and regions.
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Affiliation(s)
- Kolby J Jardine
- Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA
- Ciências de Florestas Tropicais, National Institute for Amazon Research, Manaus, 69067, Amazonas, Brazil
| | - Nate McDowell
- Atmospheric Sciences and Global Change Division, Pacific Northwest National Lab, Richland, WA, 99354, USA
- School of Biological Sciences, Washington State University, Pullman, WA, 99164, USA
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Grace JB. Integrated analysis shows how the effects of extreme flooding events propagate through fish communities to impact amphibians. J Anim Ecol 2023; 92:1106-1109. [PMID: 37282669 DOI: 10.1111/1365-2656.13926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2023] [Accepted: 03/29/2023] [Indexed: 06/08/2023]
Abstract
Research Highlight: Davis, C. L., Walls, S. C., Barichivich, W. J., Brown, M. E., & Miller, D. A. (2022). Disentangling direct and indirect effects of extreme events on coastal wetland communities. Journal of Animal Ecology, https://doi.org/10.1111/1365-2656.13874. Catastrophic events such as floods, hurricanes, winter storms, droughts and wildfires increasingly touch our lives either directly or indirectly. These events draw our attention to the seriousness of changes in climate not only to human well-being but also to the integrity of ecological systems upon which we depend. Understanding the impacts of extreme events on ecological systems requires the ability to characterize the cascading effects of environmental changes on the environments in which organisms live and the altered biological interactions produced. This scientific ambition represents no small challenge for the study of animal communities, which are typically difficult to census as well as dynamic in time and space. Davis et al. (2022) in a recent study in the Journal of Animal Ecology examined the amphibian and fish communities found in depressional coastal wetlands to better understand how they respond to major rainfall and flooding events. Data from the U.S. Geological Survey's Amphibian Research and Monitoring Initiative provided an 8-year record of observations as well as environmental measurements. For this study, the authors integrated techniques for assessing the dynamics of animal populations with a Bayesian implementation of structural equation modelling. Using their integrated methodological approach permitted the authors to reveal the direct and indirect effects of extreme weather events on co-occurring amphibian and fish communities while accounting for observational uncertainty and temporal variation in population-level processes. Their findings indicate that the most prominent effects of flooding on the amphibian community were caused by changes in the fish community that led to increased predation and resource competition. In their conclusions, the authors emphasize the importance of understanding networks of abiotic and biotic effects if we are to predict and mitigate the influence of extreme weather events.
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Peralta Ogorek LL, Takahashi H, Nakazono M, Pedersen O. The barrier to radial oxygen loss protects roots against hydrogen sulphide intrusion and its toxic effect. New Phytol 2023; 238:1825-1837. [PMID: 36928886 DOI: 10.1111/nph.18883] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 03/06/2023] [Indexed: 05/04/2023]
Abstract
The root barrier to radial O2 loss (ROL) is a key root trait preventing O2 loss from roots to anoxic soils, thereby enabling root growth into anoxic, flooded soils. We hypothesized that the ROL barrier can also prevent intrusion of hydrogen sulphide (H2 S), a potent phytotoxin in flooded soils. Using H2 S- and O2 -sensitive microsensors, we measured the apparent permeance to H2 S of rice roots, tested whether restricted H2 S intrusion reduced its adverse effects on root respiration, and whether H2 S could induce the formation of a ROL barrier. The ROL barrier reduced apparent permeance to H2 S by almost 99%, greatly restricting H2 S intrusion. The ROL barrier acted as a shield towards H2 S; O2 consumption in roots with a ROL barrier remained unaffected at high H2 S concentration (500 μM), compared to a 67% decline in roots without a barrier. Importantly, low H2 S concentrations induced the formation of a ROL barrier. In conclusion, the ROL barrier plays a key role in protecting against H2 S intrusion, and H2 S can act as an environmental signalling molecule for the induction of the barrier. This study demonstrates the multiple functions of the suberized/lignified outer part of the rice root beyond that of restricting ROL.
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Affiliation(s)
- Lucas León Peralta Ogorek
- The Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Universitetsparken 4, 3rd Floor, Copenhagen, 2100, Denmark
| | - Hirokazu Takahashi
- Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa, Nagoya, 464-8601, Japan
| | - Mikio Nakazono
- Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa, Nagoya, 464-8601, Japan
- School of Agriculture and Environment, The University of Western Australia, Crawley, WA, 6009, Australia
| | - Ole Pedersen
- The Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Universitetsparken 4, 3rd Floor, Copenhagen, 2100, Denmark
- School of Agriculture and Environment, The University of Western Australia, Crawley, WA, 6009, Australia
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Zbinden ZD, Douglas MR, Chafin TK, Douglas ME. A community genomics approach to natural hybridization. Proc Biol Sci 2023; 290:20230768. [PMID: 37192670 DOI: 10.1098/rspb.2023.0768] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 04/26/2023] [Indexed: 05/18/2023] Open
Abstract
Hybridization is a complicated, oft-misunderstood process. Once deemed unnatural and uncommon, hybridization is now recognized as ubiquitous among species. But hybridization rates within and among communities are poorly understood despite the relevance to ecology, evolution and conservation. To clarify, we examined hybridization across 75 freshwater fish communities within the Ozarks of the North American Interior Highlands (USA) by single nucleotide polymorphism (SNP) genotyping 33 species (N = 2865 individuals; double-digest restriction site-associated DNA sequencing (ddRAD)). We found evidence of hybridization (70 putative hybrids; 2.4% of individuals) among 18 species-pairs involving 73% (24/33) of study species, with the majority being concentrated within one family (Leuciscidae/minnows; 15 species; 66 hybrids). Interspecific genetic exchange-or introgression-was evident from 24 backcrossed individuals (10/18 species-pairs). Hybrids occurred within 42 of 75 communities (56%). Four selected environmental variables (species richness, protected area extent, precipitation (May and annually)) exhibited 73-78% accuracy in predicting hybrid occurrence via random forest classification. Our community-level assessment identified hybridization as spatially widespread and environmentally dependent (albeit predominantly within one diverse, omnipresent family). Our approach provides a more holistic survey of natural hybridization by testing a wide range of species-pairs, thus contrasting with more conventional evaluations.
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Affiliation(s)
- Zachery D Zbinden
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, USA
| | - Marlis R Douglas
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, USA
| | - Tyler K Chafin
- Biomathematics and Statistics Scotland, Edinburgh, Scotland, UK
| | - Michael E Douglas
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, USA
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He W, Luo L, Xie R, Chai J, Wang H, Wang Y, Chen Q, Wu Z, Yang S, Li M, Lin Y, Zhang Y, Luo Y, Zhang Y, Tang H, Wang X. Transcriptome sequencing analyses uncover mechanisms of citrus rootstock seedlings under waterlogging stress. Front Plant Sci 2023; 14:1198930. [PMID: 37324702 PMCID: PMC10264899 DOI: 10.3389/fpls.2023.1198930] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2023] [Accepted: 05/08/2023] [Indexed: 06/17/2023]
Abstract
Citrus plants are sensitive to waterlogging, which can cause yield reduction. Their production heavily depends on the rootstock being used for grafting of scion cultivars, and the rootstock is the first organ to be affected by waterlogging stress. However, the underlying molecular mechanisms of waterlogging stress tolerance remain elusive. In this study we investigated the stress response of two waterlogging-tolerant citrus varieties (Citrus junos Sieb ex Tanaka cv. Pujiang Xiangcheng and Ziyang Xiangcheng), and one waterlogging-sensitive variety (red tangerine) at the morphological, physiological, and genetic levels in leaf and root tissues of partially submerged plants. The results showed that waterlogging stress significantly decreased the SPAD value and root length but did not obviously affect the stem length and new root numbers. The malondialdehyde (MDA) content and the enzyme activities of superoxide dismutase (SOD), guaiacol peroxidase (POD), and catalase (CAT) were enhanced in the roots. The RNA-seq analysis revealed that the differentially expressed genes (DEGs) were mainly linked to 'cutin, suberine, and wax biosynthesis', 'diterpenoid biosynthesis', and 'glycerophospholipid metabolism' in the leaves, whereas were linked to 'flavonoid biosynthesis', 'biosynthesis of secondary metabolites and metabolic pathways' in the roots. Finally, we developed a working model based on our results to elucidate the molecular basis of waterlogging-responsive in citrus. Therefore, our data obtained in this study provided valuable genetic resources that will facilitate the breeding of citrus varieties with improved waterlogging tolerance.
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Langlois BK, Beaulac L, Berry K, Anyanwu O, Simpson RB, Ismanto A, Koch M, Coughlan de Perez E, Griffin T, Naumova EN. Household Flood Severity and Migration Extent in Central Java: Analysis of the Indonesian Family Life Survey. Int J Environ Res Public Health 2023; 20:ijerph20095706. [PMID: 37174224 PMCID: PMC10178179 DOI: 10.3390/ijerph20095706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 04/12/2023] [Accepted: 04/27/2023] [Indexed: 05/15/2023]
Abstract
Central Java, Indonesia, is prone to river and coastal flooding due to climate changes and geological factors. Migration is one possible adaptation to flooding, but research is limited due to lack of longitudinal spatially granular datasets on migration and metrics to identify flood-affected households. The available literature indicates social and economic barriers may limit mobility from flood prone areas. The Indonesian Family Life Survey (IFLS) provides self-reported data on household experiences with natural disasters among 1501 Central Java households followed over two waves (2007 and 2014). We examined how the severity of flooding, defined by household-level impacts captured by the IFLS (death, injury, financial loss, or relocation of a household member), influenced the extent of household movement in Central Java using a generalized ordered logit/partial proportional odds model. Households severely impacted by floods had 75% lower odds of moving farther away compared to those that did not experience floods. The most severely impacted households may be staying within flood-affected areas in Central Java. Public health, nutrition, and economic surveys should include modules focused on household experiences, impacts, and adaptations to facilitate the study of how climate changes are impacting these outcomes.
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Affiliation(s)
- Breanne K Langlois
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
| | - Leah Beaulac
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
| | - Katherine Berry
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
| | - Oyedolapo Anyanwu
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
| | - Ryan B Simpson
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
| | - Aris Ismanto
- Department of Oceanography, Faculty of Fisheries and Marine Science, Universitas Diponegoro, Semarang 50275, Indonesia
| | - Magaly Koch
- Center for Remote Sensing, Department of Earth & Environment, Boston University, Boston, MA 02215, USA
| | - Erin Coughlan de Perez
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
- Red Cross Red Crescent Climate Centre, 2502 KC The Hague, The Netherlands
| | - Timothy Griffin
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
| | - Elena N Naumova
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA 02111, USA
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Maric A, Hartman S. The leaf sheath promotes prolonged flooding protection by giving rise to specialized adventitious roots. New Phytol 2023; 238:1337-1339. [PMID: 36905344 DOI: 10.1111/nph.18824] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Affiliation(s)
- Aida Maric
- Plant Environmental Signalling and Development, Faculty of Biology, University of Freiburg, Freiburg, 79104, Germany
- CIBSS-Centre for Integrative Biological Signalling Studies, University of Freiburg, Freiburg, 79104, Germany
| | - Sjon Hartman
- Plant Environmental Signalling and Development, Faculty of Biology, University of Freiburg, Freiburg, 79104, Germany
- CIBSS-Centre for Integrative Biological Signalling Studies, University of Freiburg, Freiburg, 79104, Germany
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Lin C, Ogorek LLP, Liu D, Pedersen O, Sauter M. A quantitative trait locus conferring flood tolerance to deepwater rice regulates the formation of two distinct types of aquatic adventitious roots. New Phytol 2023; 238:1403-1419. [PMID: 36519256 DOI: 10.1111/nph.18678] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 12/02/2022] [Indexed: 06/17/2023]
Abstract
A key trait conferring flood tolerance is the ability to grow adventitious roots as a response to submergence. The genetic traits of deepwater rice determining the development and characteristics of aquatic adventitious roots (AAR) had not been evaluated. We used near-isogenic lines introgressed to test the hypothesis that the impressive shoot elongation ability of deepwater rice linked to quantitative trait loci 1 and 12 also promote the development of AAR. The deepwater rice genotype NIL-12 possessed expanded regions at the stem nodes where numerous AAR developed as a response to submergence. Two types (AR1 and AR2) of roots with distinct timing of emergence and large differences in morphological and anatomical traits formed within 3 (AR1) to 7 (AR2) d of submergence. The mechanical impedance provided by the leaf sheath caused AR2 to emerge later promoting thicker roots, higher elongation capacity and higher desiccation tolerance. Upregulation of key genes suggests a joint contribution in activating the meristem in AAR enhancing the development of these in response to submergence. The morphological and anatomical traits suggested that AR2 is better adapted to long-term flooding than AR1. We therefore propose that AR2 in deepwater rice functions as an evolutionary defence strategy to tackle periodic submergence.
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Affiliation(s)
- Chen Lin
- Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou, 225009, China
- Plant Developmental Biology and Plant Physiology, University of Kiel, Am Botanischen Garten 5, 24118, Kiel, Germany
| | - Lucas León Peralta Ogorek
- Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Universitetsparken 4, 3rd floor, 2100, Copenhagen, Denmark
| | - Dan Liu
- Plant Developmental Biology and Plant Physiology, University of Kiel, Am Botanischen Garten 5, 24118, Kiel, Germany
| | - Ole Pedersen
- Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Universitetsparken 4, 3rd floor, 2100, Copenhagen, Denmark
- School of Agriculture and Environment, The University of Western Australia, Crawley, WA, 6009, Australia
| | - Margret Sauter
- Plant Developmental Biology and Plant Physiology, University of Kiel, Am Botanischen Garten 5, 24118, Kiel, Germany
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Sprunger CD, Lindsey A, Lightcap A. Above- and belowground linkages during extreme moisture excess: leveraging knowledge from natural ecosystems to better understand implications for row-crop agroecosystems. J Exp Bot 2023; 74:2845-2859. [PMID: 36738284 PMCID: PMC10133998 DOI: 10.1093/jxb/erad045] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 01/31/2023] [Indexed: 06/06/2023]
Abstract
Above- and belowground linkages are responsible for some of the most important ecosystem processes in unmanaged terrestrial systems including net primary production, decomposition, and carbon sequestration. Global change biology is currently altering above- and belowground interactions, reducing ecosystem services provided by natural systems. Less is known regarding how above- and belowground linkages impact climate resilience, especially in intentionally managed cropping systems. Waterlogged or flooded conditions will continue to increase across the Midwestern USA due to climate change. The objective of this paper is to explore what is currently known regarding above- and belowground linkages and how they impact biological, biochemical, and physiological processes in systems experiencing waterlogged conditions. We also identify key above- and belowground processes that are critical for climate resilience in Midwestern cropping systems by exploring various interactions that occur within unmanaged landscapes. Above- and belowground interactions that support plant growth and development, foster multi-trophic-level interactions, and stimulate balanced nutrient cycling are critical for crops experiencing waterlogged conditions. Moreover, incorporating ecological principles such as increasing plant diversity by incorporating crop rotations and adaptive management via delayed planting dates and adjustments in nutrient management will be critical for fostering climate resilience in row-crop agriculture moving forward.
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Affiliation(s)
| | - Alex Lindsey
- Department of Horticulture and Crop Science, The Ohio State University, OH, USA
| | - Ainsley Lightcap
- School of Environment and Natural Resources, The Ohio State University, OH, USA
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Nagai K, Ashikari M. Molecular mechanism of internode elongation in rice. Breed Sci 2023; 73:108-116. [PMID: 37404350 PMCID: PMC10316307 DOI: 10.1270/jsbbs.22086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 11/28/2022] [Indexed: 07/06/2023]
Abstract
Rice plants that form ventilated tissues, such as aerenchyma in the leaves, stems, and roots, allow for growth in waterlogged conditions (paddy fields), but they cannot breathe and drown in flooded environments where the whole plant body is submerged. However, deepwater rice plants grown in flood-prone areas of Southeast Asia survive in prolonged flooded environments by taking in air through an elongated stem (internode) and leaves that emerge above the water surface, even if the water level is several meters high and flooding continues for several months. Although it has been known that plant hormones, such as ethylene and gibberellins, promote internode elongation in deepwater rice plants, the genes that control rapid internode elongation during submergence have not been identified. We recently identified several genes responsible for the quantitative trait loci involved in internode elongation in deepwater rice. Identification of the the genes revealed a molecular gene network from ethylene to gibberellins in which internode elongation is promoted by novel ethylene-responsive factors and enhances gibberellin responsiveness at the internode. In addition, elucidation of the molecular mechanism of internode elongation in deepwater rice will help our understanding of the internode elongation mechanism in normal paddy rice and contribute to improving crops through the regulation of internode elongation.
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Affiliation(s)
- Keisuke Nagai
- Bioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi 464-8601, Japan
| | - Motoyuki Ashikari
- Bioscience and Biotechnology Center, Nagoya University, Furo, Chikusa, Nagoya, Aichi 464-8601, Japan
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Nakamura S, Abanokova K, Dang HAH, Takamatsu S, Pei C, Prospere D. Is Climate Change Slowing the Urban Escalator Out of Poverty? Evidence from Chile, Colombia, and Indonesia. Int J Environ Res Public Health 2023; 20:4865. [PMID: 36981774 PMCID: PMC10049100 DOI: 10.3390/ijerph20064865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 03/02/2023] [Accepted: 03/04/2023] [Indexed: 06/18/2023]
Abstract
While urbanization has great potential to facilitate poverty reduction, climate shocks represent a looming threat to such upward mobility. This paper empirically analyzes the effects of climatic risks on the function of urban agglomerations to support poor households' escape from poverty. Combining household surveys with climatic datasets, our analyses of Chile, Colombia, and Indonesia find that households in large metropolitan areas are more likely to escape from poverty, indicating better access to economic opportunities in those areas. However, climate shocks such as extreme rainfalls and high flood risks significantly reduce upward mobility, thus offsetting such benefits of urban agglomerations. The findings underscore the need to enhance resilience among the urban poor to allow them to fully utilize the benefits of urban agglomerations.
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Affiliation(s)
| | | | - Hai-Anh H. Dang
- World Bank, Washington, DC 20433, USA
- International School, Vietnam National University, Hanoi 123105, Vietnam
- Indiana University, Bloomington, IN 47405, USA
- IZA, Schaumburg-Lippe-Strasse 5-9, 53113 Bonn, Germany
| | | | - Chunchen Pei
- School of Economics and Resource Management, Beijing Normal University, Beijing 100875, China
| | - Dilou Prospere
- Osaka School of International Public Policy, Osaka University, Osaka 560-0021, Japan
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