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Chang B, Qiu X, Yang Y, Zhou W, Jin B, Wang L. Genome-wide analyses of the GbAP2 subfamily reveal the function of GbTOE1a in salt and drought stress tolerance in Ginkgo biloba. Plant Sci 2024; 342:112027. [PMID: 38354754 DOI: 10.1016/j.plantsci.2024.112027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Revised: 01/03/2024] [Accepted: 02/08/2024] [Indexed: 02/16/2024]
Abstract
The APETALA2 (AP2) transcription factors play crucial roles in plant growth and stage transition. Ginkgo biloba is an important medicinal plant renowned for the rich flavonoid content in its leaves. In this study, 18 GbAP2s were identified from the G. biloba genome and classified into three clusters. We found that the members of the euAP2 cluster, including four TOEs (GbTOE1a/1b/1c/3), exhibited a higher expression level in most samples compared to other members. Specifically, GbTOE1a may have a positive regulatory role in salt and drought stress responses. The overexpression of GbTOE1a in G. biloba calli resulted in a significant increase in the flavonoid content and upregulation of flavonoid biosynthesis genes, including PAL, 4CL, CHS, F3H, FLSs, F3'Hs, OMT, and DFRs. By contrast, the silencing of GbTOE1a in seedlings decreased the flavonoid content and the expression of flavonoid synthesizing genes. In addition, the silenced seedlings exhibited decreased antioxidant levels and a higher sensitivity to salt and drought treatments, suggesting a crucial role of GbTOE1a in G. biloba salt and drought tolerance. To the best of our knowledge, this was the first investigation into the identification and characterization of GbAP2s in G. biloba. Our results lay a foundation for further research on the regulatory role of the AP2 family in flavonoid synthesis and stress responses.
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Affiliation(s)
- Bang Chang
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
| | - Xinyu Qiu
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
| | - Yi Yang
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
| | - Wanxiang Zhou
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
| | - Biao Jin
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
| | - Li Wang
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China.
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2
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Depardieu C, Lenz P, Marion J, Nadeau S, Girardin MP, Marchand W, Bégin C, Treydte K, Gessler A, Bousquet J, Savard MM, Isabel N. Contrasting physiological strategies explain heterogeneous responses to severe drought conditions within local populations of a widespread conifer. Sci Total Environ 2024; 923:171174. [PMID: 38402972 DOI: 10.1016/j.scitotenv.2024.171174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 01/12/2024] [Accepted: 02/20/2024] [Indexed: 02/27/2024]
Abstract
Understanding how trees prioritize carbon gain at the cost of drought vulnerability under severe drought conditions is crucial for predicting which genetic groups and individuals will be resilient to future climate conditions. In this study, we investigated variations in growth, tree-ring anatomy as well as carbon and oxygen isotope ratios to assess the sensitivity and the xylem formation process in response to an episode of severe drought in 29 mature white spruce (Picea glauca [Moench] Voss) families grown in a common garden trial. During the drought episode, the majority of families displayed decreased growth and exhibited either sustained or increased intrinsic water-use efficiency (iWUE), which was largely influenced by reduced stomatal conductance as revealed by the dual carbon‑oxygen isotope approach. Different water-use strategies were detected within white spruce populations in response to drought conditions. Our results revealed intraspecific variation in the prevailing physiological mechanisms underlying drought response within and among populations of Picea glauca. The presence of different genetic groups reflecting diverse water-use strategies within this largely-distributed conifer is likely to lessen the negative effects of drought and decrease the overall forest ecosystems' sensitivity to it.
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Affiliation(s)
- Claire Depardieu
- Canada Research Chair in Forest Genomics, Institute for Systems and Integrative Biology, Université Laval, Québec, QC G1V 0A6, Canada; Forest Research Centre, Département des sciences du bois et de la forêt, Université Laval, Québec, QC G1V 0A6, Canada; Natural Ressources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Québec, QC G1V 4C7, Canada.
| | - Patrick Lenz
- Canada Research Chair in Forest Genomics, Institute for Systems and Integrative Biology, Université Laval, Québec, QC G1V 0A6, Canada; Natural Resources Canada, Canadian Forest Service, Canadian Wood Fibre Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Québec, QC G1V 4C7, Canada
| | - Joelle Marion
- Geological Survey of Canada, Natural Resources Canada, 490 rue de la Couronne, Québec, QC G1K 9A9, Canada
| | - Simon Nadeau
- Canada Research Chair in Forest Genomics, Institute for Systems and Integrative Biology, Université Laval, Québec, QC G1V 0A6, Canada; Natural Resources Canada, Canadian Forest Service, Canadian Wood Fibre Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Québec, QC G1V 4C7, Canada
| | - Martin P Girardin
- Natural Ressources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Québec, QC G1V 4C7, Canada; Centre d'étude de la forêt, Université du Québec à Montréal, C.P. 8888, Succ. Centre-ville, Montréal, QC H3C 3P8, Canada; Forest Research Institute, Université du Québec en Abitibi-Témiscamingue, 445 boul. de l'Université, Rouyn-Noranda, QC J9X 5E4, Canada
| | - William Marchand
- Natural Ressources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Québec, QC G1V 4C7, Canada; Centre d'étude de la forêt, Université du Québec à Montréal, C.P. 8888, Succ. Centre-ville, Montréal, QC H3C 3P8, Canada; Forest Research Institute, Université du Québec en Abitibi-Témiscamingue, 445 boul. de l'Université, Rouyn-Noranda, QC J9X 5E4, Canada
| | - Christian Bégin
- Geological Survey of Canada, Natural Resources Canada, 490 rue de la Couronne, Québec, QC G1K 9A9, Canada
| | - Kerstin Treydte
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Arthur Gessler
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland; Institute of Terrestrial Ecosystems, ETH Zurich, Zurich, Switzerland
| | - Jean Bousquet
- Canada Research Chair in Forest Genomics, Institute for Systems and Integrative Biology, Université Laval, Québec, QC G1V 0A6, Canada; Forest Research Centre, Département des sciences du bois et de la forêt, Université Laval, Québec, QC G1V 0A6, Canada
| | - Martine M Savard
- Geological Survey of Canada, Natural Resources Canada, 490 rue de la Couronne, Québec, QC G1K 9A9, Canada
| | - Nathalie Isabel
- Canada Research Chair in Forest Genomics, Institute for Systems and Integrative Biology, Université Laval, Québec, QC G1V 0A6, Canada; Natural Ressources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Québec, QC G1V 4C7, Canada
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Lentz MP, Graham DJ, van Vliet MTH. Drought impact on pharmaceuticals in surface waters in Europe: Case study for the Rhine and Elbe basins. Sci Total Environ 2024; 922:171186. [PMID: 38408670 DOI: 10.1016/j.scitotenv.2024.171186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 01/20/2024] [Accepted: 02/20/2024] [Indexed: 02/28/2024]
Abstract
Hydrological droughts are expected to increase in frequency and severity in many regions due to climate change. Over the last two decades, several droughts occurred in Europe, including the 2018-drought, which showed major adverse impacts for nature and different sectoral uses (e.g. irrigation, drinking water). While drought impacts on water quantity are well studied, little understanding exists on the impacts on water quality, particularly regarding pharmaceutical concentrations in surface waters. This study investigates the impact of the 2018-drought on concentrations of four selected pharmaceuticals (carbamazepine, sulfamethoxazole, diclofenac and metoprolol) in surface waters in Europe, with a major focus on the Elbe and Rhine rivers. Monitoring data were analysed for the period of 2010-2020 to estimate the spatiotemporal patterns of pharmaceuticals and assess the concentration responses in rivers during the 2018-drought compared to reference years. Our results indicate an overall deterioration in water quality, which can be attributed to the extremely low flow and higher water temperatures (∼ + 1.5 °C and + 2.0 °C in Elbe and Rhine, respectively) during the 2018-drought. Our results show an increase in the concentrations of carbamazepine, sulfamethoxazole, and metoprolol, but reduced concentrations of diclofenac during the 2018-drought. Significant increases in carbamazepine concentrations (+45 %) were observed at 3/6 monitoring stations in the upstream part of the Elbe, which was mainly attributed to less dilution of chemical loads from wastewater treatment plants under drought conditions. However, reduced diclofenac concentrations could be attributed to increased degradation processes under higher water temperatures (R2 = 0.60). Moreover, the rainfed-dominated Elbe exhibited more severe water quality deterioration than the snowmelt-dominated Rhine river, as the Elbe's reduction in dilution capacity was larger. Our findings highlight the need to account for the impacts of climate change and associated increases in droughts in water quality management plans, to improve the provision of water of good quality for ecosystems and sectoral needs.
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Affiliation(s)
- Mark P Lentz
- Department of Physical Geography, Utrecht University, P.O. Box 80.115, 3508 TC Utrecht, the Netherlands
| | - Duncan J Graham
- Department of Physical Geography, Utrecht University, P.O. Box 80.115, 3508 TC Utrecht, the Netherlands
| | - Michelle T H van Vliet
- Department of Physical Geography, Utrecht University, P.O. Box 80.115, 3508 TC Utrecht, the Netherlands.
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Bao G, Sun G, Wang J, Shi T, Xu X, Zhai L, Bian S, Li X. Soybean RVE8a confers salt and drought tolerance in Arabidopsis. Biochem Biophys Res Commun 2024; 704:149660. [PMID: 38428303 DOI: 10.1016/j.bbrc.2024.149660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/26/2024] [Accepted: 02/07/2024] [Indexed: 03/03/2024]
Abstract
Soybean is an economically important crop, which often suffers various abiotic stresses. REVEILLE (RVE) genes have been generally considered as circadian oscillators to mediate diverse developmental processes and plant response to environmental stresses. Addressing their roles is of significance for utilizing them to enhance agronomic traits in crops. However, our understanding of soybean RVEs is extremely limited. In the study, we investigated the expression patterns of soybean CCA1-like genes under salt stress using our RNA-Seq data. Subsequently, a salt stress-inducible gene, GmRVE8a, was chosen for further study. Phylogenetic analysis indicated that GmRVE8a is most closely related to Arabidopsis RVE4 and RVE8. Also, GmRVE8a showed circadian expression pattern with 24 h rhythmic period, suggesting that it might be a clock-regulated gene. Moreover, transgenic Arabidopsis lines over-expressing GmRVE8a were generated. It was observed that ectopic over-expression of GmRVE8a caused a significant delay in flowering. Further observation indicated that under salt and drought stress, transgenic seedlings were stronger than wild type. Consistently, three-week-old transgenic plants grew better than wild type under salt and drought conditions, and the MDA content in transgenic lines was significantly lower than wild type, suggesting that GmRVE8a might be a positive regulator in response to salt and drought stress. Intriguingly, Y2H assay indicated that GmRVE8a physically interacted with a drought-tolerant protein, GmNAC17. Overall, our findings provided preliminary information regarding the functional roles of GmRVE8a in response to salt and drought stress.
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Affiliation(s)
- Guohua Bao
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China
| | - Guoqing Sun
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China
| | - Jingying Wang
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China
| | - Tianran Shi
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China
| | - Xiao Xu
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China
| | - Lulu Zhai
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China
| | - Shaomin Bian
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China.
| | - Xuyan Li
- College of Plant Science, Jilin University, Changchun, 130062, Jilin, China.
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Hernández-López JA, Andrade HJ, Barrios M. Agricultural drought assessment in dry zones of Tolima, Colombia, using an approach based on water balance and vegetation water stress. Sci Total Environ 2024; 921:171144. [PMID: 38401721 DOI: 10.1016/j.scitotenv.2024.171144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 02/17/2024] [Accepted: 02/19/2024] [Indexed: 02/26/2024]
Abstract
Soil water balance is an essential element to consider for the management of droughts and agricultural land use. It is important to evaluate the water consumption of a crop in each of its phenological phases and the status of water reserves during critical hydrologic periods. This study developed an agricultural drought index (Standardized Soil Moisture Deficit Index - SMODI) conceptualized with a water balance model considering the vegetation stress caused by soil moisture deficit. This contribution was based on meteorological information, soil moisture from satellite images, hydrophysical properties of the soil and crop evapotranspiration. Information from 61 weather stations located in the dry zone of Tolima was used for estimating the water balance. SMODI was compared with the most common drought indexes: Standardized Precipitation - Evapotranspiration Index (SPEI), the Palmer Self-Calibrated Drought Index (scPDSI), and other eleven macroclimatic indexes. Pearson's correlation coefficients (r), Tukey's test, and analysis of variance were applied to analyze the degree of association between SMODI and the contrasting indexes on a quarterly basis. SMODI considers factors influencing soil moisture distribution and retention and the water stress thresholds that plants have evolved to withstand during drought periods. Consequently, this integrated approach enhances the assessment of agricultural drought by relying on pertinent physical processes. SMODI identified extremely dry, severe, moderate and normal drought 5 %, 3 %, 20 % and 72 % respectively conditions in areas characterized by Entisols, Inceptisols, and Andisols, where rice and fruit crops and pasturelands are cultivated. The SMODI has a good correlation with macroclimatic indexes (0.70 < r < 0.74).
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Affiliation(s)
- Jorge Armando Hernández-López
- Civil Engineering Program, Engineering Faculty, Universidad de Ibagué, Carrera 22 calle 67 B/Ambalá, 730001 Ibagué, Colombia.
| | - Hernán J Andrade
- Research Group of Eco-Friendly Production of Tropical Crops "PROECUT", Facultad de Ingeniería Agronómica, Universidad del Tolima, Ibagué, Tolima 730006299, Colombia; Department of Production and Plant Health, Agronomic Engineering Faculty, Universidad del Tolima, Ibagué, Tolima 730006299, Colombia
| | - Miguel Barrios
- Faculty of Forest Engineering, Universidad del Tolima, Colombia
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Tchonkouang RD, Onyeaka H, Nkoutchou H. Assessing the vulnerability of food supply chains to climate change-induced disruptions. Sci Total Environ 2024; 920:171047. [PMID: 38373458 DOI: 10.1016/j.scitotenv.2024.171047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 01/19/2024] [Accepted: 02/15/2024] [Indexed: 02/21/2024]
Abstract
Climate change is one of the most significant challenges worldwide. There is strong evidence from research that climate change will impact several food chain-related elements such as agricultural output, incomes, prices, food access, food quality, and food safety. This scoping review seeks to outline the state of knowledge of the food supply chain's vulnerability to climate change and to identify existing literature that may guide future research, policy, and decision-making aimed at enhancing the resilience of the food supply chain. A total of 1526 publications were identified using the SCOPUS database, of which 67 were selected for the present study. The vulnerability assessment methods as well as the adaptation and resilience measures that have been employed to alleviate the impact of climate change in the food supply chain were discussed. The results revealed a growing number of publications providing evidence of the weakening of the food supply chain due to climate change and extreme weather events. Our assessment demonstrated the need to broaden research into the entire food supply chain and various forms of climatic variability because most studies have concentrated on the relationships between climatic fluctuations (especially extreme rainfall, temperatures, and drought) and production. A lack of knowledge about the effects of climate change on the food supply chain and the underlying socio-economic consequences could result in underperformance or failure of the food supply chain.
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Affiliation(s)
- Rose Daphnee Tchonkouang
- MED-Mediterranean Institute for Agriculture, Environment and Development & Change-Global Change and Sustainability Institute, Faculty of Sciences and Technology, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
| | - Helen Onyeaka
- School of Chemical Engineering, University of Birmingham, Edgbaston, Birmingham B15 2TT, United Kingdom.
| | - Hugue Nkoutchou
- Public Policy in Africa Initiative (PPiAI), Douala, Cameroon
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Tonet V, Brodribb T, Bourbia I. Variation in xylem vulnerability to cavitation shapes the photosynthetic legacy of drought. Plant Cell Environ 2024; 47:1160-1170. [PMID: 38108586 DOI: 10.1111/pce.14788] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 11/08/2023] [Accepted: 12/01/2023] [Indexed: 12/19/2023]
Abstract
Increased drought conditions impact tree health, negatively disrupting plant water transport which, in turn, affects plant growth and survival. Persistent drought legacy effects have been documented in many diverse ecosystems, yet we still lack a mechanistic understanding of the physiological processes limiting tree recovery after drought. Tackling this question, we exposed saplings of a common Australian evergreen tree (Eucalyptus viminalis) to a cycle of drought and rewatering, seeking evidence for a link between the spread of xylem cavitation within the crown and the degree of photosynthetic recovery postdrought. Individual leaves experiencing >35% vein cavitation quickly died but this did not translate to a rapid overall canopy damage. Rather, whole canopies showed a gradual decline in mean postdrought gas exchange rates as water stress increased. This gradual loss of canopy function postdrought was due to a significant variation in cavitation vulnerability of leaves within canopies leading to diversity in the capacity of leaves within a single crown to recover function after drought. These results from the evergreen E. viminalis emphasise the importance of within-crown variation in xylem vulnerability as a central character regulating the dynamics of canopy death and the severity of drought legacy through time.
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Affiliation(s)
- Vanessa Tonet
- Discipline of Biological Sciences, School of Natural Sciences, University of Tasmania, Hobart, Australia
- School of Forestry & Environmental Studies, Yale University, New Haven, Connecticut, USA
| | - Timothy Brodribb
- Discipline of Biological Sciences, School of Natural Sciences, University of Tasmania, Hobart, Australia
| | - Ibrahim Bourbia
- Discipline of Biological Sciences, School of Natural Sciences, University of Tasmania, Hobart, Australia
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Zimmerbeutel A, Diekötter T, Reck H, Nissen H, Wiedmann LJ, Donath TW. Effects of litter amount and seed sowing position on seedling emergence and growth of hemiparasitic Rhinanthus species under drought stress. Plant Biol (Stuttg) 2024; 26:437-445. [PMID: 38430522 DOI: 10.1111/plb.13633] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Accepted: 01/24/2024] [Indexed: 03/04/2024]
Abstract
Roadside vegetation in Central Europe is mostly species-poor and dominated by a few grass species. Hemiparasitic plant species, including Rhinanthus spp., might effectively restrict grass growth, thereby making space for light-dependent herb species. Despite the significance of abiotic site conditions for plant establishment in general, their effects on Rhinanthus establishment are less well known. We investigated combined effects of water availability, litter amount and seed position within litter on Rhinanthus seedling emergence and growth. Two parallel greenhouse experiments were conducted with R. angustifolius and R. minor. In these, we tested the impact of 200 or 400 g litter·m-2 with seeds sown beneath or on top of a litter layer under constantly humid or intermittently dry conditions on seedling emergence and biomass production of Rhinanthus. Presence of litter positively affected Rhinanthus seedling emergence when sown beneath the litter layer and reduced negative effects of water deficiency. Sowing beneath a litter layer increased seedling emergence by 157%, with similar effects at 200 and 400 g litter·m-2. Water level did not affect biomass production. Compared to R. minor, R. angustifolius had higher mean biomass, and its seedlings emerged earlier and in higher numbers. Our results indicate that Rhinanthus spp. react similarly to litter as non-hemiparasitic plant species from temperate grasslands. Litter presence positively influenced Rhinanthus seedling emergence and growth under intermittently dry conditions. Its hemiparasitic characteristics might reduce drought impacts on biomass production. To ensure seed contact with the soil surface, seeds should be sown when no litter is present, or mulching should occur post-sowing.
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Affiliation(s)
- A Zimmerbeutel
- Department of Landscape Ecology, Institute of Natural Resource Conservation, Kiel University, Kiel, Germany
| | - T Diekötter
- Department of Landscape Ecology, Institute of Natural Resource Conservation, Kiel University, Kiel, Germany
| | - H Reck
- Department of Landscape Ecology, Institute of Natural Resource Conservation, Kiel University, Kiel, Germany
| | - H Nissen
- Department of Landscape Ecology, Institute of Natural Resource Conservation, Kiel University, Kiel, Germany
| | - L J Wiedmann
- Department of Landscape Ecology, Institute of Natural Resource Conservation, Kiel University, Kiel, Germany
| | - T W Donath
- Department of Landscape Ecology, Institute of Natural Resource Conservation, Kiel University, Kiel, Germany
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Steiner FA, Wild AJ, Tyborski N, Tung SY, Koehler T, Buegger F, Carminati A, Eder B, Groth J, Hesse BD, Pausch J, Lüders T, Vahl WK, Wolfrum S, Mueller CW, Vidal A. Rhizosheath drought responsiveness is variety-specific and a key component of belowground plant adaptation. New Phytol 2024; 242:479-492. [PMID: 38418430 DOI: 10.1111/nph.19638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Accepted: 02/02/2024] [Indexed: 03/01/2024]
Abstract
Biophysicochemical rhizosheath properties play a vital role in plant drought adaptation. However, their integration into the framework of plant drought response is hampered by incomplete mechanistic understanding of their drought responsiveness and unknown linkage to intraspecific plant-soil drought reactions. Thirty-eight Zea mays varieties were grown under well-watered and drought conditions to assess the drought responsiveness of rhizosheath properties, such as soil aggregation, rhizosheath mass, net-rhizodeposition, and soil organic carbon distribution. Additionally, explanatory traits, including functional plant trait adaptations and changes in soil enzyme activities, were measured. Drought restricted soil structure formation in the rhizosheath and shifted plant-carbon from litter-derived organic matter in macroaggregates to microbially processed compounds in microaggregates. Variety-specific functional trait modifications determined variations in rhizosheath drought responsiveness. Drought responses of the plant-soil system ranged among varieties from maintaining plant-microbial interactions in the rhizosheath through accumulation of rhizodeposits, to preserving rhizosheath soil structure while increasing soil exploration through enhanced root elongation. Drought-induced alterations at the root-soil interface may hold crucial implications for ecosystem resilience in a changing climate. Our findings highlight that rhizosheath soil properties are an intrinsic component of plant drought response, emphasizing the need for a holistic concept of plant-soil systems in future research on plant drought adaptation.
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Affiliation(s)
- Franziska A Steiner
- Soil Science, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
| | - Andreas J Wild
- Agroecology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, 95447, Bayreuth, Germany
| | - Nicolas Tyborski
- Ecological Microbiology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, 95448, Bayreuth, Germany
| | - Shu-Yin Tung
- Soil Science, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
- Institute for Agroecology and Organic Farming, Bavarian State Research Center for Agriculture, 85354, Freising, Germany
| | - Tina Koehler
- Root-Soil Interaction, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
| | - Franz Buegger
- Research Unit Environmental Simulation, Helmholtz Zentrum München (GmbH), German Research Center for Environmental Health, 85764, Neuherberg, Germany
| | - Andrea Carminati
- Physics of Soils and Terrestrial Ecosystems, Department of Environmental Systems Science, ETH Zurich, 8092, Zurich, Switzerland
| | - Barbara Eder
- Institute for Crop Science and Plant Breeding, Bavarian State Research Center for Agriculture, 85354, Freising, Germany
| | - Jennifer Groth
- Institute for Crop Science and Plant Breeding, Bavarian State Research Center for Agriculture, 85354, Freising, Germany
| | - Benjamin D Hesse
- Chair of Land Surface-Atmosphere Interactions, TUM School of Life Sciences, Technical University of Munich, 85354, Freising, Germany
- Department of Integrative Biology and Biodiversity Research, Institute of Botany, University of Natural Resources and Life Sciences, 1180, Vienna, Austria
| | - Johanna Pausch
- Agroecology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, 95447, Bayreuth, Germany
| | - Tillmann Lüders
- Ecological Microbiology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, 95448, Bayreuth, Germany
| | - Wouter K Vahl
- Institute for Crop Science and Plant Breeding, Bavarian State Research Center for Agriculture, 85354, Freising, Germany
| | - Sebastian Wolfrum
- Institute for Agroecology and Organic Farming, Bavarian State Research Center for Agriculture, 85354, Freising, Germany
| | - Carsten W Mueller
- Chair of Soil Science, Institute of Ecology, Technische Universität Berlin, 10587, Berlin, Germany
- Department for Geoscience and Natural Resource Management, University of Copenhagen, 1350, Copenhagen, Denmark
| | - Alix Vidal
- Soil Biology Group, Department of Environmental Sciences, Wageningen University, 6700, Wageningen, the Netherlands
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Al Moteri M, Alrowais F, Mtouaa W, Aljehane NO, Alotaibi SS, Marzouk R, Mustafa Hilal A, Ahmed NA. An enhanced drought forecasting in coastal arid regions using deep learning approach with evaporation index. Environ Res 2024; 246:118171. [PMID: 38215925 DOI: 10.1016/j.envres.2024.118171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 11/14/2023] [Accepted: 01/09/2024] [Indexed: 01/14/2024]
Abstract
Coastal arid regions are similar to deserts, where it receives significantly less rainfall, less than 10 cm. Perhaps the world's worst natural disaster, coastal area droughts, can only be detected using reliable monitoring systems. Creating a reliable drought forecast model and figuring out how well various models can analyze drought factors in coastal arid regions are two of the biggest obstacles in this field. Different time-series methods and machine-learning models have traditionally been utilized in forecasting strategies. Deep learning is promising when describing the complex interplay between coastal drought and its contributing variables. Considering the possibility of enhancing our understanding of drought features, applying deep learning approaches has yet to be tried widely. The current investigation employs a deep learning strategy. Coastal Drought indices are commonly used to comprehend the situation better; hence the Standard Precipitation Evaporation Index (SPEI) was used since it incorporates temperatures and precipitation into its computation. An integrated coastal drought monitoring model was presented and validated using convolutional long short-term memory with self-attention (SA-CLSTM). The Climatic Research Unit (CRU) dataset, which spans 1901-2018, was mined for the drought index and predictor data. To learn how LSTM forecasting could enhance drought forecasting, we analyzed the findings regarding numerous drought parameters (drought severity, drought category, or geographic variation). The model's ability to predict drought intensity was assessed using the Coefficient of Determination (R2), the Root Mean Square Error (RMSE), and the Mean Absolute Error (MAE). Both the SPEI 1 and SPEI 3 examples had R2 values more than 0.99 for the model. The range of predicted outcomes for each drought group was analyzed using a multi-class Receiver Operating Characteristic based Area under Curves (ROC-AUC) method. The research showed that the AUC for SPEI 1 was 0.99 and for SPEI 3, 0.99. The study's results indicate progress over machine learning models for one month in advance, accounting for various drought conditions. This work's findings may be used to mitigate drought, and additional improvement can be achieved by testing other models.
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Affiliation(s)
- Moteeb Al Moteri
- Department of Management Information System, College of Business, King Saud University, P. O Box 28095, Riyadh, 11437, Saudi Arabia
| | - Fadwa Alrowais
- Department of Computer Sciences, College of Computer and Information Sciences, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, Riyadh, 11671, Saudi Arabia
| | - Wafa Mtouaa
- Department of Mathematics, Faculty of Sciences and Arts, King Khalid University, Muhayil Asir, Saudi Arabia
| | - Nojood O Aljehane
- Department of Computer Science, Faculty of Computers and Information Technology, University of Tabuk, Tabuk, Saudi Arabia
| | - Saud S Alotaibi
- Department of Information Systems, College of Computing and Information System, Umm Al-Qura University, Saudi Arabia
| | - Radwa Marzouk
- Department of Information Systems, College of Computer and Information Sciences, Princess Nourah Bint Abdulrahman University, P.O. Box 84428, Riyadh, 11671, Saudi Arabia
| | - Anwer Mustafa Hilal
- Department of Computer and Self Development, Preparatory Year Deanship, Prince Sattam Bin Abdulaziz University, AlKharj, Saudi Arabia.
| | - Noura Abdelaziz Ahmed
- Department of Computer and Self Development, Preparatory Year Deanship, Prince Sattam Bin Abdulaziz University, AlKharj, Saudi Arabia
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11
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Guadarrama-Escobar LM, Hunt J, Gurung A, Zarco-Tejada PJ, Shabala S, Camino C, Hernandez P, Pourkheirandish M. Back to the future for drought tolerance. New Phytol 2024; 242:372-383. [PMID: 38429882 DOI: 10.1111/nph.19619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 01/22/2024] [Indexed: 03/03/2024]
Abstract
Global agriculture faces increasing pressure to produce more food with fewer resources. Drought, exacerbated by climate change, is a major agricultural constraint costing the industry an estimated US$80 billion per year in lost production. Wild relatives of domesticated crops, including wheat (Triticum spp.) and barley (Hordeum vulgare L.), are an underutilized source of drought tolerance genes. However, managing their undesirable characteristics, assessing drought responses, and selecting lines with heritable traits remains a significant challenge. Here, we propose a novel strategy of using multi-trait selection criteria based on high-throughput spectral images to facilitate the assessment and selection challenge. The importance of measuring plant capacity for sustained carbon fixation under drought stress is explored, and an image-based transpiration efficiency (iTE) index obtained via a combination of hyperspectral and thermal imaging, is proposed. Incorporating iTE along with other drought-related variables in selection criteria will allow the identification of accessions with diverse tolerance mechanisms. A comprehensive approach that merges high-throughput phenotyping and de novo domestication is proposed for developing drought-tolerant prebreeding material and providing breeders with access to gene pools containing unexplored drought tolerance mechanisms.
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Affiliation(s)
- Luis M Guadarrama-Escobar
- School of Agriculture, Food and Ecosystem Sciences (SAFES), University of Melbourne, Melbourne, Vic., 3010, Australia
| | - James Hunt
- School of Agriculture, Food and Ecosystem Sciences (SAFES), University of Melbourne, Melbourne, Vic., 3010, Australia
| | - Allison Gurung
- School of Agriculture, Food and Ecosystem Sciences (SAFES), University of Melbourne, Melbourne, Vic., 3010, Australia
| | - Pablo J Zarco-Tejada
- School of Agriculture, Food and Ecosystem Sciences (SAFES), University of Melbourne, Melbourne, Vic., 3010, Australia
- Department of Infrastructure Engineering (IE), Faculty of Engineering and Information Technology (FEIT), University of Melbourne, Melbourne, Vic., 3010, Australia
- Institute for Sustainable Agriculture (IAS), Spanish Council for Scientific Research (CSIC), Cordoba, 14004, Spain
| | - Sergey Shabala
- School of Biological Sciences, University of Western Australia, Perth, WA, 6009, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528000, China
| | - Carlos Camino
- Joint Research Centre (JRC), European Commission (EC), Ispra, 21027, Italy
| | - Pilar Hernandez
- Institute for Sustainable Agriculture (IAS), Spanish Council for Scientific Research (CSIC), Cordoba, 14004, Spain
| | - Mohammad Pourkheirandish
- School of Agriculture, Food and Ecosystem Sciences (SAFES), University of Melbourne, Melbourne, Vic., 3010, Australia
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12
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Hu J, Luo M, Zhou X, Wang Z, Yan L, Hong D, Yang G, Zhang X. RING-type E3 ligase BnaJUL1 ubiquitinates and degrades BnaTBCC1 to regulate drought tolerance in Brassica napus L. Plant Cell Environ 2024; 47:1023-1040. [PMID: 37984059 DOI: 10.1111/pce.14770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 08/26/2023] [Accepted: 09/27/2023] [Indexed: 11/22/2023]
Abstract
Drought stress poses a persistent threat to field crops and significantly limits global agricultural productivity. Plants employ ubiquitin-dependent degradation as a crucial post-translational regulatory mechanism to swiftly adapt to changing environmental conditions. JUL1 is a RING-type E3 ligase related to drought stress in Arabidopsis. In this study, we explored the function of BnaJUL1 (a homologous gene of JUL1 in Brassica napus) and discovered a novel gene BnaTBCC1 participating in drought tolerance. First, we utilised BnaJUL1-cri materials through the clustered regularly interspaced short palindromic repeats (CRISPR)-CRISPR-associated protein 9 system. Second, we confirmed that BnaJUL1 regulated drought tolerance through the drought tolerance assay and transcriptome analysis. Then, we identified a series of proteins interacting with BnaJUL1 through yeast library screening, including BnaTBCC1 (a tubulin binding cofactor C domain-containing protein); whose homologous gene TBCC1 knockdown mutants (tbcc1-1) exhibited ABA-sensitive germination in Arabidopsis, we then confirmed the involvement of BnaTBCC1 in drought tolerance in both Arabidopsis and Brassica. Finally, we established that BnaJUL1 could ubiquitinate and degrade BnaTBCC1 to regulate drought tolerance. Consequently, our study unveils BnaJUL1 as a novel regulator that ubiquitinates and degrades BnaTBCC1 to modulate drought tolerance and provided desirable germplasm for further breeding of drought tolerance in rapeseed.
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Affiliation(s)
- Jin Hu
- Hainan Yazhou Bay Seed Laboratory, Sanya Nanfan Research Institute of Hainan University, Sanya, China
- College of Tropical Crops, Hainan University, Haikou, China
| | - Mudan Luo
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Xianming Zhou
- Hainan Yazhou Bay Seed Laboratory, Sanya Nanfan Research Institute of Hainan University, Sanya, China
- College of Tropical Crops, Hainan University, Haikou, China
| | - Zhaoyang Wang
- Hainan Yazhou Bay Seed Laboratory, Sanya Nanfan Research Institute of Hainan University, Sanya, China
- College of Tropical Crops, Hainan University, Haikou, China
| | - Li Yan
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Dengfeng Hong
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Guangsheng Yang
- Hainan Yazhou Bay Seed Laboratory, Sanya Nanfan Research Institute of Hainan University, Sanya, China
- College of Tropical Crops, Hainan University, Haikou, China
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China
| | - Xiaohui Zhang
- Hainan Yazhou Bay Seed Laboratory, Sanya Nanfan Research Institute of Hainan University, Sanya, China
- College of Tropical Crops, Hainan University, Haikou, China
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13
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Aguirre NM, Ochoa ME, Holmlund HI, Palmeri GN, Lancaster ER, Gilderman GS, Taylor SR, Sauer KE, Borges AJ, Lamb AND, Jacques SB, Ewers FW, Davis SD. How megadrought causes extensive mortality in a deep-rooted shrub species normally resistant to drought-induced dieback: The role of a biotic mortality agent. Plant Cell Environ 2024; 47:1053-1069. [PMID: 38017668 DOI: 10.1111/pce.14768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Revised: 10/21/2023] [Accepted: 11/03/2023] [Indexed: 11/30/2023]
Abstract
Southern California experienced unprecedented megadrought between 2012 and 2018. During this time, Malosma laurina, a chaparral species normally resilient to single-year intense drought, developed extensive mortality exceeding 60% throughout low-elevation coastal populations of the Santa Monica Mountains. We assessed the physiological mechanisms by which the advent of megadrought predisposed M. laurina to extensive shoot dieback and whole-plant death. We found that hydraulic conductance of stem xylem (Ks, native ) was reduced seven to 11-fold in dieback adult and resprout branches, respectively. Staining of stem xylem vessels revealed that dieback plants experienced 68% solid-blockage, explaining the reduction in water transport. Following Koch's postulates, persistent isolation of a microorganism in stem xylem of dieback plants but not healthy controls indicated that the causative agent of xylem blockage was an opportunistic endophytic fungus, Botryosphaeria dothidea. We inoculated healthy M. laurina saplings with fungal isolates and compared hyphal elongation rates under well-watered, water-deficit, and carbon-deficit treatments. Relative to controls, we found that both water deficit and carbon-deficit increased hyphal extension rates and the incidence of shoot dieback.
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Affiliation(s)
- Natalie M Aguirre
- Ecology and Evolutionary Biology Program, Texas A&M University, College Station, Texas, USA
- Natural Science Division, Pepperdine University, Malibu, California, USA
| | - Marissa E Ochoa
- Natural Science Division, Pepperdine University, Malibu, California, USA
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, California, USA
| | - Helen I Holmlund
- Natural Science Division, Pepperdine University, Malibu, California, USA
| | | | - Emily R Lancaster
- Natural Science Division, Pepperdine University, Malibu, California, USA
- School of Marine Sciences, University of Maine, Orono, Maine, USA
| | - Gina S Gilderman
- Natural Science Division, Pepperdine University, Malibu, California, USA
| | - Shaquetta R Taylor
- Natural Science Division, Pepperdine University, Malibu, California, USA
| | - Kaitlyn E Sauer
- Natural Science Division, Pepperdine University, Malibu, California, USA
| | - Adriana J Borges
- Natural Science Division, Pepperdine University, Malibu, California, USA
| | - Avery N D Lamb
- Natural Science Division, Pepperdine University, Malibu, California, USA
- Nicholas School of the Environment, The Divinity School, Duke University, Durham, North Carolina, USA
| | - Sarah B Jacques
- Natural Science Division, Pepperdine University, Malibu, California, USA
- Department of Surgery, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA
| | - Frank W Ewers
- Department of Biological Sciences, California State Polytechnic University, Pomona, California, USA
| | - Stephen D Davis
- Natural Science Division, Pepperdine University, Malibu, California, USA
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14
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Wei J, von Arx G, Fan Z, Ibrom A, Mund M, Knohl A, Peters RL, Babst F. Drought alters aboveground biomass production efficiency: Insights from two European beech forests. Sci Total Environ 2024; 919:170726. [PMID: 38331275 DOI: 10.1016/j.scitotenv.2024.170726] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Revised: 02/03/2024] [Accepted: 02/03/2024] [Indexed: 02/10/2024]
Abstract
The fraction of photosynthetically assimilated carbon that trees allocate to long-lasting woody biomass pools (biomass production efficiency - BPE), is a key metric of the forest carbon balance. Its apparent simplicity belies the complex interplay between underlying processes of photosynthesis, respiration, litter and fruit production, and tree growth that respond differently to climate variability. Whereas the magnitude of BPE has been routinely quantified in ecological studies, its temporal dynamics and responses to extreme events such as drought remain less well understood. Here, we combine long-term records of aboveground carbon increment (ACI) obtained from tree rings with stand-level gross primary productivity (GPP) from eddy covariance (EC) records to empirically quantify aboveground BPE (= ACI/GPP) and its interannual variability in two European beech forests (Hainich, DE-Hai, Germany; Sorø, DK-Sor, Denmark). We found significant negative correlations between BPE and a daily-resolved drought index at both sites, indicating that woody growth is de-prioritized under water limitation. During identified extreme years, early-season drought reduced same-year BPE by 29 % (Hainich, 2011), 31 % (Sorø, 2006), and 14 % (Sorø, 2013). By contrast, the 2003 late-summer drought resulted in a 17 % reduction of post-drought year BPE at Hainich. Across the entire EC period, the daily-to-seasonal drought response of BPE resembled that of ACI, rather than that of GPP. This indicates that BPE follows sink dynamics more closely than source dynamics, which appear to be decoupled given the distinctive climate response patterns of GPP and ACI. Based on our observations, we caution against estimating the magnitude and variability of the carbon sink in European beech (and likely other temperate forests) based on carbon fluxes alone. We also encourage comparable studies at other long-term EC measurement sites from different ecosystems to further constrain the BPE response to rare climatic events.
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Affiliation(s)
- Jingshu Wei
- School of Natural Resources and the Environment, University of Arizona, 1064 E Lowell Street, Tucson, AZ 85721, USA; Swiss Federal Institute for Forest Snow and Landscape Research WSL, Zuercherstrasse 111, CH-8903 Birmensdorf, Switzerland; CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun Town, Mengla County, Yunnan Province 666303, China.
| | - Georg von Arx
- Swiss Federal Institute for Forest Snow and Landscape Research WSL, Zuercherstrasse 111, CH-8903 Birmensdorf, Switzerland; Oeschger Centre for Climate Change Research, University of Bern, Hochschulstrasse 4, CH-3012 Bern, Switzerland
| | - Zexin Fan
- CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun Town, Mengla County, Yunnan Province 666303, China
| | - Andreas Ibrom
- Biosystems Division, Risø National Laboratory for Sustainable Energy, Technical University of Denmark, Denmark
| | - Martina Mund
- Forestry Research and Competence Centre Gotha, Jägerstraße1, D-99867 Gotha, Germany
| | - Alexander Knohl
- Bioclimatology, University of Göttingen, Büsgenweg 2, D-37077 Göttingen, Germany
| | - Richard L Peters
- Environmental Sciences - Botany, University of Basel, Schönbeinstrasse 6, Basel CH-4056, Switzerland
| | - Flurin Babst
- School of Natural Resources and the Environment, University of Arizona, 1064 E Lowell Street, Tucson, AZ 85721, USA; Laboratory of Tree-Ring Research, University of Arizona, 1215 E Lowell Street, Tucson, AZ 85721, USA
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15
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Meng Y, Lv Q, Li L, Wang B, Chen L, Yang W, Lei Y, Xie Y, Li X. E3 ubiquitin ligase TaSDIR1-4A activates membrane-bound transcription factor TaWRKY29 to positively regulate drought resistance. Plant Biotechnol J 2024; 22:987-1000. [PMID: 38018512 PMCID: PMC10955488 DOI: 10.1111/pbi.14240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Revised: 10/30/2023] [Accepted: 11/04/2023] [Indexed: 11/30/2023]
Abstract
Drought is a deleterious abiotic stress factor that constrains crop growth and development. Post-translational modification of proteins mediated by the ubiquitin-proteasome system is an effective strategy for directing plant responses to stress, but the regulatory mechanisms in wheat remain unclear. In this study, we showed that TaSDIR1-4A is a positive modulator of the drought response. Overexpression of TaSDIR1-4A increased the hypersensitivity of stomata, root length and endogenous abscisic acid (ABA) content under drought conditions. TaSDIR1-4A encodes a C3H2C3-type RING finger protein with E3 ligase activity. Amino acid mutation in its conserved domain led to loss of activity and altered the subcellular localization. The membrane-bound transcription factor TaWRKY29 was identified by yeast two-hybrid screening, and it was confirmed as interacting with TaSDIR1-4A both in vivo and in vitro. TaSDIR1-4A mediated the polyubiquitination and proteolysis of the C-terminal amino acid of TaWRKY29, and its translocation from the plasma membrane to the nucleus. Activated TaWRKY29 bound to the TaABI5 promoter to stimulate its expression, thereby positively regulating the ABA signalling pathway and drought response. Our findings demonstrate the positive role of TaSDIR1-4A in drought tolerance and provide new insights into the involvement of UPS in the wheat stress response.
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Affiliation(s)
- Ying Meng
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Qian Lv
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Liqun Li
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Bingxin Wang
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Liuping Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Weibing Yang
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Yanhong Lei
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Yanzhou Xie
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
| | - Xuejun Li
- State Key Laboratory of Crop Stress Biology in Arid Areas and College of AgronomyNorthwest A&F UniversityYanglingChina
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16
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Andriantelomanana T, Améglio T, Delzon S, Cochard H, Herbette S. Unpacking the point of no return under drought in poplar: insight from stem diameter variation. New Phytol 2024; 242:466-478. [PMID: 38406847 DOI: 10.1111/nph.19615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 02/02/2024] [Indexed: 02/27/2024]
Abstract
A specific, robust threshold for drought-induced tree mortality is needed to improve the prediction of forest dieback. Here, we tested the relevance of continuous measurements of stem diameter variations for identifying such a threshold, their relationship with hydraulic and cellular damage mechanisms, and the influence of growth conditions on these relationships. Poplar saplings were grown under well-watered, water-limited, or light-limited conditions and then submitted to a drought followed by rewatering. Stem diameter was continuously measured to investigate two parameters: the percentage loss of diameter (PLD) and the percentage of diameter recovery (DR) following rewatering. Water potentials, stomatal conductance, embolism, and electrolyte leakage were also measured, and light microscopy allowed investigating cell collapse induced by drought. The water release observed through loss of diameter occurred throughout the drought, regardless of growth conditions. Poplars did not recover from drought when PLD reached a threshold and this differed according to growth conditions but remained linked to cell resistance to damage and collapse. Our findings shed new light on the mechanisms of drought-induced tree mortality and indicate that PLD could be a relevant indicator of drought-induced tree mortality, regardless of the growth conditions.
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Affiliation(s)
| | - Thierry Améglio
- Université Clermont Auvergne, INRAE, PIAF, Clermont-Ferrand, 63000, France
| | - Sylvain Delzon
- Université Bordeaux, INRAE, BIOGECO, Pessac, 33615, France
| | - Hervé Cochard
- Université Clermont Auvergne, INRAE, PIAF, Clermont-Ferrand, 63000, France
| | - Stephane Herbette
- Université Clermont Auvergne, INRAE, PIAF, Clermont-Ferrand, 63000, France
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17
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Usher K, Rice K, Williams J. Editorial for IJMHN: An application of the 'one health' approach for extreme weather events and mental health: Can the adoption of a 'one health' approach better prepare us for the predicted drought in parts of rural Australia? Int J Ment Health Nurs 2024; 33:220-223. [PMID: 38379354 DOI: 10.1111/inm.13310] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Accepted: 02/08/2024] [Indexed: 02/22/2024]
Affiliation(s)
- Kim Usher
- Faculty of Medicine and Health, University of New England, Armidale, New South Wales, Australia
- New England Virtual Health Network (NEViHN), Armidale, New South Wales, Australia
| | - Kylie Rice
- Faculty of Medicine and Health, University of New England, Armidale, New South Wales, Australia
- New England Virtual Health Network (NEViHN), Armidale, New South Wales, Australia
| | - Jen Williams
- Faculty of Medicine and Health, University of New England, Armidale, New South Wales, Australia
- New England Virtual Health Network (NEViHN), Armidale, New South Wales, Australia
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18
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Knapp PA, Soulé PT, Mitchell TJ, Catherwood AA, Lewis HS. Increasing radial growth in old-growth high-elevation conifers in Southern California, USA, during the exceptional "hot drought" of 2000-2020. Int J Biometeorol 2024; 68:743-748. [PMID: 38214750 DOI: 10.1007/s00484-024-02619-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 12/15/2023] [Accepted: 01/04/2024] [Indexed: 01/13/2024]
Abstract
Hot droughts, droughts attributed to below-average precipitation and exceptional warmth, are increasingly common in the twenty-first century, yet little is known about their effect on coniferous tree growth because of their historical rarity. In much of the American West, including California, radial tree growth is principally driven by precipitation, and narrow ring widths are typically associated with either drier or drought conditions. However, for species growing at high elevations (e.g., Larix lyalli, Pinus albicaulis), growth can be closely aligned with above-average temperatures with maximum growth coinciding with meteorological drought, suggesting that the growth effects of drought span from adverse to beneficial depending on location. Here, we compare radial growth responses of three high-elevation old-growth pines (Pinus jeffreyi, P. lambertiana, and P. contorta) growing in the San Jacinto Mountains, California, during a twenty-first-century hot drought (2000-2020) largely caused by exceptional warmth and a twentieth-century drought (1959-1966) principally driven by precipitation deficits. Mean radial growth during the hot drought was 12% above average while 18% below average during the mid-century drought illustrating that the consequences of environmental stress exhibit spatiotemporal variability. We conclude that the effects of hot droughts on tree growth in high-elevation forests may produce responses different than what is commonly associated with extended dry periods for much of western North America's forested lands at lower elevational ranges and likely applies to other mountainous regions (e.g., Mediterranean Europe) defined by summer-dry conditions. Thus, the climatological/biological interactions discovered in Southern California may offer clues to the unique nature of high-elevation forested ecosystems globally.
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Affiliation(s)
- Paul A Knapp
- Carolina Tree-Ring Science Laboratory, Department of Geography, Environment and Sustainability, University of North Carolina Greensboro, Greensboro, NC, USA.
| | - Peter T Soulé
- Appalachian Tree Ring Lab, Department of Geography and Planning, Appalachian State University, Boone, NC, USA
| | - Tyler J Mitchell
- Carolina Tree-Ring Science Laboratory, Department of Geography, Environment and Sustainability, University of North Carolina Greensboro, Greensboro, NC, USA
| | - Avery A Catherwood
- Carolina Tree-Ring Science Laboratory, Department of Geography, Environment and Sustainability, University of North Carolina Greensboro, Greensboro, NC, USA
| | - Hunter S Lewis
- Carolina Tree-Ring Science Laboratory, Department of Geography, Environment and Sustainability, University of North Carolina Greensboro, Greensboro, NC, USA
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19
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Kim D, Guadagno CR, Ewers BE, Mackay DS. Combining PSII photochemistry and hydraulics improves predictions of photosynthesis and water use from mild to lethal drought. Plant Cell Environ 2024; 47:1255-1268. [PMID: 38178610 DOI: 10.1111/pce.14806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2023] [Revised: 12/10/2023] [Accepted: 12/20/2023] [Indexed: 01/06/2024]
Abstract
Rising temperatures and increases in drought negatively impact the efficiency and sustainability of both agricultural and forest ecosystems. Although hydraulic limitations on photosynthesis have been extensively studied, a solid understanding of the links between whole plant hydraulics and photosynthetic processes at the cellular level under changing environmental conditions is still missing, hampering our predictive power for plant mortality. Here, we examined plant hydraulic traits and CO2 assimilation rate under progressive water limitation by implementing Photosystem II (PSII) dynamics with a whole plant process model (TREES). The photosynthetic responses to plant water status were parameterized based on measurements of chlorophyll a fluorescence, gas exchange and water potential for Brassica rapa (R500) grown in a greenhouse under fully watered to lethal drought conditions. The updated model significantly improved predictions of photosynthesis, stomatal conductance and leaf water potential. TREES with PSII knowledge predicted a larger hydraulic safety margin and a decrease in percent loss of conductivity. TREES predicted a slower decrease in leaf water potential, which agreed with measurements. Our results highlight the pressing need for incorporating PSII drought photochemistry into current process models to capture cross-scale plant water dynamics from cell to whole plant level.
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Affiliation(s)
- Dohyoung Kim
- Department of Geography, State University of New York at Buffalo, Buffalo, New York, USA
| | | | - Brent E Ewers
- Department of Botany, University of Wyoming, Laramie, Wyoming, USA
| | - D Scott Mackay
- Department of Geography, State University of New York at Buffalo, Buffalo, New York, USA
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20
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Shang B, Agathokleous E, Calatayud V, Peng J, Xu Y, Li S, Liu S, Feng Z. Drought mitigates the adverse effects of O 3 on plant photosynthesis rather than growth: A global meta-analysis considering plant functional types. Plant Cell Environ 2024; 47:1269-1284. [PMID: 38185874 DOI: 10.1111/pce.14808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Accepted: 12/21/2023] [Indexed: 01/09/2024]
Abstract
Tropospheric ozone (O3 ) is a phytotoxic air pollutant adversely affecting plant growth. High O3 exposures are often concurrent with summer drought. The effects of both stresses on plants are complex, and their interactions are not yet well understood. Here, we investigate whether drought can mitigate the negative effects of O3 on plant physiology and growth based on a meta-analysis. We found that drought mitigated the negative effects of O3 on plant photosynthesis, but the modification of the O3 effect on the whole-plant biomass by drought was not significant. This is explained by a compensatory response of water-deficient plants that leads to increased metabolic costs. Relative to water control condition, reduced water treatment decreased the effects of O3 on photosynthetic traits, and leaf and root biomass in deciduous broadleaf species, while all traits in evergreen coniferous species showed no significant response. This suggested that the mitigating effects of drought on the negative impacts of O3 on the deciduous broadleaf species were more extensive than on the evergreen coniferous ones. Therefore, to avoid over- or underestimations when assessing the impact of O3 on vegetation growth, soil moisture should be considered. These results contribute to a better understanding of terrestrial ecosystem responses under global change.
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Affiliation(s)
- Bo Shang
- Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Ecology and Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
| | - Evgenios Agathokleous
- Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Ecology and Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
| | - Vicent Calatayud
- Fundación CEAM, c/Charles R. Darwin 14, Parque Tecnológico, Paterna, Valencia, Spain
| | - Jinlong Peng
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Yansen Xu
- Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Ecology and Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
| | - Shuangjiang Li
- Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Ecology and Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
| | - Shuo Liu
- Zhejiang Carbon Neutral Innovation Institute, Zhejiang University of Technology, Hangzhou, Zhejiang, China
| | - Zhaozhong Feng
- Collaborative Innovation Center on Forecast and Evaluation of Meteorological Disasters (CIC-FEMD), Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
- Key Laboratory of Ecosystem Carbon Source and Sink, China Meteorological Administration (ECSS-CMA), School of Ecology and Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing, Jiangsu, China
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21
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He L, Wu Z, Wang X, Zhao C, Cheng D, Du C, Wang H, Gao Y, Zhang R, Han J, Xu J. A novel maize F-bZIP member, ZmbZIP76, functions as a positive regulator in ABA-mediated abiotic stress tolerance by binding to ACGT-containing elements. Plant Sci 2024; 341:111952. [PMID: 38072329 DOI: 10.1016/j.plantsci.2023.111952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Revised: 10/31/2023] [Accepted: 12/06/2023] [Indexed: 02/10/2024]
Abstract
The group F-bZIP transcription factors (TFs) in Arabidopsis are involved in nutrient deficiency or salt stress responses. Nevertheless, our learning about the functions of group F-bZIP genes in maize remains limited. Here, we cloned a new F-bZIP gene (ZmbZIP76) from maize inbred line He344. The expression of ZmbZIP76 in maize was dramatically induced by high salt, osmotic stress and abscisic acid. Accordingly, overexpression of ZmbZIP76 increased tolerance of transgenic plants to salt and osmotic stress. In addition, ZmbZIP76 functions as a nuclear transcription factor and upregulates the expression of a range of abiotic stress-responsive genes by binding to the ACGT-containing elements, leading to enhanced reactive oxygen species (ROS) scavenging capability, increased abscisic acid level, proline content, and ratio of K+/Na+, reduced water loss rate, and membrane damage. These physiological changes caused by ZmbZIP76 ultimately enhanced tolerance of transgenic plants to salt and osmotic stress.
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Affiliation(s)
- Lin He
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Zixuan Wu
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Xueheyuan Wang
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Changjiang Zhao
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Dianjun Cheng
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Chuhuai Du
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Haoyu Wang
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Yuan Gao
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Ruijia Zhang
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina
| | - Jienan Han
- Institute of Crop Science, Chinese Academy of Agricultural Science, No. 12 Zhongguancun South Street, Haidian District, Beijing 100081, PR China.
| | - Jingyu Xu
- Key Laboratory of Low Carbon Green Agriculture in Northeast Plain, Ministry of Agriculture and Rural Affairs, Heilongjiang Bayi Agricultural University, 5 Xinfeng Road, Daqing 163319, PRChina.
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22
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Liu S, Liu J, She J, Xie Z, Zhou L, Dai Q, Zhang X, Wan Y, Yin M, Dong X, Zhao M, Chen D, Wang J. Microbial features with uranium pollution in artificial reservoir sediments at different depths under drought stress. Sci Total Environ 2024; 919:170694. [PMID: 38325477 DOI: 10.1016/j.scitotenv.2024.170694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 12/22/2023] [Accepted: 02/02/2024] [Indexed: 02/09/2024]
Abstract
The uranium (U) containing leachate from uranium tailings dam into the natural settings, may greatly affect the downstream environment. To reveal such relationship between uranium contamination and microbial communities in the most affected downstream environment under drought stress, a 180 cm downstream artificial reservoir depth sediment profile was collected, and the microbial communities and related genes were analyzed by 16S rDNA and metagenomics. Besides, the sequential extraction scheme was employed to shed light on the distinct role of U geochemical speciations in shaping microbial community structures. The results showed that U content ranged from 28.1 to 70.1 mg/kg, with an average content of 44.9 mg/kg, significantly exceeding the value of background sediments. Further, U in all the studied sediments was related to remarkably high portions of mobile fractions, and U was likely deposited layer by layer depending on the discharge/leachate inputs from uranium-involving anthoropogenic facilities/activities upstream. The nexus between U speciation, physico-chemical indicators and microbial composition showed that Fe, S, and N metabolism played a vital role in microbial adaptation to U-enriched environment; meanwhile, the fraction of Ureducible and the Fe and S contents had the most significant effects on microbial community composition in the sediments under drought stress.
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Affiliation(s)
- Siyu Liu
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Juan Liu
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Jingye She
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Zhenyu Xie
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Lei Zhou
- School of Environment and Resource, Key Laboratory of Solid Waste Treatment and Resource Recycling, Ministry of Education, Southwest University of Science and Technology, Mianyang, China
| | - Qunwei Dai
- School of Environment and Resource, Key Laboratory of Solid Waste Treatment and Resource Recycling, Ministry of Education, Southwest University of Science and Technology, Mianyang, China
| | - Xing Zhang
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Yuebing Wan
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Meiling Yin
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China
| | - Xinjiao Dong
- School of Life & Environmental Science, Wenzhou University, Wenzhou, China
| | - Min Zhao
- School of Life & Environmental Science, Wenzhou University, Wenzhou, China
| | - Diyun Chen
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China; Guangdong Provincial Key Laboratory of Radionuclides Pollution Control and Resources, Guangzhou, China
| | - Jin Wang
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, China; Guangdong Provincial Key Laboratory of Radionuclides Pollution Control and Resources, Guangzhou, China.
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23
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de Oliveira Aparecido LE, Torsoni GB, de Lima RF, Mesquita DZ, Peche PM. Agroclimatic mapping for olive cultivation in Brazil: pinpointing optimal growing regions. J Sci Food Agric 2024; 104:3361-3370. [PMID: 38092559 DOI: 10.1002/jsfa.13221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 12/11/2023] [Accepted: 12/12/2023] [Indexed: 01/04/2024]
Abstract
BACKGROUND This research aimed to identify the agroclimatic zones in Brazil, excluding Rio Grande do Sul, that are suitable for olive (Olea europaea L.) cultivation, considering both climatic and topographical factors. Olives require specific conditions: moderate winter temperatures (7-15 °C), warmer summers (25-35 °C) and sufficient water during growth and fruit maturation. They can endure some drought, making them a viable option for agricultural diversification. Using daily meteorological data from 1989 to 2023 from NASA-POWER, this study analyzed variables like air temperature (minimum and maximum) and rainfall. Key climate variables were the mean air temperature in winter (T_w), spring (T_s), summer (T_su) and autumn (T_a) and total annual precipitation (Prec). Criteria for suitability included: T_w between 5 and 20 °C, T_s between 15 and 23 °C, T_su between 15 and 30 °C, T_a between 15 and 22 °C, annual precipitation over 900 mm and altitude below 900 m. Geographic information system software and Python 3.8 were employed for data analysis and zoning. RESULTS Results indicated that only 1.92% of the analyzed area, mainly in Minas Gerais, was suitable for olive cultivation. High temperatures and low rainfall in Brazil, particularly in the North and Midwest, make 59.56% of the country unsuitable for olive farming. Additionally, 18.58% of the land, mainly in the Northeast, faces challenges due to extreme heat (T_w) and insufficient water supply. © 2023 Society of Chemical Industry.
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Affiliation(s)
| | | | - Rafael Fausto de Lima
- Faculdade de Ciências Agrárias e Veterinárias - Câmpus de Jaboticabal - Unesp, Jaboticabal, Brazil
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24
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Luan J, Li S, Liu S, Wang Y, Ding L, Lu H, Chen L, Zhang J, Zhou W, Han S, Zhang Y, Hättenschwiler S. Biodiversity mitigates drought effects in the decomposer system across biomes. Proc Natl Acad Sci U S A 2024; 121:e2313334121. [PMID: 38498717 DOI: 10.1073/pnas.2313334121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2023] [Accepted: 02/08/2024] [Indexed: 03/20/2024] Open
Abstract
Multiple facets of global change affect the earth system interactively, with complex consequences for ecosystem functioning and stability. Simultaneous climate and biodiversity change are of particular concern, because biodiversity may contribute to ecosystem resistance and resilience and may mitigate climate change impacts. Yet, the extent and generality of how climate and biodiversity change interact remain insufficiently understood, especially for the decomposition of organic matter, a major determinant of the biosphere-atmosphere carbon feedbacks. With an inter-biome field experiment using large rainfall exclusion facilities, we tested how drought, a common prediction of climate change models for many parts of the world, and biodiversity in the decomposer system drive decomposition in forest ecosystems interactively. Decomposing leaf litter lost less carbon (C) and especially nitrogen (N) in five different forest biomes following partial rainfall exclusion compared to conditions without rainfall exclusion. An increasing complexity of the decomposer community alleviated drought effects, with full compensation when large-bodied invertebrates were present. Leaf litter mixing increased diversity effects, with increasing litter species richness, which contributed to counteracting drought effects on C and N loss, although to a much smaller degree than decomposer community complexity. Our results show at a relevant spatial scale covering distinct climate zones that both, the diversity of decomposer communities and plant litter in forest floors have a strong potential to mitigate drought effects on C and N dynamics during decomposition. Preserving biodiversity at multiple trophic levels contributes to ecosystem resistance and appears critical to maintain ecosystem processes under ongoing climate change.
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Affiliation(s)
- Junwei Luan
- Sanya Research Base, International Centre for Bamboo and Rattan, Sanya 572022, People's Republic of China
- Institute of Resources and Environment, Key Laboratory of Bamboo and Rattan Science and Technology of State Forestry and Grassland Administration, International Centre for Bamboo and Rattan, Beijing 100102, People's Republic of China
| | - Siyu Li
- Sanya Research Base, International Centre for Bamboo and Rattan, Sanya 572022, People's Republic of China
- Institute of Resources and Environment, Key Laboratory of Bamboo and Rattan Science and Technology of State Forestry and Grassland Administration, International Centre for Bamboo and Rattan, Beijing 100102, People's Republic of China
| | - Shirong Liu
- Key Laboratory of Forest Ecology and Environment of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, People's Republic of China
| | - Yi Wang
- Institute of Resources and Environment, Key Laboratory of Bamboo and Rattan Science and Technology of State Forestry and Grassland Administration, International Centre for Bamboo and Rattan, Beijing 100102, People's Republic of China
| | - Liping Ding
- Institute of Resources and Environment, Key Laboratory of Bamboo and Rattan Science and Technology of State Forestry and Grassland Administration, International Centre for Bamboo and Rattan, Beijing 100102, People's Republic of China
| | - Haibo Lu
- Key Laboratory of Forest Ecology and Environment of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, People's Republic of China
- Department of Geography, Faculty of Arts and Sciences and Zhuhai Branch of State Key Laboratory of Earth Surface Processes and Resource Ecology, Beijing Normal University, Zhuhai 519087, People's Republic of China
| | - Lin Chen
- Experimental Center of Tropical Forestry, Chinese Academy of Forestry, Pingxiang 532600, People's Republic of China
| | - Junhui Zhang
- School of Life Sciences, Qufu Normal University, Qufu 273165, People's Republic of China
| | - Wenjun Zhou
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan 666303, People's Republic of China
| | - Shijie Han
- School of Life Sciences, Qufu Normal University, Qufu 273165, People's Republic of China
| | - Yiping Zhang
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan 666303, People's Republic of China
| | - Stephan Hättenschwiler
- Centre d'Ecologie Fonctionnelle et Evolutive, Univ Montpellier, CNRS, Ecole Pratique des Hautes Etudes, Institut de Recherche pour le Développement, Montpellier 34293, France
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25
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Gazol A, Valeriano C, Colangelo M, Ibáñez R, Valerio M, Rubio-Cuadrado Á, Camarero JJ. Growth of tree (Pinus sylvestris) and shrub (Amelanchier ovalis) species is constrained by drought with higher shrub sensitivity in dry sites. Sci Total Environ 2024; 918:170539. [PMID: 38296069 DOI: 10.1016/j.scitotenv.2024.170539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 01/26/2024] [Accepted: 01/26/2024] [Indexed: 02/09/2024]
Abstract
We lack understanding of how variable is radial growth of coexisting tree and shrub species, and how growth is constrained by drought depending on site aridity. Here, we compared the radial growth of two widespread and coexisting species, a winter deciduous shrub (Amelanchier ovalis Medik.) and an evergreen conifer tree (Pinus sylvestris L.). We sampled four sites in Northeastern Spain subjected to different aridity levels and used dendrochronological methods to quantify growth patterns and responses to climate variables. The growth of the two species varied between regions, being lower in the driest sites. The first-order autocorrelation (growth persistence) was higher in more mesic sites but without clear differences between species. Tree and shrub growth negatively responded to elevated summer temperatures and positively to spring-summer precipitation and wet conditions. However, negative growth responses of the shrub to drought were only observed in the two driest sites in contrast to widespread responses of the tree. Abrupt growth reductions were common in the drier sites, but resilience indices show that the two species rapidly recovered pre-drought growth levels. The lower growth synchrony of the shrub as compared to the tree can be due to the multistemmed architecture, fast growth and low stature of the shrub. Besides, the high dependency of the shrub growth on summer rainfall can explain why drought limitations were only apparent in the two driest sites. In any case, results point out to the dendrochronological potential of shrubs, which is particularly relevant giving its ability to inhabit woodlands and treeless regions under harsh climatic conditions. Nevertheless, further research is required to elucidate the capacity of shrub species to tolerate drought, as well as to understand how shrubs thrive in water- and cold-limited environments.
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Affiliation(s)
- Antonio Gazol
- Instituto Pirenaico de Ecología (IPE-CSIC), Avda. Montañana 1005, E-50192 Zaragoza, Spain.
| | - Cristina Valeriano
- Instituto Pirenaico de Ecología (IPE-CSIC), Avda. Montañana 1005, E-50192 Zaragoza, Spain
| | - Michele Colangelo
- Scuola di Scienze Agrarie, Forestali, Alimentari e Ambientali, Università della Basilicata, Viale dell'Ateneo Lucano 10, 85100 Potenza, Italy
| | - Ricardo Ibáñez
- Departamento de Biología Ambiental, Facultad de Ciencias, Universidad de Navarra, Pamplona 31008, Navarra, Spain
| | - Mercedes Valerio
- Departamento de Biología Ambiental, Facultad de Ciencias, Universidad de Navarra, Pamplona 31008, Navarra, Spain; Department of Botany, Faculty of Sciences, University of South Bohemia, Na Zlaté stoce 1, 370 05 České Budějovice, Czech Republic
| | - Álvaro Rubio-Cuadrado
- Departamento de Sistemas y Recursos Naturales, Escuela Técnica Superior de Ingeniería de Montes, Forestal y del Medio Natural, Universidad Politécnica de Madrid, Ciudad Universitaria s/n, 28040 Madrid, Spain
| | - J Julio Camarero
- Instituto Pirenaico de Ecología (IPE-CSIC), Avda. Montañana 1005, E-50192 Zaragoza, Spain
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Reynaert S, D'Hose T, De Boeck HJ, Laorden D, Dult L, Verbruggen E, Nijs I. Can permanent grassland soils with elevated organic carbon buffer negative effects of more persistent precipitation regimes on forage grass performance? Sci Total Environ 2024; 918:170623. [PMID: 38320706 DOI: 10.1016/j.scitotenv.2024.170623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 01/03/2024] [Accepted: 01/31/2024] [Indexed: 02/13/2024]
Abstract
Agricultural practices enhancing soil organic carbon (SOC) show potential to buffer negative effects of climate change on forage grass performance. We tested this by subjecting five forage grass varieties differing in fodder quality and drought/flooding resistance to increased persistence in summer precipitation regimes (PR) across sandy and sandy-loam soils from either permanent (high SOC) or temporary grasslands (low SOC) in adjacent parcels. Over the course of two consecutive summers, monoculture mesocosms were subjected to rainy/dry weather alternation either every 3 days or every 30 days, whilst keeping total precipitation equal. Increased PR persistence induced species-specific drought damage and productivity declines. Soils from permanent grasslands with elevated SOC buffered plant quality, but buffering effects of SOC on drought damage, nutrient availability and yield differed between texture classes. In the more persistent PR, Festuca arundinacea FERMINA was the most productive species but had the lowest quality under both ample water supply and mild soil drought, whilst under the most intense soil droughts, Festulolium FESTILO maintained the highest yields. The hybrid Lolium × boucheanum kunth MELCOMBI had intermediate productivity and both Lolium perenne varieties showed the lowest yields under soil drought, but the highest forage quality (especially the tetraploid variety MELFORCE). Performance varied with plant maturity stage and across seasons/years and was driven by altered water and nutrient availability and related nitrogen nutrition among species during drought and upon rewetting. Moreover, whilst permanent grassland soils showed the most consistent positive effects on plant performance, their available water capacity also declined under increased PR persistence. We conclude that permanent grassland soils with historically elevated SOC likely buffer negative effects of increasing summer weather persistence on forage grass performance, but may also be more sensitive to degradation under climate change.
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Affiliation(s)
- Simon Reynaert
- Plants and Ecosystems (PLECO), Department of Biology, University of Antwerp, B-2610 Wilrijk, Belgium.
| | - Tommy D'Hose
- Flanders Research Institute for Agricultural, Food and Fisheries Research (ILVO), Burg. Van Gansberghelaan 109, B-9820 Merelbeke, Belgium
| | - Hans J De Boeck
- Plants and Ecosystems (PLECO), Department of Biology, University of Antwerp, B-2610 Wilrijk, Belgium; School of Ecology and Environmental Sciences, Yunnan University, Kunming 650091, China
| | - David Laorden
- Universidad Autónoma de Madrid, Department of Biology, Darwin street 2, 28049 Madrid, Spain
| | - Liselot Dult
- Plants and Ecosystems (PLECO), Department of Biology, University of Antwerp, B-2610 Wilrijk, Belgium
| | - Erik Verbruggen
- Plants and Ecosystems (PLECO), Department of Biology, University of Antwerp, B-2610 Wilrijk, Belgium
| | - Ivan Nijs
- Plants and Ecosystems (PLECO), Department of Biology, University of Antwerp, B-2610 Wilrijk, Belgium
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27
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Hu Y, Wei F, Wang S, Zhang W, Fensholt R, Xiao X, Fu B. Critical thresholds for nonlinear responses of ecosystem water use efficiency to drought. Sci Total Environ 2024; 918:170713. [PMID: 38325460 DOI: 10.1016/j.scitotenv.2024.170713] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2023] [Revised: 02/01/2024] [Accepted: 02/03/2024] [Indexed: 02/09/2024]
Abstract
Climate change is expected to lead to greater variability in precipitation and drought in different regions. However, the responses of ecosystem carbon and water cycles (i.e., water use efficiency, WUE) to different levels of drought stress are not fully understood. Here, we examined the relationship between WUE and precipitation anomalies and identified the critical drought threshold (DrCW) above which WUE showed substantial decrease. The results revealed that 85.56 % of the study area had nonlinear WUE responses to drought stress; that is, the WUE decreased sustainably and steeply when the precipitation deficit exceeded the DrCW. DrCW indicates inflection points for changing ecosystem responses from relatively resistant to vulnerable to drought stress, thus providing an instructive early warning for intensifying suppressive impacts on vegetation growth. Additionally, DrCW varies across aridity gradients and among vegetation types. Based on the DrCW at the pixel level, the future eco-drought is projected to increase in >67 % of the study area under both the SSP2&RCP4.5 and SSP5&RCP8.5 scenarios by the end of the 21st century. Our study elucidates the response of the ecosystem function to drought and supports the development of accurate ecosystem adaptation policies for future drought stress.
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Affiliation(s)
- Ying Hu
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Fangli Wei
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of sciences, Beijing 100101, China
| | - Shuai Wang
- State Key Laboratory of Earth Surface Processes and Resource Ecology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Wenmin Zhang
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Rasmus Fensholt
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Xiangming Xiao
- Department of Microbiology and Plant Biology, Center for Earth Observation and Modeling, University of Oklahoma, Norman, OK, USA
| | - Bojie Fu
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.
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28
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Wang A, Gao X, Zhou Z, Siddique KHM, Yang H, Wang J, Zhang S, Zhao X. A novel index for vegetation drought assessment based on plant water metabolism and balance under vegetation restoration on the Loess Plateau. Sci Total Environ 2024; 918:170549. [PMID: 38309335 DOI: 10.1016/j.scitotenv.2024.170549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2023] [Revised: 01/15/2024] [Accepted: 01/27/2024] [Indexed: 02/05/2024]
Abstract
Vegetation is vital to the ecosystem, contributing to the global carbon balance, but susceptible to the impacts of climate change. Monitoring vegetation drought remains challenging due to the lack of widely accepted drought indices. This study focused on vegetation, and simulated the vegetation suitable water demand and soil available water supply (calculated by Remote-sensing-based Water Balance Assessment Tool model). The standardized Vegetation Water deficit Index (SVWDI) was established by calculating the vegetation water deficit, which reflects the response of vegetation to drought. We examined the spatiotemporal evolution of vegetation drought on the Loess Plateau and evaluated the applicability of standardized vegetation water deficit index. Our findings revealed that the standardized vegetation water deficit index demonstrated an overall upward trend across different time scales from 1991 to 2020. Drought conditions were concentrated in the first 20 years of the study period, but vegetation drought on the Loess Plateau has been alleviated in the past decade. Moreover, as the time scale extended, the trend of SVWDI generally decreased, with approximately 49.50 % (1-month scale), 46.66 % (3-month scale), 47.08 % (12-month scale), and 32.16 % (24-month scale) of the grid areas experiencing increased SVWDI. The correlation between SVWDI and tree-ring width index (TRWI) performed well under all precipitation gradients, but the Palmer drought severity index (PDSI) was only highly correlated with TRWI in regions with low precipitation. In terms of the relationship with vegetation health, SVWDI demonstrated the highest correlation with the normalized difference vegetation index (NDVI) across different time scales, followed by PDSI and standardized precipitation evapotranspiration index (SPEI). This study provides insights into the evolution of vegetation drought in response to climate change. The findings can guide initiatives such as returning farmland to forest and grassland on the Loess Plateau to aid climate change adaptation strategies.
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Affiliation(s)
- Ai Wang
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling 712100, Shaanxi Province, China
| | - Xuerui Gao
- Institute of Soil and Water Conservation, Northwest A&F University, Yangling, Shaanxi 712100, China.
| | - Zeyu Zhou
- China Water Resources Beifang Investigation, Design and Research Co. Ltd, Tianjin 300222, China
| | - Kadambot H M Siddique
- The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, Australia
| | - Hao Yang
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling 712100, Shaanxi Province, China
| | - Jichao Wang
- College of Water Resources and Architectural Engineering, Northwest A&F University, Yangling, Shaanxi 712100, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling 712100, Shaanxi Province, China
| | - Shuyu Zhang
- School of Environmental Science and Engineering, Southern University of Science and Technology, China
| | - Xining Zhao
- Institute of Soil and Water Conservation, Northwest A&F University, Yangling, Shaanxi 712100, China.
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Hou X, Kong Y, Teng Z, Yang C, Li Y, Zhu Z. Integrating genes and metabolites: unraveling mango's drought resilience mechanisms. BMC Plant Biol 2024; 24:208. [PMID: 38519933 PMCID: PMC10960439 DOI: 10.1186/s12870-024-04908-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Accepted: 03/14/2024] [Indexed: 03/25/2024]
Abstract
BACKGROUND Mango (Mangifera indica L.) faces escalating challenges from increasing drought stress due to erratic climate patterns, threatening yields, and quality. Understanding mango's drought response mechanisms is pivotal for resilience and food security. RESULTS Our RNA-seq analyses unveil 12,752 differentially expressed genes linked to stress signaling, hormone regulation, and osmotic adjustment. Weighted Gene Co-expression Network Analysis identified three essential genes-WRKY transcription factor 3, polyamine oxidase 4, and protein MEI2-like 1-as drought defense components. WRKY3 having a role in stress signaling and defense validates its importance. Polyamine oxidase 4, vital in stress adaptation, enhances drought defense. Protein MEI2-like 1's significance emerges, hinting at novel roles in stress responses. Metabolite profiling illuminated Mango's metabolic responses to drought stress by presenting 990 differentially abundant metabolites, mainly related to amino acids, phenolic acids, and flavonoids, contributing to a deeper understanding of adaptation strategies. The integration between genes and metabolites provided valuable insights by revealing the correlation of WRKY3, polyamine oxidase 4 and MEI2-like 1 with amino acids, D-sphingnosine and 2,5-Dimethyl pyrazine. CONCLUSIONS This study provides insights into mango's adaptive tactics, guiding future research for fortified crop resilience and sustainable agriculture. Harnessing key genes and metabolites holds promise for innovative strategies enhancing drought tolerance in mango cultivation, contributing to global food security efforts.
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Affiliation(s)
- Xianbin Hou
- Guangxi Key Laboratory of Biology for Mongo, Baise University, Baise, 533000, China
- College of Agriculture and Food Engineering, Baise University, Baise, 533000, China
| | - Yu Kong
- Guangxi Key Laboratory of Biology for Mongo, Baise University, Baise, 533000, China
- College of Agriculture and Food Engineering, Baise University, Baise, 533000, China
| | - Zheng Teng
- Guangxi Key Laboratory of Biology for Mongo, Baise University, Baise, 533000, China
- College of Agriculture and Food Engineering, Baise University, Baise, 533000, China
| | - Cuifeng Yang
- Guangxi Key Laboratory of Biology for Mongo, Baise University, Baise, 533000, China
- College of Agriculture and Food Engineering, Baise University, Baise, 533000, China
| | - Yufeng Li
- Guangxi Key Laboratory of Biology for Mongo, Baise University, Baise, 533000, China.
- College of Agriculture and Food Engineering, Baise University, Baise, 533000, China.
| | - Zhengjie Zhu
- Guangxi Key Laboratory of Biology for Mongo, Baise University, Baise, 533000, China.
- College of Agriculture and Food Engineering, Baise University, Baise, 533000, China.
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Guizani A, Babay E, Askri H, Sialer MF, Gharbi F. Screening for drought tolerance and genetic diversity of wheat varieties using agronomic and molecular markers. Mol Biol Rep 2024; 51:432. [PMID: 38520570 DOI: 10.1007/s11033-024-09340-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 02/09/2024] [Indexed: 03/25/2024]
Abstract
BACKGROUND The future predictions for frequent and severe droughts will represent a significant threat to wheat yield and food security. In this context, breeding has proven to be the most efficient approach to enhance wheat productivity in dry environments. METHODS AND RESULTS In this study, both agronomic and molecular-based approaches were used to evaluate the response of twenty-eight Tunisian wheat varieties to drought stress. The primary objective was to screen these varieties for drought tolerance using molecular and agro-morphological markers. All varieties were significantly affected by drought stress regarding various traits including total dry matter, straw length, flag leaf area, number of senescent leaves, SPAD value, grain yield and grain number. Furthermore, substantial variability in drought-stress tolerance was observed among wheat genotypes. The cluster analysis and principal component analyses confirmed the existence of genotypic variation in growth and yield impairments induced by drought. The stress susceptibility index (SSI) and tolerance index (TOL) proved to be the most effective indices and were strongly correlated with the varying levels of genotypic tolerance. The genotyping evaluation resulted in the amplification of 101 alleles using highly polymorphic 12 SSR markers, showed an average polymorphism of 74%. CONCLUSIONS Taken together, the combination of agronomic and molecular approaches revealed that Karim, Td7, D117 and Utique are the most drought-tolerant wheat varieties. These varieties are particularly promising candidates for genetic improvements and can be utilized as potential genitors for future breeding programs in arid and semi-arid regions.
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Affiliation(s)
- Asma Guizani
- Laboratory of Mycology, Pathologies and Biomarkers LR16ES05, Faculty of Sciences of Tunis, University of Tunis El Manar, Tunis, 2092, Tunisia.
| | - Elyes Babay
- Agricultural Applied Biotechnology Laboratory (LR16INRAT06), Institut National de la Recherche Agronomique de Tunisie (INRAT), University of Carthage, Tunis, Tunisia
| | - Hend Askri
- Laboratory of Valorization of Non-Conventional Water (LR16INRGREF02), Water and Forestry, National Institute of Rural Engineering, Carthage University, Tunis, Tunisia
| | | | - Fatma Gharbi
- Laboratory of Mycology, Pathologies and Biomarkers LR16ES05, Faculty of Sciences of Tunis, University of Tunis El Manar, Tunis, 2092, Tunisia
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Hafeez A, Ali S, Javed MA, Iqbal R, Khan MN, Çiğ F, Sabagh AE, Abujamel T, Harakeh S, Ercisli S, Ali B. Breeding for water-use efficiency in wheat: progress, challenges and prospects. Mol Biol Rep 2024; 51:429. [PMID: 38517566 DOI: 10.1007/s11033-024-09345-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2023] [Accepted: 02/12/2024] [Indexed: 03/24/2024]
Abstract
Drought poses a significant challenge to wheat production globally, leading to substantial yield losses and affecting various agronomic and physiological traits. The genetic route offers potential solutions to improve water-use efficiency (WUE) in wheat and mitigate the negative impacts of drought stress. Breeding for drought tolerance involves selecting desirable plants such as efficient water usage, deep root systems, delayed senescence, and late wilting point. Biomarkers, automated and high-throughput techniques, and QTL genes are crucial in enhancing breeding strategies and developing wheat varieties with improved resilience to water scarcity. Moreover, the role of root system architecture (RSA) in water-use efficiency is vital, as roots play a key role in nutrient and water uptake. Genetic engineering techniques offer promising avenues to introduce desirable RSA traits in wheat to enhance drought tolerance. These technologies enable targeted modifications in DNA sequences, facilitating the development of drought-tolerant wheat germplasm. The article highlighted the techniques that could play a role in mitigating drought stress in wheat.
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Affiliation(s)
- Aqsa Hafeez
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.
| | - Shehzad Ali
- Department of Environmental Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan
| | - Muhammad Ammar Javed
- Institute of Industrial Biotechnology, Government College University, Lahore, 54000, Pakistan
| | - Rashid Iqbal
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63000, Pakistan
| | - Muhammad Nauman Khan
- Department of Botany, Islamia College Peshawar, Peshawar, 25120, Pakistan
- Biology Laboratory, University Public School, University of Peshawar, Peshawar, 25120, Pakistan
| | - Fatih Çiğ
- Department of Field Crops, Faculty of Agriculture, Siirt University, Siirt, 56100, Turkey
| | - Ayman El Sabagh
- Department of Field Crops, Faculty of Agriculture, Siirt University, Siirt, 56100, Turkey
| | - Turki Abujamel
- Vaccines and Immunotherapy Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, 21589, Saudi Arabia
- Department of Medical Laboratory Sciences, Faculty of Applied Medical Sciences, King Abdulaziz University, Jeddah, 21589, Saudi Arabia
| | - Steve Harakeh
- King Fahd Medical Research Center, King Abdulaziz University, Jeddah, 21589, Saudi Arabia
- Yousef Abdullatif Jameel Chair of Prophetic Medicine Application, Faculty of Medicine, King Abdulaziz University, Jeddah, 21589, Saudi Arabia
| | - Sezai Ercisli
- Department of Horticulture, Agricultural Faculty, Ataturk University, Erzurum, 25240, Türkiye
- HGF Agro, Ata Teknokent, Erzurum, 25240, Türkiye
| | - Baber Ali
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, 45320, Pakistan.
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Wang H, Ye T, Guo Z, Yao Y, Tu H, Wang P, Zhang Y, Wang Y, Li X, Li B, Xiong H, Lai X, Xiong L. A double-stranded RNA binding protein enhances drought resistance via protein phase separation in rice. Nat Commun 2024; 15:2514. [PMID: 38514621 PMCID: PMC10957929 DOI: 10.1038/s41467-024-46754-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 03/08/2024] [Indexed: 03/23/2024] Open
Abstract
Drought stress significantly impacts global rice production, highlighting the critical need to understand the genetic basis of drought resistance in rice. Here, through a genome-wide association study, we reveal that natural variations in DROUGHT RESISTANCE GENE 9 (DRG9), encoding a double-stranded RNA (dsRNA) binding protein, contribute to drought resistance. Under drought stress, DRG9 condenses into stress granules (SGs) through liquid-liquid phase separation via a crucial α-helix. DRG9 recruits the mRNAs of OsNCED4, a key gene for the biosynthesis of abscisic acid, into SGs and protects them from degradation. In drought-resistant DRG9 allele, natural variations in the coding region, causing an amino acid substitution (G267F) within the zinc finger domain, increase DRG9's binding ability to OsNCED4 mRNA and enhance drought resistance. Introgression of the drought-resistant DRG9 allele into the elite rice Huanghuazhan significantly improves its drought resistance. Thus, our study underscores the role of a dsRNA-binding protein in drought resistance and its promising value in breeding drought-resistant rice.
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Affiliation(s)
- Huaijun Wang
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Tiantian Ye
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Zilong Guo
- Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Yilong Yao
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Haifu Tu
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Pengfei Wang
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Yu Zhang
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Yao Wang
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Xiaokai Li
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Bingchen Li
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Haiyan Xiong
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China
| | - Xuelei Lai
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China.
| | - Lizhong Xiong
- National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China.
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Çelik S. Gene expression analysis of potato drought-responsive genes under drought stress in potato ( Solanum tuberosum L.) cultivars. PeerJ 2024; 12:e17116. [PMID: 38525286 PMCID: PMC10960530 DOI: 10.7717/peerj.17116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Accepted: 02/26/2024] [Indexed: 03/26/2024] Open
Abstract
The potato (Solanum tuberosum L.), an important field crop consumed extensively worldwide, is adversely affected by abiotic stress factors especially drought. Therefore, it is vital to understand the genetic mechanism under drought stress to decrease loose of yield and quality . This trial aimed to screen drought-responsive gene expressions of potato and determine the drought-tolerant potato cultivar. The trial pattern is a completely randomized block design (CRBD) with four replications under greenhouse conditions. Four cultivars (Brooke, Orwell, Vr808, Shc909) were irrigated with four different water regimes (control and three stress conditions), and the gene expression levels of 10 potato genes were investigated. The stress treatments as follows: Control = 100% field capacity; slight drought = 75% field capacity; moderate drought = 50% field capacity, and severe drought 25% field capacity. To understand the gene expression under drought stress in potato genotypes, RT-qPCR analysis was performed and results showed that the genes most associated with drought tolerance were the StRD22 gene, MYB domain transcription factor, StERD7, Sucrose Synthase (SuSy), ABC Transporter, and StDHN1. The StHSP100 gene had the lowest genetic expression in all cultivars. Among the cultivars, the Orwell exhibited the highest expression of the StRD22 gene under drought stress. Overall, the cultivar with the highest gene expression was the Vr808, closely followed by the Brooke cultivar. As a result, it was determined that potato cultivars Orwell, Vr808, and Brooke could be used as parents in breeding programs to develop drought tolerant potato cultivars.
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Affiliation(s)
- Sadettin Çelik
- Genç Vocational School, Forestry Department, Bingol University, Bingol, Turkey
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Wang X, Chen S, Yang X, Zhu R, Liu M, Wang R, He N. Adaptation mechanisms of leaf vein traits to drought in grassland plants. Sci Total Environ 2024; 917:170224. [PMID: 38246381 DOI: 10.1016/j.scitotenv.2024.170224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 01/14/2024] [Accepted: 01/14/2024] [Indexed: 01/23/2024]
Abstract
Leaf veins play an important role in water transport, and are closely associated with photosynthesis and transpiration. Resource heterogeneity in the environment, particularly in water resources, causes changes in leaf vein structure and function, thereby affecting plant growth and community assemblages. Therefore, it is necessary to explore the spatial variation and evolutionary mechanisms of leaf veins in natural communities. Natural communities are composed of dominant and non-dominant species. However, few studies to date have explored the trait variation of dominant and non-dominant species on a large scale. In this study, we set up 10 sampling sites along the water gradient (from east to west) in the Loess Plateau of China, and measured and calculated the vein density (vein length per unit area, VLA), vein diameter (VD), and vein volume ratio (VVR) of 173 species, including dominant and non-dominant species. The mean values of VLA, VD, and VVR were 10.95 mm mm-2, 22.24 μm, and 3%, respectively. VD and VVR of the dominant species were significantly higher than those of the non-dominant species. Unexpectedly, there was no significant change in the VLA with the water gradient, although the VD increased with drought. Leaf vein traits did not change significantly with evolution. There was a significant trade-off between VLA and VD. Our findings demonstrate that the response of veins to environmental changes is dependent on the degree of drought and provide new insights for further large-scale studies.
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Affiliation(s)
- Xiaochun Wang
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Shuang Chen
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xue Yang
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Rong Zhu
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Miao Liu
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Ruili Wang
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China; Qinling National Forest Ecosystem Research Station, Yangling, Shaanxi 711600, China.
| | - Nianpeng He
- Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, 150040, China.
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Xu X, Liu Y, Tang C, Yang Y, Yu L, Lesueur D, Herrmann L, Di H, Li Y, Li Q, Xu J. Microbial resistance and resilience to drought and rewetting modulate soil N 2O emissions with different fertilizers. Sci Total Environ 2024; 917:170380. [PMID: 38281640 DOI: 10.1016/j.scitotenv.2024.170380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Revised: 01/17/2024] [Accepted: 01/21/2024] [Indexed: 01/30/2024]
Abstract
Future climate models indicate an enhanced severity of regional drought and frequent rewetting events, which may cause cascading impacts on soil nitrogen cycle and nitrous oxide (N2O) emissions, but the underlying microbial mechanism remains largely unknown. Here we report an incubation study that examined the impacts of soil moisture status and nitrification inhibitor (DCD) on the N2O-producers and N2O-reducers following the application of urea and composted swine manure in an acid soil. The soil moisture treatments included 100 % water-holding capacity (WHC) (wetting, 35.3 % gravimetric soil water content), 40 % WHC (drought, 7 % gravimetric soil water content), and 40 % to 100 % WHC (rewetting). The results showed that N2O emissions were significantly decreased under drought conditions and were significantly increased after rewetting. The resistance of ammonia-oxidizing bacteria and nosZII, which was inhibited by urea or manure application, modulated N2O emissions under drought conditions. The resilience of the functional guilds modulated their dominant role in N2O emissions with rewetting. Ammonia-oxidizing bacteria, nirS-type denitrifying bacteria and nosZI showed significant resilience in response to rewetting. Significant negative relationships were observed between N2O emissions and nosZII clade under wetting condition and between N2O emissions and nosZI clade after rewetting. Our results highlighted the importance of microbial resistance and resilience in modulating N2O emissions, which help to better understand the dominant way of N2O emissions, and consequently make efficient mitigation strategies under the global climate change.
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Affiliation(s)
- Xiaoya Xu
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China; College of Geography and Environment, Shandong Normal University, Jinan 250014, China
| | - Yaowei Liu
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Caixian Tang
- La Trobe Institute for Sustainable Agriculture and Food, Department of Animal, Plant and Soil Sciences, La Trobe University, Bundoora, VIC 3086, Australia
| | - Yihan Yang
- College of Geography and Environment, Shandong Normal University, Jinan 250014, China
| | - Lei Yu
- Shandong Agricultural Technology Extension Center, Jinan, China
| | - Didier Lesueur
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), UMR Eco&Sols, Hanoi, Viet Nam; Eco&Sols, Université de Montpellier (UMR), CIRAD, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE), Institut de Recherche pour le Développement (IRD), Montpellier SupAgro, 34060 Montpellier, France; Alliance of Biodiversity International and International Center for Tropical Agriculture (CIAT), Asia hub, Common Microbial Biotechnology Platform (CMBP), Hanoi, Viet Nam; School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment-Deakin University, Melbourne, VIC 3125, Australia; Chinese Academy of Tropical Agricultural Sciences, Rubber Research Institute, Haikou, China
| | - Laetitia Herrmann
- Alliance of Biodiversity International and International Center for Tropical Agriculture (CIAT), Asia hub, Common Microbial Biotechnology Platform (CMBP), Hanoi, Viet Nam; School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment-Deakin University, Melbourne, VIC 3125, Australia
| | - Hongjie Di
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Yong Li
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China.
| | - Qinfen Li
- Environmental and Plant Protection Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, Hainan, China
| | - Jianming Xu
- Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
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Puchi PF, Dalmonech D, Vangi E, Battipaglia G, Tognetti R, Collalti A. Contrasting patterns of water use efficiency and annual radial growth among European beech forests along the Italian peninsula. Sci Rep 2024; 14:6526. [PMID: 38499662 DOI: 10.1038/s41598-024-57293-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 03/16/2024] [Indexed: 03/20/2024] Open
Abstract
Tree mortality and forest dieback episodes are increasing due to drought and heat stress. Nevertheless, a comprehensive understanding of mechanisms enabling trees to withstand and survive droughts remains lacking. Our study investigated basal area increment (BAI), and δ13C-derived intrinsic water-use-efficiency (iWUE), to elucidate beech resilience across four healthy stands in Italy with varying climates and soil water availability. Additionally, fist-order autocorrelation (AR1) analysis was performed to detect early warning signals for potential tree dieback risks during extreme drought events. Results reveal a negative link between BAI and vapour pressure deficit (VPD), especially in southern latitudes. After the 2003 drought, BAI decreased at the northern site, with an increase in δ13C and iWUE, indicating conservative water-use. Conversely, the southern sites showed increased BAI and iWUE, likely influenced by rising CO2 and improved water availability. In contrast, the central site sustained higher transpiration rates due to higher soil water holding capacity (SWHC). Despite varied responses, most sites exhibited reduced resilience to future extreme events, indicated by increased AR1. Temperature significantly affected beech iWUE and BAI in northern Italy, while VPD strongly influenced the southern latitudes. The observed increase in BAI and iWUE in southern regions might be attributed to an acclimation response.
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Affiliation(s)
- Paulina F Puchi
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy.
- Institute of Bioeconomy, Italian National Research Council (CNR-IBE), Via Madonna del Piano 10, 50019, Sesto Fiorentino, Italy.
| | - Daniela Dalmonech
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy
- National Biodiversity Future Center (NBFC), 90133, Palermo, Italy
| | - Elia Vangi
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy
| | - Giovanna Battipaglia
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania 'L. Vanvitelli', Caserta, Italy
| | - Roberto Tognetti
- Faculty of Agricultural, Environmental and Food Sciences, Free University of Bozen-Bolzano, Piazza Università 1, 39100, Bolzano, Italy
| | - Alessio Collalti
- Forest Modelling Lab., Institute for Agriculture and Forestry Systems in the Mediterranean, National Research Council of Italy (CNR-ISAFOM), Via Madonna Alta 128, 06128, Perugia, Italy
- National Biodiversity Future Center (NBFC), 90133, Palermo, Italy
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Kwon H, Kim MY, Yang X, Lee SH. Unveiling synergistic QTLs associated with slow wilting in soybean (Glycine max [L.] Merr.). Theor Appl Genet 2024; 137:85. [PMID: 38502238 PMCID: PMC10951030 DOI: 10.1007/s00122-024-04585-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Accepted: 02/17/2024] [Indexed: 03/21/2024]
Abstract
KEY MESSAGE A stable QTL qSW_Gm10 works with a novel locus, qSW_Gm01, in a synergistic manner for controlling slow-wilting traits at the early vegetative stage under drought stress in soybean. Drought is one of the major environmental factors which limits soybean yield. Slow wilting is a promising trait that can enhance drought resilience in soybean without additional production costs. Recently, a Korean soybean cultivar SS2-2 was reported to exhibit slow wilting at the early vegetative stages. To find genetic loci responsible for slow wilting, in this study, quantitative trait loci (QTL) analysis was conducted using a recombinant inbred line (RIL) population derived from crossing between Taekwangkong (fast-wilting) and SS2-2 (slow-wilting). Wilting score and leaf moisture content were evaluated at the early vegetative stages for three years. Using the ICIM-MET module, a novel QTL on Chr01, qSW_Gm01 was identified, together with a previously known QTL, qSW_Gm10. These two QTLs were found to work synergistically for slow wilting of the RILs under the water-restricted condition. Furthermore, the SNP markers from the SoySNP50K dataset, located within these QTLs, were associated with the wilting phenotype in 30 diverse soybean accessions. Two genes encoding protein kinase 1b and multidrug resistance-associated protein 4 were proposed as candidate genes for qSW_Gm01 and qSW_Gm10, respectively, based on a comprehensive examination of sequence variation and gene expression differences in the parental lines under drought conditions. These genes may play a role in slow wilting by optimally regulating stomatal aperture. Our findings provide promising genetic resources for improving drought resilience in soybean and give valuable insights into the genetic mechanisms governing slow wilting.
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Affiliation(s)
- Hakyung Kwon
- Department of Agriculture, Forestry and Bioresources and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea
| | - Moon Young Kim
- Department of Agriculture, Forestry and Bioresources and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea
- Plant Genomics and Breeding Institute, Seoul National University, Seoul, Republic of Korea
| | - Xuefei Yang
- Key Laboratory of Herbage and Endemic Crop Biology of Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010030, China
| | - Suk-Ha Lee
- Department of Agriculture, Forestry and Bioresources and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
- Plant Genomics and Breeding Institute, Seoul National University, Seoul, Republic of Korea.
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Hareem M, Danish S, Pervez M, Irshad U, Fahad S, Dawar K, Alharbi SA, Ansari MJ, Datta R. Optimizing chili production in drought stress: combining Zn-quantum dot biochar and proline for improved growth and yield. Sci Rep 2024; 14:6627. [PMID: 38503869 PMCID: PMC10951368 DOI: 10.1038/s41598-024-57204-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2023] [Accepted: 03/15/2024] [Indexed: 03/21/2024] Open
Abstract
The reduction in crop productivity due to drought stress, is a major concern in agriculture. Drought stress usually disrupts photosynthesis by triggering oxidative stress and generating reactive oxygen species (ROS). The use of zinc-quantum dot biochar (ZQDB) and proline (Pro) can be effective techniques to overcome this issue. Biochar has the potential to improve the water use efficiency while proline can play an imperative role in minimization of adverse impacts of ROS Proline, functioning as an osmotic protector, efficiently mitigates the adverse effects of heavy metals on plants by maintaining cellular structure, scavenging free radicals, and ensuring the stability of cellular integrity. That's why current study explored the impact of ZQDB and proline on chili growth under drought stress. Four treatments, i.e., control, 0.4%ZQDB, 0.1 mM Pro, and 0.4%ZQDB + Pro, were applied in 4 replications following the complete randomized design. Results exhibited that 0.4%ZQDB + Pro caused an increases in chili plant dry weight (29.28%), plant height (28.12%), fruit length (29.20%), fruit girth (59.81%), and fruit yield (55.78%) over control under drought stress. A significant increment in chlorophyll a (18.97%), chlorophyll b (49.02%), and total chlorophyll (26.67%), compared to control under drought stress, confirmed the effectiveness of 0.4%ZQDB + Pro. Furthermore, improvement in leaves N, P, and K concentration over control validated the efficacy of 0.4%ZQDB + Pro against drought stress. In conclusion, 0.4%ZQDB + Pro can mitigate drought stress in chili. More investigations are suggested to declare 0.4%ZQDB + Pro as promising amendment for mitigation of drought stress in other crops as well under changing climatic situations.
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Affiliation(s)
- Misbah Hareem
- Department of Environmental Sciences, Woman University Multan, Multan, Punjab, Pakistan
| | - Subhan Danish
- Department of Soil Science, Faculty of Agricultural Sciences and Technology, Bahauddin Zakariya University, Multan, Punjab, Pakistan.
| | - Mahnoor Pervez
- Department of Zoology, Lahore College for Women University, Lahore, Pakistan
| | - Usman Irshad
- Department of Environmental Sciences, COMSATS University Islamabad Abbottabad Campus, Abbottabad, Pakistan
| | - Shah Fahad
- Department of Natural Sciences, Lebanese American University, Byblos, Lebanon.
| | - Khadim Dawar
- Department of Soil and Environmental Science, The University of Agriculture Peshawar, Peshawar, Pakistan
| | - Sulaiman Ali Alharbi
- Department of Botany and Microbiology, College of Science, King Saud University, PO Box -2455, 11451, Riyadh, Saudi Arabia
| | - Mohammad Javed Ansari
- Department of Botany, Hindu College Moradabad (Mahatma Jyotiba Phule Rohilkhand University Bareilly), Moradabad, India
| | - Rahul Datta
- Department of Geology and Pedology, Faculty of Forestry and Wood Technology, Mendel University in Brno, Zemedelska 1, 61300, Brno, Czech Republic.
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Jessup M. A Century of Heart Failure With Reduced Ejection Fraction: Mostly Drought, Followed by Rapid Progress. Circulation 2024; 149:899-901. [PMID: 38498612 DOI: 10.1161/circulationaha.123.065468] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 03/20/2024]
Affiliation(s)
- Mariell Jessup
- Emeritus Professor of Medicine, University of Pennsylvania, Philadelphia. Chief Science and Medical Officer, American Heart Association, Philadelphia, PA
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40
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Njuguna C, Tola H, Maina BN, Magambo KN, Namukose S, Kamau S, Tegegn YW. Roles of health system leadership under emergency in drought-affected districts in northeast Uganda: a mixed-method study. BMJ Open 2024; 14:e080374. [PMID: 38503408 PMCID: PMC10953004 DOI: 10.1136/bmjopen-2023-080374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 03/07/2024] [Indexed: 03/21/2024] Open
Abstract
OBJECTIVE Health system leadership plays a critical role in sustaining healthcare delivery during emergencies. Thus, we aimed to assess the contribution of health system leadership in sustaining healthcare delivery under emergency conditions based on adaptive leadership theoretical framework. DESIGN We employed a concurrent mixed-methods study approach to assess health system leadership roles during emergency. This involved a quantitative survey administered to 150 health facilities managers/service focal persons selected via multistage sampling method from 15 districts, and qualitative interviews with 48 key informants who purposively selected. PARTICIPANTS We interviewed health facility managers, services focal persons, district health officers and residential district commissioners. We also reviewed weekly emergency situation reports and other relevant documents related to the emergency response. We used structured questionnaire, observation checklist and semistructured questionnaire to collect data. We employed descriptive statistics to analyse quantitative data and thematic analysis for qualitative data. MAIN OUTCOME Health system leadership contributions in sustaining healthcare delivery during emergencies. RESULTS Health system leadership was effective in leading emergency response and ensuring the continuity of health service during emergencies. Community engagement, partners coordination and intersectoral collaboration were effectively used in the emergency response and ensuring continuity of healthcare delivery. Deployment of experienced personnel and essential medical and non-medical supplies played a critical role in the continuity of health service. Availability of incidence management teams across health system significantly contributed to health system leadership. Participation of village health teams in community engagement and information communication helped in the success of health system leadership under emergency. CONCLUSION Adaptive health system leadership played a crucial role in managing health services delivery under emergency conditions. Effective partnership coordination and collaboration across sectors, frequent information communication, building local actor capacity and implementing scheduled supportive supervisions emerged as key strategies for sustaining health services during emergencies.
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Affiliation(s)
- Charles Njuguna
- World Health Organization Country Office for Uganda, Kampala, Uganda
- Kenyatta University, School of Business, Nairobi, Nairobi, Kenya
| | - Habteyes Tola
- World Health Organization Country Office for Uganda, Kampala, Uganda
| | | | | | | | - Sarah Kamau
- Kenyatta University, School of Business, Nairobi, Nairobi, Kenya
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Elshamly AMS, Iqbal R, Elshikh MS, Alwasel YA, Chaudhary T. Chitosan combined with humic applications during sensitive growth stages to drought improves nutritional status and water relations of sweet potato. Sci Rep 2024; 14:6351. [PMID: 38491017 PMCID: PMC10943102 DOI: 10.1038/s41598-024-55904-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 02/28/2024] [Indexed: 03/18/2024] Open
Abstract
The current decline in freshwater resources presents a significant global challenge to crop production, a situation expected to intensify with ongoing climate change. This underscores the need for extensive research to enhance crop yields under drought conditions, a priority for scientists given its vital role in global food security. Our study explores the effects of using humic and chitosan treatments to alleviate drought stress during critical growth phases and their impact on crop yield and water efficiency. We employed four different irrigation strategies: full irrigation, 70% irrigation at the early vine development stage, 70% irrigation during the storage root bulking stage, and 85% irrigation across both stages, complemented by full irrigation in other periods. The plants received either humic treatments through foliar spray or soil application, or chitosan foliar applications, with tap water serving as a control. Our findings highlight that the early vine development stage is particularly vulnerable to drought, with a 42.0% decrease in yield observed under such conditions. In normal growth scenarios, foliar application of humic substances significantly improved growth parameters, resulting in a substantial increase in yield and water efficiency by 66.9% and 68.4%, respectively, compared to the control treatment under full irrigation. For sweet potatoes irrigated with 70% water at the storage root bulking stage, ground application of humic substances outperformed both foliar applications of chitosan and humic in terms of yield results. The highest tuber yield and water efficiency were attained by combining chitosan and humic ground applications, regardless of whether 70% irrigation was used at the storage root bulking stage or 85% irrigation during both the early vine development and storage root bulking stages.
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Affiliation(s)
- Ayman M S Elshamly
- Water Studies and Research Complex, National Water Research Center, Cairo, Egypt.
| | - Rashid Iqbal
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan
| | - Mohamed S Elshikh
- Department of Botany and Microbiology, College of Science, King Saud University, 11451, Riyadh, Saudi Arabia
| | - Yasmeen A Alwasel
- Department of Botany and Microbiology, College of Science, King Saud University, 11451, Riyadh, Saudi Arabia
| | - Talha Chaudhary
- Faculty of Agricultural and Environmental Sciences, Hungarian University of Agriculture and Life Sciences, Godollo, 2100, Hungary.
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Xiao F, Zhao Y, Wang X, Jian X, Yang Y. Physiological responses to drought stress of three pine species and comparative transcriptome analysis of Pinus yunnanensis var. pygmaea. BMC Genomics 2024; 25:281. [PMID: 38493093 PMCID: PMC10944613 DOI: 10.1186/s12864-024-10205-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 03/08/2024] [Indexed: 03/18/2024] Open
Abstract
Drought stress can significantly affect plant growth, development, and yield. Fewer comparative studies have been conducted between different species of pines, particularly involving Pinus yunnanensis var. pygmaea (P. pygmaea). In this study, the physiological indices, photosynthetic pigment and related antioxidant enzyme changes in needles from P. pygmaea, P. elliottii and P. massoniana under drought at 0, 7, 14, 21, 28 and 35 d, as well as 7 days after rehydration, were measured. The PacBio single-molecule real-time (SMRT) and Illumina RNA sequencing were used to uncover the gene expression differences in P. pygmaea under drought and rehydration conditions. The results showed that the total antioxidant capacity (TAOC) of P. pygmaea was significantly higher than P. massoniana and P. elliottii. TAOC showed a continuous increase trend across all species. Soluble sugar (SS), starch content and non-structural carbohydrate (NSC) of all three pines displayed a "W" pattern, declining initially, increasing, and then decreasing again. P. pygmaea exhibits stronger drought tolerance and greater recovery ability under prolonged drought conditions. Through the PacBio SMRT-seq, a total of 50,979 high-quality transcripts were generated, and 6,521 SSR and 5,561 long non-coding RNAs (LncRNAs) were identified. A total of 2310, 1849, 5271, 5947, 7710, and 6854 differentially expressed genes (DEGs) were identified compared to the control (Pp0D) in six pair-wise comparisons of treatment versus control. bHLH, NAC, ERF, MYB_related, C3H transcription factors (TFs) play an important role in drought tolerance of P. pygmaea. KEGG enrichment analysis and Gene set enrichment analysis (GSEA) analysis showed that P. pygmaea may respond to drought by enhancing metabolic processes such as ABA signaling pathway, alpha-linolenic acid. Weighted gene co-expression network analysis (WGCNA) revealed GST, CAT, LEC14B, SEC23 were associated with antioxidant enzyme activity and TAOC. This study provides a basis for further research on drought tolerance differences among coniferous species.
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Affiliation(s)
- Feng Xiao
- Institute for Forest Resources and Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, College of Forestry, Guizhou University, Guizhou, 550025, China
| | - Yang Zhao
- Institute for Forest Resources and Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, College of Forestry, Guizhou University, Guizhou, 550025, China.
| | - Xiurong Wang
- Institute for Forest Resources and Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, College of Forestry, Guizhou University, Guizhou, 550025, China
| | - Xueyan Jian
- College of Continuing Education, Yanbian University, Jilin, 133002, China
| | - Yao Yang
- Institute for Forest Resources and Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, College of Forestry, Guizhou University, Guizhou, 550025, China
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43
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Athukoralalage D, Brookes J, McDowell RW, Mosley LM. Impact of hydrological drought occurrence, duration, and severity on Murray-Darling basin water quality. Water Res 2024; 252:121201. [PMID: 38335746 DOI: 10.1016/j.watres.2024.121201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Revised: 01/17/2024] [Accepted: 01/23/2024] [Indexed: 02/12/2024]
Abstract
The severity and frequency of droughts are projected to increase globally due to climate change, but the effects of this on water quality are uncertain. The Murray-Darling Basin (MDB) is the largest river system in Australia and has been impacted by droughts of varying severity within recent decades. In this study, we assessed the influence of hydrological droughts and their characteristics (severity and duration) on water quality, utilising a long-term (1980-2017) dataset from two monitoring sites. The main drought periods, and their duration and severity, were identified using the calculated Standardised Drought Index values (SDI) from averaged monthly streamflow data. While several hydrological drought periods were identified, the longest duration and greatest severity were during the Millennium Drought (1998-2010). Nutrient loads and concentrations of Total Nitrogen and Total Phosphorus of drought and post-drought periods were significantly different. The drought period showed the lowest median and interquartile range of nutrient (total nitrogen, TN; oxidised nitrogen, NOX; total phosphorus, TP; and soluble reactive phosphorus, SRP) concentrations and loads for both sites, whereas the highest nutrient loads and concentrations were reported during the post-drought period (approx. 1 × 103 to 1 × 105 kg day-1 increase in nutrient loads). Our analysis found significant relationships between nutrient loads and SDI during droughts. The load of N and P in the initial flush post-drought increased with drought at both sites. This suggests that nutrients were retained in the landscape during the drought and released in higher loads post-drought when the catchment became wetter, the hydrology was activated, and nutrients were mobilised. Hydrology is a key driver controlling the water quality within the inter-drought period and the peak nutrient loads post-drought. The duration and the severity of droughts had a significant (p = 0.01) influence on peak TN and TP monthly loads but not cumulative loads over a 12-month period. Hydrological droughts are important factors in controlling the water quality of the MDB. Therefore, management efforts should be focused on reducing the occurrence and duration of these events, along with the implementation of catchment nutrient control measures.
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Affiliation(s)
| | - Justin Brookes
- School of Biological Sciences, University of Adelaide, Adelaide, SA, Australia
| | - Rich W McDowell
- AgResearch, Lincoln Science Centre, Lincoln, New Zealand; Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, New Zealand
| | - Luke M Mosley
- School of Biological Sciences, University of Adelaide, Adelaide, SA, Australia; School of Agriculture, Food and Wine, University of Adelaide, Adelaide, SA, Australia.
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da Silva GJF, Silva RMD, Brasil Neto RM, Silva JFCBC, Dantas APX, Santos CAG. Multi-datasets to monitor and assess meteorological and hydrological droughts in a typical basin of the Brazilian semiarid region. Environ Monit Assess 2024; 196:368. [PMID: 38489071 DOI: 10.1007/s10661-024-12461-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 02/17/2024] [Indexed: 03/17/2024]
Abstract
This study analyzed the meteorological and hydrological droughts in a typical basin of the Brazilian semiarid region from 1994 to 2016. In recent decades, this region has faced prolonged and severe droughts, leading to marked reductions in agricultural productivity and significant challenges to food security and water availability. The datasets employed included a digital elevation model, land use and cover data, soil characteristics, climatic data (temperature, wind speed, solar radiation, humidity, and precipitation), runoff data, images from the MODIS/TERRA and AQUA sensors (MOD09A1 and MODY09A1 products), and soil water content. A variety of methods and products were used to study these droughts: the meteorological drought was analyzed using the Standardized Precipitation Index (SPI) derived from observed precipitation data, while the hydrological drought was assessed using the Standardized Soil Index (SSI), the Nonparametric Multivariate Standardized Drought Index (NMSDI), and the Parametric Multivariate Standardized Drought Index (PMSDI). These indices were determined using water balance components, including streamflow and soil water content, from the Soil Water Assessment Tool (SWAT) model, and evapotranspiration data from the Surface Energy Balance Algorithm for Land (SEBAL). The findings indicate that the methodology effectively identified variations in water dynamics and drought periods in a headwater basin within Brazil's semiarid region, suggesting potential applicability in other semiarid areas. This study provides essential insights for water resource management and resilience building in the face of adverse climatic events, offering a valuable guide for decision-making processes.
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Affiliation(s)
| | | | - Reginaldo Moura Brasil Neto
- Department of Civil and Environmental Engineering, Federal University of Paraíba, João Pessoa, Paraíba, 58051-900, Brazil
| | | | - Ana Paula Xavier Dantas
- Department of Civil and Environmental Engineering, Federal University of Paraíba, João Pessoa, Paraíba, 58051-900, Brazil
| | - Celso Augusto Guimarães Santos
- Department of Civil and Environmental Engineering, Federal University of Paraíba, João Pessoa, Paraíba, 58051-900, Brazil.
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Qiao K, Zeng Q, Lv J, Chen L, Hao J, Wang D, Ma Q, Fan S. Exploring the role of GhN/AINV23: implications for plant growth, development, and drought tolerance. Biol Direct 2024; 19:22. [PMID: 38486336 PMCID: PMC10938729 DOI: 10.1186/s13062-024-00465-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Accepted: 03/06/2024] [Indexed: 03/18/2024] Open
Abstract
BACKGROUND Neutral/alkaline invertases (N/AINVs) play a crucial role in plant growth, development, and stress response, by irreversibly hydrolyzing sucrose into glucose and fructose. However, research on cotton in this area is limited. This study aims to investigate GhN/AINV23, a neutral/alkaline invertase in cotton, including its characteristics and biological functions. RESULTS In our study, we analyzed the sequence information, three-dimensional (3D) model, phylogenetic tree, and cis-elements of GhN/AINV23. The localization of GhN/AINV23 was determined to be in the cytoplasm and cell membrane. Quantitative real-time polymerase chain reaction (qRT-PCR) results showed that GhN/AINV23 expression was induced by abscisic acid (ABA), exogenous sucrose and low exogenous glucose, and inhibited by high exogenous glucose. In Arabidopsis, overexpression of GhN/AINV23 promoted vegetative phase change, root development, and drought tolerance. Additionally, the virus-induced gene silencing (VIGS) assay indicated that the inhibition of GhN/AINV23 expression made cotton more susceptible to drought stress, suggesting that GhN/AINV23 positively regulates plant drought tolerance. CONCLUSION Our research indicates that GhN/AINV23 plays a significant role in plant vegetative phase change, root development, and drought response. These findings provide a valuable foundation for utilizing GhN/AINV23 to improve cotton yield.
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Affiliation(s)
- Kaikai Qiao
- National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, 572024, Sanya, Hainan, China.
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research of Chinese Academy of Agricultural Sciences (CAAS), 455000, Anyang, Henan, China.
| | - Qingtao Zeng
- The 7th Division of Agricultural Sciences Institute, Xinjiang Production and Construction Corps, 833200, Kuitun, Xinjiang, China
| | - Jiaoyan Lv
- Anyang Academy of Agricultural Sciences, 455000, Anyang, Henan, China
| | - Lingling Chen
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research of Chinese Academy of Agricultural Sciences (CAAS), 455000, Anyang, Henan, China
| | - Juxin Hao
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research of Chinese Academy of Agricultural Sciences (CAAS), 455000, Anyang, Henan, China
| | - Ding Wang
- Anyang Meteorological Service, 455000, Anyang, Henan, China
| | - Qifeng Ma
- National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, 572024, Sanya, Hainan, China.
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research of Chinese Academy of Agricultural Sciences (CAAS), 455000, Anyang, Henan, China.
| | - Shuli Fan
- National Nanfan Research Institute (Sanya), Chinese Academy of Agricultural Sciences, 572024, Sanya, Hainan, China.
- National Key Laboratory of Cotton Bio-breeding and Integrated Utilization, Institute of Cotton Research of Chinese Academy of Agricultural Sciences (CAAS), 455000, Anyang, Henan, China.
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46
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Yoshida T, Fernie AR. Hormonal regulation of plant primary metabolism under drought. J Exp Bot 2024; 75:1714-1725. [PMID: 37712613 DOI: 10.1093/jxb/erad358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Accepted: 09/13/2023] [Indexed: 09/16/2023]
Abstract
Phytohormones are essential signalling molecules globally regulating many processes of plants, including their growth, development, and stress responses. The promotion of growth and the enhancement of stress resistance have to be balanced, especially under adverse conditions such as drought stress, because of limited resources. Plants cope with drought stress via various strategies, including the transcriptional regulation of stress-responsive genes and the adjustment of metabolism, and phytohormones play roles in these processes. Although abscisic acid (ABA) is an important signal under drought, less attention has been paid to other phytohormones. In this review, we summarize progress in the understanding of phytohormone-regulated primary metabolism under water-limited conditions, especially in Arabidopsis thaliana, and highlight recent findings concerning the amino acids associated with ABA metabolism and signalling. We also discuss how phytohormones function antagonistically and synergistically in order to balance growth and stress responses.
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Affiliation(s)
- Takuya Yoshida
- Lehrstuhl für Botanik, Technische Universität München, Emil-Ramann-Str. 4, 85354 Freising, Germany
| | - Alisdair R Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, 14476 Potsdam-Golm, Germany
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47
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Hopkins AJM, Brace AJ, Bruce JL, Hyde J, Fontaine JB, Walden L, Veber W, Ruthrof KX. Drought legacy interacts with wildfire to alter soil microbial communities in a Mediterranean climate-type forest. Sci Total Environ 2024; 915:170111. [PMID: 38232837 DOI: 10.1016/j.scitotenv.2024.170111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 01/09/2024] [Accepted: 01/10/2024] [Indexed: 01/19/2024]
Abstract
Mediterranean forest ecosystems will be increasingly affected by hotter drought and more frequent and severe wildfire events in the future. However, little is known about the longer-term responses of these forests to multiple disturbances and the forests' capacity to maintain ecosystem function. This is particularly so for below-ground organisms, which have received less attention than those above-ground, despite their essential contributions to forest function. We investigated rhizosphere microbial communities in a resprouting Eucalyptus marginata forest, southwestern Australia, that had experienced a severe wildfire four years previously, and a hotter drought eight years previously. Our aim was to understand how microbial communities are affected over longer-term trajectories by hotter drought and wildfire, singularly, and in combination. Fungal and bacterial DNA was extracted from soil samples, amplified, and subjected to high throughput sequencing. Richness, diversity, composition, and putative functional groups were then examined. We found a monotonic decrease in fungal, but not bacterial, richness and diversity with increasing disturbance with the greatest changes resulting from the combination of drought and wildfire. Overall fungal and bacterial community composition reflected a stronger effect of fire than drought, but the combination of both produced the greatest number of indicator taxa for fungi, and a significant negative effect on the abundance of several fungal functional groups. Key mycorrhizal fungi, fungal saprotrophs and fungal pathogens were found at lower proportions in sites affected by drought plus wildfire. Wildfire had a positive effect on bacterial hydrogen and bacterial nitrogen recyclers. Fungal community composition was positively correlated with live tree height. These results suggest that microbial communities, in particular key fungal functional groups, are highly responsive to wildfire following drought. Thus, a legacy of past climate conditions such as hotter drought can be important for mediating the responses of soil microbial communities to subsequent disturbance like wildfire.
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Affiliation(s)
- A J M Hopkins
- Molecular Ecology and Evolution Group, School of Science, Edith Cowan University, Joondalup, WA 6027, Australia.
| | - A J Brace
- Molecular Ecology and Evolution Group, School of Science, Edith Cowan University, Joondalup, WA 6027, Australia
| | - J L Bruce
- Molecular Ecology and Evolution Group, School of Science, Edith Cowan University, Joondalup, WA 6027, Australia
| | - J Hyde
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, WA 6151, Australia
| | - J B Fontaine
- School of Environmental and Conservation Sciences, Murdoch University, Murdoch, WA 6150, Australia
| | - L Walden
- Soil and Landscape Science, School of Molecular and Life Sciences, Curtin University, Bentley, WA 6102, Australia
| | - W Veber
- School of Environmental and Conservation Sciences, Murdoch University, Murdoch, WA 6150, Australia
| | - K X Ruthrof
- Biodiversity and Conservation Science, Department of Biodiversity, Conservation and Attractions, Kensington, WA 6151, Australia; School of Environmental and Conservation Sciences, Murdoch University, Murdoch, WA 6150, Australia
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48
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Toda Y, Sasaki G, Ohmori Y, Yamasaki Y, Takahashi H, Takanashi H, Tsuda M, Kajiya-Kanegae H, Tsujimoto H, Kaga A, Hirai M, Nakazono M, Fujiwara T, Iwata H. Reaction norm for genomic prediction of plant growth: modeling drought stress response in soybean. Theor Appl Genet 2024; 137:77. [PMID: 38460027 PMCID: PMC10924738 DOI: 10.1007/s00122-024-04565-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 01/30/2024] [Indexed: 03/11/2024]
Abstract
KEY MESSAGE We proposed models to predict the effects of genomic and environmental factors on daily soybean growth and applied them to soybean growth data obtained with unmanned aerial vehicles. Advances in high-throughput phenotyping technology have made it possible to obtain time-series plant growth data in field trials, enabling genotype-by-environment interaction (G × E) modeling of plant growth. Although the reaction norm is an effective method for quantitatively evaluating G × E and has been implemented in genomic prediction models, no reaction norm models have been applied to plant growth data. Here, we propose a novel reaction norm model for plant growth using spline and random forest models, in which daily growth is explained by environmental factors one day prior. The proposed model was applied to soybean canopy area and height to evaluate the influence of drought stress levels. Changes in the canopy area and height of 198 cultivars were measured by remote sensing using unmanned aerial vehicles. Multiple drought stress levels were set as treatments, and their time-series soil moisture was measured. The models were evaluated using three cross-validation schemes. Although accuracy of the proposed models did not surpass that of single-trait genomic prediction, the results suggest that our model can capture G × E, especially the latter growth period for the random forest model. Also, significant variations in the G × E of the canopy height during the early growth period were visualized using the spline model. This result indicates the effectiveness of the proposed models on plant growth data and the possibility of revealing G × E in various growth stages in plant breeding by applying statistical or machine learning models to time-series phenotype data.
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Affiliation(s)
- Yusuke Toda
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Goshi Sasaki
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Yoshihiro Ohmori
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Yuji Yamasaki
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
- Arid Land Research Center, Tottori University, Tottori, Japan
| | - Hirokazu Takahashi
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Hideki Takanashi
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Mai Tsuda
- Tsukuba-Plant Innovation Research Center (T-PIRC), University of Tsukuba, Tsukuba, Japan
| | | | | | - Akito Kaga
- Institute of Crop Science, NARO, Tsukuba, Japan
| | - Masami Hirai
- RIKEN Center for Sustainable Resource Science, Tsukuba, Japan
| | - Mikio Nakazono
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Toru Fujiwara
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Hiroyoshi Iwata
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan.
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49
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Devanand A, Falster GM, Gillett ZE, Hobeichi S, Holgate CM, Jin C, Mu M, Parker T, Rifai SW, Rome KS, Stojanovic M, Vogel E, Abram NJ, Abramowitz G, Coats S, Evans JP, Gallant AJE, Pitman AJ, Power SB, Rauniyar SP, Taschetto AS, Ukkola AM. Australia's Tinderbox Drought: An extreme natural event likely worsened by human-caused climate change. Sci Adv 2024; 10:eadj3460. [PMID: 38446893 PMCID: PMC10917352 DOI: 10.1126/sciadv.adj3460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Accepted: 01/29/2024] [Indexed: 03/08/2024]
Abstract
We examine the characteristics and causes of southeast Australia's Tinderbox Drought (2017 to 2019) that preceded the Black Summer fire disaster. The Tinderbox Drought was characterized by cool season rainfall deficits of around -50% in three consecutive years, which was exceptionally unlikely in the context of natural variability alone. The precipitation deficits were initiated and sustained by an anomalous atmospheric circulation that diverted oceanic moisture away from the region, despite traditional indicators of drought risk in southeast Australia generally being in neutral states. Moisture deficits were intensified by unusually high temperatures, high vapor pressure deficits, and sustained reductions in terrestrial water availability. Anthropogenic forcing intensified the rainfall deficits of the Tinderbox Drought by around 18% with an interquartile range of 34.9 to -13.3% highlighting the considerable uncertainty in attributing droughts of this kind to human activity. Skillful predictability of this drought was possible by incorporating multiple remote and local predictors through machine learning, providing prospects for improving forecasting of droughts.
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Affiliation(s)
- Anjana Devanand
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Georgina M. Falster
- ARC Centre of Excellence for Climate Extremes, The Australian National University, Canberra, ACT, Australia
- Research School of Earth Sciences, The Australian National University, Canberra, ACT, Australia
| | - Zoe E. Gillett
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Sanaa Hobeichi
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Chiara M. Holgate
- ARC Centre of Excellence for Climate Extremes, The Australian National University, Canberra, ACT, Australia
- Research School of Earth Sciences, The Australian National University, Canberra, ACT, Australia
| | - Chenhui Jin
- ARC Centre of Excellence for Climate Extremes, Monash University, Melbourne, VIC, Australia
- School of Earth, Atmosphere and Environment, Monash University, Melbourne, VIC, Australia
| | - Mengyuan Mu
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Tess Parker
- ARC Centre of Excellence for Climate Extremes, Monash University, Melbourne, VIC, Australia
- School of Earth, Atmosphere and Environment, Monash University, Melbourne, VIC, Australia
| | - Sami W. Rifai
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
- School of Biological Sciences, University of Adelaide, Adelaide, SA, Australia
| | - Kathleen S. Rome
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Milica Stojanovic
- Centro de Investigación Mariña, Universidade de Vigo, Environmental Physics Laboratory (EPhysLab), Campus As Lagoas s/n, Ourense 32004, Spain
| | - Elisabeth Vogel
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Water Research Centre, School of Civil Engineering, University of New South Wales, Sydney, NSW, Australia
- Melbourne Climate Futures, The University of Melbourne, Parkville, VIC, Australia
| | - Nerilie J. Abram
- ARC Centre of Excellence for Climate Extremes, The Australian National University, Canberra, ACT, Australia
- Research School of Earth Sciences, The Australian National University, Canberra, ACT, Australia
| | - Gab Abramowitz
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Sloan Coats
- Department of Earth Sciences, University of Hawaiʻi at Mānoa, Honolulu, HI, USA
| | - Jason P. Evans
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Ailie J. E. Gallant
- ARC Centre of Excellence for Climate Extremes, Monash University, Melbourne, VIC, Australia
- School of Earth, Atmosphere and Environment, Monash University, Melbourne, VIC, Australia
| | - Andy J. Pitman
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Scott B. Power
- ARC Centre of Excellence for Climate Extremes, Monash University, Melbourne, VIC, Australia
- School of Earth, Atmosphere and Environment, Monash University, Melbourne, VIC, Australia
- Centre for Applied Climate Sciences, University of Southern Queensland, Toowoomba, QLD, Australia
- Climate Services International, Oakleigh, Melbourne, VIC, Australia
| | | | - Andréa S. Taschetto
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
| | - Anna M. Ukkola
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, Australia
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50
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Wang Z, Zhou J, Zou J, Yang J, Chen W. Characterization of PYL gene family and identification of HaPYL genes response to drought and salt stress in sunflower. PeerJ 2024; 12:e16831. [PMID: 38464756 PMCID: PMC10924776 DOI: 10.7717/peerj.16831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Accepted: 01/04/2024] [Indexed: 03/12/2024] Open
Abstract
In the context of global climate change, drought and soil salinity are some of the most devastating abiotic stresses affecting agriculture today. PYL proteins are essential components of abscisic acid (ABA) signaling and play critical roles in responding to abiotic stressors, including drought and salt stress. Although PYL genes have been studied in many species, their roles in responding to abiotic stress are still unclear in the sunflower. In this study, 19 HaPYL genes, distributed on 15 of 17 chromosomes, were identified in the sunflower. Fragment duplication is the main cause of the expansion of PYL genes in the sunflower genome. Based on phylogenetic analysis, HaPYL genes were divided into three subfamilies. Members in the same subfamily share similar protein motifs and gene exon-intron structures, except for the second subfamily. Tissue expression patterns suggested that HaPYLs serve different functions when responding to developmental and environmental signals in the sunflower. Exogenous ABA treatment showed that most HaPYLs respond to an increase in the ABA level. Among these HaPYLs, HaPYL2a, HaPYL4d, HaPYL4g, HaPYL8a, HaPYL8b, HaPYL8c, HaPYL9b, and HaPYL9c were up-regulated with PEG6000 treatment and NaCl treatment. This indicates that they may play a role in resisting drought and salt stress in the sunflower by mediating ABA signaling. Our findings provide some clues to further explore the functions of PYL genes in the sunflower, especially with regards to drought and salt stress resistance.
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Affiliation(s)
- Zhaoping Wang
- China West Normal University, College of Life Sciences, Nanchong, Sichuan, China
| | - Jiayan Zhou
- China West Normal University, College of Life Sciences, Nanchong, Sichuan, China
| | - Jian Zou
- China West Normal University, College of Life Sciences, Nanchong, Sichuan, China
| | - Jun Yang
- China West Normal University, College of Life Sciences, Nanchong, Sichuan, China
| | - Weiying Chen
- China West Normal University, College of Life Sciences, Nanchong, Sichuan, China
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