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Jiga L, Romanescu V, Jandali Z, Bürger H. Vascularized Bone Grafts from the Lateral Femoral Condyle for the Treatment of Avascular Lunate Necrosis (Kienböck's). Indian J Orthop 2023; 57:1083-1091. [PMID: 37384003 PMCID: PMC10293499 DOI: 10.1007/s43465-023-00877-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Accepted: 03/16/2023] [Indexed: 06/30/2023]
Abstract
Background Avascular necrosis of the lunate (Kienböck's disease) is rare and one of the main causes of progressive painful arthritis, requiring surgical intervention. Various approaches have shown benefits in treating Kienbock's disease but with limitations. The article aims to analyze the functional outcome using lateral femoral condyle free vascularized bone grafts (VBGs) as the first choice of treatment for Kienböck`s. Materials and methods This was a retrospective analysis of 31 patients with Kienbock's who had microsurgical revascularization or reconstruction of the lunate between 2016 and 2021 using either corticocancellous or osteochondral VBGs from the lateral femoral condyle. The characteristics of lunate necrosis, choice of VBG and postoperative functional outcome were reviewed. Results Corticocancellous VBGs were used in 20 patients (64.5%), while osteochondral VBGs in 11 patients (35.4%). The lunate was reconstructed in 11 patients, revascularized in 19 patients, and one patient received augmentation of a luno-capitate arthrodesis with a corticocancellous graft. We noted postoperative irritation of the median nerve (n = 3) and screw loosening requiring removal (n = 1) as minor complications. All patients had complete graft healing at eight-month follow-up and acceptable functional outcomes. Conclusions Free VBG from the lateral femoral condyle represent a reliable method of lunate revascularisation or reconstruction in advanced Kienböck's. Their main advantages are the constant vascular anatomy, straightforward graft harvesting technique and possibility to harvest several graft types according to the requirements at the donor site. Postoperatively, the patients become pain-free and have an acceptable functional outcome.
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Dezulovic M, Hönck K, Palle W, Bürger H. [Hematogenous osteomyelitis due to clavicular fracture : A rare complication after conservative treatment]. Unfallchirurg 2022; 125:915-920. [PMID: 35175405 DOI: 10.1007/s00113-022-01149-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/12/2022] [Indexed: 11/29/2022]
Abstract
We present a case of a nondislocated clavicular fracture that was conservatively treated for 4 weeks with a sling. The patient was a smoker and suffered from type 2 diabetes mellitus. After 2 months a suppurative infection occurred due to an escalation based on a clavicular osteomyelitis. Through antibiotic treatment and an aggressive surgical approach the infection was cured but ended up with a painful malunion of the clavicle. The bone reconstruction was achieved with a long locking plate with an additional vascularized medial femoral condyle free flap. After 18 months the patient was subjectively very satisfied with the outcome, had no pain and excellent functional results in the Constant Murley and DASH (Disabilities of Arm, Shoulder and Hand) scores. The X‑ray assessment showed full bone union.
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Gebhardt F, Bürger H, Brandt B. Modulation of EGFR Gene Transcription by a Polymorphic Repetitive Sequence – a Link between Genetics and Epigenetics. Int J Biol Markers 2018; 15:105-10. [PMID: 10763151 DOI: 10.1177/172460080001500120] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
The epidermal growth factor receptor (EGFR) plays a crucial role in growth, differentiation and motility of normal as well as tumor cells. The transduction of extracellular signals to the cytoplasm via the receptor not only depends on ligand binding, but is also determined by the receptor density on the cell surface. Therefore, with regard to cancer diagnosis and therapeutic approaches targeting EGFR it is important to know how the expression level of EGFR is controlled. We found that transcription activity declines with increasing numbers of CA dinucleotides of a highly polymorphic CA repeat in the first intron of the epidermal growth factor receptor gene. In vivo data from cultured cell lines support these findings, although other regulation mechanisms can compensate this effect. In addition, we showed that RNA elongation terminates at a site closely downstream of the simple sequence repeat (SSR) and that there are two separate major transcription start sites. Model calculations for the helical DNA conformation revealed a high bendability in the EGFR polymorphic region, especially if the CA stretch is extended. These data suggest that the CA-SSR can act like a joint, bringing the promoter in proximity to a putative repressor protein bound downstream of the CA-SSR. The data indicate that this polymorphism may be a marker for cancer, linking genetic and epigenetic risk factors. Furthermore, in breast cancer, heterozygous tumors with short CA-SSR showed an elevated EGFR-expression in contrast to tumours with longer CA-SSR. Tumours with loss of heterozygosity in intron 1 of egfr revealed an increased EGFR expression if the longer allele was lost. Moreover, decreased EGFR gene levels were significantly correlated with poor prognosis in breast cancer.
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Neuwirth M, Bürger H, Palle W, Rab M. One-stage reconstruction of isolated and combined tendon defects with the vascularized adductor magnus tendon graft: Surgical technique and preliminary results. J Plast Reconstr Aesthet Surg 2016; 69:928-35. [PMID: 27056634 DOI: 10.1016/j.bjps.2016.02.014] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2015] [Revised: 01/01/2016] [Accepted: 02/21/2016] [Indexed: 11/15/2022]
Abstract
INTRODUCTION Secondary reconstructions of isolated and combined tendon defects are still a challenge for plastic surgeons. Due to its reliable anatomy, reconstructive potential and low donor-site morbidity, the medial femoral condyle is an ideal area for harvesting isolated and combined tendon flaps. This study evaluates our preliminary results with the vascularized adductor magnus tendon flap. PATIENT AND METHODS The study included six patients who received a vascularized tendon flap (upper extremity: three patients; lower extremity: three patients) from 2011 to 2015. For three patients, the adductor magnus tendon was used as a single flap; for the other three patients, the tendon was included in a composite flap. A retrospective chart review provided the patients' demographic data, surgical details and the post-operative course. The further objective and patient-reported outcome was evaluated with a long-term follow-up. RESULTS All of the free vascularized flaps healed without complications and with good vascularization upon duplex ultrasonography. One patient did, however, require revision surgery in the late post-operative course. At the end point, all patients showed good functional results without any donor-site morbidity. CONCLUSION For carefully selected isolated and combined tendon defects on the upper and lower extremities, the vascularized adductor magnus tendon flap provides a reliable and versatile method for microsurgical reconstruction.
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Cserni G, Wells CA, Kaya H, Regitnig P, Sapino A, Floris G, Decker T, Foschini MP, van Diest PJ, Grabau D, Reiner A, DeGaetano J, Chmielik E, Cordoba A, Andreu X, Zolota V, Charafe-Jauffret E, Ryska A, Varga Z, Weingertner N, Bellocq JP, Liepniece-Karele I, Callagy G, Kulka J, Bürger H, Figueiredo P, Wesseling J, Amendoeira I, Faverly D, Quinn CM, Bianchi S. Consistency in recognizing microinvasion in breast carcinomas is improved by immunohistochemistry for myoepithelial markers. Virchows Arch 2016; 468:473-81. [DOI: 10.1007/s00428-016-1909-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2015] [Revised: 08/24/2015] [Accepted: 01/14/2016] [Indexed: 11/29/2022]
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Focke C, Bürger H, Korsching E, Gläser D, Finsterbusch K, Decker T. P044 Interlaboratory variability of Ki67-labelling index in breast cancer tissue microarrays. Breast 2015. [DOI: 10.1016/s0960-9776(15)70094-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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Betzel M, Bürger H, Rahner A. Fourier Transform IR Spectra and Rovibrational Investigation of Monoisotopic H3
116Sn35Cl, H3
116Sn79Br and H3
116SnI in the υ6 Region. ACTA ACUST UNITED AC 2014. [DOI: 10.1515/zna-1986-0805] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Fourier transform infrared spectra in the υ6 region of the unstable monoisotopic species H3
116Sn35Cl, H3
116Sn79Br and H3
116SnI have been recorded with a solution of 0.04 cm-1 (0.12 cm-1 for H3SnI). Rotational J and K structure of the υ6 fundamental has been resolved for H3SnCl and H3SnBr, while Q branches were measured for H3SnI. The hot bands (υ3 + υ6) - υ3 and 2υ6
±2 - υ6
±1 have been identified. A rovibrational analysis has been performed, and the following band centers (for given A0 values) have been determined: H3
116Sn35Cl 488.786(2), H3
116Sn79Br 473.493(2) and H3
116SnI 453.680(9) cm-1.
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Brauer DJ, Bürger H, Chebude Y, Pawelke G. A Diazenidoborate: Formation and Structure of Cs[(CF3)3BN=NCF3]. ACTA ACUST UNITED AC 2014. [DOI: 10.1515/znb-2000-3-407] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Cs[(CF3)3BNH2] reacts with CF3NO to form cesium trans-trifluoromethyldiazenido-tris(trifluoromethyl) borate Cs[(CF3)3BN=NCF3] (2), the structure of which has been investigated by single-crystal X-ray diffraction. The diazene nature of the anion is confirmed by the length of the N=N bond, 1.231(6) Å, and the size of the N-N-B angle, 115.5(4)° - the B-N bond length being 1.559(7) A. Compound 2 is hitherto the first diazenidoborate which has been fully characterized
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Abstract
Fourier transform infrared spectra of C1F and BrF have been measured with a resolution of 0.04 cm-1 in the region of the fundamental and First overtone with an accuracy of 2 and 4 x 10-3 cm-1, respectively. The rotational structure was resolved up to J" = 58/62 (ClF/BrF), and υo values have been obtained from rotational analyses o f the υ 1 ← 0, 2 ← 1, 2 ← 0 and. in part, 3 ← 1 and 3 ← 0 vibrational bands. These have been employed to obtain the hitherto most accurate ωe, ωeχe and (for C1F) ωeγe values. From the rotational analyses, Be, αe, γe, De and ße have been derived.
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Bürger H, Cichon J, Ruoff A. Notizen: Schwingungsspektren und Kraftkonstanten symmetrischer Kreisel. VIII. Raman- und IR-Spektren von H3SiBr und D3SiBr / Raman and Infrared Spectra of H3SiBr and D3SiBr. ZEITSCHRIFT FUR NATURFORSCHUNG SECTION B-A JOURNAL OF CHEMICAL SCIENCES 2014. [DOI: 10.1515/znb-1971-1024] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Abstract
The bending fundamental bands of HCCCN, υ5 and υ6, have been recorded in the region from 470 to 700 cm-1 with a resolution of 0.04 cm "' using an FT spectrometer. The band centers have been determined precisely; υ5 = 663.2220(10) and υ6 = 498.8022(10) cm-1 . From the obtained effective rotational constants, the sign o f the /-type doubling constants has been determined to be positive for the υ5 = 1 and υ6 = 1 vibrational states.
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Focke CM, Gläser D, Finsterbusch K, Bürger H, Korsching E, Berghäuser KH, Hinrichs B, Krause U, Lorenzen J, Packeisen J, van Diest PJ, Decker T. Abstract P3-05-09: Interlaboratory variability of Ki67 labeling index in breast cancer tissue microarrays. Cancer Res 2013. [DOI: 10.1158/0008-5472.sabcs13-p3-05-09] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Objective: Assessment of tumor proliferation using the Ki67 labeling index (Ki67-LI) is increasingly recommended for prognostication and adjuvant chemotherapy decisions in breast cancer. Our aim was to investigate interlaboratory variance of Ki67-LI results using TMA and centralised assessment to exclude preanalytic influences and postanalytic variance, respectively.
Methods: Nine pathology laboratories (8 German and 1 Dutch) performed Ki67 staining of a TMA slide according to their routine in house protocol (including internal and external quality assurance). 40 samples per lab were centrally analyzed. The Ki67-LI was calculated after counting first all tumor cells and subsequently all Ki67 positive tumor cells of each sample regardless of staining intensity. For each tissue sample we evaluated the range of Ki67-LIs between different labs. Further 20 labs of the German Breast Screening Pathology Initiative will participate in 2013.
Results: The range of Ki67-LIs between the labs was: 1-5% in 4 (10%), 6-10% in 6 (15%), 11-15% in 7 (17,5%), 16-20% in 2 (5%), 21-25% in 7 (17%), 26-30% in 4 (10%), 31-35% in 1 (1%), 36-40% in 4 (10%), 41-45% in 2 (5%), 46-50 in 0 (0%) and >50% in 3 samples (7%), respectively. Thus, in 35% of results of the 9 labs (26 of the 40 TMA specimens) the Ki67-LI differed by more than 25%. The analysis of variance (ANOVA) came out with F = 4.24 which is much larger than the critical F value of 1.97 for these study results (p = 7.74902E-05). This means that the observed interlaboratory variance of 4.24 is systematic and not due to sampling error. The respective standard deviation is 33.4%.
Conclusion: In a setting strictly standardised in terms of preanalytic influences by using TMA and postanalytic variance by centralised quantification, Ki67-LI seems to be heavily influenced by laboratory-specific analytic variables. Taking this into consideration, there may be a risk of prognostic or predictive misclassification in some breast cancer patients in daily practice.
Citation Information: Cancer Res 2013;73(24 Suppl): Abstract nr P3-05-09.
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Freche S, Esmer E, Delank KS, Bürger H, Juch F, Wohlrab D. [Arthropathia ochronotica: a rare cause of early joint degeneration]. Dtsch Med Wochenschr 2013; 138:1509-12. [PMID: 23860680 DOI: 10.1055/s-0033-1343304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
HISTORY AND ADMISSION FINDINGS A 70-year-old deaf-mute women suffered from progressive chronic pain of the right hip joint caused by destructive osteoarthritis of the hip. INVESTIGATIONS In addition to painfully restricted range of motion of the right hip joint the clinical examination showed a bluish-black pigmentation of the ear-cartilage and the sclera. TREATMENT AND COURSE A total endoprosthetic replacement of the right hip joint was performed. During surgery, blackening of the hip joint capsule and cartilage was found. Histological, the diagnosis of an ochronosis was confirmed. Discoloration after exposure of urine to air supported the diagnosis. Based on extensive internal medical examination relevant cardiac changes were excluded. CONCLUSION Ochronosis (arthropathia ochronotica) is a rare entity which can be identified by a visual diagnosis. Early diagnosis can provide crucial information for the prognosis. Additionally, an interdisciplinary treatment concept should be established because of the early onset of degenerative changes at the skeletal system and pathological changes at internal organs. With suspicion on an ochronosis extended internal examinations are recommended in order to avoid complications.
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Gaggl AJ, Bürger H, Chiari FM. Reconstruction of the nose with a new double flap technique: microvascular osteocutaneous femur and microvascular chondrocutaneous ear flap--first clinical results. Int J Oral Maxillofac Surg 2012; 41:581-6. [PMID: 22391108 DOI: 10.1016/j.ijom.2012.02.001] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2010] [Revised: 10/26/2011] [Accepted: 02/02/2012] [Indexed: 11/18/2022]
Abstract
This study describes a new microvascular flap combination from the medial femur and ear to reconstruct the nose after subtotal resection and presents the first clinical results. In four patients a squamous cell carcinoma of the nose was registered. In three patients this was diagnosed for the first time while in the fourth patient it was the second relapse after two resections and local flap surgery. In every case, tumour resection ended up in an extended defect of the nose, cheek and upper lip region. For skeletal reconstruction and the inner lining of the nose, a microvascular osteocutaneous femur flap was used. After reconstructing the nasal skeleton, the remaining defect was covered by a microvascular composite flap from the left ear and preauricular region. Both flap pedicles were anastomosed to the facial vein and artery. In every case, the flaps healed without complications. There was no tumour relapse. 12 months after reconstruction, minor surgical corrections were made. The patients showed a satisfying functional and aesthetic result. The combination of a microvascular osteocutaneous femur flap and a microvascular ear flap can be used successfully for reconstructing the nose after subtotal resection.
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Buerfeind A, Bürger H, Schlüter-Brust K, Eysel P, Delank KS. [Gorham-Stout syndrome (GSS) with fulminant aseptic osteonecrosis of the shoulder]. DER ORTHOPADE 2011; 39:1003-8. [PMID: 20714707 DOI: 10.1007/s00132-010-1638-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report here a case of the rare Gorham-Stout syndrome (GSS) of the humerus. GSS is a disease in the course of which spontaneous idiopathic osteolysis occurs. We describe a case of a 46-year-old business economist who suffered an inadequate trauma and within 3 weeks developed self-limited idiopathic osteolysis of the left humerus head, also affecting the rotator cuff. This could be diagnosed especially on the basis of histopathological findings. Hereupon we indicated operative repair by means of inverted shoulder joint endoprosthesis.
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Perrin A, Bertseva E, Flaud JM, Collet D, Bürger H, Masiello T, Blake TA. High resolution infrared study of the 2ν9and ν4bands of10BF2OH and11BF2OH: evidence of large amplitude effects for the OH-torsion and OH-bending modes in the 92and 41excited states. Mol Phys 2010. [DOI: 10.1080/00268970701426992] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Breidung J, Bürger H, Senzlober M, Thiel W. The Vibrational Spectrum of Fluorochloroethyne FCCC1: Ab Initio Calculations and High Resolution Infrared Studies. ACTA ACUST UNITED AC 2010. [DOI: 10.1002/bbpc.19950990308] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Gaggl A, Bürger H, Virnik S, Chiari F. An intraoral anastomosing technique for microvascular bone flaps in alveolar ridge reconstruction. Int J Oral Maxillofac Surg 2009; 38:921-7. [DOI: 10.1016/j.ijom.2009.03.722] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2008] [Revised: 12/14/2008] [Accepted: 03/23/2009] [Indexed: 11/16/2022]
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19
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Witt H, Bürger H. Der Wert der Diuresepyelographie. ROFO-FORTSCHR RONTG 2009. [DOI: 10.1055/s-0029-1228035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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20
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Bürger H. Basal, luminal and myoepithelial cells: immunophenotypical and molecular characterization. Geburtshilfe Frauenheilkd 2009. [DOI: 10.1055/s-0028-1121880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
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Fayt A, Willaert F, Demaison J, Starck T, Mäder H, Pawelke G, Mkadmi E, Bürger H. Fourier transform microwave spectrum of HCCC15N and global analysis of the high resolution infrared and rotational spectra up to 1700cm−1. Chem Phys 2008. [DOI: 10.1016/j.chemphys.2008.02.041] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Coudert LH, Tine M, N’Gom H, Bürger H. Local mode behavior in H2Te. J Chem Phys 2007; 127:134304. [DOI: 10.1063/1.2768949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Gaggl A, Bürger H, Müller E, Chiari FM. A combined anterolateral thigh flap and vascularized iliac crest flap in the reconstruction of extended composite defects of the anterior mandible. Int J Oral Maxillofac Surg 2007; 36:849-53. [PMID: 17587546 DOI: 10.1016/j.ijom.2007.04.012] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2006] [Revised: 04/24/2007] [Accepted: 04/25/2007] [Indexed: 11/21/2022]
Abstract
The technique of lower anterior facial reconstruction using a combination of an anterolateral thigh flap (ALTF) and a microvascular iliac crest flap is described and the results of 18 cases are reported. Eleven patients suffered recurrence after surgery and radiotherapy of oral squamous cell carcinoma of the lower face. These patients underwent a second surgery and reconstruction. In seven patients reconstruction was performed during primary surgical therapy, followed by postoperative radiotherapy. The pedicle of the ALTF was used for elongation of the iliac crest pedicle. There were no problems with the pedicle length and anastomoses even in patients who had received previous surgery and irradiation of the neck. There was no flap loss. There were no severe postoperative complications. One patient had distant metastases 18 months postoperatively. In all other patients there was no tumour recurrence or metastasis within 10-43 months of follow-up. The ALTF and vascularized iliac bone flap combination is useful in reconstruction of the lower face. The main advantage is the elongation of the iliac flap pedicle by the ALTF pedicle in patients with previous surgery in the neck.
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Hörnig-Franz I, Kahl BC, Tebbe W, Kersting C, Bürger H, Nolte K, Becker K, Bulla M, Debus O, Rabe H, Harms E. Nekrotisierende Pneumonie mit Staphylococcus aureus (pvl-Gen positiv). Monatsschr Kinderheilkd 2007. [DOI: 10.1007/s00112-005-1105-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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25
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Kemming D, Vogt U, Tidow N, Schlotter CM, Bürger H, Helms MW, Korsching E, Granetzny A, Boseila A, Hillejan L, Marra A, Ergönenc Y, Adigüzel H, Brandt B. Whole genome expression analysis for biologic rational pathway modeling: application in cancer prognosis and therapy prediction. Mol Diagn Ther 2006; 10:271-80. [PMID: 17022690 DOI: 10.1007/bf03256202] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Using semi-quantitative microarray technology, almost every one of the approximately 30 000 human genes can be analyzed simultaneously with a low rate of false-positives, a high specificity, and a high quantification accuracy. This is supported by data from comparative studies of microarrays and reverse-transcription PCR for established cancer genes including those for epidermal growth factor receptor (EGFR), human epidermal growth factor receptor-2 (HER2/ERBB2), estrogen receptor (ESR1), progesterone receptor (PGR), urokinase-type plasminogen activator (PLAU), and plasminogen activator inhibitor-1 (SERPINE1). As such, semi-quantitative expression data provide an almost completely comprehensive background of biological knowledge that can be applied to cancer diagnostics. In clinical terms, expression profiling may be able to provide significant information regarding (i) the identification of high-risk patients requiring aggressive chemotherapy; (ii) the pathway control of therapy predictive parameters (e.g. ESR1 and HER2); (iii) the discovery of targets for biologically rational therapeutics (e.g. capecitabine and trastuzumab); (iv) additional support for decisions about switching therapy; (v) target discovery; and (vi) the prediction of the course of new therapies in clinical trials. In conclusion, whole genome expression analysis might be able to determine important genes related to cancer progression and adjuvant chemotherapy resistance, especially in the context of new approaches involving primary systemic chemotherapy. In this review, we will survey the current progress in whole genome expression analyses for cancer prognosis and prediction. Special emphasis is given to the approach of combining biostatistical analysis of expression data with knowledge of biochemical and genetic pathways.
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