Mutational spectrum and geno-phenotype correlation in Chinese families with hereditary angioedema

BACKGROUND

Hereditary angioedema is a rare autosomal dominant disease, and its correlation between genotype and phenotype seems not to exist. So far, there are very few studies on Chinese population. We aimed to establish a Chinese genetic database of hereditary angioedema and investigated the potential correlation between genotype and phenotype.

METHOD

All the eight exons and intron-exon boundaries of C1 inhibitor gene were detected in 48 unrelated families with HAE. The correlations between genotype and clinical parameters were evaluated by R statistical software.

RESULTS

Thirty-five different mutations (25 of them were novel) and 7 SNPs (3 of them were novel) were identified. Significant difference was found in the level of C1 inhibitor antigen (P = 0.01793) between different groups of mutational types. The correlation between different groups of mutational types and the level of C1 inhibitor antigen (0.5047, P = 0.00027) was significant. The different groups of mutational types showed neither difference nor correlations of clinical parameters (severity score and the level of C1 inhibitor function).

CONCLUSION

It appears that nonsense, frameshift, and mutations on Arg466 can cause lower level of C1 inhibitor antigen than missense and in-frame mutations; however, it does not affect severity of symptoms.

Dynamic modeling of biodegradation and volatilization of hazardous aromatic substances in aerobic bioreactor

The aerobic biological process is one of the best technologies available for removing hazardous organic substances from industrial wastewaters. But in the case of volatile organic compounds (benzene, toluene, ethylbenzene, p-xylene, naphthalene), volatilization can contribute significantly to their removal from the liquid phase. One major issue is to predict the competition between volatilization and biodegradation in biological process depending on the target molecule. The aim of this study was to develop an integrated dynamic model to evaluate the influence of operating conditions, kinetic parameters and physical properties of the molecule on the main pathways (biodegradation and volatilization) for the removal of Volatile Organic Compounds (VOC). After a comparison with experimental data, sensitivity studies were carried out in order to optimize the aerated biological process. Acclimatized biomass growth is limited by volatilization, which reduces the bioavailability of the substrate. Moreover, the amount of biodegraded substrate is directly proportional to the amount of active biomass stabilized in the process. Model outputs predict that biodegradation is enhanced at high SRT for molecules with low H and with a high growth rate population. Air flow rate should be optimized to meet the oxygen demand and to minimize VOC stripping. Finally, the feeding strategy was found to be the most influential operating parameter that should be adjusted in order to enhance VOC biodegradation and to limit their volatilization in sequencing batch reactors (SBR).

Imaging the propagation of viruses

The propagation of viruses in a growing plaque has been measured using a digital image acquisition and analysis system. Plaques of phage T7 incubated at 37 degrees C and illuminated against a dark field emerged as dark growing spots against a background of host bacteria. Images of the growth were acquired using a charge-coupled device (CCD) camera at 1-h intervals over 24 h. The first 10 h of plaque development coincided with rapid growth of the agar-immobilized Escherichia coli host, measured as a reduction in gray value. Following this period, the average radial velocity of plaque growth remained constant at 0.059 mm/h while the standard deviation about this velocity increased. These results suggest the suitability of the system for spatially resolving the dynamics of viral evolution during plaque growth. (c) 1996 John Wiley & Sons, Inc.

Reactive gas environment induced structural modification of noble-transition metal alloy nanoparticles

Noble-transition metal (noble=Pt,Au; transition=Co,Ni,Cu) alloy particles with sizes of about 5 nm have been studied by in situ high-energy x-ray diffraction while subjected to oxidizing (O(2)) and reducing (H(2)) gas atmospheres at elevated temperatures. The different gas atmospheres do not affect substantially the random alloy, face-centered-cubic structure type of the particles but do affect the way the metal atoms pack together. In an O(2) atmosphere, atoms get extra separated from each other, whereas, in an H(2) atmosphere, they come closer together. The effect is substantial, amounting to 0.1 Å difference in the first neighbor atomic distances, and concurs with a dramatic change of the particle catalytic properties. It is argued that such reactive gas induced "expansion shrinking" is a common phenomenon that may be employed for the engineering of "smart" nanoparticles responding advantageously to envisaged gas environments.

Sensitivity of Phytophthora capsici on Vegetable Crops in Georgia to Mandipropamid, Dimethomorph, and Cyazofamid

Phytophthora blight, caused by Phytophthora capsici, is a serious disease in vegetable production, and selective use of fungicides continues to be a significant component of disease management programs. The effect of three chemical compounds-mandipropamid, dimethomorph, and cyazofamid-on asexual stages of P. capsici collected from bell pepper and cucurbits in Georgia was assessed in this study. Forty isolates of P. capsici were determined to be sensitive to mandipropamid and dimethomorph based on mycelial growth, zoospore germination, and sporangial production. Concentrations that were 50% effective (EC₅₀ values) of mandipropamid that inhibited mycelial growth, zoospore germination, and sporangial production of the isolates averaged 0.03, 5.70, and 0.02 μg/ml, respectively. EC₅₀ values of dimethomorph in inhibiting mycelial growth, zoospore germination, and sporangial production averaged 0.24, 0.10, and 0.46 μg/ml, respectively. The majority of isolates were either resistant or intermediately sensitive to cyazofamid at 500 μg/ml or lower concentrations based on mycelial growth or sporangial production, although all the isolates were sensitive to this compound based on zoospore germination, with an average EC₅₀ of 0.04 μg/ml. The results indicated that P. capsici populations in Georgia have not developed resistance to mandipropamid and dimethomorph whereas, for the majority of the isolates, certain asexual stages were resistant to cyazofamid.

Limited grain growth and chemical ordering during high-temperature sintering of PtNiCo nanoparticle aggregates

High-temperature sintering of ternary Pt(x)Ni(100-x-y)Co(y) (x = 28-44%, y = 40-54%) nanoparticles of interest in catalysis was studied in situ and in real-time with synchrotron-based x-ray diffraction. For the first time we were able to experimentally capture the early stage of the thermal treatment, and found the nanoparticles to undergo an unusual two-step coalescence process that involves transient growth and restructuring of the nanoparticles. The coalescence process is accompanied by lattice contraction, likely due to composition evolution towards a random alloy. In the late stage of sintering, evidence was found for self-limited grain growth and L1(0) chemical ordering. The order-disorder transition temperature was found to be around 800 °C in all four ternary alloy compositions studied. Fitting of the experimental data with the model for grain growth with size-dependent impediment leads to an activation energy for mass transport of about 100 kJ mol(-1), and may be used as a predictive tool to estimate particle size as a function of heat treatment temperature and duration.

Effect of greyscale liquid crystal displays of different resolutions on observer performance during detection of small solitary pulmonary nodules

OBJECTIVE

The aim of this study was to evaluate the effect of monochrome liquid crystal displays (LCDs) with different resolutions on observer performance during detection of small solitary pulmonary nodules.

METHODS

Chest images of digital radiography were selected online from the hospital's picture archiving and communication system. Of the 164 images selected, small solitary non-calcified pulmonary nodules were present in 63 images and absent in 101 images. Observer performance was assessed among 3 extremely experienced, 3 very experienced and 3 moderately experienced radiologists, who independently interpreted these images on 2, 3 and 5 megapixel greyscale LCDs. A five-point confidence level rating scale was used to represent the presence of nodules: definite absence, probable absence, indetermination, probable presence and definite presence. The observers were requested to rank each image on the given display according to the presence of the pulmonary nodule. Observer performance was analysed in terms of receiver operating characteristics (ROCs).

RESULTS

The areas under the ROC curves which represented the observer performance for the 2, 3 and 5 megapixel LCDs were found to be 0.705, 0.722 and 0.764, respectively, for the extremely experienced radiologists; 0.687, 0.712 and 0.721, respectively, for the very experienced radiologists; and 0.689, 0.696 and 0.711, respectively, for the moderately experienced radiologists. These differences were not statistically significant.

CONCLUSION

The observer performances for detection of small solitary non-calcified pulmonary nodules by radiologists with varying degrees of experience were comparable between the 2, 3 and 5 megapixel monochrome LCDs.

Expression and characterization of a recombinant Cry1Ac crystal protein fused with an insect-specific neurotoxin ω-ACTX-Hv1a in Bacillus thuringiensis

In order to assess possible enhancement of biopesticide activity, the fusion gene of crystal protein gene cry1Ac with the insect-specific neurotoxin ω-ACTX-Hv1a gene and egfp was expressed in Bacillus thuringiensis acrystalliferous strain Cry-B under the control of the native gene expression system. The fusion recombinant Cry-B(1Ac-ACTX-EGFP) generally produced two or three small crystal-like inclusion bodies in each cell and the GFP signal could be clearly observed. A 166 kDa full-length fusion protein was identified by immunoblot analysis. Virulence of the fusion inclusions was at least fivefold higher toward larvae of Spodoptera exigua. These results demonstrated that a foreign protein could be expressed and accumulate as parasporal inclusions in B. thuringiensis by C-terminal fusion with the native endotoxin while retaining partial insecticidal activity.

First Report of Root Rot Caused by Fusarium solani on Benincasa hispida in the United States

Root rot was observed on wax gourd (Benincasa hispida (Thunb.) Cogn.) cv. Black Giant in August 2010 in a commercial vegetable farm in southern Georgia. Approximately 5% of the plants were affected and infected roots turned light to dark brown with partial or entire roots affected and the lower leaves became wilted. Symptomatic roots from six plants were surface sterilized with 0.6% sodium hypochlorite and plated on potato dextrose agar (PDA) medium. Pure cultures had white mycelia and spore masses and were obtained from all six plants by subculturing hyphal tips onto PDA. One- to two-celled, oval- to kidney-shaped microconidia and cylindrical macroconidia with two or three cells plus apical and basal cell were produced, which averaged 12.5 × 4 μm and 28 × 4.5 μm, respectively. Microconidia were abundant and macroconidia were sparse on PDA. Single-spore isolates were obtained and identified as a Fusarium sp. by PCR analysis with primers ITS-Fu-f and ITS-Fu-r (1). Genomic DNA of two isolates obtained from different plants was extracted and a portion of the translation elongation factor 1-α (TEF) gene of the isolates was amplified and sequenced (3). When compared with sequences available in the GenBank database, DNA sequences of the two isolates (GenBank Accession No. JF928376) shared 100% sequence identity with F. solani strain FRC S1734 (GenBank Accession No. DQ247527). The fungus was identified as F. solani (Mart.) Sacc. based on molecular analysis and morphological characteristics (2). Oat grains were separately infected with two isolates, BG2a and BG6, and used to inoculate healthy, 3-week-old wax gourd seedlings (cv. Black Giant) under greenhouse conditions (14-h photoperiod, 24 to 30°C). Each seedling was grown in a 10-cm pot containing a commercial potting mix, and five healthy plants were inoculated with each isolate by placing 15 infected oat grains around each plant at a depth of 5 cm in the soil. Five plants treated with noninfected oat grains served as controls. Symptoms identical to those on field samples developed on all inoculated plants 3 weeks after inoculation but not on the control plants. F. solani was reisolated from inoculated symptomatic plants and the identity was confirmed, which completed Koch's postulates. The experiment was repeated one more time under similar conditions. To our knowledge, this is the first report of root rot caused by F. solani on wax gourd in the United States. Wax gourd is an important specialty crop in the southeastern United States and the occurrence of this disease needs to be taken into account in wax gourd production. References: (1) K. A. Abd-Elsalam et al. Afr. J. Biotechnol. 2:82, 2003. (2) C. Booth. Fusarium Laboratory Guide to the Identification of the Major Species. CMI, Kew, England, 1977. (3) D. M. Geiser et al. Eur. J. Plant Pathol. 110:473, 2004.

High glucose-induced expression of inflammatory cytokines and reactive oxygen species in cultured astrocytes

Astrocyte activation plays important roles both in physiological and pathological process in the CNS. In the latter, the process is further aggravated by hyperglycemia, leading to diabetes complications of CNS. We report here that high glucose (HG) treatment stimulated astrocytic morphological alteration coupled with changes in glial fibrillary acidic protein (GFAP) and vimentin expression. Additionally, HG upregulated the expression of tumor necrosis factor-α (TNF-α), interleukin-6 (IL-6), interleukin-1β (IL-1β), interleukin-4 (IL-4), and vascular endothelial growth factor (VEGF); however, its effects on transforming growth factor-β (TGF-β) expression were not evident. HG treatment induced increased production of reactive oxygen species (ROS) as well as activation of nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) and signal transducer and activator transcription 3 (STAT 3). HG-induced expression of TNF-α, IL-6, IL-1β, IL-4, and VEGF was blocked by ROS scavenger and inhibitors specific for NF-κB and STAT 3, respectively. The results suggest that the aforementioned multiple inflammatory cytokines and mediators that may be linked to the pathogenesis of the diabetes complications of CNS are induced by HG via the key signaling pathways.

The addition of arsenic trioxide to low-dose Ara-C in older patients with AML does not improve outcome

Most patients with acute myeloid leukaemia (AML) are older, with many unsuitable for conventional chemotherapy. Low-dose Ara-C (LDAC) is superior to best supportive care but is still inadequate. The combination of arsenic trioxide (ATO) and LDAC showed promise in an unrandomised study. We report a randomised trial of LDAC versus LDAC+ATO. Patients with AML according to WHO criteria or myelodysplastic syndrome with >10% blasts, considered as unfit for conventional chemotherapy, were randomised between subcutaneous Ara-C (20 mg b.d. for 10 days) and the same LDAC schedule with ATO (0.25 mg/kg) on days 1-5, 9 and 11, for at least four courses every 4 to 6 weeks. Overall 166 patients were entered; the trial was terminated on the advice of the DMC, as the projected benefit was not observed. Overall 14% of patients achieved complete remission (CR) and 7% CRi. Median survival was 5.5 months and 19 months for responders (CR: not reached; CRi: 14 months; non-responders: 4 months). There were no differences in response or survival between the arms. Grade 3/4 cardiac and liver toxicity, and supportive care requirements were greater in the ATO arm. This randomised comparison demonstrates that adding ATO to LDAC provides no benefit for older patients with AML.

First Report of Root Rot Caused by Binucleate Rhizoctonia Anastomosis Group F on Musa spp

A research program was initiated at the University of Georgia in 2003 to identify banana cultivars suitable for production in the coastal and southern areas of the state. During a root disease survey conducted in October 2007 on bananas (Musa spp.) grown at the University of Georgia Bamboo Farm and Coastal Gardens in Savannah, GA, root lesions and root rot were observed on banana cvs. Gold Finger, Kandarian, and Manzano. Root lesions were dark brown to black and irregular in shape, with partial or entire roots affected. Lateral roots and outer layers of cord roots (roots arising from interior layers of the corm) of infected plants were blackened and rotted. Diseased root samples were collected from three plants of each cultivar, surface sterilized with 0.6% sodium hypochlorite, and placed on tannic acid benomyl agar (TABA). Pure cultures of the fungus consistently associated with diseased tissue were obtained by subculturing hyphal tips on TABA. Mycelia of the fungus on potato dextrose agar (PDA) were light to deep brown and the hyphae tended to branch at right angles. A septum was present in each hyphal branch near the point of origin and a slight constriction at the branch was observed. The hyphae of two isolates were stained with 0.6% phenosafranin and 3% KOH and binucleate hyphal cells were observed. On the basis of these morphological features, the isolates appeared to be binucleate Rhizoctonia anamorphs (teleomorph Ceratobasidium Rogers). For molecular identification, the internal transcribed spacer (ITS) regions and the 5.8S gene from rDNA of the isolates were cloned and sequenced (GenBank Accession No. HQ168370). The ITS regions (775 bp) were 100% identical between the two isolates and 99% identical to Ceratobasidium sp. AG-F strain SIR-1 isolated from sweet potato in Japan (GenBank Accession No. AF354085). The anastomosis group of the isolates was confirmed by pairing with strain SIR-1 on PDA. On the basis of morphological and molecular characteristics and the anastomosis assay, the two isolates were identified as a Ceratobasidium sp. AG-F (1-3). Pathogenicity assays were conducted by inoculating banana plants (cv. Golden pillow, synonym = Manzano) grown in pots under greenhouse conditions (25 to 27°C). Twenty wheat seeds infested with each isolate were placed uniformly around each plant at a depth of 10 cm in the soil. The plants were incubated in the greenhouse and the roots were examined 2 months after inoculation. Brown-to-black lesions and root rot, identical to symptoms associated with field banana roots, were observed on all inoculated plants but not on the noninoculated control plants. The fungus was reisolated from affected root samples and the identity was confirmed by morphological and molecular characteristics and the anastomosis assay. To our knowledge, this is the first report of banana root rot caused by binucleate Rhizoctonia anastomosis group F. With the increased interest in producing bananas for food and ornamental purposes, the occurrence of Ceratobasidium root rot on bananas needs to be considered when designing disease management programs and searching for suitable cultivars for banana production. References: (1) L. L. Burpee et al. Mycologia 70:1281, 1978. (2) D. González et al. Mycologia 93:1138, 2001. (3) B. Sneh et al. Identification of Rhizoctonia Species. The American Phytopathological Society, St. Paul, MN. 1991.

In Situ Measurements of Stress Relaxation During Strained Layer Heteroepitaxy

We present real-time measurements of stress relaxation kinetics during epitaxial growth obtained using a wafer-curvature-based technique optimized for in situ studies. Depending on the temperature and misfit strain, different mechanisms of stress relaxation are observed. In heterolayers of InGaAs grown on GaAs (001) substrates, relaxation occurs by a dislocationmediated mechanism. In SiGe layers grown on Si (001) substrates at elevated temperature, relaxation occurs by the formation of islands on the surface. These islands elastically relax misfit stress without the introduction of dislocations at the island-substrate interface.