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Johnson AT, Guo X, Nygaard RM, Zera RT. Abstract P5-17-11: Trends in incidence, patient characteristics, and management of lobular carcinoma in situ. Cancer Res 2016. [DOI: 10.1158/1538-7445.sabcs15-p5-17-11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Introduction: Lobular carcinoma in situ (LCIS) is a rare lesion accounting for only 5% of total breast cancer diagnosis; however, the incidence has continued to increase, albeit at a slower rate than was seen in the 1980s and 1990s. Current National Comprehensive Cancer Network (NCCN) guidelines recommend surgical excision of the breast tissue containing LCIS due to risk of concomitant malignancy, but wide variations in treatment exist. Using the Surveillance, Epidemiology, and End Results (SEER) and National Cancer Database (NCDB) participant user files, an extensive survey of women with LCIS breast cancer was completed. Our aim was to identify patient and facility characteristics that are associated with aggressive treatment (mastectomy) or under-treatment (no surgical excision) following LCIS diagnosis.
Methods: Women with a diagnosis of LCIS from 1998 to 2011 within the SEER and NCDB databases were identified. Incidence data was gathered from SEER while all other characteristics (patient, facility, and treatment factors) were obtained from the NCDB. A logistic regression model was created to examine factors associated LCIS treatment modalities recorded in the NCDB.
Results: The incidence of LCIS increased from 3.85 to 4.46 / 100,000 women between 2000 and 2011. 62,923 female patients with LCIS were identified within the NCDB. The majority of women diagnosed with LCIS were between the ages of 40 and 59 years (66.8%, N=42,044), white (87.4%, N=55,022), and non-Hispanic (86.9%, N=54,679). Following a diagnosis of LCIS, most women underwent surgical excision (71.1%, N=44,731), with an additional 20.7% undergoing mastectomy (N=13,039) or opting for no surgery (8.0%, N=5,023). Logistic regression analysis demonstrated that age over 60 years was associated with no surgical intervention (OR 1.49, p<0.001), while age 40 to 59 were associated with aggressive therapy (OR 1.19, p<0.001). Economic factors associated with no surgical intervention following LCIS diagnosis include: no insurance (OR 1.24, p<0.001), government sponsored insurance (OR 1.48, p<0.001), live in areas with median income less than $63,000 per year (OR 0.744, p<0.001), and live in an area with higher rates of the population lacking high school education (OR 1.19, p<0.001). Patients undergoing aggressive treatment were more likely to be white (OR 1.57, p<0.001) and carry private insurance (OR 1.87, p<0.001). Patients receiving care at an academic center were more likely to receive aggressive treatment (OR 1.22, p<0.001). Living farther from treatment center was associated with increased odds of aggressive therapy, but not under-treatment (p<0.001 vs p=0.906, respectively).
Conclusion: Despite being a rare cancer, the incidence of LCIS continues to rise. LCIS is predominantly a cancer diagnosed in white, non-hispanic women. Advanced age, poverty, lack of insurance, low high school graduation rates were factors significantly associated with under-treatment of LCIS. Conversely, white women between 40-59 yo with private insurance and treated at a cancer center were more likely to undergo aggressive treatment.
Citation Format: Johnson AT, Guo X, Nygaard RM, Zera RT. Trends in incidence, patient characteristics, and management of lobular carcinoma in situ. [abstract]. In: Proceedings of the Thirty-Eighth Annual CTRC-AACR San Antonio Breast Cancer Symposium: 2015 Dec 8-12; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2016;76(4 Suppl):Abstract nr P5-17-11.
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Johnson AT. Respirator masks protect health but impact performance: a review. J Biol Eng 2016; 10:4. [PMID: 26865858 PMCID: PMC4748517 DOI: 10.1186/s13036-016-0025-4] [Citation(s) in RCA: 89] [Impact Index Per Article: 11.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Accepted: 02/01/2016] [Indexed: 11/10/2022] Open
Abstract
Respiratory protective masks are used whenever it is too costly or impractical to remove airborne contamination from the atmosphere. Respirators are used in a wide range of occupations, form the military to medicine. Respirators have been found to interfere with many physiological and psychological aspects of task performance at levels from resting to maximum exertion. Many of these limitations have been investigated in order to determine quantitatively how much performance decrement can be expected from different levels of respirator properties. The entire system, including respirator and wearer interactions, must be considered when evaluating wearer performances. This information can help respirator designers to determine trade-offs or managers to plan to compensate for reduced productivity of wearers.
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Johnson AT. Develop the Foresight to Anticipate Hindsight [State of the Art]. IEEE Pulse 2015. [DOI: 10.1109/mpul.2015.2476535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Gallena SJK, Solomon NP, Johnson AT, Vossoughi J, Tian W. The Effect of Exercise on Respiratory Resistance in Athletes With and Without Paradoxical Vocal Fold Motion Disorder. AMERICAN JOURNAL OF SPEECH-LANGUAGE PATHOLOGY 2015; 24:470-479. [PMID: 26001627 PMCID: PMC4657526 DOI: 10.1044/2015_ajslp-14-0110] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2014] [Revised: 11/28/2014] [Accepted: 05/12/2015] [Indexed: 05/30/2023]
Abstract
PURPOSE An investigational, portable instrument was used to assess inspiratory (R(i)) and expiratory (R(e)) resistances during resting tidal breathing (RTB), postexercise breathing (PEB), and recovery breathing (RB) in athletes with and without paradoxical vocal fold motion disorder (PVFMD). METHOD Prospective, controlled, repeated measures within-subject and between-groups design. Twenty-four teenage female athletes, 12 with and 12 without PVFMD, breathed into the Airflow Perturbation Device for baseline measures of respiratory resistance and for two successive 1-min trials after treadmill running for up to 12 min. Exercise duration and dyspnea ratings were collected and compared across groups. RESULTS Athletes with PVFMD had lower than control R(i) and R(e) values during RTB that significantly increased at PEB and decreased during RB. Control athletes' R(e) decreased significantly from RTB to PEB but not from PEB to RB, whereas R(i) did not change from RTB to PEB but decreased from PEB to RB. Athletes without PVFMD ran longer, providing lower dyspnea ratings. CONCLUSION Immediately following exercise, athletes with PVFMD experienced increased respiratory resistance that affected their exercise performance. The difference in resting respiratory resistances between groups is intriguing and could point to anatomical differences or neural adaptation in teenagers with PVFMD. The Airflow Perturbation Device appears to be a clinically feasible tool that can provide insight into PVFMD and objective data for tracking treatment progress.
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Johnson AT. The Raving [State of the Art]. IEEE Pulse 2015. [DOI: 10.1109/mpul.2015.2428302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Johnson AT. Why Are Our Teachers Taking It on the Chin? [State of the Art]. IEEE Pulse 2015. [DOI: 10.1109/mpul.2015.2409104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Johnson AT. Going solar. IEEE Pulse 2015; 6:36-51. [PMID: 25757233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
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Johnson AT. Going Solar [State of the Art]. IEEE Pulse 2015. [DOI: 10.1109/mpul.2014.2366902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Johnson AT. Genetic Discrimination and Racism [State of the Art]. IEEE Pulse 2014. [DOI: 10.1109/mpul.2014.2355320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Johnson AT. Should bioengineering graduates seek employment in the defense industry? IEEE Pulse 2014; 5:54-6. [PMID: 25264694 DOI: 10.1109/mpul.2014.2339431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
They say that the difference between a mechanical engineer and a civil engineer is that the mechanical engineer develops weapons whereas a civil engineer designs targets. The implication is that some engineers are involved with building peaceful infrastructure whereas others contribute to destruction. This brings to mind the question: what is the proper role for engineers in the creation of weapons and defenses against them? In particular, should engineers specializing in biology or medicine be involved in the defense industry? After all, bioengineers are supposed to be builders or healers rather than warriors or destroyers.
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Gallena SK, Solomon NP, Johnson AT, Vossoughi J, Tian W. Test-retest reliability of respiratory resistance measured with the airflow perturbation device. JOURNAL OF SPEECH, LANGUAGE, AND HEARING RESEARCH : JSLHR 2014; 57:1323-1329. [PMID: 24686535 DOI: 10.1044/2014_jslhr-s-13-0246] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
PURPOSE In this study, the authors aimed to determine reliability of the airflow perturbation device (APD) to measure respiratory resistance within and across sessions during resting tidal (RTB) and postexercise breathing in healthy athletes, and during RTB across trials within a session in athletes with paradoxical vocal fold motion (PVFM) disorder. METHOD Prospective, repeated-measures design. The APD measured respiratory resistance during 3 baseline assessments in 24 teenage female athletes, 12 with and 12 without PVFM. Control athletes provided data at rest and following a customized exercise challenge during each of 3 sessions. Intraclass correlation coefficient (ICC) analysis assessed strength of relationships, and repeated-measures analysis of variance assessed differences across trials and sessions. RESULTS ICC analyses confirmed strong correlations across RTB trials for inspiratory, expiratory, and mean respiratory resistance in both groups. Inspiratory resistance decreased ~5% between sessions for control participants; expiratory and mean respiratory resistances were stable. Data from control athletes across sessions and following rigorous exercise were strongly correlated when taken at comparable intervals. CONCLUSIONS APD-measured respiratory resistance, including separate assessments for the inspiratory and expiratory phases, has strong test-retest reliability during RTB and after exercising. This suggests that the APD is a useful measurement tool for the assessment of airway function in patients suspected of having PVFM.
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Johnson AT. The obvious answer [State of the Art]. IEEE Pulse 2014; 5:62. [DOI: 10.1109/mpul.2014.2321220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Johnson AT. Hands [State of the Art]. IEEE Pulse 2014. [DOI: 10.1109/mpul.2014.2309221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Johnson AT. Is It Really Personalized Medicine? [State of the Art]. IEEE Pulse 2013. [DOI: 10.1109/mpul.2013.2279623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Johnson AT. Why Biomedical Engineers Should Study Biology [State of the Art]. IEEE Pulse 2013; 4:50. [DOI: 10.1109/mpul.2013.2271918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Johnson AT. Choosing Good Graduate Students [State of the Art]. IEEE Pulse 2013. [DOI: 10.1109/mpul.2013.2250855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Gallena SJK, Tian W, Johnson AT, Vossoughi J, Sarles SA, Solomon NP. Validity of a new respiratory resistance measurement device to detect glottal area change. J Voice 2013; 27:299-304. [PMID: 23497798 DOI: 10.1016/j.jvoice.2013.01.006] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2012] [Accepted: 01/10/2013] [Indexed: 10/27/2022]
Abstract
OBJECTIVE To determine the correlation between respiratory resistance (Rr) values measured with the Airflow Perturbation Device (APD) to laryngoscopic images of glottal area (GA) in feigned paradoxical vocal fold motion (PVFM), also known as vocal cord dysfunction. HYPOTHESIS There is a strong inverse relationship between Rr and GA such that laryngeal constriction can be detected and quantified by APD-measured Rr. STUDY DESIGN Prospective, single subject study. METHODS A healthy adult feigned breathing that was characteristic of PVFM. Rr and GA were simultaneously recorded, synchronized, and analyzed for three complete breathing cycles with significant glottal constriction occurring during inspiration. RESULTS Cross-correlation analysis revealed a strong negative correlation (-0.824) between GA and Rr during feigned PVFM breathing such that Rr increased when GA decreased. CONCLUSION APD-measured Rr appears to be a viable noninvasive method for diagnostic screening and monitoring of treatment outcomes for individuals presenting with dyspnea related to PVFM.
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Johnson AT. Teaching the principle of biological optimization. J Biol Eng 2013; 7:6. [PMID: 23421993 PMCID: PMC3599908 DOI: 10.1186/1754-1611-7-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2012] [Accepted: 01/10/2013] [Indexed: 11/22/2022] Open
Abstract
Among the important principles in biology that should be taught in biological engineering educational programs is the principle of optimization, what it means, why it is important, and how it comes about. This material can be presented at numerous levels throughout the curriculum. Understanding of this principle can lead biological engineers to expect it in many, if not all, biological system applications. Understanding optimization in biological systems can help understand the predictive power of evolutionary principles and what to expect from living things incorporated in designs.
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Rizzardi AE, Johnson AT, Vogel RI, Pambuccian SE, Henriksen J, Skubitz AP, Metzger GJ, Schmechel SC. Quantitative comparison of immunohistochemical staining measured by digital image analysis versus pathologist visual scoring. Diagn Pathol 2012; 7:42. [PMID: 22515559 PMCID: PMC3379953 DOI: 10.1186/1746-1596-7-42] [Citation(s) in RCA: 298] [Impact Index Per Article: 24.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2012] [Accepted: 04/19/2012] [Indexed: 01/02/2023] Open
Abstract
Abstract Immunohistochemical (IHC) assays performed on formalin-fixed paraffin-embedded (FFPE) tissue sections traditionally have been semi-quantified by pathologist visual scoring of staining. IHC is useful for validating biomarkers discovered through genomics methods as large clinical repositories of FFPE specimens support the construction of tissue microarrays (TMAs) for high throughput studies. Due to the ubiquitous availability of IHC techniques in clinical laboratories, validated IHC biomarkers may be translated readily into clinical use. However, the method of pathologist semi-quantification is costly, inherently subjective, and produces ordinal rather than continuous variable data. Computer-aided analysis of digitized whole slide images may overcome these limitations. Using TMAs representing 215 ovarian serous carcinoma specimens stained for S100A1, we assessed the degree to which data obtained using computer-aided methods correlated with data obtained by pathologist visual scoring. To evaluate computer-aided image classification, IHC staining within pathologist annotated and software-classified areas of carcinoma were compared for each case. Two metrics for IHC staining were used: the percentage of carcinoma with S100A1 staining (%Pos), and the product of the staining intensity (optical density [OD] of staining) multiplied by the percentage of carcinoma with S100A1 staining (OD*%Pos). A comparison of the IHC staining data obtained from manual annotations and software-derived annotations showed strong agreement, indicating that software efficiently classifies carcinomatous areas within IHC slide images. Comparisons of IHC intensity data derived using pixel analysis software versus pathologist visual scoring demonstrated high Spearman correlations of 0.88 for %Pos (p < 0.0001) and 0.90 for OD*%Pos (p < 0.0001). This study demonstrated that computer-aided methods to classify image areas of interest (e.g., carcinomatous areas of tissue specimens) and quantify IHC staining intensity within those areas can produce highly similar data to visual evaluation by a pathologist. Virtual slides The virtual slide(s) for this article can be found here: http://www.diagnosticpathology.diagnomx.eu/vs/1649068103671302
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Johnson AT, Jones SC, Pan JJ, Vossoughi J. Variation of respiratory resistance suggests optimization of airway caliber. IEEE Trans Biomed Eng 2012; 59:2355-61. [PMID: 22711765 DOI: 10.1109/tbme.2012.2204055] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Physiologically optimized processes, such as respiration, walking, and cardiac function, usually show a range of variability about the optimized value. Airway resistance has, in the past, been noted as variable, and this variability has been connected to pulmonary disease (e.g., asthma). A hypothesis was presented many years ago that postulated airway resistance as an optimized parameter in healthy individuals, and we have noticed that respiratory measurements made with the airflow perturbation device (APD) tend to be variable in nature. It was posited that this variability indicates that respiratory resistance is optimized similarly to other physiological processes. Fifty subjects with a wide range of demographics volunteered to have 100 measurements made of their respiratory resistances. Resistances were separated into inhalation and exhalation phases. These were plotted and shown to have frequency distributions that were consistent with expectations for an optimized process. The frequency distributions were not quite symmetrical, being skewed slightly toward upper resistances. Comparison between subject data and data from a mechanical respiratory analog showed that subject resistance variation is overwhelmingly from the respiratory system and not from the APD.
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Johnson AT. Math aversion. IEEE Pulse 2012; 3:56-57. [PMID: 22860266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
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Johnson AT, Vossoughi J, Pan J. Calibration of an Airflow Perturbation Device (APD). J Med Device 2012. [DOI: 10.1115/1.4026695] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
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Johnson AT. Old Man River [state of the art]. IEEE Pulse 2012; 3:74. [PMID: 22577705] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
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Johnson AT. A rose by any other name is a different rose. IEEE Pulse 2011; 2:50. [PMID: 21409848 DOI: 10.1109/mpul.2010.939613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Moore LE, Baris DR, Figueroa JD, Garcia-Closas M, Karagas MR, Schwenn MR, Johnson AT, Lubin JH, Hein DW, Dagnall CL, Colt JS, Kida M, Jones MA, Schned AR, Cherala SS, Chanock SJ, Cantor KP, Silverman DT, Rothman N. GSTM1 null and NAT2 slow acetylation genotypes, smoking intensity and bladder cancer risk: results from the New England bladder cancer study and NAT2 meta-analysis. Carcinogenesis 2010; 32:182-9. [PMID: 21037224 DOI: 10.1093/carcin/bgq223] [Citation(s) in RCA: 98] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
Associations between bladder cancer risk and NAT2 and GSTM1 polymorphisms have emerged as some of the most consistent findings in the genetic epidemiology of common metabolic polymorphisms and cancer, but their interaction with tobacco use, intensity and duration remain unclear. In a New England population-based case-control study of urothelial carcinoma, we collected mouthwash samples from 1088 of 1171 cases (92.9%) and 1282 of 1418 controls (91.2%) for genotype analysis of GSTM1, GSTT1 and NAT2 polymorphisms. Odds ratios and 95% confidence intervals of bladder cancer among New England Bladder Cancer Study subjects with one or two inactive GSTM1 alleles (i.e. the 'null' genotype) were 1.26 (0.85-1.88) and 1.54 (1.05-2.25), respectively (P-trend = 0.008), compared with those with two active copies. GSTT1 inactive alleles were not associated with risk. NAT2 slow acetylation status was not associated with risk among never (1.04; 0.71-1.51), former (0.95; 0.75-1.20) or current smokers (1.33; 0.91-1.95); however, a relationship emerged when smoking intensity was evaluated. Among slow acetylators who ever smoked at least 40 cigarettes/day, risk was elevated among ever (1.82; 1.14-2.91, P-interaction = 0.07) and current heavy smokers (3.16; 1.22-8.19, P-interaction = 0.03) compared with rapid acetylators in each category; but was not observed at lower intensities. In contrast, the effect of GSTM1-null genotype was not greater among smokers, regardless of intensity. Meta-analysis of the NAT2 associations with bladder cancer showed a highly significant relationship. Findings from this large USA population-based study provided evidence that the NAT2 slow acetylation genotype interacts with tobacco smoking as a function of exposure intensity.
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Johnson AT, Dooly CR, Caretti DM, Green M, Scott WH, Coyne KM, Sahota MS, Benjamin B. Individual Work Performance During a 10-Hour Period of Respirator Wear. ACTA ACUST UNITED AC 2010. [DOI: 10.1080/15428119791012702] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Coursey DC, Scharf SM, Johnson AT. Comparing pulmonary resistance measured with an esophageal balloon to resistance measurements with an airflow perturbation device. Physiol Meas 2010; 31:921-34. [DOI: 10.1088/0967-3334/31/7/004] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Lopresti ER, Johnson AT, Koh FC, Scott WH, Jamshidi S, Silverman NK. Testing limits to airflow perturbation device (APD) measurements. Biomed Eng Online 2008; 7:28. [PMID: 18976487 PMCID: PMC2600779 DOI: 10.1186/1475-925x-7-28] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2007] [Accepted: 10/31/2008] [Indexed: 11/11/2022] Open
Abstract
Background The Airflow Perturbation Device (APD) is a lightweight, portable device that can be used to measure total respiratory resistance as well as inhalation and exhalation resistances. There is a need to determine limits to the accuracy of APD measurements for different conditions likely to occur: leaks around the mouthpiece, use of an oronasal mask, and the addition of resistance in the respiratory system. Also, there is a need for resistance measurements in patients who are ventilated. Method Ten subjects between the ages of 18 and 35 were tested for each station in the experiment. The first station involved testing the effects of leaks of known sizes on APD measurements. The second station tested the use of an oronasal mask used in conjunction with the APD during nose and mouth breathing. The third station tested the effects of two different resistances added in series with the APD mouthpiece. The fourth station tested the usage of a flexible ventilator tube in conjunction with the APD. Results All leaks reduced APD resistance measurement values. Leaks represented by two 3.2 mm diameter tubes reduced measured resistance by about 10% (4.2 cmH2O·sec/L for control and 3.9 cm H2O·sec/L for the leak). This was not statistically significant. Larger leaks given by 4.8 and 6.4 mm tubes reduced measurements significantly (3.4 and 3.0 cm cmH2O·sec/L, respectively). Mouth resistance measured with a cardboard mouthpiece gave an APD measurement of 4.2 cm H2O·sec/L and mouth resistance measured with an oronasal mask was 4.5 cm H2O·sec/L; the two were not significantly different. Nose resistance measured with the oronasal mask was 7.6 cm H2O·sec/L. Adding airflow resistances of 1.12 and 2.10 cm H2O·sec/L to the breathing circuit between the mouth and APD yielded respiratory resistance values higher than the control by 0.7 and 2.0 cm H2O·sec/L. Although breathing through a 52 cm length of flexible ventilator tubing reduced the APD measurement from 4.0 cm H2O·sec/L for the control to 3.6 cm H2O·sec/L for the tube, the difference was not statistically significant. Conclusion The APD can be adapted for use in ventilated, unconscious, and uncooperative patients with use of a ventilator tube and an oronasal mask without significantly affecting measurements. Adding a resistance in series with the APD mouthpiece has an additive effect on resistance measurements, and can be used for qualitative calibration. A leak size of at least the equivalent of two 3.2 mm diameter tubes can be tolerated without significantly affecting APD measurements.
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Johnson AT, Koh FC, Jamshidi S, Rehak TE. Human subject testing of leakage in a loose-fitting PAPR. JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE 2008; 5:325-329. [PMID: 18348078 DOI: 10.1080/15459620801996819] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Leakage from loose-fitting PAPRs (powered air-purifying respirators) can compromise the safety of wearers. The Martindale Centurion MAX multifunction PAPR is a loose-fitting PAPR that also incorporates head, eye, and ear protection. This respirator is used in mines where coal dust usually is controlled by ventilation systems. Should the respirator be depended on for significant respiratory protection? Ten human volunteers were asked to wear the Centurion MAX inside a fog-filled chamber. Their inhalation flow rates were measured with small pitot-tube flowmeters held inside their mouths. They were video imaged while they breathed deeply, and the points at which the fog reached their mouths were determined. Results showed that an average of 1.1 L could be inhaled before contaminated air reached the mouth. As long as the blower purges contamination from inside the face piece during exhalation, the 1.1 L acts as a buffer against contaminants leaked due to overbreathing of blower flow rate.
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Johnson AT, Scott WH, Koh FC, Phelps SJ, Francis EB, Lopresti E. How far can one walk wearing a self-contained self rescuer? JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE 2007; 4:49-53. [PMID: 17162480 DOI: 10.1080/15459620601074049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Self-contained self rescuers (SCSRs) are used for emergency escapes in oxygen-deficit atmospheres. Certified by NIOSH to last 1 hour, SCSRs generate oxygen by chemical reaction and must meet a minimum oxygen generation time of 60 min when used according to instructions. Wearers must walk or crawl at a controlled rate to conform to the limits of the devices. The aim of the is study was intended to determine the distance that can be walked when using SCSRs as intended. Fourteen volunteer subjects walked on a treadmill at moderate rates that they controlled. They were instructed to walk as far as possible without using oxygen at a rate higher than the SCSR could produce. Distances walked ranged from 2.1 km to 9.2 km with an average distance of 6.0 km. SCSR operating times ranged from 30 min to 94 min. If the required walking distance is farther than this, multiple units will have to be available to allow safe escape.
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Koh FC, Johnson AT, Scott WH, Phelps SJ, Francis EB, Cattungal S. The correlation between personality type and performance time while wearing a respirator. JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE 2006; 3:317-22. [PMID: 16627370 DOI: 10.1080/15459620600691264] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Many studies have shown that individuals perform better if not wearing a respirator compared with wearing a respirator. This study examined the degree of performance reduction attributable to specific dominant character traits. The subjects performed on a treadmill at a constant speed and grade resulting in 80-85% VO(2)max. A modified M40 respirator was used to create three levels of inspiratory resistance: 2.8, 16.8, and 27.3 cmH(2)O*(sec/L). The 31 subjects were tested using a Myers-Briggs Type Indicator and State-Trait Anxiety Inventory. Multiple regressions and an ANOVA were used to test for correlation. When air intake is very constricted, the only multiple regression equation that was found to be statistically significant was sensing-intuition (how one takes in information) and thinking-feeling (how one makes a decision) vs. performance time for the highest value of inhalation resistance. A simple linear regression between trait anxiety level and performance time was not found to be statistically significant for the same highest value of inhalation resistance.
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Lausted CG, Johnson AT, Scott WH, Johnson MM, Coyne KM, Coursey DC. Maximum static inspiratory and expiratory pressures with different lung volumes. Biomed Eng Online 2006; 5:29. [PMID: 16677384 PMCID: PMC1501025 DOI: 10.1186/1475-925x-5-29] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2005] [Accepted: 05/05/2006] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Maximum pressures developed by the respiratory muscles can indicate the health of the respiratory system, help to determine maximum respiratory flow rates, and contribute to respiratory power development. Past measurements of maximum pressures have been found to be inadequate for inclusion in some exercise models involving respiration. METHODS Maximum inspiratory and expiratory airway pressures were measured over a range of lung volumes in 29 female and 19 male adults. A commercial bell spirometry system was programmed to occlude airflow at nine target lung volumes ranging from 10% to 90% of vital capacity. RESULTS In women, maximum expiratory pressure increased with volume from 39 to 61 cmH2O and maximum inspiratory pressure decreased with volume from 66 to 28 cmH2O. In men, maximum expiratory pressure increased with volume from 63 to 97 cmH2O and maximum inspiratory pressure decreased with volume from 97 to 39 cmH2O. Equations describing pressures for both sexes are: Pe/Pmax = 0.1426 Ln( %VC) + 0.3402 R2 = 0.95 Pi/Pmax = 0.234 Ln(100 - %VC) - 0.0828 R2 = 0.96 CONCLUSION These results were found to be consistent with values and trends obtained by other authors. Regression equations may be suitable for respiratory mechanics models.
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Satishkumar BC, Paulson S, Johnson AT, Luzzi DE. Electron beam induced structural transformations of SWNTs and DWNTs grown on Si3N4/Si substrates. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY 2006; 6:1350-6. [PMID: 16792364 DOI: 10.1166/jnn.2006.188] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Electron beam induced structural transformations are investigated in single-wall carbon nanotubes (SWNTs), double-wall carbon nanotubes (DWNTs) and crossed nanotube junctions. The nanotubes studied here are synthesized by the chemical vapor deposition method. The response of the nanotubes to an electron beam is found to be influenced by the presence of coatings of amorphous carbon, graphene fragments and structural defects on the tube surface. The dependence of structural modifications on electron beam irradiation dose is measured. While nanotubes with amorphous carbon, graphene fragment coverage and/or defects undergo rapid transformation leading to structure disintegration, those without such coverage or defects are more resistant to beam damage. In addition, it is shown that the amorphous carbon coverage on the double-wall nanotubes can be transformed into graphene layers during electron beam irradiation of coated nanotubes. Finally, the relative stability of nanotube side-wall and end-walls are investigated through sub-threshold energy and above threshold energy irradiation of a model system, C60-filled nanotubes (Peapods). The data indicates that electron beams could be used to join nanotubes end-to-end without damaging the side-walls.
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Scott WH, Johnson AT. Energy Expenditure Requirements to Ascend and Descend a 20 Floor High-Rise Building. Med Sci Sports Exerc 2006. [DOI: 10.1249/00005768-200605001-02777] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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91
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Johnson AT, Montas H, Shirmohammadi A, Wheaton FW. Change is necessary in a biological engineering curriculum. Biotechnol Prog 2006; 22:167-72. [PMID: 16454507 DOI: 10.1021/bp050074k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Success of a Biological Engineering undergraduate educational program can be measured in a number of ways, but however it is measured, a presently successful program can translate into an unsuccessful program if it cannot adjust to different conditions posed by technical advances, student characteristics, and academic pressures. Described in this paper is a Biological Engineering curriculum that has changed significantly since its transformation from Agricultural Engineering in 1993. As a result, student numbers have continued to climb, specific objectives have emerged, and unique courses have been developed. The Biological Resources Engineering program has evolved into a program that emphasizes breadth, fundamentals, communications skills, diversity, and practical engineering judgment.
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Johnson AT, Mackey KR, Scott WH, Koh FC, Chiou KYH, Phelps SJ. Exercise performance while wearing a tight-fitting powered air purifying respirator with limited flow. JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE 2005; 2:368-73. [PMID: 16020100 DOI: 10.1080/15459620591005044] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Sixteen subjects exercised at 80-85% of maximal aerobic capacity on a treadmill while wearing a tight-fitting, FRM40-Turbo Powered Air Purifying Respirator (PAPR). The PAPR was powered by a DC power supply to give flow rates of 0%, 30%, 66%, 94%, and 100% of rated maximum blower capacity of 110 L/min. As flow rate was reduced, so was performance time. There was a 20% reduction in performance time as blower flow changed from 100% to 0% of maximum. Significant differences in breathing apparatus comfort and facial thermal comfort were found as flow rate varied. It was concluded that inadequate blower flow rate decreases performance time, facial cooling, and respirator comfort.
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Milkie DE, Staii C, Paulson S, Hindman E, Johnson AT, Kikkawa JM. Controlled switching of optical emission energies in semiconducting single-walled carbon nanotubes. NANO LETTERS 2005; 5:1135-8. [PMID: 15943456 DOI: 10.1021/nl050688j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
We present scanning photoluminescence (PL) microscopy of freely suspended single-walled carbon nanotubes grown by chemically assisted vapor deposition (CVD) across micron-sized open apertures. Scans of the PL emission versus excitation position show unusual "holes"having subwavelength spatial features associated with abrupt blue shifts of the emission energy. By varying the excitation polarization, energy, intensity, and position, we demonstrate that optical switching in some nanotubes is controllable in a highly nonlinear manner by adjusting the nonequilibrium carrier density in the nanotube. Technologically important attributes include large spectral contrast between on/off states at room temperature, a dramatic response to small changes in light intensity near threshold, and the possibility that electrical charge injection could also be used to control emission energies.
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Silverman NK, Johnson AT, Scott WH, Koh FC. Exercise-induced respiratory resistance changes as measured with the airflow perturbation device. Physiol Meas 2005; 26:29-38. [PMID: 15742876 DOI: 10.1088/0967-3334/26/1/003] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Respiratory resistance (Rrs) changes during physical labor can modify the work of breathing and thus influence the time that the labor can be performed. Ideal in vivo human respiratory performance measurements should have fine temporal resolution and minimally impact the respiratory system itself. The airflow perturbation device (APD) provides respiratory resistance measurements in this manner. Pre-exercise Rrs was compared with post-exercise Rrs, continuously monitored for 6 min in 12 non-asthmatic subjects. Rrs following exercise at 70-75% VO2max was below pre-exercise levels for 40 s into recovery (p < 0.05) and inhalation resistance differed more markedly than exhalation resistance. The same post-exercise Rrs decline was found when Rrs measurements were compared to those taken during flow rates comparable to those found late in recovery. Results indicate that (1) Rrs indeed declines following exercise in non-asthmatic subjects, probably due to bronchial dilation, (2) Rrs changes can occur on short time scales, (3) Rrs changes are not related primarily to flow rate.
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Scott WH, Mackey KR, Chu K, Koh F, Johnson AT. Quantifying Energy Expenditure During Water-immersion In Non-trained Cyclists. Med Sci Sports Exerc 2005. [DOI: 10.1249/00005768-200505001-02256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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96
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Rebar JE, Johnson AT, Scott WH, Russek-Cohen E, Caretti DM. Effect of differing facial characteristics on breathing resistance inside a respirator mask. JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HYGIENE 2004; 1:343-348. [PMID: 15238324 DOI: 10.1080/15459620490447956] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
A group of subjects with a large range of facial characteristics was asked to breathe deeply while wearing a full facepiece respirator. The facial characteristics noted were head length, head depth, bizygomatic breadth, lip length, and Menton-Sellion length. External resistances to inhalation or exhalation were varied in each of the trials. The data collected were analyzed for possible correlation between facial characteristics and breathing resistance. Although respirator resistances were found to vary, no statistically significant correlation was found with anthropometric measurements.
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Johnson AT, Sahota MS. Validation of airflow perturbation device resistance measurements in excised sheep lungs. Physiol Meas 2004; 25:679-90. [PMID: 15253119 DOI: 10.1088/0967-3334/25/3/008] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
The airflow perturbation device (APD) is a recently redesigned instrument to measure resistance in the respiratory system. The APD is small and easy to use, gives rapid resistance measurements, and can easily separate inhalation from exhalation components. It also possesses some operational characteristics similar to forced oscillation (FO). Excised sheep lungs within a respiratory chamber were used to determine the effective resistance domain of the APD. Retrograde catheters were installed in the airways, alveolar capsules were used to measure alveolar pressures, and chamber pressure was used as pleural pressure. FO measurements were made to compare with the APD. The APD was found to give a resistance measurement about 1.7 to 1.9 times airway resistance. FO gave a resistance measurement 1.4 times airway resistance. Resistance values differed depending on analysis procedure and frequency of oscillation. Both devices were found to produce oscillations beyond the pleural surface of the lungs. It was concluded that the APD and FO measure similar respiratory resistances.
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Freitag M, Johnson AT, Kalinin SV, Bonnell DA. Role of single defects in electronic transport through carbon nanotube field-effect transistors. PHYSICAL REVIEW LETTERS 2002; 89:216801. [PMID: 12443439 DOI: 10.1103/physrevlett.89.216801] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2002] [Indexed: 05/24/2023]
Abstract
The influence of defects on electron transport in single-wall carbon nanotube field-effect transistors (CNFETs) is probed by combined scanning gate microscopy (SGM) and scanning impedance microscopy (SIM). SGM images are used to quantify the depletion surface potential, and from this the Fermi level, at individual defects along the CNFET length. SIM is used to measure the voltage distribution along the CNFET. When the CNFET is in the conducting state, SIM reveals a uniform potential drop along its length, consistent with diffusive transport. In contrast, when the CNFET is "off," potential steps develop at the position of depleted defects. High-resolution imaging of a second set of weak defects is achieved in a new "tip-gated" SIM mode.
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Johnson AT, Benjamin MB, Silverman N. Oxygen consumption, heat production, and muscular efficiency during uphill and downhill walking. APPLIED ERGONOMICS 2002; 33:485-491. [PMID: 12236658 DOI: 10.1016/s0003-6870(02)00031-5] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Oxygen consumption, heat production, and muscular efficiency for walking are parameters important to know for ergonomics models and equipment design. Most of these assume that the oxygen consumption and heat production of downhill walking are the same as for uphill walking. Eight subjects wearing insulating clothing walked on a treadmill at three uphill and three downhill grades, and at level grade at a rate of 1.1 m/s. Oxygen consumption VO2 was calculated from steady state measurements of respiratory minute volume and oxygen percentage. Heat production (q) was calculated from the rate of heat storage in the body and clothing. Least-squares best fit equations for oxygen consumption and heat production found were to be VO2 = 0.813 + 0.0361G + 0.000810G2 - 0.0000302G3 and q = 6.55 + 0.185G + 0.0114G2 - 0.000190G3 where G is percent grade. Approximations show that VO2 (downhill) = 0.5 VO2 (uphill), q (downhill) = 0.67 q (uphill), and muscular efficiency eta (downhill) = -2eta (uphill).
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Scott WH, Coyne KM, Johnson MM, Lausted CG, Sahota M, Johnson AT. Effects of caffeine on performance of low intensity tasks. Percept Mot Skills 2002; 94:521-32. [PMID: 12027348 DOI: 10.2466/pms.2002.94.2.521] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
31 college age men and women who consume less than three caffeinated beverages per week agreed to participate as subjects in research on the effects of acute caffeine intake on low intensity task performance. All subjects performed two randomly administered test conditions: (1) caffeine (5 mg/kg) and (2) placebo on separate visits following an initial 1-hr. orientation visit. Subjects were administered the beverage 30 min. prior to performing 12 separate tests assessing basic mathematics, simple response, logical reasoning, hand-eye coordination, and spatial and assembly skills. The Spielberger State Anxiety test was administered immediately after consuming the test beverage and once again at posttest. Analysis showed that caffeine did not significantly affect performance on all tests with the exception of the peripheral awareness (hand-eye coordination) test on which performance was higher after ingesting caffeine. The placebo treatment produced no effect on state anxiety, which contrasted with a significant rise in anxiety after caffeine consumption. State anxiety values were significantly greater after caffeine treatment relative to the placebo at pretest, and this difference persisted at posttest. These results demonstrated that the dose of caffeine increased scores on state anxiety for individuals who consumed less than three caffeinated beverages weekly but had very little effect on performance of low intensity tasks, except for a hand-eye coordination test involving peripheral awareness. Perhaps longer continuous performance of more demanding tasks would be more sensitive.
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