Threshold photoelectron spectroscopy of 9-methyladenine: theory and experiment

We present a combined experimental and theoretical study of single-photon ionization of 9-methyladenine (9MA) in the gas phase. In addition to tautomerism, several rotamers due to the rotation of the methyl group may exist. Computations show, however, that solely one rotamer contributes because of low population in the molecular beam and/or unfavorable Franck-Condon factors upon ionization. Experimentally, we used VUV radiation available at the DESIRS beamline of the synchrotron radiation facility SOLEIL to record the threshold photoelectron spectrum of this molecule between 8 and 11 eV. This spectrum consists of a well-resolved band assigned mainly to vibronic levels of the D₀ cationic state, plus a contribution from the D₁ state, and two large bands corresponding to the D₁, D₂ and D₃ electronically excited states. The adiabatic ionization energy of 9MA is measured at 8.097 ± 0.005 eV in close agreement with the computed value using the explicitly correlated coupled cluster approach including core valence, scalar relativistic and zero-point vibrational energy corrections. This work sheds light on the complex pattern of the lowest doublet electronic states of 9MA⁺. The comparison to canonical adenine reveals that methylation induces further electronic structure complication that may be important to understand the effects of ionizing radiation and the charge distribution in these biological entities at different time scales.

Photoelectron Spectroscopy of the Water Dimer Reveals Unpredicted Vibrational Structure

Hydrogen bonds and proton transfer reactions can be considered as being at the very heart of aqueous chemistry and of utmost importance for many processes of biological relevance. Nevertheless, these processes are not yet well understood, even in seemingly simple model systems like small water clusters. We present a study of the photoelectron spectrum of the water dimer, revealing previously unresolved vibrational structure with 10-30 meV (80-242 cm^-1) typical splitting, in disagreement with a previous theoretical photoionization study predicting an apparent main vibrational progression with an ∼130 meV spacing [Kamarchik et al.; J. Chem. Phys. 2010, 132, 194311]. The observed vibrational structure and its deviation from the theoretical prediction is discussed in terms of known difficulties with calculations of strongly coupled anharmonic systems involving large amplitude motions. Potential contributions of the nonzero vibrational energy of the neutral water dimer at a finite experimental internal temperature are addressed. The internal temperature is estimated from the breakdown diagram associated with the dissociative ionization of the water dimer to be around to 130 K. This analysis also provides two additional, independently measured values for the 0 K appearance energy of the hydronium ion (H₃O⁺) from dissociative ionization of the water dimer.

Conformer-dependent vacuum ultraviolet photodynamics and chiral asymmetries in pure enantiomers of gas phase proline

Proline is a unique amino-acid, with a secondary amine fixed within a pyrrolidine ring providing specific structural properties to proline-rich biopolymers. Gas-phase proline possesses four main H-bond stabilized conformers differing by the ring puckering and carboxylic acid orientation. The latter defines two classes of conformation, whose large ionization energy difference allows a unique conformer-class tagging via electron spectroscopy. Photoelectron circular dichroism (PECD) is an intense chiroptical effect sensitive to molecular structures, hence theorized to be highly conformation-dependent. Here, we present experimental evidence of an intense and striking conformer-specific PECD, measured in the vacuum ultraviolet (VUV) photoionization of proline, as well as a conformer-dependent cation fragmentation behavior. This finding, combined with theoretical modeling, allows a refinement of the conformational landscape and energetic ordering, that proves inaccessible to current molecular electronic structure calculations. Additionally, astrochemical implications regarding a possible link of PECD to the origin of life's homochirality are considered in terms of plausible temperature constraints.

Resolving the F2 bond energy discrepancy using coincidence ion pair production (cipp) spectroscopy

Coincidence ion pair production (cipp) spectra of F₂ were recorded on the DELICIOUS III coincidence spectrometer in the one-photon excitation region of 125 975-126 210 cm^-1. The F⁺ + F^- signal shows a rotational band head structure, corresponding to F₂ Rydberg states crossing over to the ion pair production surface. Spectral simulation and quantum defect analysis allowed the characterization of five new molecular Rydberg states (F₂**): one Π and four Σ states. The lowest-energy Rydberg state spectrum observed (T₀ = 125 999 cm^-1) lacked some of the predicted rotational structure, which allowed an accurate determination of the ion pair production threshold of 15.6229₄± 0.0004₃ eV. Using the well-known atomic fluorine ionization energy and electron affinity, this number leads to a ground state F-F dissociation energy of 1.6012₉± 0.0004₄ eV. Photoelectron photoion coincidence (PEPICO) experiments were also carried out on F₂ and the dissociative photoionization threshold to F⁺ + F was determined as 19.0242 ± 0.0006 eV. Using the atomic fluorine ionization energy, this can be converted to an F₂ dissociation energy of 1.6013₂± 0.0006₂ eV, further confirming the cipp-derived value above. Because the two experiments were independently energy-calibrated, they can be averaged to 1.6013₀± 0.0003₆ eV and this value can be used to derive the fluorine atom's 0 K heat of formation as 77.25₁± 0.01₇ kJ mol^-1. This latter is in excellent agreement with the latest Active Thermochemical Table (ATcT) value but improves its accuracy by almost a factor of three.

Photoionization Cross Section of the NH2 Free Radical in the 11.1-15.7 eV Energy Range

The NH₂ radical is a key component in many astrophysical environments, both in its neutral and cationic forms, being involved in the formation of complex N-bearing species. To gain insight into the photochemical processes into which it operates and to model accurately the ensuing chemical networks, the knowledge of its photoionization efficiency is required, but no quantitative determination has been carried out so far. Combining a flow-tube H-abstraction radical source, a double imaging photoelectron-photoion spectrometer, and a vacuum-ultraviolet synchrotron excitation, the absolute photoionization cross section of the amino radical has been measured in the present work for the first time at two photon energies: σ_ion^NH₂(12.7 eV) = 7.8 ± 2.2 Mb and σ_ion^NH₂(13.2 eV) = 7.8 ± 2.0 Mb. These values have been employed to scale the total ion yield previously recorded by Gibson et al. ( J. Chem. Phys. 1985, 83, 4319-4328). The resulting cross section curve spanning the 11.1-15.7 eV energy range will help in refining the current astrophysical models.

Condensation Effects on Electron Chiral Asymmetries in the Photoionization of Serine: From Free Molecules to Nanoparticles

Structural changes at the molecular level, occurring at the onset of condensation, can be probed by angle-resolved valence photoelectron spectroscopy, which is inherently sensitive to the electronic structure. For larger condensed systems like aerosol particles, the observation of intrinsic angular anisotropies in photoemission (β parameters) is challenging due to the strong reduction of their magnitude by electron transport effects. Here, we use a less common, more sensitive observable in the form of the chiral asymmetry parameter to perform a comparative study of the VUV photoelectron spectroscopy and photoelectron circular dichroism (PECD) between pure gas phase enantiomers of the amino acid serine and their corresponding homochiral nanoparticles. We observe a relatively large (1%) and strongly kinetic energy-dependent asymmetry, discussed in terms of the emergence of local order and conformational changes potentially counterbalancing the loss of angular information due to electron transport scattering. This demonstrates the potential of PECD as a sensitive probe of the condensation effects from the gas phase to bulk-like chiral aerosol particles surpassing the potential of conventional photoemission observables such as β parameters.

A new instrument for kinetics and branching ratio studies of gas phase collisional processes at very low temperatures

A new instrument dedicated to the kinetic study of low-temperature gas phase neutral-neutral reactions, including clustering processes, is presented. It combines a supersonic flow reactor with vacuum ultra-violet synchrotron photoionization time-of-flight mass spectrometry. A photoion-photoelectron coincidence detection scheme has been adopted to optimize the particle counting efficiency. The characteristics of the instrument are detailed along with its capabilities illustrated through a few results obtained at low temperatures (<100 K) including a photoionization spectrum of n-butane, the detection of formic acid dimer formation, and the observation of diacetylene molecules formed by the reaction between the C₂H radical and C₂H₂.

Experimental and Theoretical Investigation of the 3sp(d) Rydberg States of Fenchone by Polarized Laser Resonance-Enhanced-Multiphoton-Ionization and Fourier Transform VUV Absorption Spectroscopy

The VUV absorption spectrum of fenchone is re-examined using synchrotron radiation Fourier transform spectrometry, revealing new vibrational structure. Picosecond laser (2+1) resonance enhanced multiphoton ionization (REMPI) spectroscopy complements this, providing an alternative view of the 3spd Rydberg excitation region. These spectra display broadly similar appearance, with minor differences that are largely explained by referring to calculated one- and two-photon electronic excitation cross-sections. Both show good agreement with Franck-Condon simulations of the relevant vibrational structures. Parent ion REMPI ionization yields with both femtosecond and picosecond excitation laser pulses are studied as a function of laser polarization and intensity, the latter providing insight into the relative two-photon excitation and one-photon ionization rates. The experimental circular-linear dichroism observed in the parent ion yields varies strongly between the 3s and 3p Rydberg states, in good overall agreement with the calculated two-photon excitation circular-linear dichroism, while corroborating other evidence that the 3pz sub-state plays no more than a very minor role in the (2+1) REMPI spectrum. Vibrationally resolved photoelectron spectra are recorded with picosecond pulse duration (2+1) REMPI at selected intermediate vibrational excitations. The 3s intermediate state displays a very strong Δv=0 propensity on ionization, but the 3p intermediate evidences more complex vibronic dynamics, and we infer some 3p→3s internal conversion prior to ionization.

Threshold photoelectron spectroscopy of the HO2 radical

We report a synchrotron radiation vacuum ultraviolet photoionization study of the hydroperoxyl radical (HO₂), a key reaction intermediate in combustion and atmospheric chemistry as well as astrochemistry, using double imaging photoelectron photoion coincidence spectroscopy. The HO₂ radical is formed in a microwave discharge flow tube reactor through a set of reactions initiated by F atoms in a CH₄/O₂/He gas mixture. The high-resolution threshold photoelectron spectrum of HO₂ in the 11 eV-12 eV energy range is acquired without interferences from other species and assigned with the aid of theoretically calculated adiabatic ionization energies (AIEs) and Franck-Condon factors. The three vibrational modes of the radical cation HO₂ ⁺, the H-O stretch, the H-O-O bend, and the O-O stretch, have been identified, and their individual frequencies are measured. In addition, the AIEs of the X³A″ ground state and the a¹A' first excited electronic state of HO₂ ⁺ are experimentally determined at 11.359 ± 0.003 eV and 11.639 ± 0.005 eV, respectively, in agreement with high-level theoretically computed results. Furthermore, the former AIE value provides validation of thermochemical networks used to extract the enthalpy of formation of the HO₂ radical.

Photoionization of C4H5 Isomers

Single-photon, photoelectron-photoion coincidence spectroscopy is used to record the mass-selected ion spectra and slow photoelectron spectra of C₄H₅ radicals produced by the abstraction of hydrogen atoms from three C₄H₆ precursors by fluorine atoms generated by a microwave discharge. Three different C₄H₅ isomers are identified, with the relative abundances depending on the nature of the precursor (1-butyne, 1,2-butadiene, and 1,3-butadiene). The results are compared with our previous work using 2-butyne as a precursor [Hrodmarsson, H. R. J. Phys. Chem. A 2019, 123, 1521-1528]. The slow photoelectron spectra provide new information on the three radical isomers that is in good agreement with previous experimental and theoretical results [Lang, M. J. Phys. Chem. A 2015, 119, 3995-4000; Hansen, N. J. Phys. Chem. A 2006, 110, 3670-3678]. The energy scans of the C₄H₅ photoionization signal are recorded with substantially better resolution and signal-to-noise ratio than those in earlier work, allowing the observation of autoionizing resonances based on excited states of the C₄H₅ cation. Photoelectron images recorded at several energies are also reported, providing insight into the decay processes of these excited states. Finally, in contrast to the earlier work using 2-butyne as a precursor, where H-atom abstraction was the only observed process, F- and H-atom additions to the present precursors are also observed through the detection of C₄H₆F, C₄H₅F, and C₄H₇.

Decoupling vibration and electron energy dependencies in the photoelectron circular dichroism of a terpene, 3-carene

A fresh perspective on the interaction of electron and nuclear motions in photon induced dynamical processes can be provided by the coupling of photoelectron angular distributions and cation vibrational states in the photoionization of chiral molecules using circularly polarized radiation. The chiral contributions, manifesting as a forward-backward asymmetry in the photoemission, can be assessed using Photoelectron Circular Dichroism (PECD), which has revealed an enhanced vibrational influence exerted on the outgoing photoelectron. In this paper, we investigate the PECD of a rigid chiral monoterpene, 3-carene, using single-photon vacuum ultraviolet ionization by polarized synchrotron radiation and selecting energies from the ionization threshold up to 19.0 eV. By judicious choice of these photon energies, two factors that influence PECD asymmetry values, electron kinetic energy and ion vibrational level, can be effectively isolated, allowing a clear demonstration of the very marked vibrational effects. A slow photoelectron spectrum is used to examine the vibrational structure of the isolated outermost valence (HOMO) photoelectron band, and peak assignments are made with the aid of a Franck-Condon simulation. Together, these provide an estimate of the adiabatic ionization energy as 8.385 eV. The reported chiral asymmetry from the randomly oriented 3-carene enantiomers reaches a maximum of over 21%. Theoretical PECD calculations, made both for the fixed equilibrium molecular geometry and also modeling selected normal mode vibration effects, are presented to provide further insight.

VUV photoionization dynamics of the C60 buckminsterfullerene: 2D-matrix photoelectron spectroscopy in an astrophysical context

We present the photoionization dynamics of the C₆₀ buckminsterfullerene from threshold up to 14.0 eV recorded with VUV synchrotron radiation at the DESIRS beamline at the SOLEIL synchrotron. The recorded data is obtained using a double-imaging photoelectron photoion coincidence spectrometer and is presented as a two-dimensional photoelectron matrix which contains a wealth of spectroscopic data. We present these data in an astrophysical context which relates to (i) the threshold photoelectron spectrum which is compared to data relevant to the diffuse interstellar bands (DIBs), (ii) the kinetic photoelectron distribution at the Lyman-α line which is relevant to the dominant heating source in the ISM, and (iii) the absolute photoionization cross section of C₆₀ up to approx. 10.5 eV. The photoelectron spectrum implies that the symmetry of the ground state is different than previous theoretical models have predicted, and this result is discussed in context of recent experimental and theoretical findings. Also presented are partial photoionization cross sections of the first two photoelectron bands and their anisotropy parameters. These data are compared with previous theoretical values and discussed where appropriate.

Evidence-based algorithm for the management of acute traumatic retrobulbar haemorrhage

Retrobulbar haemorrhage (RBH) is a potentially blinding consequence of craniofacial trauma, but timely ophthalmic evaluation is difficult to obtain in some settings and clear standards for canthotomy/cantholysis are lacking. We have sought to develop an algorithm to identify vision-threatening traumatic RBH that requires emergent decompression. We retrospectively reviewed 42 consecutive consultations for RBH at a level-one trauma centre. Charts and imaging studies were analysed with attention to mechanism of injury, comorbid trauma, and ophthalmic findings. A total of 22 eyes were observed without intervention, 13 were treated pharmacologically, and seven by emergent canthotomy/cantholysis. No differences in standard trauma metrics were found among these groups. Lid oedema, ecchymosis, chemosis, subconjunctival haemorrhage, and ocular motility also failed to correlate with a need for surgical intervention. "Tight" eyelids (p<0.001), unilateral proptosis (p<0.001), and relative afferent pupillary defect (RAPD; p=0.029), however, all related to a need for canthotomy/cantholysis (Fisher's exact test). Tenting of the globe, which was the only radiographic finding to predict the need for surgery, was seen in just two of the seven cases that required decompression. Many of the traditionally emphasised clinical signs therefore fail to identify cases of RBH that require decompression. Our data support a simple three-factor decision tool. These are: relative proptosis, eyelids that are difficult to open with finger pressure, and presence of an RAPD in the traumatised eye. If all three are noted or if the patient has proptosis and tight lids in the absence of a large preseptal haematoma, he/she is likely to need surgical decompression. Tenting of the globe on computed tomography (CT), while a relatively rare finding, should also alert the physician of the need for intervention.

Study protocol to investigate biomolecular muscle profile as predictors of long-term urinary incontinence in women with gestational diabetes mellitus

BACKGROUND

Pelvic floor muscles (PFM) and rectus abdominis muscles (RAM) of pregnant diabetic rats exhibit atrophy, co-localization of fast and slow fibers and an increased collagen type I/III ratio. However, the role of similar PFM or RAM hyperglycemic-related myopathy in women with gestational diabetes mellitus (GDM) remains poorly investigated. This study aims to assess the frequency of pelvic floor muscle disorders and pregnancy-specific urinary incontinence (PS-UI) 12 months after the Cesarean (C) section in women with GDM. Specifically, differences in PFM/RAM hyperglycemic myopathy will be evaluated.

METHODS

The Diamater is an ongoing cohort study of four groups of 59 pregnant women each from the Perinatal Diabetes Research Centre (PDRC), Botucatu Medical School (FMB)-UNESP (São Paulo State University), Brazil. Diagnosis of GDM and PS-UI will be made at 24-26 weeks, with a follow-up at 34-38 weeks of gestation. Inclusion in the study will occur at the time of C-section, and patients will be followed at 24-48 h, 6 weeks and 6 and 12 months postpartum. Study groups will be classified as (1) GDM plus PS-UI; (2) GDM without PS-UI; (3) Non-GDM plus PS-UI; and (4) Non-GDM without PS-UI. We will analyze relationships between GDM, PS-UI and hyperglycemic myopathy at 12 months after C-section. The mediator variables to be evaluated include digital palpation, vaginal squeeze pressure, 3D pelvic floor ultrasound, and 3D RAM ultrasound. RAM samples obtained during C-section will be analyzed for ex-vivo contractility, morphological, molecular and OMICS profiles to further characterize the hyperglycemic myopathy. Additional variables to be evaluated include maternal age, socioeconomic status, educational level, ethnicity, body mass index, weight gain during pregnancy, quality of glycemic control and insulin therapy.

DISCUSSION

To our knowledge, this will be the first study to provide data on the prevalence of PS-UI and RAM and PFM physical and biomolecular muscle profiles after C-section in mothers with GDM. The longitudinal design allows for the assessment of cause-effect relationships between GDM, PS-UI, and PFMs and RAMs myopathy. The findings may reveal previously undetermined consequences of GDM.

To see C2: Single-photon ionization of the dicarbon molecule

The C₂ carbon cluster is found in a large variety of environments including flames, electric discharges, and astrophysical media. Due to spin-selection rules, assessing a complete overview of the dense vibronic landscape of the C₂ ⁺ cation starting from the ground electronic state X Σg+1 of the neutral is not possible, especially since the C₂ ⁺ ground state is of X⁺ Σg-4 symmetry. In this work, a flow-tube reactor source is employed to generate the neutral C₂ in a mixture of both the lowest singlet X Σg+1 and triplet a ³Π_u electronic states. We have investigated the vibronic transitions in the vicinity of the first adiabatic ionization potential via one-photon ionization with vacuum ultraviolet synchrotron radiation coupled with electron/ion double imaging techniques. Using ab initio calculations and Franck-Condon simulations, three electronic transitions are identified and their adiabatic ionization energy is determined E_i(a^{+  2}Π_u←X ¹Σ_g ⁺)=12.440(10) eV, E_i(X^{+  4}Σ_g ^-←a ³Π_u)=11.795(10) eV, and E_i(a⁺²Π_u ← a³Π_u) = 12.361(10) eV. From the three origin bands, the following energy differences are extracted: ΔE(a - X) = 0.079(10) eV and ΔE(a⁺ - X⁺) = 0.567(10) eV. The adiabatic ionization potential corresponding to the forbidden one-photon transition X⁺ ← X is derived and amounts to 11.873(10) eV, in very good agreement with the most recent measurement by Krechkivska et al. [J. Chem. Phys. 144, 144305 (2016)]. The enthalpy of formation of the doublet ground state C₂ ⁺ cation in the gas phase is determined at 0 K, Δ_fH⁰(0K)(C₂ ⁺(Πu2))=2019.9(10) kJ mol^-1. In addition, we report the first experimental ion yield of C₂ for which only a simple estimate was used up to now in the photochemistry models of astrophysical media due to the lack of experimental data.

Photoelectron spectroscopy of boron-containing reactive intermediates using synchrotron radiation: BH2, BH, and BF

Mass selected slow photoelectron spectra (SPES) of three boron-containing reactive species, BH₂, BH, and BF were recorded by double imaging photoion-photoelectron coincidence spectroscopy (i²PEPICO) using synchrotron radiation. All species were generated in a flow reactor from the H-abstraction of B₂H₆ by F atoms created in a F₂ microwave discharge. The spectrum of BH₂⁺ exhibits a long bending mode progression with a 970 cm^-1 spacing due to the large geometry change from bent to linear upon ionization. Its ionization energy was determined as 8.12 ± 0.02 eV. For BH, photoionisation from both X¹Σ⁺ singlet and a³Π triplet state was observed, permitting the experimental determination of the singlet/triplet gap (ΔE_ST) from the observed IE's of 9.82 eV and 8.48 eV. In addition, a threshold photoelectron spectrum of BF was recorded, which leads to an IE of 11.11 eV and an improved value for ν_BF⁺ of 1690 cm^-1. All spectra were simulated by calculating Franck-Condon factors from optimised structures based on quantum chemical calculations.

Isomer-sensitive characterization of low temperature oxidation reaction products by coupling a jet-stirred reactor to an electron/ion coincidence spectrometer: case of n-pentane

Using a tunable vacuum ultraviolet synchrotron beam line and first principle computations, a jet-stirred reactor was coupled for the first time to a photoionization mass spectrometer using electron/ion coincidence imaging.

High resolution vibronic state-specific dissociation of NO2+in the 10.0–15.5 eV energy range by synchrotron double imaging photoelectron photoion coincidence

Low-lying electronic states of NO₂⁺are prepared with vibrational structures and their state-specific dissociation mechanisms are unraveled with high-resolution i²PEPICO.

Identifying isomers of peroxy radicals in the gas phase: 1-C3H7O2vs. 2-C3H7O2

The two isomers of propylperoxy radical 1-C₃H₇O₂ and 2-C₃H₇O₂, together with their rotamers, are individually identified and assigned.