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Noack K, Dilk C, Schirmer M, Kiefer J, Buchholz R, Leipertz A. Aufnahme und Verarbeitung Raman-spektroskopischer Signale zur Überwachung von Algenkultivierungen. CHEM-ING-TECH 2012. [DOI: 10.1002/cite.201250060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Kiefer J, Zehentbauer F, Frank K, Schuchmann H. Spektroskopische Untersuchung der Stabilisierung von Emulsionen in der Lebensmittelverfahrenstechnik. CHEM-ING-TECH 2012. [DOI: 10.1002/cite.201250407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Kiefer J, Daigeler A, Lehnhardt M. [The medical treatment of Kim Phúc at the BG Unfallklinik Ludwigshafen]. HANDCHIR MIKROCHIR P 2012; 44:259-62. [PMID: 22618160 DOI: 10.1055/s-0032-1311638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022] Open
Abstract
The Vietnam War was a military conflict in Vietnam during the Cold War that followed the First Indochina War. This war was fought between North Vietnam, supported by its communist allies, and the government of South Vietnam, supported by the USA and other anti-communist countries. Kim Phúc is the child depicted in the Pulitzer Prize winning photograph taken on June 8, 1972 by AP photographer Nick Út. The iconic photo shows her at about nine years of age running naked on a road amid the chaos after being severely burned by a napalm attack. After 14 months of hospital stay and 17 surgical procedures Kim Phúc was able to return home. Since then, she was used as a propaganda symbol by the communist government of Vietnam. To continue her studies, Kim was granted permission to move to Cuba where she met her future husband. However, the sequelae of her burn wounds affected her everyday life enormously. In 1984, with the support of the international aid organization "terre des hommes" and the German magazine "STERN", Kim Phúc got the opportunity to meet and get treated by Professor Zellner. Professor Peter Rudolph Zellner was the first chief of the Department of Hand, Plastic and Reconstructive Surgery, Burn Center, BG Trauma Center Ludwigshafen, and one of the founder members of the German Society of Plastic Surgeons. The reconstructive surgeries provide Kim Phúc an almost normal life. Later on, she was involved in international aid organizations; she was named a UNESCO Goodwill Ambassador and she was awarded several honorary Doctorates of Law. Kim Phúc became a Canadian citizen. Today, she lives with her husband and two children in Ontario, Canada.
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O'Shaughnessy J, Craig DW, Kiefer J, Sinari S, Moses TM, Wong S, Aldrich J, Christoforides A, Dinh J, Itzatt T, Blum J, Kurdoglu A, Salhia B, Baker A, Siddiqui A, Hoang L, Billings P, Trent JM, Mousses S, Von Hoff D, Carpten JD. S3-5: Next Generation Sequencing Reveals Co-Activating Events in the MAPK and P13K/AKT Pathways in Metastatic Triple Negative Breast Cancers. Cancer Res 2011. [DOI: 10.1158/0008-5472.sabcs11-s3-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
INTRODUCTION: The clinical application of next generation sequencing to comprehensively characterize groups of driving mutations in individual metastatic triple negative breast cancer (mTNBC) genomes has the potential to reveal therapeutically relevant pathway dependencies. Towards this end, we harvested tissue from 14 patients with mTNBC and are conducting deep whole genome and transcriptome sequencing for each case to identify mutations that can guide therapeutic targeting within available phase I/II clinical trials.
METHODS: Metastatic tumor tissue was harvested from 14 mTNBC patients, and 7 samples have undergone total genome and transcriptome sequencing with the others currently underway. We are utilizing the Life Technologies SOLiD® system to sequence germline and tumor DNA to sufficient depth to identify somatic genome alterations including point mutations, indels, and structural events including translocations. Furthermore, RNA-seq is being performed on these tumors, along with a series of age- and ethnicity-matched normal breast controls to perform deep differential expression analysis, isoform expression analysis, and fusion transcript detection. Our team of genome scientists and clinical oncologists are evaluating the sequencing findings and are prioritizing the investigational therapeutic options for each patient.
RESULTS: Our whole genome and transcriptome sequencing study has revealed numerous known and novel mutations in mTNBC. However, all patients’ cancers analyzed to date had alterations that would activate the MAPK pathway, but through various mechanisms in different patients. These include BRAF amplification and overexpression, NF1 homozygous deletion, and consistent IQGAP3 overexpression. Furthermore, all patients’ cancers also harbor mutations that would activate the PI3K/AKT pathway including PTEN homozygous deletion or down-regulation, consistent INPP4B down-regulation, FBXW7 homozygous deletion, and ERAS overexpression. Moreover, although we and others show ERBB4 down-regulation in breast tumors, we are the first to report unique somatic genomic events that significantly alter the ERBB4 locus leading to its loss in the majority (5/7) of our patients’ tumors. Importantly, we are beginning to use these insights to prioritize therapeutic targeting and have observed that one chemotherapy-refractory mTNBC patient, with a high-level BRAF amplification/overexpression along with down-regulation of PTEN and INPP4B, had a major response to combined mek plus akt inhibitors on a phase I study.
CONCLUSIONS: Comprehensive genomic and transcriptomic interrogation of mTNBCs has revealed events supporting co-activation of the MAPK and PI3K/AKT pathways in all the tumors albeit by different mutational mechanisms and supports potential effectiveness of combination therapy in the treatment of mTNBC. We plan to treat these patients with combined mek plus akt inhibitors on a new phase I study beginning in August 2011 to determine the effectiveness of co-inhibition of these pathways based on this frequent genomic context.
Citation Information: Cancer Res 2011;71(24 Suppl):Abstract nr S3-5.
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Kiefer J, Biskupek H, v. Neukirch C. Manuelle Therapie bei entzündlich-rheumatischen Erkrankungen. MANUELLE MEDIZIN 2011. [DOI: 10.1007/s00337-011-0866-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Kiefer J, Hollenbeck S, Woo S, Earle S, Erdmann D, Levin L. LOP05: IMPACT OF SYSTEMIC INJURY ON FREE FLAP OUTCOMES IN TRAUMA PATIENTS. Plast Reconstr Surg 2011. [DOI: 10.1097/01.prs.0000400358.24532.af] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Eichmann SC, Weschta M, Kiefer J, Seeger T, Leipertz A. Characterization of a fast gas analyzer based on Raman scattering for the analysis of synthesis gas. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2010; 81:125104. [PMID: 21198048 DOI: 10.1063/1.3521397] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
A sensor system for fast analysis of synthesis gas (mixtures of CO and H(2)) is proposed and characterized. The system is based on spontaneous Raman scattering, which enables simultaneous concentration measurements of all relevant species. For typical synthesis gas applications, this system has to face large variations of temperature and pressure. In addition, strong fluctuations in mixture composition may occur, which lead to rather inconvenient signal intensities. In this paper, we describe a low resolution spectrometer designed to function as a synthesis gas sensor and characterize pressure and temperature effects on concentration measurements. In addition, the use of different spectral ranges and calibration strategies is investigated in view of measurement accuracy and precision.
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Kiefer J, Danova K, Popovska N, Sommer R, Leipertz A. Monitoring der chemischen Gasphasenabscheidung in einem Wirbelschichtreaktor. CHEM-ING-TECH 2010. [DOI: 10.1002/cite.201050022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Noack K, Izydor M, Ebel N, Kiefer J, Schlücker E, Leipertz A. Raman-Untersuchung des Hochdruckeinflusses auf die Molekularstruktur. CHEM-ING-TECH 2010. [DOI: 10.1002/cite.201050403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Zwanzig R, Kiefer J, Weiss GH. On the validity of the kirkwood-riseman theory. Proc Natl Acad Sci U S A 2010; 60:381-6. [PMID: 16591642 PMCID: PMC225058 DOI: 10.1073/pnas.60.2.381] [Citation(s) in RCA: 70] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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Ruiz C, Holz D, Oeggerli M, Schneider S, Kiefer J, Gonzales I, Zellweger T, Barrett M, Azorsa D, Bubendorf L. 48 Amplification and overexpression of vinculin are associated with increased tumour cell proliferation and progression in advanced prostate cancer. EJC Suppl 2010. [DOI: 10.1016/s1359-6349(10)70857-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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Mousses S, Kiefer J, Von Hoff D, Trent J. Using biointelligence to search the cancer genome: an epistemological perspective on knowledge recovery strategies to enable precision medical genomics. Oncogene 2009; 27 Suppl 2:S58-66. [DOI: 10.1038/onc.2009.354] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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Brockmeier SJ, Peterreins M, Lorens A, Vermeire K, Helbig S, Anderson I, Skarzynski H, Van de Heyning P, Gstoettner W, Kiefer J. Music perception in electric acoustic stimulation users as assessed by the Mu.S.I.C. test. Adv Otorhinolaryngol 2009; 67:70-80. [PMID: 19955723 DOI: 10.1159/000262598] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
AIMS This study compared the music perception abilities of 13 electric acoustic stimulation (EAS) users with two control groups: unilateral cochlear implant (CI) users and normal-hearing (NH) listeners. METHODS Groups were matched according to age and musical experience before hearing loss (HL) and tested using the Musical Sounds in Cochlear Implants (Mu.S.I.C.) test. RESULTS No difference was found on rhythm perception, chord discrimination, dissonance rating, and emotion rating subtest performance between groups. Mean frequency discrimination scores were significantly better in EAS participants than in CI participants and not significantly worse than in NH participants. However, the EAS and CI groups scored similarly (significantly worse than NH participants) on both instrument detection and identification. Results for EAS participants were not significantly worse when the hearing aid component was removed. Frequency of listening to music before HL was negatively correlated with EAS participants' frequency discrimination scores, though singing and playing an instrument appeared to have no effect. EAS participants who indicated many reasons for listening to music and who listen to many genres after implantation scored higher on instrument detection and instrument identification. Better results on these two subtests were correlated with EAS participants' better postoperative auditory thresholds at 250 and 500 Hz. CONCLUSIONS Though EAS participants performed better on music perception testing (though not timbre-based tasks) than CI participants, their scores did not reach the level of NH participants. This indicates that acoustic hearing in the low frequencies is helpful for music perception, though not the only important factor.
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Jolly C, Garnham C, Mirzadeh H, Truy E, Martini A, Kiefer J, Braun S. Electrode features for hearing preservation and drug delivery strategies. Adv Otorhinolaryngol 2009; 67:28-42. [PMID: 19955719 DOI: 10.1159/000262594] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
BACKGROUND/AIMS Reducing the risk of hearing loss after cochlear implantation requires optimization of the electrode array to minimize the physical trauma caused by insertion and placement. Furthermore, the electrode design must be optimized for atraumatic surgical approaches. Even greater levels of protection may be achieved by the use of a drug during and after implantation. The electrode array offers a potential vehicle for drug delivery. METHODS This article reviews the laboratory and clinical data available thus far relating to the importance of electrode design parameters for trauma minimization, and the possibility of further reduction through pharmaceutical intervention. Candidate drugs were identified through literature review and laboratory evaluation. The most promising have been investigated in vitro and in animal models of implantation trauma. Three delivery devices are currently under development to satisfy the specific demands of different therapy regimes. The delivery profiles of each were evaluated through both modelling and bench testing and the concepts investigated in vitro and in vivo. RESULTS Current evidence favours a thin, flexible electrode array with wires in a zigzag shape. Steroids and an apoptosis inhibitor (AM111) performed well in animal models of electrode trauma and are both good drug candidates for reduction of the risk of hearing loss after implantation. Semi-chronic dexamethasone elution, acute drug delivery by intracochlear catheter, and longer-term delivery through diffusion from a reservoir were all shown to be feasible. CONCLUSION An extensive programme focussed on minimizing hearing loss through device optimization and the development of new technologies has yielded positive results and new concepts for further development and clinical application.
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Kiefer J, Flügel A, Sommer R, Leipertz A, Kurland HD, Grabow J, Staupendahl G, Müller F. TIRE-LII-Untersuchungen an LAVA-generierten Eisenoxid-Nanopartikeln. CHEM-ING-TECH 2009. [DOI: 10.1002/cite.200950045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Noack K, Kiefer J, Leipertz A. Untersuchung des Einflusses von Kosolventen auf organische Lösungsmittel. CHEM-ING-TECH 2009. [DOI: 10.1002/cite.200950044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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Kiefer J, Ebel N, Dörfler A, Noack K, Becker P, Schlücker E, Leipertz A. Spektroskopische Charakterisierung der Inaktivierung von Escherichia coli. CHEM-ING-TECH 2009. [DOI: 10.1002/cite.200950046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Akpa TC, Weber KJ, Schneider E, Kiefer J, Frankenberg-Schwager M, Harbich R, Frankenberg D. Heavy Ion-induced DNA Double-strand Breaks in Yeast. Int J Radiat Biol 2009; 62:279-87. [PMID: 1356130 DOI: 10.1080/09553009214552121] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
DNA double-strand break (dsb) induction in diploid yeast was measured by neutral sucrose sedimentation after exposure to very heavy ions with values of linear energy transfer (LET) ranging from about 300 to 11500 ke V/microns. Linear fluence dependencies were found in all cases from which dsb production cross-sections (sigma dsb) could be calculated. Corresponding cross-sections for cell killing (sigma i) were derived from final slopes of survival curves measured in parallel and for the same fluence range. A close correlation was found between sigma i and sigma dsb. It is calculated that over the entire LET range, including 30 MeV electron irradiation, about 22 dsb are induced per lethal event when high exposures are considered.
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Yuzyuk T, Fakhouri THI, Kiefer J, Mango SE. The polycomb complex protein mes-2/E(z) promotes the transition from developmental plasticity to differentiation in C. elegans embryos. Dev Cell 2009; 16:699-710. [PMID: 19460346 DOI: 10.1016/j.devcel.2009.03.008] [Citation(s) in RCA: 84] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2008] [Revised: 01/08/2009] [Accepted: 03/06/2009] [Indexed: 12/19/2022]
Abstract
We have used expression profiling and in vivo imaging to characterize Caenorhabditis elegans embryos as they transit from a developmentally plastic state to the onset of differentiation. Normally, this transition is accompanied by activation of developmental regulators and differentiation genes, downregulation of early-expressed genes, and large-scale reorganization of chromatin. We find that loss of plasticity and differentiation onset depends on the Polycomb complex protein mes-2/E(Z). mes-2 mutants display prolonged developmental plasticity in response to heterologous developmental regulators. Early-expressed genes remain active, differentiation genes fail to reach wild-type levels, and chromatin retains a decompacted morphology in mes-2 mutants. By contrast, loss of the developmental regulators pha-4/FoxA or end-1/GATA does not prolong plasticity. This study establishes a model by which to analyze developmental plasticity within an intact embryo. mes-2 orchestrates large-scale changes in chromatin organization and gene expression to promote the timely loss of developmental plasticity. Our findings indicate that loss of plasticity can be uncoupled from cell fate specification.
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Kiefer J, Leipertz A. Bestimmung des Diffusionskoeffizienten mittels Fließinjektionsanalyse. CHEM-ING-TECH 2009. [DOI: 10.1002/cite.200800174] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Kiefer J, Obert K, Bösmann A, Seeger T, Wasserscheid P, Leipertz A. Quantitative IR-spektroskopische Detektion von Zucker in ionischen Flüssigkeiten. CHEM-ING-TECH 2008. [DOI: 10.1002/cite.200750545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Kiefer J, Schorsch S, Seeger T, Leipertz A. Online-Analyse der Zusammensetzung von Brenngasen mittels Raman-Spektroskopie. CHEM-ING-TECH 2007. [DOI: 10.1002/cite.200750080] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Baus C, Kiefer J, Brauch HJ. Auswirkungen des zunehmenden Einsatzes von Biokraftstoffen auf die Trinkwasserversorgung. CHEM-ING-TECH 2006. [DOI: 10.1002/cite.200650215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Staudenmaier R, Steinbach S, Niedermeyer HP, Kiefer J, Müller D, Kleinsasser N, Reichert TE, Driemel O. [Correction of ear malformations with autologous rib cartilage]. MUND-, KIEFER- UND GESICHTSCHIRURGIE : MKG 2006; 10:141-7. [PMID: 16555092 DOI: 10.1007/s10006-006-0682-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
INTRODUCTION Ear malformations are mainly isolated deformations but exist also in combination with various syndromes. A visible malformation in cases of microtia is a problem for the entire family. Auricular reconstruction with autologous cartilage has been well established in the last decade. Optimization of the technique has led to improved and reliable results. OPERATION AND RESULTS Based on the experience of 120 cases we developed a concept that allows total ear reconstruction in two operative steps. In the first operation autologous rib cartilage is harvested and a natural framework is created following the template from the opposite ear. The ear remnant is transposed and the framework placed in a subcutaneous pocket on the mastoid plane. After a healing period of around 6 weeks the second operation reconstructs the auricular projection and the retroauricular fold. CONCLUSION Based on an individualized surgical treatment, auricular reconstruction with autologous rib cartilage are possible from the age of around 8 to the advanced period of life with reproducibly good results.
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