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McBride TO, Pogue BW, Jiang S, Osterberg UL, Paulsen KD, Poplack SP. Initial studies of in vivo absorbing and scattering heterogeneity in near-infrared tomographic breast imaging. OPTICS LETTERS 2001; 26:822-4. [PMID: 18040462 DOI: 10.1364/ol.26.000822] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Simultaneously recovered absorption and scattering images that separate these optical property features within the female breast are demonstrated from frequency-domain measurements. A study of known absorbing and scattering objects is presented as a foundation for interpreting these in vivo images once the contrast space has been fully characterized. No measurable influence of absorbing-object contrast appears in the scattering images, whereas localized scattering contrast enhances the corresponding region within the absorption image by approximately 30% (e.g., a 2:1 scatterer also reconstructs as an approximately 1.3:1 absorber). Scattering and absorption images of a female volunteer with a 3.4-cm fibroadenoma show a clear 2:1 localized increase in absorption coefficient with little or no evidence of scattering enhancement in the lesion.
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Van Houten EE, Miga MI, Weaver JB, Kennedy FE, Paulsen KD. Three-dimensional subzone-based reconstruction algorithm for MR elastography. Magn Reson Med 2001; 45:827-37. [PMID: 11323809 DOI: 10.1002/mrm.1111] [Citation(s) in RCA: 129] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Accurate characterization of harmonic tissue motion for realistic tissue geometries and property distributions requires knowledge of the full three-dimensional displacement field because of the asymmetric nature of both the boundaries of the tissue domain and the location of internal mechanical heterogeneities. The implications of this for magnetic resonance elastography (MRE) are twofold. First, for MRE methods which require the measurement of a harmonic displacement field within the tissue region of interest, the presence of 3D motion effects reduces or eliminates the possibility that simpler, lower-dimensional motion field images will capture the true dynamics of the entire stimulated tissue. Second, MRE techniques that exploit model-based elastic property reconstruction methods will not be able to accurately match the observed displacements unless they are capable of accounting for 3D motion effects. These two factors are of key importance for MRE techniques based on linear elasticity models to reconstruct mechanical tissue property distributions in biological samples. This article demonstrates that 3D motion effects are present even in regular, symmetric phantom geometries and presents the development of a 3D reconstruction algorithm capable of discerning elastic property distributions in the presence of such effects. The algorithm allows for the accurate determination of tissue mechanical properties at resolutions equal to that of the MR displacement image in complex, asymmetric biological tissue geometries. Simulation studies in a realistic 3D breast geometry indicate that the process can accurately detect 1-cm diameter hard inclusions with 2.5x elasticity contrast to the surrounding tissue.
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Meaney PM, Paulsen KD, Pogue BW, Miga MI. Microwave image reconstruction utilizing log-magnitude and unwrapped phase to improve high-contrast object recovery. IEEE TRANSACTIONS ON MEDICAL IMAGING 2001; 20:104-116. [PMID: 11321590 DOI: 10.1109/42.913177] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Reconstructing images of large high-contrast objects with microwave methods has proved difficult. Successful images have generally been obtained by using a priori information to constrain the image reconstruction to recover the correct electromagnetic property distribution. In these situations, the measured electric field phases as a function of receiver position around the periphery of the imaging field-of-view vary rapidly often undergoing changes of greater than pi radians especially when the object contrast and illumination frequency increase. In this paper, we introduce a modified form of a Maxwell equation model-based image reconstruction algorithm which directly incorporates log-magnitude and phase of the measured electric field data. By doing so, measured phase variation can be unwrapped and distributed over more than one Rieman sheet in the complex plane. Simulation studies and microwave imaging experiments demonstrate that significant image quality enhancements occur with this approach for large high-contrast objects. Simple strategies for visualizing and unwrapping phase values as a function of the transmitter and receiver positions within our microwave imaging array are described. Metrics of the degree of phase variation expressed in terms of the amount and extent of phase wrapping are defined and found to be figures-of-merit which estimate when it is critical to deploy the new image reconstruction approach. In these cases, the new algorithm recovers high-quality images without resorting to the use of a priori information on object contrast and/or size as previously required.
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Hartov A, Kerner TE, Markova MT, Osterman KS, Paulsen KD. Dartmouth's next generation EIS system: preliminary hardware considerations. Physiol Meas 2001; 22:25-30. [PMID: 11236886 DOI: 10.1088/0967-3334/22/1/304] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Our previous system covered the frequency range of 0 to 1 MHz. In this new design we propose to cover the range from 0 to 10 MHz. The higher frequencies have forced us to reconsider several design decisions in view of both the physics of the problem and the performance of available electronic components. In this presentation we examine in detail the constraints faced by the designer, starting from wiring consideration to measurement techniques. We will also present the solutions we selected to overcome the limitations we discovered. The problems include phase detection, amplitude measurements, system organization and layout and finally system calibration.
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Pogue BW, Geimer S, McBride TO, Jiang S, Osterberg UL, Paulsen KD. Three-dimensional simulation of near-infrared diffusion in tissue: boundary condition and geometry analysis for finite-element image reconstruction. APPLIED OPTICS 2001; 40:588-600. [PMID: 18357035 DOI: 10.1364/ao.40.000588] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Imaging of tissue with near-infrared spectral tomography is emerging as a practicable method to map hemoglobin concentrations within tissue. However, the accurate recovery of images by using modeling methods requires a good match between experiments and the model prediction of light transport in tissue. We illustrate the potential for a match between (i) three-dimensional (3-D) frequency-domain diffusion theory, (ii) two-dimensional diffusion theory, (iii) Monte Carlo simulations, and (iv) experimental data from tissue-simulating phantoms. Robin-type boundary conditions are imposed in the 3-D model, which can be implemented with a scalar coupling coefficient relating the flux through the surface to the diffuse fluence rate at the same location. A comparison of 3-D mesh geometries for breast imaging indicates that relative measurements are sufficiently similar when calculated on either cylindrical or female breast shapes, suggesting that accurate reconstruction may be achieved with the simpler cylindrical mesh. Simulation studies directly assess the effects from objects extending out of the image plane, with results suggesting that spherically shaped objects reconstruct at lower contrast when their diameters are less than 15-20 mm. The algorithm presented here illustrates that a 3-D forward diffusion model can be used with circular tomographic measurements to reconstruct two-dimensional images of the interior absorption coefficient.
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Kerner TE, Harto A, Osterman KS, DeLorenzo C, Paulsen KD. An improved data acquisition method for electrical impedance tomography. Physiol Meas 2001; 22:31-8. [PMID: 11236887 DOI: 10.1088/0967-3334/22/1/305] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Isaacson, Cheney and Seager have demonstrated that simultaneously applying trigonometric patterns of current to a circular electrode array optimizes the sensitivity of EIT to inner structure. We have found that it is less desirable to measure voltage at an electrode that also applies a current due to variable contact impedance. In order to preserve the optimum sensitivity while minimizing the effect of electrode artefacts, we have devised an approach where we sequentially apply a current between each individual electrode and a separate, fixed ground while measuring voltages at all other electrodes for each consecutive current impulse. By adding weighted sums of both the applied currents and corresponding measured voltages from individual passes, we can synthesize trigonometric patterns of any spatial frequency. Since only one of the electrodes in any given acquired data set is used as a source, this approach significantly dilutes the effect of contact impedance on the resulting voltage measurements. We present simulated data showing the equivalency between the synthesized and actual trigonometric excitation patterns. In addition, we report experimental data, both in vitro and in vivo, that show improved results using this data acquisition technique.
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Pogue BW, Poplack SP, McBride TO, Wells WA, Osterman KS, Osterberg UL, Paulsen KD. Quantitative hemoglobin tomography with diffuse near-infrared spectroscopy: pilot results in the breast. Radiology 2001; 218:261-6. [PMID: 11152812 DOI: 10.1148/radiology.218.1.r01ja51261] [Citation(s) in RCA: 257] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
The authors describe what is, to the best of their knowledge, the first quantitative hemoglobin concentration images of the female breast that were formed with model-based reconstruction of near-infrared intensity-modulated tomographic data. The results in 11 patients, including two with breast tumors with pathologic correlation, are summarized. Hemoglobin concentration appears to correlate with tumor vascularity without the need for exogenous contrast material and thereby has intrinsic diagnostic value.
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Pogue BW, Paulsen KD, O'Hara JA, Wilmot CM, Swartz HM. Estimation of oxygen distribution in RIF-1 tumors by diffusion model-based interpretation of pimonidazole hypoxia and eppendorf measurements. Radiat Res 2001; 155:15-25. [PMID: 11121211 DOI: 10.1667/0033-7587(2001)155[0015:eoodir]2.0.co;2] [Citation(s) in RCA: 78] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Numerical simulations of oxygen diffusion from the capillaries in tumor tissue were used to predict the capillary oxygen supply within and near hypoxic regions of the RIF-1 tumor. A finite element method to simulate the oxygen distribution from a histology section is presented, along with a method to iteratively estimate capillary oxygen concentrations. Pathological structural data for these simulations came from sections of the tumor stained with hematoxylin and eosin and were used to define the capillary positions and shapes, while overlapping regions of low oxygen concentration were defined by the hypoxia marker pimonidazole. These simulations were used to calculate spatial maps of the oxygen concentration and were tested for their ability to reproduce Eppendorf pO(2) histograms from the same tumor line. This simulation study predicted that capillary oxygen concentrations ranged from zero to above 20 microM, with a dominant peak in the hypoxic regions showing 78% of capillaries with less than 1 microM oxygen concentration, compared to only 12% in the non-hypoxic regions. The results were not highly sensitive to the metabolic oxygen consumption rate, within the range of 2 to 16 microM/s. This numerical method for oxygen capillary simulation is readily adaptable to histology sections and provides a method to examine the heterogeneity of oxygen within the capillaries and throughout the tumor tissue section being examined.
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Pogue BW, Willscher C, McBride TO, Osterberg UL, Paulsen KD. Contrast-detail analysis for detection and characterization with near-infrared diffuse tomography. Med Phys 2000; 27:2693-700. [PMID: 11190952 DOI: 10.1118/1.1323984] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
Near-infrared (NIR) diffuse tomography is emerging as a medical imaging modality for obtaining information related to tissue hemoglobin concentration and oxygen saturation and may be used for characterizing diseased tissues such as breast cancer. The optimal methodology for NIR image reconstruction remains an ongoing research problem with several new approaches being demonstrated in recent years. However, a comparison of reconstruction methods is problematic because tools for the objective assessment of image quality have yet to be clearly defined for this type of nonlinear reconstruction problem. Contrast-detail analysis has become an accepted assessment tool to quantify x-ray mammography image quality, and in this study it has been applied to a prototype NIR diffuse tomography system that is being evaluated for breast cancer characterization. The minimum detectable levels of contrast have been defined for different sizes of objects, and the minimum contrasts which can be accurately reconstructed have also been determined for the same object sizes. In general, objects 8 mm and larger in diameter can be accurately reconstructed and detected for most absorption contrasts which are observed in human tissues (i.e., greater than 1% contrast in absorption). Objects as small as 2 mm can be detected with high contrast (i.e., near 100%), but cannot be accurately reconstructed. Within the size range of 2 mm to 8 mm, there is an inverse correlation between contrast and detail size which is characteristic of the total noise in the system. This analysis provides an objective method for assessing detection and characterization limits and can be applied to future improvements in hardware system architecture as well as reconstruction algorithms.
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Pallatroni H, Hartov A, McInerney J, Platenik LA, Miga MI, Kennedy FE, Paulsen KD, Roberts DW. Coregistered ultrasound as a neurosurgical guide. Stereotact Funct Neurosurg 2000; 73:143-7. [PMID: 10853122 DOI: 10.1159/000029775] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
INTRODUCTION The dynamic nature and three dimensionality of ultrasound data can be utilized to enhance the capabilities of image guidance systems. METHODS Coregistration of ultrasound data was done using an electromagnetic digitizer, and subsequent ultrasound images were correlated with preoperative MRI studies. Thirty-two patients undergoing craniotomy were investigated in this manner. RESULTS Phantom testing done with a rigid stylus and 3D ultrasound tracker demonstrated an accuracy of 1.36 +/- 1.67 mm in determining the location of a point. Thirty-two clinical cases were coregistered without difficulty. CONCLUSION Coregistered ultrasound is a useful methodology that can aid in neuronavigation.
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Miga MI, Roberts DW, Hartov A, Eisner S, Lemery J, Kennedy FE, Paulsen KD. Updated neuroimaging using intraoperative brain modeling and sparse data. Stereotact Funct Neurosurg 2000; 72:103-6. [PMID: 10853059 DOI: 10.1159/000029707] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
A strategy to update preoperative imaging for image-guided surgery using readily available intraoperative information has been developed and implemented. A patient-specific three-dimensional finite element model of the brain is generated from preoperative MRI and used to simulate deformation resulting from multiple surgical processes. Intraoperatively obtained sparse imaging data, such as from digital cameras or ultrasonography, is then used to prescribe the displacement of selected points within the model. Interpolation to the resolution of preoperative imaging may then be performed based upon the model. The algorithms for generation of the finite element model and for its subsequent deformation have been successfully validated using a pig brain model, and preliminary clinical application in the operating room has demonstrated feasibility.
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Miga MI, Paulsen KD, Hoopes PJ, Kennedy FE, Hartov A, Roberts DW. In vivo modeling of interstitial pressure in the brain under surgical load using finite elements. J Biomech Eng 2000; 122:354-63. [PMID: 11036558 DOI: 10.1115/1.1288207] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Current brain deformation models have predominantly reflected solid constitutive relationships generated from empirical ex vivo data and have largely overlooked interstitial hydrodynamic effects. In the context of a technique to update images intraoperatively for image-guided neuronavigation, we have developed and quantified the deformation characteristics of a three-dimensional porous media finite element model of brain deformation in vivo. Results have demonstrated at least 75-85 percent predictive capability, but have also indicated that interstitial hydrodynamics are important. In this paper we investigate interstitial pressure transient behavior in brain tissue when subjected to an acute surgical load consistent with neurosurgical events. Data are presented from three in vivo porcine experiments where subsurface tissue deformation and interhemispheric pressure gradients were measured under conditions of an applied mechanical deformation and then compared to calculations with our three-dimensional brain model. Results demonstrate that porous-media consolidation captures the hydraulic behavior of brain tissue subjected to comparable surgical loads and that the experimental protocol causes minimal trauma to porcine brain tissue. Working values for hydraulic conductivity of white and gray matter are also reported and an assessment of transient pressure gradient effects with respect to deformation is provided.
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Pogue BW, Paulsen KD, Abele C, Kaufman H. Calibration of near-infrared frequency-domain tissue spectroscopy for absolute absorption coefficient quantitation in neonatal head-simulating phantoms. JOURNAL OF BIOMEDICAL OPTICS 2000; 5:185-93. [PMID: 10938782 DOI: 10.1117/1.429985] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/1999] [Accepted: 11/22/1999] [Indexed: 05/18/2023]
Abstract
Frequency-domain tissue spectroscopy is a method to measure the absolute absorption coefficient of bulk tissues, assuming that a representative model can be found to recover the optical properties from measurements. While reliable methods exist to calculate absorption coefficients from source-detector measurements less than a few centimeters apart along a flat tissue volume, it is less obvious what methods can be used for transmittance through the larger tissue volumes typically associated with neonatal cerebral monitoring. In this study we compare the use of multiple distance frequency-domain measurements processed with (i) a modified Beer-Lambert law method, (ii) an analytic infinite-medium diffusion theory expression, and (iii) a numerical finite element solution of the diffusion equation, with the goal of recovering the absolute absorption coefficient of the medium. Based upon our observations, the modified Beer-Lambert method provides accurate absolute changes in the absorption coefficient, while analytic infinite-medium diffusion theory solutions or finite element-based numerical solutions can be used to calculate the absolute absorption coefficient, assuming that the data can be measured at multiple source-detector distances. We recommend that the infinite-medium multi-distance method or the finite element method be used across large tissue regions for calculation of the absolute absorption coefficient using frequency-domain near-infrared measurements at multiple positions along the head.
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Kerner TE, Williams DB, Osterman KS, Reiss FR, Hartov A, Paulsen KD. Electrical impedance imaging at multiple frequencies in phantoms. Physiol Meas 2000; 21:67-77. [PMID: 10720001 DOI: 10.1088/0967-3334/21/1/309] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
We have recently built and tested a 32 channel, multi-frequency (1 kHz to 1 MHz) voltage mode system to investigate electrical impedance spectroscopy (EIS) imaging. We completed a series of phantom experiments to define the baseline imaging performance of our system. Our phantom consisted of a plastic circular tank (20 cm diameter) filled with 0.9% aqueous NaCl solution. Conductors and nonconductors of decreasing width (W5: 3.4 cm, W4: 2.54 cm, W3: 0.95 cm, W2: 0.64 cm and WI: 0.32 cm) were positioned at various distances from the tank edge (1 cm, 2 cm, 4 cm and 8 cm). The results suggest that the detection of objects less than 1 cm in width is limited to the first 1 to 2 cm from the tank edge for absolute images, but this depth can extend to 8 cm in difference images. Larger 3.4 cm wide objects can be detected in absolute images at depths up to 8 cm from the tank edge. Generally, conductor images were clearer than their nonconductor counterparts. Not only did electrode artefacts lessen as the frequency increased, but the system's maximum resolution was attained at the highest operating frequencies. Although the system recovered the value of the electrical conductivity at the correct order of magnitude, it tended to smooth out large property discontinuities. The calculated electrical permittivity in these phantom studies was inconclusive due to the presence of electrode artefacts.
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Miga MI, Paulsen KD, Hoopes PJ, Kennedy FE, Hartov A, Roberts DW. In vivo quantification of a homogeneous brain deformation model for updating preoperative images during surgery. IEEE Trans Biomed Eng 2000; 47:266-73. [PMID: 10721634 DOI: 10.1109/10.821778] [Citation(s) in RCA: 87] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Clinicians using image-guidance for neurosurgical procedures have recently recognized that intraoperative deformation from surgical loading can compromise the accuracy of patient registration in the operating room. While whole brain intraoperative imaging is conceptually appealing it presents significant practical limitations. Alternatively, a promising approach may be to combine incomplete intraoperatively acquired data with a computational model of brain deformation to update high resolution preoperative images during surgery. The success of such an approach is critically dependent on identifying a valid model of brain deformation physics. Towards this end, we evaluate a three-dimensional finite element consolidation theory model for predicting brain deformation in vivo through a series of controlled repeat-experiments. This database is used to construct an interstitial pressure boundary condition calibration curve which is prospectively tested in a fourth validation experiment. The computational model is found to recover 75%-85% of brain motion occurring under loads comparable to clinical conditions. Additionally, the updating of preoperative images using the model calculations is presented and demonstrates that model-updated image-guided neurosurgery may be a viable option for addressing registration errors related to intraoperative tissue motion.
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Osterman KS, Kerner TE, Williams DB, Hartov A, Poplack SP, Paulsen KD. Multifrequency electrical impedance imaging: preliminary in vivo experience in breast. Physiol Meas 2000; 21:99-109. [PMID: 10720005 DOI: 10.1088/0967-3334/21/1/313] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
We have deployed a recently completed spectroscopic electrical impedance tomography (EITS) imaging system in a small series of women (13 participants accrued to date) in order to investigate the feasibility of delivering EITS breast examinations on a routine basis. Hardware is driven with sinusoidally varying spatial patterns of applied voltage delivered to 16 electrodes over the 10 kHz to 1 MHz spectral range using a radially translating interface which couples the electrodes to the breast through direct contact. Imaging examinations have consisted of the acquisition of multi-channel measurements at ten frequencies on both breasts. Participants lie prone on an examination table with the breast to be imaged pendant in the electrode array that is located below the table. Examinations were comfortable and easy to deliver (about 10 minutes per breast including electrode-positioning time). Although localized near-surface electrode artefacts are evident in the acquired images, several findings have emerged. Permittivity images have generally been more informative than their conductivity counterparts, except in the case of fluid-filled cysts. Specifically, the mammographically normal breast appears to have characteristic absolute EITS permittivity and conductivity images that emerge across subjects. Structural features in the EITS images have correlated with limited clinical information available on participants with benign and malignant abnormality, cysts and scarring from previous lumpectomy and follow-up radiation therapy. Several cases from this preliminary experience are described.
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Hartov A, Mazzarese RA, Reiss FR, Kerner TE, Osterman KS, Williams DB, Paulsen KD. A multichannel continuously selectable multifrequency electrical impedance spectroscopy measurement system. IEEE Trans Biomed Eng 2000; 47:49-58. [PMID: 10646279 DOI: 10.1109/10.817619] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
There is increasing evidence that alterations in the electrical property spectrum of tissues below 10 MHz is diagnostic for tissue pathology and/or pathophysiology. Yet, the complexity associated with constructing a high-fidelity multichannel, multifrequency data acquisition instrument has limited widespread development of spectroscopic electrical impedance imaging concepts. To contribute to the relatively sparse experience with multichannel spectroscopy systems this paper reports on the design, realization and evaluation of a prototype 32-channel instrument. The salient features of the system include a continuously selectable driving frequency up to 1 MHz, either voltage or current source modes of operation and simultaneous measurement of both voltage and current on each channel in either of these driving configurations. Comparisons of performance with recently reported fixed-frequency systems is favorable. Volts dc (VDC) signal-to-noise ratios of 75-80 dB are achieved and the noise floor for ac signals is near 100 dB below the signal strength of interest at 10 kHz and 60 dB down at 1 MHz. The added benefit of being able to record multispectral information on source and sense signal amplitudes and phases has also been realized. Phase-sensitive detection schemes and multiperiod undersampling techniques have been deployed to ensure measurement fidelity over the full bandwidth of system operation.
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Van Houten EE, Weaver JB, Miga MI, Kennedy FE, Paulsen KD. Elasticity reconstruction from experimental MR displacement data: initial experience with an overlapping subzone finite element inversion process. Med Phys 2000; 27:101-7. [PMID: 10659743 DOI: 10.1118/1.598861] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
The determination of the elastic property distribution in heterogeneous gel samples with a finite element based reconstruction scheme is considered. The algorithm operates on small overlapping subzones of the total field to allow for a high degree of spatial discretization while maintaining computational tractability. By including a Maxwellian-type viscoelastic property in the model physics and optimizing the spatial distribution of this property in the same manner as elasticity, a Young's modulus image is obtained which reasonably reflects the true distribution within the gel. However, the image lacks the clarity and accuracy expected based on simulation experience. Preliminary investigations suggest that transient effects in the data are the cause of a significant mismatch between the inversion model, which assumes steady-state conditions, and the actual displacements as measured by a phase contrast MR technique.
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Tosteson TD, Pogue BW, Demidenko E, McBride TO, Paulsen KD. Confidence maps and confidence intervals for near infrared images in breast cancer. IEEE TRANSACTIONS ON MEDICAL IMAGING 1999; 18:1188-1193. [PMID: 10695531 DOI: 10.1109/42.819328] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
This paper extends basic concepts of statistical hypothesis testing and confidence intervals to images generated by a new procedure for near infrared spectroscopic tomography being developed for use in breast cancer diagnosis. By estimating the covariance matrix of the pixels of an image from data used in the image reconstruction process, confidence maps for statistical tests on individual pixels and confidence intervals for entire images are displayed as an aid to research and clinical personnel interpreting possibly noisy images. The methods are applied to simulated and phantom-based images.
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Roberts DW, Miga MI, Hartov A, Eisner S, Lemery JM, Kennedy FE, Paulsen KD. Intraoperatively updated neuroimaging using brain modeling and sparse data. Neurosurgery 1999; 45:1199-206; discussion 1206-7. [PMID: 10549938] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/14/2023] Open
Abstract
OBJECTIVE Image-guided neurosurgery incorporating preoperatively obtained imaging information is subject to spatial error resulting from intraoperative brain displacement and deformation. A strategy to update preoperative imaging using readily available intraoperative information has been developed and implemented. METHODS Preoperative magnetic resonance imaging is used to generate a patient-specific three-dimensional finite element model of the brain by which deformation resulting from multiple surgical processes may be simulated. Sparse imaging data obtained subsequently, such as from digital cameras or ultrasound, are then used to prescribe the displacement of selected points within the model. Based on the model, interpolation to the resolution of preoperative imaging may then be performed. RESULTS The algorithms for generation of the finite element model and for its subsequent deformation were successfully validated using a pig brain model. In these experiments, the method recovered 84% of the intraoperative shift resulting from surgically induced tissue motion. Preliminary clinical application in the operating room has demonstrated feasibility. CONCLUSION A strategy by which intraoperative brain deformation may be accounted for has been developed, validated in an animal model, and demonstrated clinically.
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Van Houten EE, Paulsen KD, Miga MI, Kennedy FE, Weaver JB. An overlapping subzone technique for MR-based elastic property reconstruction. Magn Reson Med 1999; 42:779-86. [PMID: 10502768 DOI: 10.1002/(sici)1522-2594(199910)42:4<779::aid-mrm21>3.0.co;2-z] [Citation(s) in RCA: 103] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
A finite element-based nonlinear inversion scheme for magnetic resonance (MR) elastography is detailed. The algorithm operates on small overlapping subzones of the total region of interest, processed in a hierarchical order as determined by progressive error minimization. This zoned approach allows for a high degree of spatial discretization, taking advantage of the data-rich environment afforded by the MR. The inversion technique is tested in simulation under high-noise conditions (15% random noise applied to the displacement data) with both complicated user-defined stiffness distributions and realistic tissue geometries obtained by thresholding MR image slices. In both cases the process has proved successful and has been capable of discerning small inclusions near 4 mm in diameter. Magn Reson Med 42:779-786, 1999.
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Miga MI, Paulsen KD, Lemery JM, Eisner SD, Hartov A, Kennedy FE, Roberts DW. Model-updated image guidance: initial clinical experiences with gravity-induced brain deformation. IEEE TRANSACTIONS ON MEDICAL IMAGING 1999; 18:866-74. [PMID: 10628946 DOI: 10.1109/42.811265] [Citation(s) in RCA: 84] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Image-guided neurosurgery relies on accurate registration of the patient, the preoperative image series, and the surgical instruments in the same coordinate space. Recent clinical reports have documented the magnitude of gravity-induced brain deformation in the operating room and suggest these levels of tissue motion may compromise the integrity of such systems. We are investigating a model-based strategy which exploits the wealth of readily-available preoperative information in conjunction with intraoperatively acquired data to construct and drive a three dimensional (3-D) computational model which estimates volumetric displacements in order to update the neuronavigational image set. Using model calculations, the preoperative image database can be deformed to generate a more accurate representation of the surgical focus during an operation. In this paper, we present a preliminary study of four patients that experienced substantial brain deformation from gravity and correlate cortical shift measurements with model predictions. Additionally, we illustrate our image deforming algorithm and demonstrate that preoperative image resolution is maintained. Results over the four cases show that the brain shifted, on average, 5.7 mm in the direction of gravity and that model predictions could reduce this misregistration error to an average of 1.2 mm.
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48
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McBride TO, Pogue BW, Gerety ED, Poplack SB, Osterberg UL, Paulsen KD. Spectroscopic diffuse optical tomography for the quantitative assessment of hemoglobin concentration and oxygen saturation in breast tissue. APPLIED OPTICS 1999; 38:5480-90. [PMID: 18324057 DOI: 10.1364/ao.38.005480] [Citation(s) in RCA: 52] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Near-infrared (NIR) spectroscopic diffuse tomography has been used to map the hemoglobin concentration and the hemoglobin oxygen saturation quantitatively in tissuelike phantoms and to determine average values in vivo. A series of phantom calibrations were performed to achieve quantitatively accurate images of the absorption and the reduced scattering coefficients at multiple optical wavelengths. A least-squares fit was applied to absorption-coefficient images at multiple NIR wavelengths to obtain hemoglobin images of the concentration and the hemoglobin oxygen saturation. Objects of varying hemoglobin concentration and oxygen saturation within highly scattering media were localized and imaged to within 15% of their actual values. The average hemoglobin concentration and oxygen saturation of breast tissue was measured in vivo for two women volunteers. The potential application for the diagnosis of breast tumors is discussed.
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49
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Paulsen KD, Osterman KS, Hoopes PJ. In vivo electrical impedance spectroscopic monitoring of the progression of radiation-induced tissue injury. Radiat Res 1999; 152:41-50. [PMID: 10381839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/13/2023]
Abstract
This study evaluates the potential of electrical impedance spectroscopy (EIS) as a noninvasive technique for tracking the progression of radiation-induced damage in normal muscle tissue. Male Sprague-Dawley rats were irradiated locally to the gastrocnemius and biceps femoris muscle. Single doses were administered using a procedure that spares skin and bone. Complex impedance spectral measurements (taken at 50 frequency points between 1 kHz and 1 MHz) were made at monthly intervals using recessed disk electrodes applied to the skin. A histological scoring scheme was developed for evaluation of injury. A strong dose-dependent progression of injury evident in both spectral measurements and histological scoring has been observed. Latent time also appears to be dependent on dose with changes induced by 70 Gy evident by 2 months, changes induced by 90 Gy observed by 1 month, and dramatic changes found within 3 weeks at 150 Gy. Injury was morphologically comparable to the type of damage that occurs in response to small, fractionated doses, but on a much shorter time scale. Increased spectral shift was a consistent indicator of the extent of tissue injury at the time of measurement. The use of a large single dose resulted in an excellent model in terms of inducing a significant progression in tissue injury over a short post-treatment follow-up period in the muscle mass while also providing a consistent location for in vivo electrical impedance measurements. The results show that EIS can follow radiation-induced tissue change, suggesting that EIS has the potential to monitor the types of injury observed in late radiation damage of muscle tissue noninvasively.
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Meaney PM, Paulsen KD, Chang JT, Fanning MW, Hartov A. Nonactive antenna compensation for fixed-array microwave imaging: Part II--Imaging results. IEEE TRANSACTIONS ON MEDICAL IMAGING 1999; 18:508-18. [PMID: 10463129 DOI: 10.1109/42.781016] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Model-based imaging techniques utilizing microwave signal illumination rely heavily on the ability to accurately represent the wave propagation with a suitable numerical model. To date, the highest quality images from our prototype system have been achieved utilizing a single transmitter/single receiver measurement system where both antennas are manually repositioned to facilitate multiple illuminations of the imaging region, thus requiring long data acquisition times. In an effort to develop a system that can acquire data in a real time manner, a 32-channel network has been fabricated with all ports capable of being electronically selected for either transmit or receive mode. The presence of a complete array of antenna elements at data collection time perturbs the field distributions being measured, which can subsequently degrade the image reconstruction due to increased data-model mismatch. Incorporating the nonactive antenna-compensation model from Part I of this paper into our hybrid element near field image reconstruction algorithm is shown to restore image quality when fixed antenna-array data acquisition is used. Improvements are most dramatic for inclusions located in near proximity to the antenna array itself, although cases of improvement in the recovery of centered heterogeneities are also illustrated. Increases in the frequency of illumination are found to warrant an increased need for nonactive antenna compensation. Quantitative measures of recovered inclusion shape and position reveal a systematic improvement in image reconstruction quality when the nonactive antenna-compensation model is employed. Improvements in electrical property value recovery of localized heterogeneities are also observed. Image reconstructions in freshly excised breast tissue illustrate the applicability of the approach when used with our two-dimensional microwave imaging system.
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