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Asztalos S, Gann P, Hayes M, Nonn L, Wiley E, Khan S, Susnik B, Diaz L, Banerji N, Tonetti D. Increased Expression of Inflammatory Genes in Pregnancy-Associated Breast Cancers. Cancer Res 2009. [DOI: 10.1158/0008-5472.sabcs-09-5158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Introduction: Epidemiological studies have shown that women of all ages experience a transient increase in the risk of developing breast cancer following pregnancy. Furthermore, breast cancers detected soon after a completed pregnancy (pregnancy-associated breast cancers, or PABCs) have a worse prognosis than those detected at more distant intervals (Schedin 2006). We previously found evidence for increased expression of inflammatory genes in the human breast following pregnancy. (Asztalos et al. 2008). In this study we analyzed the same gene set in human breast cancer tissue, to investigate the role of inflammation in pregnancy associated breast cancers.Patients and Methods: Women ≤ 45 years of age with breast cancer were eligible for the study, and were categorized as either nulliparous, recently pregnant or distantly pregnant. Thirteen nulliparous, 14 recently pregnant (<2 years since pregnancy) and 15 distantly pregnant (5-10 years) patients were identified. Tumor regions were isolated from formalin-fixed paraffin embedded tissues using Laser Capture Microdissection, followed by RNA extraction and cDNA synthesis. Genes of interest were preamplified linearly, followed by real time PCR. We chose 59 genes involved in the processes of inflammation, ECM remodeling and angiogenesis. A small number of breast cancer prognostic genes were also included. Gene expression between groups was compared using either t-test, ANOVA or unsupervised hierarchical clustering.Results: When recent and distant PABCs were combined and compared to the nulliparous group, we observed a number of significantly differentially regulated genes, such as CXCL1, THBS1, ELN, IL11 and MMP3. Upregulation of CXCL1 in the post-pregnant samples is interesting since CXCL1 is an important inflammatory chemokine, with implications in cancer. THBS1, a natural inhibitor of neovascularization and tumorigenesis, was downregulated in the post-pregnancy group. In this early analysis, we did not observe a difference in gene expression between recent and distant pregnancies, possibly due to the limited number of samples. However, immunoglobulin A showed a trend towards upregulation in the recent pregnancy group, suggesting an enhanced state of immune activity in the cancers occurring in the recently pregnant breast. When concerted gene expression was compared by non-supervised hierarchical clustering, we found that PABCs (both recent and distant) had more frequent associations with inflammation associated gene-expression patterns than those of nulliparous patients.Conclusions: This is the first study to address the hypothesis suggesting the role of post-pregnancy events, such as inflammation, ECM remodeling and angiogenesis in the etiology and aggressiveness of PABCs by looking at a set of human breast cancers with known pregnancy history. We show that the cancers of patients detected post-pregnancy are more frequently associated with an inflammation-associated gene expression pattern, than those of nulliparous women. The exact role of inflammation in the aggressiveness of PABCs remains to be further elucidated.
Citation Information: Cancer Res 2009;69(24 Suppl):Abstract nr 5158.
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Zalles C, Zalles N, Mahooti S, Zahid F, Khan S, Rimm D. Objective Spectral-Spatial Analysis of Random Periareolar Fine Needle Aspiration of Women at High Risk for Contralateral Breast Cancer. Cancer Res 2009. [DOI: 10.1158/0008-5472.sabcs-09-6001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background: Random periareolar fine needle aspiration (RPFNA) cytology coupled with the Gail risk model has been used to predict the short-term risk of breast cancer in high risk women. The cytomorphologic features of atypical epithelial cells obtained by RPFNA can be subtle and result in inter-observer diagnostic variability and decreased sensitivity. Spectral-spatial analysis (SSA) is a method for objective image analysis that uses both color and spatial information to classify features into user-defined groups. We use SSA to classify cell clusters from RPFNA specimens into objective categories and compare that result to the cytopathology interpretation, which is the current standard.Design:Cell clusters on Papanicolau stained cytology Thin Prep slides from 7 benign and 7 malignant (14 total) breast RPFNA specimen were used to generate image stacks with the CRI Nuance platform. The specimens were processed and stained in three separate cytopathology laboratories. To build the algorithmic model, image stacks were analyzed using a neural network-based artificial intelligence system now distributed commercially as the Inform system. We manually painted green and red indicating feature (malignant) versus non-feature/background (benign) cells, respectively. A diagnostic algorithmic solution was created to stratify the new images as percent pixels correctly assigned as “malignant”. The solution was tested against cell clusters from 53 high-risk RPFNA specimen stratified by an expert pathologist (CZ) into the 5 categories of benign, epithelial hyperplasia, borderline, atypical and malignant. The specimens were collected from the contra lateral breast of patients with mastectomies for invasive carcinoma. Although 14 of the 67 cases were reused, no cellular clusters used in the training set were included in the validation set. The cytopathologist diagnosis was used as the gold standard and binarized to designate malignant cases as 1 and benign 0. These were compared to the green pixel (malignant) percentage in each case processed by INform.Results: The SSA algorithm classified all 7 malignant cases concordantly with the pathologist. The remaining 60 cases were classified as benign. The ROC curve generated from the cases had an AUC of 0.974 and an accuracy of 79.1%. The sensitivity was 100% and the specificity 76.7%.Conclusions: Spectral-spatial analysis can objectively classify benign and malignant cell clusters in excellent concordance to an expert pathologist. The epithelial hyperplasia, borderline, and atypical categories were all classified as benign by this solution representing a weakness in the solution. However, since these classes are not definitive with respect to biological behavior, the algorithm was binarized as above. In the future, algorithms will be based on biologically proven classes toward the goal of more definitive classification. A mature version of this technology could allow much broader usage of RPFNA since it would no longer be solely dependent on expert cytopathology interpretation.
Citation Information: Cancer Res 2009;69(24 Suppl):Abstract nr 6001.
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653
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Khan S, Zadeh R, Macfie J. Letter 4: randomized clinical trial comparing laparoscopic and open surgery in patients with rectal cancer (Br J Surg 2009; 96: 982-989). Br J Surg 2009; 96:1494-5; author reply 1496. [PMID: 19918843 DOI: 10.1002/bjs.6926] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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654
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Khan S, Kubu C. P1.059 Psychiatric manifestations in dystonia. Parkinsonism Relat Disord 2009. [DOI: 10.1016/s1353-8020(09)70181-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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655
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Khan S, Gatt M, MacFie J. Enhanced recovery programmes and colorectal surgery: does the laparoscope confer additional advantages? Colorectal Dis 2009; 11:902-8. [PMID: 19183327 DOI: 10.1111/j.1463-1318.2009.01781.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
BACKGROUND Enhanced recovery after surgery (ERAS) protocols aim to reduce postoperative lengths of stay (LOS). Laparoscopic surgery shares the same objective. Whether or not laparoscopic surgery conveys additional benefits over and above those achievable with ERAS alone is unclear. METHOD A review of the literature from January 1966 to June 2008 was performed. Randomized trial and case series investigating the role of laparoscopic surgery within ERAS protocols were included. These were assessed for LOS, readmissions, return of gut function, quality of life and cost of treatment. RESULTS Four publications from three randomized trials and another seven case series were identified. Two randomized trials revealed no difference in the LOS and readmission rates between ERAS when used alone and ERAS with the inclusion of laparoscopic surgery. However, a third trial revealed a significantly shorter LOS and a lower readmission rate in the ERAS and laparoscopic group. CONCLUSION The limited evidence presently available suggests that no further benefit is obtained by the inclusion of laparoscopic surgery in ERAS protocols. Further research is needed to derive more definitive conclusions.
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Khan S, Myers K. Warfarin can be safe and effective in the extreme elderly. Age Ageing 2009; 38:763; author reply 763-4. [PMID: 19749202 DOI: 10.1093/ageing/afp162] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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657
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Khan S, Canales B. POD-08.01: Randall's Plaque and Papillary Injury. Urology 2009. [DOI: 10.1016/j.urology.2009.07.1129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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658
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Khan S, Del-Duca C, Fenton E, Holding S, Hirst J, Doré PC, Sewell WAC. Limited value of testing for intrinsic factor antibodies with negative gastric parietal cell antibodies in pernicious anaemia. J Clin Pathol 2009; 62:439-41. [PMID: 19398595 DOI: 10.1136/jcp.2008.060509] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
BACKGROUND The appropriate testing strategy for diagnosing pernicious anaemia using gastric parietal cell (GPC) and/or intrinsic factor antibodies (IFA) is controversial. Intrinsic factor antibodies are found in only about 70% of cases. Indirect immunofluorescence screening for gastric parietal cell antibodies is more sensitive, labour intensive, and less specific. METHODS The frequency of antibody positivity (IFA and/or GPC) was retrospectively examined in patients tested for both autoantibodies over a three-year period. It was investigated whether B12 levels were related to antibody status. These findings were validated in a prospective study of IFA in 91 GPC negative patients with low B12 levels. RESULTS Of 847 samples identified in the retrospective study, 4 (0.47%) were positive for only intrinsic factor antibodies, 731 (86.3%) positive for GPC alone, and 112 (13.2%) for both. Student t test on log-transformed data showed B12 levels had no bearing on autoantibody status. 91 consecutive patients with low B12 levels were tested for both autoantibodies; all were negative for gastric parietal cell antibodies. Only one sample was positive for intrinsic factor antibody using the porcine intrinsic factor assay, but was negative by a human recombinant intrinsic factor-based ELISA. CONCLUSIONS This study provides evidence that testing for gastric parietal cell antibodies is an appropriate screening test for pernicious anaemia, with intrinsic factor antibodies reserved for confirmatory testing or in patients with other autoantibodies that mask the GPC pattern; B12 levels are not related to autoantibody status.
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659
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660
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Lefèvre J, Leroy F, Khan S, Dubois J, Huppi P, Baillet S, Mangin J. Helmholtz Hodge decomposition and the identification of growth seeds in the neonate brain. Neuroimage 2009. [DOI: 10.1016/s1053-8119(09)71560-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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661
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Welsh SJ, Khan S. Radiological localizing techniques in adrenal tumors. MINERVA ENDOCRINOL 2009; 34:161-169. [PMID: 19471240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The characterisation of adrenal lesions is a common radiological dilemma. Incidental adrenal lesions are commonly detected with computed tomography (CT), and lesion characterisation is critical. The prevalence of incidental adrenal lesions has been reported to be 2.3% at autopsy and 0.5-2% with abdominal CT. Such lesions are likely to be seen with increasing frequency given the expanding use of radiological imaging in clinical practice. Although the majority of adrenal lesions are benign, in patients with an extra-adrenal primary cancer the probability of an adrenal mass being a metastasis is 52%. Unfortunately, there may be significant overlap between the imaging appearances of benign lesions such as lipid-poor adenomas and malignant lesions, particularly metastases and small adrenal carcinomas. This review highlights recent advances in radiological imaging of adrenal lesions and we discuss the relative merits of CT and magnetic resonance imaging to aid the identification of benign and malignant adrenal lesions and their roles, in combination with biochemical and clinical data, in recognizing common pathologies such as adrenal adenoma, phaeochromocytoma, carcinoma and metastases. We also discuss the radiological characteristics of rarer adrenal lesions including lymphoma, neuroblastic tumours (neuroblastoma, ganglioneuroblastoma, and ganglioneuroma), lipomatous tumours (myelolipoma, angiolipoma, teratoma, lipoma and liposarcoma), in addition to hemangioma, hemangiosarcoma and leiomyosarcoma.
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Golzio PG, Vinci M, Amellone C, Jorfida M, Anselmino M, Tizzani E, Trevi GP, Bongiorni MG, Hamid S, Arujna A, Ginks M, Mcphail M, Khan S, Ladwiniec A, Bucknall C, Rinaldi A, Bordachar P, Mokrani B, Deplagne A, Ploux S, Ritter P, Jais P, Haissaguerre M, Clementy J, Hamid S, Arujna A, Ginks M, Mcphail M, Khan S, Ladwiniec A, Bucknall C, Rinaldi C, Solarino G, Zucchelli G, Soldati E, Di Cori A, Bandera F, De Lucia R, Segreti L, Bongiorni MG, Novak M, Dvorak P, Lipoldova J, Slana B, Kamaryt P. Abstracts: Lead extraction. Europace 2009. [DOI: 10.1093/europace/euq249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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663
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Blair JE, Khan S, Konstam MA, Swedberg K, Zannad F, Burnett JC, Grinfeld L, Maggioni AP, Udelson JE, Zimmer CA, Ouyang J, Chen CF, Gheorghiade M. Weight changes after hospitalization for worsening heart failure and subsequent re-hospitalization and mortality in the EVEREST trial. Eur Heart J 2009; 30:1666-73. [DOI: 10.1093/eurheartj/ehp144] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
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664
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Siddaiah-subramanya MB, Hossain MB, Chakraborty J, Khan S, Memon B, Memon MA. HP09�*META-ANALYSIS OF D1 VERSUS D2 GASTRECTOMY FOR THE TREATMENT OF GASTRIC CARCINOMA. ANZ J Surg 2009. [DOI: 10.1111/j.1445-2197.2009.04920_9.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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665
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Osland E, Khan S, Hossain MB, Memon MA. GS29P�EFFECT OF IMMUNE-ENHANCED SUPPLEMENTED FORMULAS IN PERIOPERATIVE OUTCOMES: A META-ANALYSIS. ANZ J Surg 2009. [DOI: 10.1111/j.1445-2197.2009.04917_29.x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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666
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Abbara A, Al-Hadithy H, Khan S, Shorvon P. An unusual cause of obstructive jaundice. CASE REPORTS 2009; 2009:bcr09.2008.0960. [DOI: 10.1136/bcr.09.2008.0960] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
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667
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Khan MU, Khan S, El-Refaie S, Win Z, Rubello D, Al-Nahhas A. Clinical indications for Gallium-68 positron emission tomography imaging. Eur J Surg Oncol 2009; 35:561-7. [PMID: 19201567 DOI: 10.1016/j.ejso.2009.01.007] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2008] [Revised: 01/12/2009] [Accepted: 01/14/2009] [Indexed: 01/10/2023] Open
Abstract
BACKGROUND (68)Ga-PET imaging is showing slow but steady progress when compared to (18)F-FDG PET. The advantage of in-house preparation of (68)Ga without necessity of a cyclotron, and the new generator configuration with future possibility of freeze-dried kits would make it a promising PET agent for the future. METHODS An exhaustive literature exploration was performed using the search engines High-Wire Press, Pubmed, Embase and library databases. Recent reviews on the subject and up-to-date studies on the topic were found that described the role of (68)Ga-PET imaging. Clinical experiences, including our own are described. RESULTS Recent resurgence in development of peptides labelled with radiometals, for diagnostic and therapeutic purposes, resulted in a new beginning for (68)Ga-PET imaging. Pre-clinical experience employing animal models and investigation of tracer kinetics/tumour uptake measurements using dynamic (68)Ga-PET have provided data regarding identification of Somatostatin receptors subtypes on many tumours. Present published experiences including our own support these and highlight current clinical utility of (68)Ga-PET imaging. (68)Ga-DOTATOC and (68)Ga-DOTANOC are the most prominent radiopharmaceuticals used nowadays. CONCLUSION (68)Ga-PET is employed in the management of neuroendocrine tumours and neural crest tumours (phaeochromocytoma and paraganglioma) with diagnostic and therapeutic implications where it compliments present radiologic and scintigraphic procedures. Diagnosis and radiotherapy treatment planning for meningiomas in pertinent clinical setting is another potential use of (68)Ga-PET. Limited studies have shown its utility in prostate cancer but further studies are contemplated. Therefore, current experience tends to open a new horizon for the clinical utility of (68)Ga-PET imaging in future.
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Dulan G, Yang Y, Liu Z, Khan S, Rossi I, Nwariaku F. QS352. VEGF Regulates Endothelial Migration by Reactive Oxidant Species - Mediated Inactivation of SHP-2 Phosphatase. J Surg Res 2009. [DOI: 10.1016/j.jss.2008.11.661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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669
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Khan S, Dawson S, Moor J, Sewell W, Dore P. A Patient Survey on the Use and Effectiveness of Aerosolized Epinephrine (Primatene mist inhaler) for Treatment of Anaphylaxis/angioedema. J Allergy Clin Immunol 2009. [DOI: 10.1016/j.jaci.2008.12.1136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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670
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Le Roux MR, Khan S, Valentine AJ. Nitrogen and carbon costs of soybean and lupin root systems during phosphate starvation. Symbiosis 2009. [DOI: 10.1007/bf03179989] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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671
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Holding S, Khan S, Doré P, Sewell W. Comparison of Commercial Nonammoniated and Ammoniated Latex Skin Prick Testing Solutions by SDS-PAGE. J Allergy Clin Immunol 2009. [DOI: 10.1016/j.jaci.2008.12.638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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672
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Jun Xie, Khan S, Shah M. Automatic Tracking ofEscherichia Coliin Phase-Contrast Microscopy Video. IEEE Trans Biomed Eng 2009; 56:390-9. [DOI: 10.1109/tbme.2008.2005956] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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673
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Ahmed B, Masoodi MH, Khan S. Anti-Hepatotoxic Activity of <I>Marrubium vulgare L.</I> in Carbon Tetrachloride Induced Toxicity. JOURNAL OF PHARMACEUTICAL RESEARCH 2009. [DOI: 10.18579/jpcrkc/2009/8/1/79785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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674
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Husain M, Khan S, Husain M, Saeed M, Chaudhry N. Comparison Between Prevalence and Patterns of Cigarette Smoking Amongst Sixth form Students in the United Kingdom and Pakistan. Eur Psychiatry 2009. [DOI: 10.1016/s0924-9338(09)71161-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Abstract
Background:Tobacco smoking is one of the major preventable causes of premature death and disease in the world. Adolescents are amongst the most vulnerable group of individuals in society and are highly susceptible to cigarette smoking. Sixth Formers being the most senior members of the school act as role models to younger pupils and could influence smoking behaviour.Objective:In a cross sectional and comparative study we aimed to determine the differences in smoking prevalence and patterns between Sixth Form students in Pakistan (a developing country) and the United Kingdom (a developed country).Method:A self-administered questionnaire, adapted from the WHO questionnaire, about tobacco smoking for health professionals was distributed amongst the students. The responses were anonymised to encourage truthful answers; there was no pressure to respond.Of the 235 participants in the UK, 38 (16%) were regular smokers. Of the 297 participants in Pakistan, 20 (7%) of participants were regular smokers. In both countries there was a significant difference between the genders, with males being more likely to smoke. In Pakistan it was identified that the main reason for smoking was due to peer pressure, where as in the UK it was for recreational and social purposes.Conclusions:The prevalence of smoking was higher in UK compared to Pakistan. There was a significant difference in the smoking behaviour patterns in the two countries.
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675
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Kroll J, Khan S. National initiative for quality assurance in diabetes care. Can J Diabetes 2009. [DOI: 10.1016/s1499-2671(09)33109-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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