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Hindell MA, McMahon CR, Bester MN, Boehme L, Costa D, Fedak MA, Guinet C, Herraiz‐Borreguero L, Harcourt RG, Huckstadt L, Kovacs KM, Lydersen C, McIntyre T, Muelbert M, Patterson T, Roquet F, Williams G, Charrassin J. Circumpolar habitat use in the southern elephant seal: implications for foraging success and population trajectories. Ecosphere 2016. [DOI: 10.1002/ecs2.1213] [Citation(s) in RCA: 99] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
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Volpov BL, Rosen DAS, Hoskins AJ, Lourie HJ, Dorville N, Baylis AMM, Wheatley KE, Marshall G, Abernathy K, Semmens J, Hindell MA, Arnould JPY. Dive characteristics can predict foraging success in Australian fur seals (Arctocephalus pusillus doriferus) as validated by animal-borne video. Biol Open 2016; 5:262-71. [PMID: 26873950 PMCID: PMC4810750 DOI: 10.1242/bio.016659] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Dive characteristics and dive shape are often used to infer foraging success in pinnipeds. However, these inferences have not been directly validated in the field with video, and it remains unclear if this method can be applied to benthic foraging animals. This study assessed the ability of dive characteristics from time-depth recorders (TDR) to predict attempted prey capture events (APC) that were directly observed on animal-borne video in Australian fur seals (Arctocephalus pusillus doriferus, n=11). The most parsimonious model predicting the probability of a dive with ≥1 APC on video included only descent rate as a predictor variable. The majority (94%) of the 389 total APC were successful, and the majority of the dives (68%) contained at least one successful APC. The best model predicting these successful dives included descent rate as a predictor. Comparisons of the TDR model predictions to video yielded a maximum accuracy of 77.5% in classifying dives as either APC or non-APC or 77.1% in classifying dives as successful verses unsuccessful. Foraging intensity, measured as either total APC per dive or total successful APC per dive, was best predicted by bottom duration and ascent rate. The accuracy in predicting total APC per dive varied based on the number of APC per dive with maximum accuracy occurring at 1 APC for both total (54%) and only successful APC (52%). Results from this study linking verified foraging dives to dive characteristics potentially opens the door to decades of historical TDR datasets across several otariid species.
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Foo D, Semmens JM, Arnould JP, Dorville N, Hoskins AJ, Abernathy K, Marshall GJ, Hindell MA. Testing optimal foraging theory models on benthic divers. Anim Behav 2016. [DOI: 10.1016/j.anbehav.2015.11.028] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Hoenner X, Whiting SD, Enever G, Lambert K, Hindell MA, McMahon CR. Nesting ecology of hawksbill turtles at a rookery of international significance in Australia’s Northern Territory. WILDLIFE RESEARCH 2016. [DOI: 10.1071/wr16047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Context
Following centuries of intense human exploitation, the global stocks of hawksbill turtle have decreased precipitously and the species is currently considered Critically Endangered by the IUCN. Australia supports the largest breeding aggregations worldwide; however, there are no accurate estimates of population abundance and seasonality for hawksbill turtles at important nesting grounds in eastern Arnhem Land.
Aims
This study was designed to fill in this lack of ecological information and assist with the conservation and management of hawksbill turtles. More specifically, our overarching goals were to assess nesting seasonality, habitat preferences and provide the first estimate of annual nesting population size at a Northern Territory rookery.
Methods
In 2009 and 2010 we collected beach monitoring, satellite telemetry and sand temperature data over two nesting seasons at a group of three islands located 30 km off Groote Eylandt in the Gulf of Carpentaria, northern Australia. We subsequently analysed these data to unravel hawksbill nesting behaviour and reproductive outputs, and examined the vulnerability of this rookery to climate change.
Key results
Hawksbill turtle nesting seasonality consistently started in mid-May, peaked in mid-August and ended in late November. Annual nesting abundance showed a near 3-fold increase between 2009 and 2010, with an average of 220 and 580 hawksbill females nesting on this island group respectively. Sand temperature at 50 cm reached more than 30°C at all monitored sites during most of the peak of the incubation period.
Conclusions
This remote and untouched group of islands constitutes a major hawksbill turtle rookery both nationally and globally. While anthropogenic impacts and predation are low year round, climate change threatens to skew hatchling sex ratios, eventually leading to an increase in hatchling mortality.
Implications
Additional ground-based surveys are required to refine the accuracy of population estimates presented in this study. Given the paucity of data in the region, we recommend this island group off Groote Eylandt be used as a population-monitoring index site for the eastern Arnhem Land hawksbill turtle breeding aggregation.
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Cummings CR, Lea MA, Morrice MG, Wotherspoon S, Hindell MA. New insights into the cardiorespiratory physiology of weaned southern elephant seals (Mirounga leonina). CONSERVATION PHYSIOLOGY 2015; 3:cov049. [PMID: 27293733 PMCID: PMC4778465 DOI: 10.1093/conphys/cov049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2015] [Revised: 09/29/2015] [Accepted: 10/07/2015] [Indexed: 06/06/2023]
Abstract
Southern elephant seal (Mirounga leonina) pups must strike a balance between conserving energy during their post-weaning fast and simultaneously developing diving abilities to attain nutritional independence. Little is known about environmental influences on cardiorespiratory patterns, hence energy use, throughout the 6 week fast. Continuous heart rates were recorded for free-ranging, newly weaned southern elephant seals using heart rate time-depth recorders for 5-9 days at Sub-Antarctic Macquarie Island, during October 1994 (n = 1), 1995 (n = 4) and 1996 (n = 1). Daytime observations of respiration and behaviour were made throughout. We present the first instance of synchronous heart rate traces recorded simultaneously for individual weaners. Generalized additive models revealed that a sinusoidal pattern of diurnal heart rate elevation and nocturnal depression was evident in all seals and, on at least one occasion, a conspicuous break in this pattern coincided with an extreme cold weather event. Seals in this study were capable of considerable cardiorespiratory control and regularly demonstrated bradycardia during periods of resting apnoea. Apnoeic duration ranged from 33 to 291 s (mean 134 s). Apnoeic heart rates (mean 67 ± 15 beats min(-1), range 40-114 beats min(-1)) were on average 19.7% lower than those exhibited during periods of eupnoea (mean 83 ± 15 beats min(-1), range 44-124 beats min(-1)). The early development of the cardiorespiratory response is characterized by arrhythmic heart and respiration rates. The strong temporal patterns observed are being driven by the opposing requirements of maximizing time spent fasting in order to develop diving capabilities and of maximizing departure mass. This pilot study has highlighted a potentially large effect of ambient weather conditions on newly weaned southern elephant seal cardiorespiratory activity. Given the increasing westerlies and more erratic and increasing storminess associated with the Southern Annular Mode predicted in the Southern Ocean, the patterns observed here warrant further investigation.
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Pistorius PA, Hindell MA, Tremblay Y, Rishworth GM. Weathering a Dynamic Seascape: Influences of Wind and Rain on a Seabird's Year-Round Activity Budgets. PLoS One 2015; 10:e0142623. [PMID: 26581108 PMCID: PMC4651498 DOI: 10.1371/journal.pone.0142623] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2015] [Accepted: 10/23/2015] [Indexed: 11/30/2022] Open
Abstract
How animals respond to varying environmental conditions is fundamental to ecology and is a question that has gained impetus due to mounting evidence indicating negative effects of global change on biodiversity. Behavioural plasticity is one mechanism that enables individuals and species to deal with environmental changes, yet for many taxa information on behavioural parameters and their capacity to change are lacking or restricted to certain periods within the annual cycle. This is particularly true for seabirds where year-round behavioural information is intrinsically challenging to acquire due to their reliance on the marine environment where they are difficult to study. Using data from over 13,000 foraging trips throughout the annual cycle, acquired using new-generation automated VHF technology, we described sex-specific, year-round activity budgets in Cape gannets. Using these data we investigated the role of weather (wind and rain) on foraging activity and time allocated to nest attendance. Foraging activity was clearly influenced by wind speed, wind direction and rainfall during and outside the breeding season. Generally, strong wind conditions throughout the year resulted in relatively short foraging trips. Birds spent longer periods foraging when rainfall was moderate. Nest attendance, which was sex-specific outside of the breeding season, was also influenced by meteorological conditions. Large amounts of rainfall (> 2.5 mm per hour) and strong winds (> 13 m s-1) resulted in gannets spending shorter amounts of time at their nests. We discuss these findings in terms of life history strategies and implications for the use of seabirds as bio-indicators.
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Campbell HA, Beyer HL, Dennis TE, Dwyer RG, Forester JD, Fukuda Y, Lynch C, Hindell MA, Menke N, Morales JM, Richardson C, Rodgers E, Taylor G, Watts ME, Westcott DA. Finding our way: On the sharing and reuse of animal telemetry data in Australasia. THE SCIENCE OF THE TOTAL ENVIRONMENT 2015; 534:79-84. [PMID: 25669144 DOI: 10.1016/j.scitotenv.2015.01.089] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2014] [Revised: 01/14/2015] [Accepted: 01/25/2015] [Indexed: 06/04/2023]
Abstract
The presence and movements of organisms both reflect and influence the distribution of ecological resources in space and time. The monitoring of animal movement by telemetry devices is being increasingly used to inform management of marine, freshwater and terrestrial ecosystems. Here, we brought together academics, and environmental managers to determine the extent of animal movement research in the Australasian region, and assess the opportunities and challenges in the sharing and reuse of these data. This working group was formed under the Australian Centre for Ecological Analysis and Synthesis (ACEAS), whose overall aim was to facilitate trans-organisational and transdisciplinary synthesis. We discovered that between 2000 and 2012 at least 501 peer-reviewed scientific papers were published that report animal location data collected by telemetry devices from within the Australasian region. Collectively, this involved the capture and electronic tagging of 12 656 animals. The majority of studies were undertaken to address specific management questions; rarely were these data used beyond their original intent. We estimate that approximately half (~500) of all animal telemetry projects undertaken remained unpublished, a similar proportion were not discoverable via online resources, and less than 8.8% of all animals tagged and tracked had their data stored in a discoverable and accessible manner. Animal telemetry data contain a wealth of information about how animals and species interact with each other and the landscapes they inhabit. These data are expensive and difficult to collect and can reduce survivorship of the tagged individuals, which implies an ethical obligation to make the data available to the scientific community. This is the first study to quantify the gap between telemetry devices placed on animals and findings/data published, and presents methods for improvement. Instigation of these strategies will enhance the cost-effectiveness of the research and maximise its impact on the management of natural resources.
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Kernaléguen L, Dorville N, Ierodiaconou D, Hoskins AJ, Baylis AMM, Hindell MA, Semmens J, Abernathy K, Marshall GJ, Cherel Y, Arnould JPY. From video recordings to whisker stable isotopes: a critical evaluation of timescale in assessing individual foraging specialisation in Australian fur seals. Oecologia 2015; 180:657-70. [DOI: 10.1007/s00442-015-3407-2] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2015] [Accepted: 07/16/2015] [Indexed: 11/29/2022]
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Arnould JPY, Monk J, Ierodiaconou D, Hindell MA, Semmens J, Hoskins AJ, Costa DP, Abernathy K, Marshall GJ. Use of Anthropogenic Sea Floor Structures by Australian Fur Seals: Potential Positive Ecological Impacts of Marine Industrial Development? PLoS One 2015; 10:e0130581. [PMID: 26132329 PMCID: PMC4488539 DOI: 10.1371/journal.pone.0130581] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2015] [Accepted: 05/21/2015] [Indexed: 11/18/2022] Open
Abstract
Human-induced changes to habitats can have deleterious effects on many species that occupy them. However, some species can adapt and even benefit from such modifications. Artificial reefs have long been used to provide habitat for invertebrate communities and promote local fish populations. With the increasing demand for energy resources within ocean systems, there has been an expansion of infrastructure in near-shore benthic environments which function as de facto artificial reefs. Little is known of their use by marine mammals. In this study, the influence of anthropogenic sea floor structures (pipelines, cable routes, wells and shipwrecks) on the foraging locations of 36 adult female Australian fur seals (Arctocephalus pusillus doriferus) was investigated. For 9 (25%) of the individuals, distance to anthropogenic sea floor structures was the most important factor in determining the location of intensive foraging activity. Whereas the influence of anthropogenic sea floor structures on foraging locations was not related to age and mass, it was positively related to flipper length/standard length (a factor which can affect manoeuvrability). A total of 26 (72%) individuals tracked with GPS were recorded spending time in the vicinity of structures (from <1% to >75% of the foraging trip duration) with pipelines and cable routes being the most frequented. No relationships were found between the amount of time spent frequenting anthropogenic structures and individual characteristics. More than a third (35%) of animals foraging near anthropogenic sea floor structures visited more than one type of structure. These results further highlight potentially beneficial ecological outcomes of marine industrial development.
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Bestley S, Jonsen ID, Hindell MA, Harcourt RG, Gales NJ. Taking animal tracking to new depths: synthesizing horizontal–vertical movement relationships for four marine predators. Ecology 2015; 96:417-27. [DOI: 10.1890/14-0469.1] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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Desprez M, Harcourt R, Hindell MA, Cubaynes S, Gimenez O, McMahon CR. Age-specific cost of first reproduction in female southern elephant seals. Biol Lett 2014; 10:20140264. [PMID: 24872464 DOI: 10.1098/rsbl.2014.0264] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
When to commence breeding is a crucial life-history decision that may be the most important determinant of an individual's lifetime reproductive output and can have major consequences on population dynamics. The age at which individuals first reproduce is an important factor influencing the intensity of potential costs (e.g. reduced survival) involved in the first breeding event. However, quantifying age-related variation in the cost of first reproduction in wild animals remains challenging because of the difficulty in reliably recording the first breeding event. Here, using a multi-event capture-recapture model that accounts for both imperfect detection and uncertainty in the breeding status on an 18-year dataset involving 6637 individuals, we estimated age and state-specific survival of female elephant seals (Mirounga leonina) in the declining Macquarie Island population. We detected a clear cost of first reproduction on survival. This cost was higher for both younger first-time breeders and older first-time breeders compared with females recruiting at age four, the overall mean age at first reproduction. Neither earlier primiparity nor delaying primiparity appear to confer any evolutionary advantage, rather the optimal strategy seems to be to start breeding at a single age, 4 years.
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O'Toole MD, Lea MA, Guinet C, Hindell MA. Estimating trans-seasonal variability in water column biomass for a highly migratory, deep diving predator. PLoS One 2014; 9:e113171. [PMID: 25427104 PMCID: PMC4245103 DOI: 10.1371/journal.pone.0113171] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2014] [Accepted: 10/20/2014] [Indexed: 11/24/2022] Open
Abstract
The deployment of animal-borne electronic tags is revolutionizing our understanding of how pelagic species respond to their environment by providing in situ oceanographic information such as temperature, salinity, and light measurements. These tags, deployed on pelagic animals, provide data that can be used to study the ecological context of their foraging behaviour and surrounding environment. Satellite-derived measures of ocean colour reveal temporal and spatial variability of surface chlorophyll-a (a useful proxy for phytoplankton distribution). However, this information can be patchy in space and time resulting in poor correspondence with marine animal behaviour. Alternatively, light data collected by animal-borne tag sensors can be used to estimate chlorophyll-a distribution. Here, we use light level and depth data to generate a phytoplankton index that matches daily seal movements. Time-depth-light recorders (TDLRs) were deployed on 89 southern elephant seals (Mirounga leonina) over a period of 6 years (1999–2005). TDLR data were used to calculate integrated light attenuation of the top 250 m of the water column (LA250), which provided an index of phytoplankton density at the daily scale that was concurrent with the movement and behaviour of seals throughout their entire foraging trip. These index values were consistent with typical seasonal chl-a patterns as measured from 8-daySea-viewing Wide Field-of-view Sensor (SeaWiFs) images. The availability of data recorded by the TDLRs was far greater than concurrent remotely sensed chl-a at higher latitudes and during winter months. Improving the spatial and temporal availability of phytoplankton information concurrent with animal behaviour has ecological implications for understanding the movement of deep diving predators in relation to lower trophic levels in the Southern Ocean. Light attenuation profiles recorded by animal-borne electronic tags can be used more broadly and routinely to estimate lower trophic distribution at sea in relation to deep diving predator foraging behaviour.
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Constable AJ, Melbourne-Thomas J, Corney SP, Arrigo KR, Barbraud C, Barnes DKA, Bindoff NL, Boyd PW, Brandt A, Costa DP, Davidson AT, Ducklow HW, Emmerson L, Fukuchi M, Gutt J, Hindell MA, Hofmann EE, Hosie GW, Iida T, Jacob S, Johnston NM, Kawaguchi S, Kokubun N, Koubbi P, Lea MA, Makhado A, Massom RA, Meiners K, Meredith MP, Murphy EJ, Nicol S, Reid K, Richerson K, Riddle MJ, Rintoul SR, Smith WO, Southwell C, Stark JS, Sumner M, Swadling KM, Takahashi KT, Trathan PN, Welsford DC, Weimerskirch H, Westwood KJ, Wienecke BC, Wolf-Gladrow D, Wright SW, Xavier JC, Ziegler P. Climate change and Southern Ocean ecosystems I: how changes in physical habitats directly affect marine biota. GLOBAL CHANGE BIOLOGY 2014; 20:3004-25. [PMID: 24802817 DOI: 10.1111/gcb.12623] [Citation(s) in RCA: 162] [Impact Index Per Article: 16.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2013] [Accepted: 03/05/2014] [Indexed: 05/06/2023]
Abstract
Antarctic and Southern Ocean (ASO) marine ecosystems have been changing for at least the last 30 years, including in response to increasing ocean temperatures and changes in the extent and seasonality of sea ice; the magnitude and direction of these changes differ between regions around Antarctica that could see populations of the same species changing differently in different regions. This article reviews current and expected changes in ASO physical habitats in response to climate change. It then reviews how these changes may impact the autecology of marine biota of this polar region: microbes, zooplankton, salps, Antarctic krill, fish, cephalopods, marine mammals, seabirds, and benthos. The general prognosis for ASO marine habitats is for an overall warming and freshening, strengthening of westerly winds, with a potential pole-ward movement of those winds and the frontal systems, and an increase in ocean eddy activity. Many habitat parameters will have regionally specific changes, particularly relating to sea ice characteristics and seasonal dynamics. Lower trophic levels are expected to move south as the ocean conditions in which they are currently found move pole-ward. For Antarctic krill and finfish, the latitudinal breadth of their range will depend on their tolerance of warming oceans and changes to productivity. Ocean acidification is a concern not only for calcifying organisms but also for crustaceans such as Antarctic krill; it is also likely to be the most important change in benthic habitats over the coming century. For marine mammals and birds, the expected changes primarily relate to their flexibility in moving to alternative locations for food and the energetic cost of longer or more complex foraging trips for those that are bound to breeding colonies. Few species are sufficiently well studied to make comprehensive species-specific vulnerability assessments possible. Priorities for future work are discussed.
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McMahon CR, Howe H, van den Hoff J, Alderman R, Brolsma H, Hindell MA. Satellites, the all-seeing eyes in the sky: counting elephant seals from space. PLoS One 2014; 9:e92613. [PMID: 24651378 PMCID: PMC3961415 DOI: 10.1371/journal.pone.0092613] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2014] [Accepted: 02/24/2014] [Indexed: 11/18/2022] Open
Abstract
Regular censuses are fundamental for the management of animal populations but, are logistically challenging for species living in remote regions. The advent of readily accessible, high resolution satellite images of earth mean that it is possible to resolve relatively small (0.6 m) objects, sufficient to discern large animals. To illustrate how these advances can be used to count animals in remote regions, individual elephant seals (Mirounga leonina) were counted using satellite imagery. We used an image taken on 10/10/2011 to count elephant seals (n = 1790 ± 306 (95%CL)) on the isthmus of Macquarie Island, an estimate which overlapped with concurrent ground counts (n = 1991). The number of individuals per harem estimated using the two approaches were highly correlated, with a slope close to one and the estimated intercept also encompassing zero. This proof of concept opens the way for satellites to be used as a standard censusing technique for inaccessible and cryptically coloured species. Quantifying the population trends of higher order predators provides an especially informative and tractable indicator of ecosystem health.
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van den Hoff J, McMahon CR, Simpkins GR, Hindell MA, Alderman R, Burton HR. Bottom-up regulation of a pole-ward migratory predator population. Proc Biol Sci 2014; 281:20132842. [PMID: 24619437 DOI: 10.1098/rspb.2013.2842] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
As the effects of regional climate change are most pronounced at polar latitudes, we might expect polar-ward migratory populations to respond as habitat suitability changes. The southern elephant seal (Mirounga leonina L.) is a pole-ward migratory species whose populations have mostly stabilized or increased in the past decade, the one exception being the Macquarie Island population which has decreased continuously over the past 50 years. To explore probable causes of this anomalous trend, we counted breeding female seals annually between 1988 and 2011 in order to relate annual rates of population change (r) to foraging habitat changes that have known connections with atmospheric variability. We found r (i) varied annually from -0.016 to 0.021 over the study period, (ii) was most effected by anomalous atmospheric variability after a 3 year time lag was introduced (R = 0.51) and (iii) was associated with sea-ice duration (SID) within the seals' foraging range at the same temporal lag. Negative r years may be extrapolated to explain, at least partially, the overall trend in seal abundance at Macquarie Island; specifically, increasing SID within the seals foraging range has a negative influence on their abundance at the island. Evidence is accruing that suggests southern elephant seal populations may respond positively to a reduced sea-ice field.
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Walters A, Lea MA, van den Hoff J, Field IC, Virtue P, Sokolov S, Pinkerton MH, Hindell MA. Spatially explicit estimates of prey consumption reveal a new krill predator in the Southern Ocean. PLoS One 2014; 9:e86452. [PMID: 24516515 PMCID: PMC3905967 DOI: 10.1371/journal.pone.0086452] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2012] [Accepted: 12/15/2013] [Indexed: 02/05/2023] Open
Abstract
Development in foraging behaviour and dietary intake of many vertebrates are age-structured.
Differences in feeding ecology may correlate with ontogenetic shifts in dispersal patterns, and
therefore affect foraging habitat and resource utilization. Such life-history traits have important
implications in interpreting tropho-dynamic linkages. Stable isotope ratios in the whiskers of
sub-yearling southern elephant seals (Mirounga leonina;
n = 12) were used, in conjunction with satellite telemetry and environmental
data, to examine their foraging habitat and diet during their first foraging migration. The trophic
position of seals from Macquarie Island (54°30′S, 158°57′E) was estimated using
stable carbon (δ13C) and nitrogen (δ15N) ratios along the
length of the whisker, which provided a temporal record of prey intake. Satellite-relayed data
loggers provided details on seal movement patterns, which were related to isotopic concentrations
along the whisker. Animals fed in waters south of the Polar Front (>60°S) or within
Commission for the Conservation of Antarctic Marine Living Resources (CCAMLR) Statistical Subareas
88.1 and 88.2, as indicated by both their depleted δ13C
(<−20‰) values, and tracking data. They predominantly exploited varying proportions
of mesopelagic fish and squid, and crustaceans, such as euphausiids, which have not been reported as
a prey item for this species. Comparison of isotopic data between sub-yearlings, and 1, 2 and 3 yr
olds indicated that sub-yearlings, limited by their size, dive capabilities and prey capture skills
to feeding higher in the water column, fed at a lower trophic level than older seals. This is
consistent with the consumption of euphausiids and most probably, Antarctic krill (Euphausia
superba), which constitute an abundant, easily accessible source of prey in water masses
used by this age class of seals. Isotopic assessment and concurrent tracking of seals are
successfully used here to identify ontogenetic shifts in broad-scale foraging habitat use and diet
preferences in a highly migratory predator.
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Desprez M, McMahon CR, Hindell MA, Harcourt R, Gimenez O. Known unknowns in an imperfect world: incorporating uncertainty in recruitment estimates using multi-event capture-recapture models. Ecol Evol 2013; 3:4658-68. [PMID: 24363895 PMCID: PMC3867902 DOI: 10.1002/ece3.846] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2013] [Revised: 09/17/2013] [Accepted: 09/19/2013] [Indexed: 11/11/2022] Open
Abstract
Studying the demography of wild animals remains challenging as several of the critical parts of their life history may be difficult to observe in the field. In particular, determining with certainty when an individual breeds for the first time is not always obvious. This can be problematic because uncertainty about the transition from a prebreeder to a breeder state - recruitment - leads to uncertainty in vital rate estimates and in turn in population projection models. To avoid this issue, the common practice is to discard imperfect data from the analyses. However, this practice can generate a bias in vital rate estimates if uncertainty is related to a specific component of the population and reduces the sample size of the dataset and consequently the statistical power to detect effects of biological interest. Here, we compared the demographic parameters assessed from a standard multistate capture-recapture approach to the estimates obtained from the newly developed multi-event framework that specifically accounts for uncertainty in state assessment. Using a comprehensive longitudinal dataset on southern elephant seals, we demonstrated that the multi-event model enabled us to use all the data collected (6639 capture-recapture histories vs. 4179 with the multistate model) by accounting for uncertainty in breeding states, thereby increasing the precision and accuracy of the demographic parameter estimates. The multi-event model allowed us to incorporate imperfect data into demographic analyses. The gain in precision obtained has important implications in the conservation and management of species because limiting uncertainty around vital rates will permit predicting population viability with greater accuracy.
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Schick RS, New LF, Thomas L, Costa DP, Hindell MA, McMahon CR, Robinson PW, Simmons SE, Thums M, Harwood J, Clark JS. Estimating resource acquisition and at-sea body condition of a marine predator. J Anim Ecol 2013; 82:1300-15. [PMID: 23869551 PMCID: PMC4028992 DOI: 10.1111/1365-2656.12102] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2012] [Accepted: 05/13/2013] [Indexed: 02/03/2023]
Abstract
1. Body condition plays a fundamental role in many ecological and evolutionary processes at a variety of scales and across a broad range of animal taxa. An understanding of how body condition changes at fine spatial and temporal scales as a result of interaction with the environment provides necessary information about how animals acquire resources. 2. However, comparatively little is known about intra- and interindividual variation of condition in marine systems. Where condition has been studied, changes typically are recorded at relatively coarse time-scales. By quantifying how fine-scale interaction with the environment influences condition, we can broaden our understanding of how animals acquire resources and allocate them to body stores. 3. Here we used a hierarchical Bayesian state-space model to estimate the body condition as measured by the size of an animal's lipid store in two closely related species of marine predator that occupy different hemispheres: northern elephant seals (Mirounga angustirostris) and southern elephant seals (Mirounga leonina). The observation model linked drift dives to lipid stores. The process model quantified daily changes in lipid stores as a function of the physiological condition of the seal (lipid:lean tissue ratio, departure lipid and departure mass), its foraging location, two measures of behaviour and environmental covariates. 4. We found that physiological condition significantly impacted lipid gain at two time-scales - daily and at departure from the colony - that foraging location was significantly associated with lipid gain in both species of elephant seals and that long-term behavioural phase was associated with positive lipid gain in northern and southern elephant seals. In northern elephant seals, the occurrence of short-term behavioural states assumed to represent foraging were correlated with lipid gain. Lipid gain was a function of covariates in both species. Southern elephant seals performed fewer drift dives than northern elephant seals and gained lipids at a lower rate. 5. We have demonstrated a new way to obtain time series of body condition estimates for a marine predator at fine spatial and temporal scales. This modelling approach accounts for uncertainty at many levels and has the potential to integrate physiological and movement ecology of top predators. The observation model we used was specific to elephant seals, but the process model can readily be applied to other species, providing an opportunity to understand how animals respond to their environment at a fine spatial scale.
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69
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Dunshea G, Barros NB, Berens McCabe EJ, Gales NJ, Hindell MA, Jarman SN, Wells RS. Stranded dolphin stomach contents represent the free-ranging population's diet. Biol Lett 2013; 9:20121036. [PMID: 23637389 PMCID: PMC3645016 DOI: 10.1098/rsbl.2012.1036] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Diet is a fundamental aspect of animal ecology. Cetacean prey species are generally identified by examining stomach contents of stranded individuals. Critical uncertainty in these studies is whether samples from stranded animals are representative of the diet of free-ranging animals. Over two summers, we collected faecal and gastric samples from healthy free-ranging individuals of an extensively studied bottlenose dolphin population. These samples were analysed by molecular prey detection and these data compared with stomach contents data derived from stranded dolphins from the same population collected over 22 years. There was a remarkable consistency in the prey species composition and relative amounts between the two datasets. The conclusions of past stomach contents studies regarding dolphin habitat associations, prey selection and proposed foraging mechanisms are supported by molecular data from live animals and the combined dataset. This is the first explicit test of the validity of stomach contents analysis for accurate population-scale diet determination of an inshore cetacean.
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70
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Bestley S, Jonsen ID, Hindell MA, Guinet C, Charrassin JB. Integrative modelling of animal movement: incorporating in situ habitat and behavioural information for a migratory marine predator. Proc Biol Sci 2012; 280:20122262. [PMID: 23135676 DOI: 10.1098/rspb.2012.2262] [Citation(s) in RCA: 87] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
A fundamental goal in animal ecology is to quantify how environmental (and other) factors influence individual movement, as this is key to understanding responsiveness of populations to future change. However, quantitative interpretation of individual-based telemetry data is hampered by the complexity of, and error within, these multi-dimensional data. Here, we present an integrative hierarchical Bayesian state-space modelling approach where, for the first time, the mechanistic process model for the movement state of animals directly incorporates both environmental and other behavioural information, and observation and process model parameters are estimated within a single model. When applied to a migratory marine predator, the southern elephant seal (Mirounga leonina), we find the switch from directed to resident movement state was associated with colder water temperatures, relatively short dive bottom time and rapid descent rates. The approach presented here can have widespread utility for quantifying movement-behaviour (diving or other)-environment relationships across species and systems.
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71
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Hindell MA, Bradshaw CJA, Brook BW, Fordham DA, Kerry K, Hull C, McMahon CR. Long-term breeding phenology shift in royal penguins. Ecol Evol 2012; 2:1563-71. [PMID: 22957162 PMCID: PMC3434921 DOI: 10.1002/ece3.281] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2012] [Revised: 04/19/2012] [Accepted: 04/23/2012] [Indexed: 02/03/2023] Open
Abstract
The Earth's climate is undergoing rapid warming, unprecedented in recent times, which is driving shifts in the distribution and phenology of many plants and animals. Quantifying changes in breeding phenology is important for understanding how populations respond to these changes. While data on shifts in phenology are common for Northern Hemisphere species (especially birds), there is a dearth of evidence from the Southern Hemisphere, and even fewer data available from the marine environment. Surface air temperatures at Macquarie Island have increased by 0.62°C during the 30-year study period (0.21°C decade−1) and royal penguins (Eudyptes schlegeli) commenced egg laying on average three days earlier in the 1990s than during the 1960s. This contrasts with other studies of Southern Ocean seabirds; five of nine species are now breeding on average 2.1 days later than during the 1950s. Despite the different direction of these trends, they can be explained by a single underlying mechanism: resource availability. There was a negative relationship between the Southern Annular Mode (SAM) and median laying date of royal penguins, such that low-productivity (low SAM) years delayed laying date. This accords with the observations of other seabird species from the Antarctic, where later laying dates were associated with lower sea ice and lower spring productivity. The unifying factor underpinning phenological trends in eastern Antarctica is therefore resource availability; as food becomes scarcer, birds breed later. These changes are not uniform across the region, however, with resource increases in the subantarctic and decreases in eastern Antarctica.
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72
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Thums M, Bradshaw CJA, Sumner MD, Horsburgh JM, Hindell MA. Depletion of deep marine food patches forces divers to give up early. J Anim Ecol 2012; 82:72-83. [PMID: 22881702 DOI: 10.1111/j.1365-2656.2012.02021.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2011] [Accepted: 06/28/2012] [Indexed: 02/05/2023]
Abstract
Many optimal foraging models for diving animals examine strategies that maximize time spent in the foraging zone, assuming that prey acquisition increases linearly with search time. Other models have considered the effect of patch quality and predict a net energetic benefit if dives where no prey is encountered early in the dive are abandoned. For deep divers, however, the energetic benefit of giving up is reduced owing to the elevated energy costs associated with descending to physiologically hostile depths, so patch residence time should be invariant. Others consider an asymptotic gain function where the decision to leave a patch is driven by patch-depletion effects - the marginal value theorem. As predator behaviour is increasingly being used as an index of marine resource density and distribution, it is important to understand the nature of this gain function. We investigated the dive behaviour of the world's deepest-diving seal, the southern elephant seal Mirounga leonina, in response to patch quality. Testing these models has largely been limited to controlled experiments on captive animals. By integrating in situ measurements of the seal's relative lipid content obtained from drift rate data (a measure of foraging success) with area-restricted search behaviour identified from first-passage time analysis, we identified regions of high- and low-quality patches. Dive durations and bottom times were not invariant and did not increase in regions of high quality; rather, both were longer when patches were of relatively low quality. This is consistent with the predictions of the marginal value theorem and provides support for a nonlinear relationship between search time and prey acquisition. We also found higher descent and ascent rates in high-quality patches suggesting that seals minimized travel time to the foraging patch when quality was high; however, this was not achieved by increasing speed or dive angle. Relative body lipid content was an important predictor of dive behaviour. Seals did not schedule their diving to maximize time spent in the foraging zone in higher-quality patches, challenging the widely held view that maximizing time in the foraging zone translates to greater foraging success.
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Hoenner X, Whiting SD, Hindell MA, McMahon CR. Enhancing the use of Argos satellite data for home range and long distance migration studies of marine animals. PLoS One 2012; 7:e40713. [PMID: 22808241 PMCID: PMC3395646 DOI: 10.1371/journal.pone.0040713] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2012] [Accepted: 06/12/2012] [Indexed: 11/24/2022] Open
Abstract
Accurately quantifying animals’ spatial utilisation is critical for conservation, but has long remained an elusive goal due to technological impediments. The Argos telemetry system has been extensively used to remotely track marine animals, however location estimates are characterised by substantial spatial error. State-space models (SSM) constitute a robust statistical approach to refine Argos tracking data by accounting for observation errors and stochasticity in animal movement. Despite their wide use in ecology, few studies have thoroughly quantified the error associated with SSM predicted locations and no research has assessed their validity for describing animal movement behaviour. We compared home ranges and migratory pathways of seven hawksbill sea turtles (Eretmochelys imbricata) estimated from (a) highly accurate Fastloc GPS data and (b) locations computed using common Argos data analytical approaches. Argos 68th percentile error was <1 km for LC 1, 2, and 3 while markedly less accurate (>4 km) for LC ≤0. Argos error structure was highly longitudinally skewed and was, for all LC, adequately modelled by a Student’s t distribution. Both habitat use and migration routes were best recreated using SSM locations post-processed by re-adding good Argos positions (LC 1, 2 and 3) and filtering terrestrial points (mean distance to migratory tracks ± SD = 2.2±2.4 km; mean home range overlap and error ratio = 92.2% and 285.6 respectively). This parsimonious and objective statistical procedure however still markedly overestimated true home range sizes, especially for animals exhibiting restricted movements. Post-processing SSM locations nonetheless constitutes the best analytical technique for remotely sensed Argos tracking data and we therefore recommend using this approach to rework historical Argos datasets for better estimation of animal spatial utilisation for research and evidence-based conservation purposes.
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Hindell MA, Lydersen C, Hop H, Kovacs KM. Pre-partum diet of adult female bearded seals in years of contrasting ice conditions. PLoS One 2012; 7:e38307. [PMID: 22693616 PMCID: PMC3365033 DOI: 10.1371/journal.pone.0038307] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2012] [Accepted: 05/06/2012] [Indexed: 11/19/2022] Open
Abstract
Changing patterns of sea-ice distribution and extent have measurable effects on polar marine systems. Beyond the obvious impacts of key-habitat loss, it is unclear how such changes will influence ice-associated marine mammals in part because of the logistical difficulties of studying foraging behaviour or other aspects of the ecology of large, mobile animals at sea during the polar winter. This study investigated the diet of pregnant bearded seals (Erignathus barbatus) during three spring breeding periods (2005, 2006 and 2007) with markedly contrasting ice conditions in Svalbard using stable isotopes (δ13C and δ15N) measured in whiskers collected from their newborn pups. The δ15N values in the whiskers of individual seals ranged from 11.95 to 17.45 ‰, spanning almost 2 full trophic levels. Some seals were clearly dietary specialists, despite the species being characterised overall as a generalist predator. This may buffer bearded seal populations from the changes in prey distributions lower in the marine food web which seems to accompany continued changes in temperature and ice cover. Comparisons with isotopic signatures of known prey, suggested that benthic gastropods and decapods were the most common prey. Bayesian isotopic mixing models indicated that diet varied considerably among years. In the year with most fast-ice (2005), the seals had the greatest proportion of pelagic fish and lowest benthic invertebrate content, and during the year with the least ice (2006), the seals ate more benthic invertebrates and less pelagic fish. This suggests that the seals fed further offshore in years with greater ice cover, but moved in to the fjords when ice-cover was minimal, giving them access to different types of prey. Long-term trends of sea ice decline, earlier ice melt, and increased water temperatures in the Arctic are likely to have ecosystem-wide effects, including impacts on the forage bases of pagophilic seals.
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Vertigan C, McMahon CR, Andrews-Goff V, Hindell MA. The effect of investigator disturbance on egg laying, chick survival and fledging mass of short-tailed shearwaters (Puffinus tenuirostris) and little penguins (Eudyptula minor). Anim Welf 2012. [DOI: 10.7120/096272812799129493] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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