MUTATION RATES FOR ENZYME AND MORPHOLOGICAL LOCI IN BARLEY (HORDEUM VULGARE L.)

Spontaneous mutation rates were estimated by assaying 84,126 seedlings of a highly homozygous barley line (isogenic line 2025) for five enzyme loci. No mutants were observed in 841,260 allele replications. This result excludes, at probability level 0.95, a spontaneous mutation rate larger than 3.56 x 10-6/locus/gamete/generation for these enzyme loci. Isogenic line 2025 also was scored for mutants at four loci governing morphological variants. No mutants were observed in 3,386,850 allele replications which indicates that the upper bound for the mutation rate for these loci is 8.85 x 10-7. It was concluded that, even though spontaneous mutation has been important in creating variability in the barley species at the loci scored, the rate is too low to have much affect on the short-term dynamics of barley populations.

Evolution of resistance to scald, powdery mildew, and net blotch in barley composite cross II populations

Progenies of barley plants taken at random from generations F8, F13, F23, and F45 of Composite Cross II were tested for reaction to three barley pathogens, Helminthosporium teres, Erysiphe graminis, and Rhynchosporium secalis (four races). The frequency of families resistant to each of the three pathogens (excepting one race of R. secalis) increased from early to later generations. Many families carrying combinations of multiple resistance not observed among the parents were found in the later generations; one-half of the parents were susceptible to all three diseases but only 4% of the families in generation F45 were of this phenotype. The frequency of multiply resistant families also increased sharply over generations. Among the parents the greatest concentration of resistant reactions observed was triple resistance: 14% were triply resistant; none were quadruply resistant; nor were any resistant to all three pathogens. In generation F43 36% of the families were triply resistant, 32% were quadruply resistant and 6% were resistant in five of the six disease reactions. The value of later generations of Composite Cross II for breeding against pathogens thus appears to have been increased by recombination and natural selection. Significant positive correlations were found for resistance to races 40, 61, and 74 of R. secalis whereas correlations between resistance to R. secalis, E. graminis, and H. teres were generally nonsignificant. Use of these multiply resistant genotypes in breeding is thus unlikely to be hindered by negative associations between resistance to the three diseases.

Evolution of resistance to Rhynchosporium secalis (Oud.) Davis in barley composite cross II

Changes in resistance to scald disease which occurred in barley composite Cross II over 45 generations were analyzed genetically. This population, which was synthesized in 1929 by pooling equal numbers of f1 seeds from 378 pair wise crosses among 28 barley varieties, has subsequently been grown at Davis, California under standard agricultural conditions without conscious selection. Progenies derived from self-pollinated seeds from random plants taken from four generations (F8, F13, F23, and F45) were tested against four different races of scald (40, 61, 72, and 74), and rated as resistant, susceptible or segregating. Striking increases in the frequency of families resistant to races 40, 61, and 74 occurred in CC II. A test for randomness showed that quadruply susceptible and triply resistant families were more common than expected under the assumption that resistance to different races is independent. Positive correlations were found between resistance to races 40, 61, and 74, but resistance to race 72 was independent of resistance to all other races. Possible reasons for these correlations are discussed.

Estimation of outcrossing rates in Duglas-fir using isozyme markers

Seeds produced under open-pollination were collected from eight natural stands and a plus-tree seed orchard of Douglas-fir. These seeds were germinated and both diploid embryos and haploid gametophytes were analyzed by starch-gel electrophoresis. Eleven variable loci were resolved for both kinds of tissue and used as genetic markers for estimating outcrossing rates. Estimates made with single-locus and multilocus methods both indicated that the proportion of viable embryos resulting from outcrossing is about 0.90 for the natural stands, and for the seed orchard. Comparison of single-locus and multilocus estimates of outcrossing rates indicated that little or no inbreeding other than selfing occurred. Estimated outcrossing rates were higher for seeds from the upper portion of the crown than for seeds from the lower crown. It was also found that some trees selfed at a much higher rate than other trees.

Worldwide patterns of genetic variation among four esterase loci in Barley (Hordeum vulgare L.)

Electrophoretic assays of 1506 accessions of domestic (Hordeum vulgare L.) and wild (H. spontaneum Koch.) barley, maintained in the USDA World Barley Collection, led to the following conclusions: (1) worldwide the four esterase loci, Est 1, Est 2, Est 3, and Est 4, have a minimum of 7, 12, 6, and 7 alleles, respectively; (2) little or no genetic differentation has developed between H. vulgare and H. spontaneum at these four esterase loci; (3) substantial genetic polymorphism and heterozygosity occur within many of the accessions despite the heavy inbreeding which results from the mating system of predominant self fertilization and from genetic drift associated with maintenance in small populations; (4) patterns of geographical distribution of alleles at these four loci are not at random over both small and large geographical areas, including differences on a continental scale; (5) four among 16 four-locus combinations of alleles are found in excess and all other combinations occur in deficiency on a worldwide basis.

Associations between isozyme phenotypes and environment in the slender wild oat (Avena barbata) in Israel

Collections from 31 populations of A. barbata from diverse habitats in Israel were assayed electrophoretically for seven enzyme systems. Phenotype frequencies were scored in nine enzyme zones, probably representing 27 loci, to determine isozyme variability within and among populations. Many different isozyme phenotypes were found in all of the populations; also the array of isozyme phenotypes found in each population differed distinctly from that found in each other population. Overlays of phenotypic frequencies on map locations showed that isozyme variability is distributed in mosaic patterns not related to geographical distance. Principal-component and multiple-regression analyses revealed that temperature and moisture-related variables are significantly correlated with particular isozyme phenotypes. Further, the mosaic patterns of isozyme variation were found to correspond closely to mosaic patterns of the habitat. This structuring of the genetic variability into multilocus combinations was attributed to the combined effects of directional and diversifying selection. Comparisons of patterns and extent of genetic variation in Israel and California led to the conclusion that the evolution of 'ecotypes,' each adapted to a specific habitat and marked by a particular set of enzyme alleles, has proceeded further in Israel, where A. barbata is endemic, than in California, where it is a recent introduction.

ESTIMATION OF LIFE CYCLE COMPONENTS OF SELECTION IN AN EXPERIMENTAL PLANT POPULATION

Viability and fertility components of selection associated with linkage blocks marked by four electrophoretically detectable loci were estimated in an experimental population of barley [Composite Cross V (CCV)]. The intensity of selection affecting the distribution of pollen types in the outcross pool was also estimated and comparisons were made between the selective values of genes in the pools of uniting ovules and pollen. The estimates show that selection was intense at various stages of the life cycle and that viability and fertility components often opposed one another. Estimates of viability and fertility components of selection were also extended to the three-locus level. The multilocus estimates reveal large differences in viability and fertility among homozygous genotypes. It is concluded that strong selection operates at all life cycle stages in CCV, although often in differing directions.

Effect of polyploidy on phosphoglucose isomerase diversity in Festuca microstachys

Studies of the inheritance of electrophoretic banding patterns in Festuca microstachys support the hypothesis that three closely related loci, one located in each of the three ancestral genomes, code the multiple phosphoglucose isomerase (glucosephosphate isomerase; D-glucose-6-phosphate ketol-isomerase, EC 5.3.1.9) variants found in this hexaploid species. The close relationship among the three loci is indicated by the observation that hybrid enzymes of intercistronic origin form when the loci in different genomes carry alleles coding homodimers with unlike migration rates. Homozygous individuals fixed for different alleles in different genomes produce hybrid enzymes and, when self-fertilized, they breed true for isozyme patterns normally found only in the heterozygotes of diploid species. Biochemical diversity due to this "fixed heterozygosity" is high in F. microstachys; although this species is more than 99% self-fertilized the proportion of individuals with at least one heterodimer exceeded 61% in all of the 16 natural populations studied and it exceeded 92% in 11 of the populations. This great biochemical diversity may contribute to the ability of F. microstachys to survive in the wide range of habitats in which it is found over western North America.

The Effect of Level of Heterozygosity on the Performance of Hybrids between Isogenic Lines of Barley

Sixteen "isogenic" lines of Atlas 46 barley differing in one to four short chromosome segments, and 16 heterozygotes obtained by crossing these lines to male-sterile Atlas, were used to study the effect of level of heterozygosity on performance. In field tests conducted in four environments (two planting dates in two years) significant differences were found among the homozygous isogenic lines for the traits seed yield, kernel weight, tiller number, plant height, and heading time; thus each of the marked chromosome segments carries genes which, when homozygous, affect these quantitative characters. It was also found that heterozygotes produced more and heavier kernels and were taller and earlier than homozygotes but there was no clear indication that the degree of heterosis increased as the number of heterozygous segments increased from one to five. Degree of heterosis was, however, strongly affected by the environment, by allelic state at each segment (especially the segment marked by the two-row, six-row spike locus), and also by genotype for other marked segments. These results indicate that heterosis in barley has a more complex structure than can be adequately represented by simple models, such as the multiplicative model in which fitnesses are the product of fitnesses at individual loci, or threshold models in which optimum fitness is approached asymptotically as the number of heterozygous loci increases.

Coadaptation in plant populations

One of the most important questions of plant breeding is whether alleles at different loci act independently or whether the population genotype is structured so that favored combinations of alleles occur more frequently than expected under randomness. Studies employing allozyme loci as markers have demonstrated that the distribution of alleles in both natural and experimental populations of inbreeding plants is closely correlated with environment on both micro- and macrogeographic scales. Multilocus analyses have also revealed the occurrence within local populations of striking gametic phase disequilibrium (linkage disequilibrium). These observations demonstrate that selection acts to organize the population into sets of highly interacting coadapted gene complexes that promote high fitness to the local environment.

The mating system and microevolution

Studies of natural and experimental plant populations have revealed that genotypic frequency distributions are highly structured in predominantly selfing species. This high degree of genetic organization is manifested in intense correlations in allelic state over loci and also in striking micro-geographical heterogeneity. Both aspects of this structure are facilitated by self-fertilization. Development of non-random associations of alleles within populations is facilitated because inbreeding reduces heterozygosity and thus also the randomizing effect of recombination. Spatial differentiation is facilitated because self-fertilization retards gene flow from population to population. The effect of organizing the entire populational genotype into a sort of giant supergene is to increase the frequency in the population of genotypes which confers high fitness and hence to increase adaptation to the local environment. However the recombinational potential remains substantial. As a result considerable free genetic variability remains in the population and it is available for long-term response to natural selection. Thus the organization of genetic variability within populations provides for high immediate fitness and also for flexibility to meet longer term evolutionary needs. At the same time selfing is a barrier to migration and it promotes the development and maintenance of different multilocus organizations in adjacent populations occupying unlike habitats. In total, therfore, a pattern of genetic differentiation develops in space which is an almost exact overlay of the environmental heterogeneity. The plant genetic and plant breeding literature contains extensive evidence that the mating system in plants can be modified simply and drastically by selection and that different populations within the same species often practice very different amounts of inbreeding. Considering the ease with which the mating system can be altered, and the benefits of adjusting genetic variability through regulation of the mating system, it is not surprising that a high proportion of flowering plants self-fertilize to some extent and that at least one-third of species have adopted predominant selfing as a strategy in ecogenetic adaptation.

Performance and stability of mixtures of grain sorghum : I. Relationship between level of genetic diversity and performance

In the absence of intergenotypic interactions the expected yield of randomly constituted, equiproportional mixtures of genotypes is shown to be independent of the number of components. However, with positive, additive interactions, the expected yield of a mixture is expected to be a monotonically increasing function of the number of components. The observed relationship between level of genetic diversity and mean yield, seed number and seed size for mixtures of inbred lines of grain sorghum closely followed the relationships expected under the assumption of additive interaction effects. However, estimates of the first and higher order components of the total interaction effect among the sorghum lines indicated that higher order interaction effects were often as great or greater than their first order counterparts, and opposite in sign, and that they may thus have had a cancelling effect in mixtures containing three or more components. These findings are discussed in terms of the relationship between level of genetic diversity and performance, and in connection with problems associated with the development of commercial multiline varieties.

Viability versus Fecundity Selection in the Slender Wild Oat, Avena barbata L

Estimates of relative selective values of different genotypes in natural populations of predominantly self-pollinated plants have consistently shown a net heterozygote advantage. Heterozygote advantage is further analyzed in the present study by estimating components of selective values corresponding approximately to viability and fecundity. The results show that a higher proportion of heterozygotes than of homozygotes survive from seeding to adult stages and that this viability selection accounts for the overall excess of heterozygotes.

THE EFFECT OF SELECTION ON ESTERASE ALLOZYMES IN A BARLEY POPULATION

Changes in gene and genotypic frequencies at four esterase loci were monitored over 25 generations in Composite Cross V, an experimental population of barley, to obtain experimental evidence concerning the balance of forces responsible for: (1) the marked differences in allelic frequencies among barleys from different ecogeographical regions of the world; and (2) the extensive allelic variation found within local populations of barley. Analyses of the highly significant changes in allelic frequencies which occurred in CCV showed they were due to directional selection favoring particular alleles and not to mutation, migration or genetic drift. The results show that intense balancing selection, featuring consistent excesses of heterozygotes, also occurred in CCV. It is concluded that among the factors of neo-Darwinian evolution, natural selection plays the predominant role in determining the observed patterns of allelic variation in the barley species as a whole.

ANALYSIS OF COMPLEX ALLOZYME POLYMORPHISMS IN A BARLEY POPULATION

Genotypes of 68,230 individuals taken from 10 generations (F4-F6, F14-F17, F24-F26) of an experimental population of barley were determined for four esterase loci. The results show that frequencies of gametic ditypes changed significantly over generations and that striking gametic phase disequilibrium developed within a few generations for each of the six pairwise combinations of loci which were monitored. The complex behavior of these four enzyme loci in the population is attributed to interactions between selection and restriction of recombination resulting from the effects of linkage and/or inbreeding.