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Bandey HL, Martin SJ, Cernosek RW, Hillman AR. Modeling the Responses of Thickness-Shear Mode Resonators under Various Loading Conditions. Anal Chem 2012; 71:2205-14. [PMID: 21662758 DOI: 10.1021/ac981272b] [Citation(s) in RCA: 209] [Impact Index Per Article: 17.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We develop a general model that describes the electrical responses of thickness-shear mode resonators subject to a variety of surface conditions. The model incorporates a physically diverse set of single-component loadings, including rigid solids, viscoelastic media, and fluids (Newtonian or Maxwellian). The model allows any number of these components to be combined in any configuration. Such multiple loadings are representative of a variety of physical situations encountered in electrochemical and other liquid-phase applications, as well as gas-phase applications. In the general case, the response of the composite load is not a linear combination of the individual component responses. We discuss application of the model in a qualitative diagnostic fashion to gain insight into the nature of the interfacial structure, and in a quantitative fashion to extract appropriate physical parameters such as liquid viscosity and density and polymer shear moduli.
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Martin SJ, Spates JJ, Wessendorf KO, Schneider TW, Huber RJ. Resonator/Oscillator response to liquid loading. Anal Chem 2012; 69:2050-4. [PMID: 21639245 DOI: 10.1021/ac961194x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The resonant frequency of a thickness-shear mode resonator operated in contact with a fluid was measured with a network analyzer and with an oscillator circuit. The network analyzer measures changes in the device's intrinsic resonant frequency, which varies linearly with (ρη)(1/2), where ρ and η are liquid density and viscosity, respectively. The resonator/oscillator combination, however, responds differently to liquid loading than the resonator alone. By applying the operating constraints of the oscillator to an equivalent-circuit model for the liquid-loaded resonator, the response of the resonator/oscillator pair can be determined. By properly tuning the resonator/oscillator pair, the dynamic range of the response can be extended and made more linear, closely tracking the response of the resonator alone. This allows the system to measure higher viscosity and higher density liquids with greater accuracy.
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Martin SJ, Highfield AC, Brettell L, Villalobos EM, Budge GE, Powell M, Nikaido S, Schroeder DC. Global honey bee viral landscape altered by a parasitic mite. Science 2012; 336:1304-6. [PMID: 22679096 DOI: 10.1126/science.1220941] [Citation(s) in RCA: 385] [Impact Index Per Article: 32.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Emerging diseases are among the greatest threats to honey bees. Unfortunately, where and when an emerging disease will appear are almost impossible to predict. The arrival of the parasitic Varroa mite into the Hawaiian honey bee population allowed us to investigate changes in the prevalence, load, and strain diversity of honey bee viruses. The mite increased the prevalence of a single viral species, deformed wing virus (DWV), from ~10 to 100% within honey bee populations, which was accompanied by a millionfold increase in viral titer and a massive reduction in DWV diversity, leading to the predominance of a single DWV strain. Therefore, the global spread of Varroa has selected DWV variants that have emerged to allow it to become one of the most widely distributed and contagious insect viruses on the planet.
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Bingham D, Martin SJ, Macrae IM, Carswell HVO. Watermaze performance after middle cerebral artery occlusion in the rat: the role of sensorimotor versus memory impairments. J Cereb Blood Flow Metab 2012; 32:989-99. [PMID: 22373646 PMCID: PMC3367220 DOI: 10.1038/jcbfm.2012.16] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
In rodent stroke models, investigation of deficits in spatial memory using the Morris watermaze may be confounded by coexisting sensory or motor impairments. To target memory specifically, we devised a watermaze protocol to minimize the impact of sensory and motor impairments in female Lister-hooded rats exposed to proximal electrocoagulation of the middle cerebral artery (MCAO). Rats were trained in a reference-memory task comprising 4 trials/day; trial 1 being a probe trial (platform absent for the first 60 seconds). Training ended once animals reached a strict criterion based on the probe-trial performance. Memory retention was tested 1, 7, and 28 days later. The MCAO did not affect the number of days to reach criterion during acquisition or the time spent in target quadrant during retention testing, compared with sham or unoperated rats. However, MCAO rats showed slightly poorer accuracy in crossing the platform location and increased thigmotactic swimming compared with controls. Our results show that spatial memory deficits are minimal in this rodent stroke model, and suggest that previously published watermaze impairments are attributable to sensory and motor deficits but not memory deficits. We recommend using probe trials and training to a predetermined performance criterion in future studies assessing watermaze memory deficits in rodent stroke models.
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Martin SJ, Currie MJ, Deeks LS, Cooper GM, Parker RM, Del Rosario R, Hocking JS, Bowden FJ. P75 Do cash incentives increase the uptake of chlamydia testing in pharmacies? Br J Vener Dis 2012. [DOI: 10.1136/sextrans-2012-050601c.75] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Martin SJ, Shemilt S, Drijfhout FP. Effect of time on colony odour stability in the ant Formica exsecta. Naturwissenschaften 2012; 99:327-31. [PMID: 22358182 DOI: 10.1007/s00114-012-0898-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2011] [Revised: 01/18/2012] [Accepted: 02/10/2012] [Indexed: 11/28/2022]
Abstract
Among social insects, maintaining a distinct colony profile allows individuals to distinguish easily between nest mates and non-nest mates. In ants, colony-specific profiles can be encoded within their cuticular hydrocarbons, and these are influenced by both environmental and genetic factors. Using nine monogynous Formica exsecta ant colonies, we studied the stability of their colony-specific profiles at eight time points over a 4-year period. We found no significant directional change in any colony profile, suggesting that genetic factors are maintaining this stability. However, there were significant short-term effects of season that affected all colony profiles in the same direction. Despite these temporal changes, no significant change in the profile variation within colonies was detected: each colony's profile responded in similar manner between seasons, with nest mates maintaining closely similar profiles, distinct from other colonies. These findings imply that genetic factors may help maintain the long-term stability of colony profile, but environmental factors can influence the profiles over shorter time periods. However, environmental factors do not contribute significantly to the maintenance of diversity among colonies, since all colonies were affected in a similar way.
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Martin SJ, Vitikainen E, Drijfhout FP, Jackson D. Conspecific ant aggression is correlated with chemical distance, but not with genetic or spatial distance. Behav Genet 2011; 42:323-31. [PMID: 21928047 DOI: 10.1007/s10519-011-9503-0] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2011] [Accepted: 09/08/2011] [Indexed: 10/17/2022]
Abstract
Five possible mechanisms might underlie kin recognition in social groups: spatial location, familiarity through prior association, phenotype matching, recognition alleles, or rejecting unfamiliar cues. Kin recognition by phenotype matching relies on a strong correlation between genotype and phenotype. Aggression bioassays are the standard method for investigating recognition in animals, particularly social insect interactions among nestmates and non-nestmates. These bioassays typically pay little regard to how outcomes are determined by differences in chemical recognition cues of the test subjects, because the system of signal coding was unknown until recently. We exploited the known nestmate recognition system of the ant Formica exsecta to investigate aggression between 24 pairs of colonies across a range of chemical (Z9-alkene & n-alkanes), genetic, and spatial distances. The whole Z9-alkene chemical profile was the only significant (p < 0.001) predictor of aggression levels. Aggression was a nonlinear step function of Z9-alkene chemical distance, where a small change in chemical profile resulted in a rapid behavioural transition from non-aggression to overt aggression. These findings raise questions surrounding our current understanding of recognition systems, because they support phenotype matching to a colony chemical profile without a significant genetic or spatial component.
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Munday JS, French AF, Martin SJ. Cutaneous malignant melanoma in an 11-month-old Russian blue cat. N Z Vet J 2011; 59:143-6. [DOI: 10.1080/00480169.2011.561779] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Helanterä H, Lee YR, Drijfhout FP, Martin SJ. Genetic diversity, colony chemical phenotype, and nest mate recognition in the ant Formica fusca. Behav Ecol 2011. [DOI: 10.1093/beheco/arr037] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Frye GC, Jeffrey Brinker C, Ricco AJ, Martin SJ, Hilliard J, Doughty DH. Sol-Gel Coatings on Acoustic Wave Devices: Thin Film Characterization and Chemical Sensor Development. ACTA ACUST UNITED AC 2011. [DOI: 10.1557/proc-180-583] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
ABSTRACTWe have investigated the use of porous oxide coatings, formed using sol-gel chemistry routes, as the discriminating elements of acoustic wave (AW) chemical sensors. These coatings provide several unique advantages: durability, high adsorption capacity based on large surface areas, and chemical selectivity based on both controlled pore size and acid/base, ion exchange or chelation chemistry. The porosity of these coatings is determined by performing nitrogen adsorption isotherms using the AW device response to mass changes to monitor the uptake of nitrogen at 77 K. These studies demonstrate how sol-gel chemistry and film deposition can be combined to tailor the microstructure of thin oxide coatings. The chemical sensitivity and selectivity obtained with this class of coatings will be demonstrated using several examples: hydrous titanate ion exchange coatings, zeolite/silicate microcomposite coatings, and surface-modified silicate films.
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Frye GC, Ricco AJ, Martin SJ, Jeffrey Brinker C. Characterization of the Surface Area and Porosity of Sol-Gel Films Using Saw Devices. ACTA ACUST UNITED AC 2011. [DOI: 10.1557/proc-121-349] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
ABSTRACTA novel technique for accurately obtaining nitrogen adsorption isotherms on thin porous films has been developed. These isotherms are useful for characterizing the surface area and pore size distribution of porous samples. The sensitivity to adsorbed nitrogen is increased by several orders of magnitude over conventional techniques by forming the test film on the substrate of a surface acoustic wave (SAW) device. This device functions as a microbalance able to detect less than 100 pg/cm2 of film. Surface areas and pore size distributions calculated from adsorption isotherms obtained with this technique on silicate sol-gel films are compared to those for bulk samples prepared from similar sol-gel solutions.
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Gautier FM, Jones S, Li X, Martin SJ. Scope of the organocatalysed asymmetric reductive amination of ketones with trichlorosilane. Org Biomol Chem 2011; 9:7860-8. [DOI: 10.1039/c1ob05965c] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Abstract
Many animals can adjust the sex ratio of their offspring according to their parental ability to invest. In spider mites, larger eggs are likely to be fertilized and produce diploid females, whereas smaller eggs produce haploid males.
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Martin SJ, Helanterä H, Drijfhout FP. Is parasite pressure a driver of chemical cue diversity in ants? Proc Biol Sci 2010; 278:496-503. [PMID: 20610426 DOI: 10.1098/rspb.2010.1047] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Parasites and pathogens are possibly key evolutionary forces driving recognition systems. However, empirical evidence remains sparse. The ubiquitous pioneering ant Formica fusca is exploited by numerous socially parasitic ant species. We compared the chemical cue diversity, egg and nest mate recognition abilities in two Finnish and two UK populations where parasite pressure is high or absent, respectively. Finnish populations had excellent egg and nest mate discrimination abilities, which were lost in the UK populations. The loss of discrimination behaviour correlates with a loss in key recognition compounds (C(25)-dimethylalkanes). This was not owing to genetic drift or different ecotypes since neutral gene diversity was the same in both countries. Furthermore, it is known that the cuticular hydrocarbon profiles of non-host ant species remain stable between Finland and the UK. The most parsimonious explanation for the striking difference in the cue diversity (number of C(25)-dimethylalkanes isomers) between the UK and Finland populations is the large differences in parasite pressure experienced by F. fusca in the two countries. These results have strong parallels with bird (cuckoo) studies and support the hypothesis that parasites are driving recognition cue diversity.
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Martin SJ. Thermal stability of ribosomal ribonucleic acid from baby hamster kidney cells. Biochem J 2010; 101:721-6. [PMID: 16742451 PMCID: PMC1270179 DOI: 10.1042/bj1010721] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
1. RNA has been prepared from baby hamster kidney cells by extraction with a phenol-EDTA mixture and further purified by passing through a column of Sephadex G-25 that had been equilibrated with water. 2. Aging of the total RNA extracts at 4 degrees or heating at 95 degrees followed by rapid cooling caused a conversion of 28s RNA into material sedimenting in sucrose gradients at approx. 18s. 3. When heated RNA was re-extracted with phenol the sedimentation profile was not returned to that of the unheated RNA. 4. The 28s and 18s RNA fractions were collected separately from sucrose gradients by precipitation with 2vol. of ethanol and passed through a Sephadex G-25 column equilibrated with water. 5. Heat treatment of purified 28s RNA at 95 degrees caused the sedimentation coefficient to increase to approx. 40s, whereas similar treatment of 18s RNA caused no significant increase. If the RNA was heated before the Sephadex G-25 treatment the sedimentation coefficient of the 28s and 18s RNA decreased to approx. 12s and 8s. 6. Heating mixtures of purified 28s and 18s RNA at 95 degrees caused some aggregation of 18s material with the 28s fraction.
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Martin SJ, Brown F. Effect of virus infection on the stability and synthesis of actinomycin-resistant ribonucleic acid in baby-hamster kidney cells. Biochem J 2010; 105:987-93. [PMID: 16742575 PMCID: PMC1198417 DOI: 10.1042/bj1050987] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
1. The sucrose-gradient pattern of (32)P-labelled RNA synthesized in actinomycintreated baby-hamster kidney cells infected with foot-and-mouth-disease virus depends greatly on the period of labelling. 2. Fractions are formed in infected cells that sediment at 12-20s and have the same base composition as similar fractions found in non-infected cells that have been treated with actinomycin. 3. In the presence of guanidine, which completely inhibits viral RNA synthesis, these fractions are labelled to a greater extent than in non-infected cells.
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Martin SJ, Brown F. Synthesis of ribonucleic acid in baby-hamster kidney cells in the presence of actinomycin D. Biochem J 2010; 105:979-85. [PMID: 16742574 PMCID: PMC1198416 DOI: 10.1042/bj1050979] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
1. RNA molecules with sedimentation values in sucrose gradients of 12-20s are synthesized in baby-hamster kidney cells even after prolonged incubation in medium containing 1mug. of actinomycin D/ml. 2. The rate of formation of this RNA is dependent on the age of the cultures and is greatest during the exponential phase of growth. 3. Growth of cells on nutritionally poor medium causes degradation and inhibits the synthesis of these RNA fractions. 4. Replacement of the nutritionally poor medium with a rich medium stimulates the synthesis of actinomycin-resistant RNA. This stimulation is blocked by cycloheximide. 5. The base composition of this RNA is characterized by low cytidine and high guanosine values.
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Dunbar ADF, Mokarian-Tabari P, Parnell AJ, Martin SJ, Skoda MWA, Jones RAL. A solution concentration dependent transition from self-stratification to lateral phase separation in spin-cast PS:d-PMMA thin films. THE EUROPEAN PHYSICAL JOURNAL. E, SOFT MATTER 2010; 31:369-375. [PMID: 20407801 DOI: 10.1140/epje/i2010-10592-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2009] [Accepted: 03/11/2010] [Indexed: 05/29/2023]
Abstract
Thin films with a rich variety of different nano-scale morphologies have been produced by spin casting solutions of various concentrations of PS:d-PMMA blends from toluene solutions. During the spin casting process specular reflectivity and off-specular scattering data were recorded and ex situ optical and atomic force microscopy, neutron reflectivity and ellipsometry have all been used to characterise the film morphologies. We show that it is possible to selectively control the film morphology by altering the solution concentration used. Low polymer concentration solutions favour the formation of flat in-plane phase-separated bi-layers, with a d-PMMA-rich layer underneath a PS-rich layer. At intermediate concentrations the films formed consist of an in-plane phase-separated bi-layer with an undulating interface and also have some secondary phase-separated pockets rich in d-PMMA in the PS-rich layer and vice versa. Using high concentration solutions results in laterally phase-separated regions with sharp interfaces. As with the intermediate concentrations, secondary phase separation was also observed, especially at the top surface.
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Couvillon MJ, Hughes WO, Perez-Sato JA, Martin SJ, Roy GG, Ratnieks FL. Sexual selection in honey bees: colony variation and the importance of size in male mating success. Behav Ecol 2010. [DOI: 10.1093/beheco/arq016] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Abstract
Cytotoxic T lymphocytes (CTLs) and natural killer (NK) cells are indispensable factors in the body's ongoing defence against viral infection and tumor development. CTL/NK cells recognize and kill infected or aberrant target cells by two major pathways: either through introduction of a battery of proteases - called granzymes - to the target cell cytosol, or through TNF superfamily-dependent killing. During granzyme-dependent killing, target cell death is quick and efficient and is mediated by multiple granzymes, acting via redundant cell death pathways. Although granzyme-mediated cell death has been intensively studied, recent work has also hinted at an alternative, proinflammatory role for these enzymes. Thus, in addition to their well-established role as intracellular effectors of target cell death, recent data suggest that granzymes may have an extracellular role in the propagation of immune signals. In this study, we discuss the role of granzymes as central factors in antitumor immunity, as well possible roles for these proteases as instigators of inflammation.
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Cullen SP, Martin SJ. Caspase activation pathways: some recent progress. Cell Death Differ 2009; 16:935-8. [PMID: 19528949 DOI: 10.1038/cdd.2009.59] [Citation(s) in RCA: 145] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
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Takahashi JI, Martin SJ, Ono M, Shimizu I. Male production by non-natal workers in the bumblebee, Bombus deuteronymus (Hymenoptera: Apidae). J ETHOL 2009. [DOI: 10.1007/s10164-009-0155-y] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Martin SJ, Drijfhout FP. How reliable is the analysis of complex cuticular hydrocarbon profiles by multivariate statistical methods? J Chem Ecol 2009; 35:375-82. [PMID: 19263167 DOI: 10.1007/s10886-009-9610-z] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2008] [Revised: 12/08/2008] [Accepted: 02/23/2009] [Indexed: 05/25/2023]
Abstract
Numerous recent studies have correlated cuticular hydrocarbon profiles with a wide range of behaviors, particularly in social insects. These findings are wholly or partly based on multivariate statistical methods such as discriminate analysis (DA) or principal component analysis (PCA). However, these methods often provide limited insight into the biological processes that generate the small differences usually detected. This may be a consequence of variability in the system due to inadequate sample sizes and the assumption that all compounds are independent. A fundamental problem is that these methods combine rather than separate the effects of signal components. By using cuticular hydrocarbon data from previous social insect studies, we showed that: (1) in 13 species of Formica ants and seven species of Vespa hornets, at least one group of hydrocarbons in each species was highly (r(2) > 0.8) correlated, indicating that all compounds are not independent; (2) DA was better at group separation that PCA; (3) the relationships between colonies (chemical distance) were unstable and sensitive to variability in the system; and (4) minor compounds had a disproportionately large effect on the analysis. All these factors, along with sample size, need to be considered in the future analysis of complex chemical profiles.
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