51
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Obbard DJ. The genome sequence of a drosophilid fruit fly, Drosophila funebris (Fabricius, 1789). Wellcome Open Res 2023; 8:437. [PMID: 38798998 PMCID: PMC11126897 DOI: 10.12688/wellcomeopenres.20035.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/29/2023] [Indexed: 05/29/2024] Open
Abstract
We present a genome assembly from an individual male Drosophila funebris (drosophilid fruit fly; Arthropoda; Insecta; Diptera; Drosophilidae). The genome sequence is 181.1 megabases in span. Most of the assembly is scaffolded into 7 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 16.15 kilobases in length.
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52
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Wawman DC, Candelin G. The genome sequence of the Swift Louse Fly Crataerina pallida (Latreille, 1812). Wellcome Open Res 2023; 8:434. [PMID: 37920844 PMCID: PMC10618637 DOI: 10.12688/wellcomeopenres.20097.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/19/2023] [Indexed: 11/04/2023] Open
Abstract
We present a genome assembly from an individual female Crataerina pallida (the Swift Louse Fly; Arthropoda; Insecta; Diptera; Hippoboscidae). The genome sequence is 177.0 megabases in span. Most of the assembly is scaffolded into 6 chromosomal pseudomolecules, including the X chromosome. The mitochondrial genome has also been assembled and is 21.57 kilobases in length.
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53
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Crowley LM, Akinmusola RY. The genome sequence of a druid fly, Clusia tigrina (Fallén, 1820). Wellcome Open Res 2023; 8:430. [PMID: 38449716 PMCID: PMC10915360 DOI: 10.12688/wellcomeopenres.20109.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/21/2023] [Indexed: 03/08/2024] Open
Abstract
We present a genome assembly from an individual male Clusia tigrina (a druid fly; Arthropoda; Insecta; Diptera; Clusiidae). The genome sequence is 1,216.4 megabases in span. Most of the assembly is scaffolded into 5 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 17.68 kilobases in length.
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54
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Boyes D, Boyes C. The genome sequence of the Scalloped Oak, Crocallis elinguaria (Linneas, 1758). Wellcome Open Res 2023; 8:426. [PMID: 38644930 PMCID: PMC11031643 DOI: 10.12688/wellcomeopenres.20081.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/18/2023] [Indexed: 04/23/2024] Open
Abstract
We present a genome assembly from an individual female Crocallis elinguaria (the Scalloped Oak; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 430.4 megabases in span. Most of the assembly is scaffolded into 17 chromosomal pseudomolecules, including the Z and W sex chromosomes. The mitochondrial genome has also been assembled and is 16.86 kilobases in length. Gene annotation of this assembly on Ensembl identified 17,741 protein coding genes.
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55
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Edgecombe GD, Sivell D. The genome sequence of the centipede Strigamia acuminata (Leach, 1816). Wellcome Open Res 2023; 8:420. [PMID: 37808388 PMCID: PMC10556566 DOI: 10.12688/wellcomeopenres.19941.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/18/2023] [Indexed: 10/10/2023] Open
Abstract
We present a genome assembly from an individual male Strigamia acuminata (centipede; Arthropoda; Chilopoda; Geophilomorpha; Geophilidae; Linotaeniinae). The genome sequence is 237.5 megabases in span. Most of the assembly is scaffolded into 11 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 15.07 kilobases in length.
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56
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Hawkins SJ, Mieszkowska N, Mrowicki R. The genome sequence of the common limpet, Patella vulgata (Linnaeus, 1758). Wellcome Open Res 2023; 8:418. [PMID: 37994322 PMCID: PMC10663661 DOI: 10.12688/wellcomeopenres.20008.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/06/2023] [Indexed: 11/24/2023] Open
Abstract
We present a genome assembly from an individual Patella vulgata (the common limpet; Mollusca; Gastropoda; Patellogastropoda; Patellidae). The genome sequence is 695.4 megabases in span. Most of the assembly is scaffolded into 9 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 14.93 kilobases in length. Gene annotation of this assembly on Ensembl identified 19,378 protein coding genes.
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57
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Lees DC. The genome sequence of the Autumnal Rustic, Eugnorisma glareosa (Esper, 1788). Wellcome Open Res 2023; 8:410. [PMID: 38779049 PMCID: PMC11109686 DOI: 10.12688/wellcomeopenres.19987.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/04/2023] [Indexed: 05/25/2024] Open
Abstract
We present a genome assembly from an individual male Eugnorisma glareosa (the Autumnal Rustic; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 631.0 megabases in span. Most of the assembly is scaffolded into 30 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled and is 15.39 kilobases in length. Gene annotation of this assembly on Ensembl identified 19,768 protein coding genes.
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58
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Christenhusz MJM. The genome sequence of bittersweet, Solanum dulcamara L. (Solanaceae). Wellcome Open Res 2023; 8:409. [PMID: 37869734 PMCID: PMC10585204 DOI: 10.12688/wellcomeopenres.20004.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/05/2023] [Indexed: 10/24/2023] Open
Abstract
We present a genome assembly from an individual Solanum dulcamara (bittersweet; Eudicot; Magnoliopsida; Solanales; Solanaceae). The genome sequence is 946.3 megabases in span. Most of the assembly is scaffolded into 12 chromosomal pseudomolecules. The mitochondrial and plastid genomes have also been assembled, with lengths of 459.22 kilobases and 161.98 kilobases respectively.
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59
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Barclay MVL. The genome sequence of a ground beetle, Leistus spinibarbis (Fabricius, 1775). Wellcome Open Res 2023; 8:412. [PMID: 37881256 PMCID: PMC10594052 DOI: 10.12688/wellcomeopenres.19997.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/04/2023] [Indexed: 10/27/2023] Open
Abstract
We present a genome assembly from an individual male Leistus spinibarbis (a ground beetle; Arthropoda; Insecta; Coleoptera; Carabidae). The genome sequence is 235.1 megabases in span. Most of the assembly is scaffolded into 23 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled and is 15.82 kilobases in length. Gene annotation of this assembly on Ensembl identified 23,576 protein coding genes.
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60
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Lees DC. The genome sequence of the Grey Pine Carpet, Thera obeliscata (Hübner, 1787). Wellcome Open Res 2023; 8:408. [PMID: 38764975 PMCID: PMC11099514 DOI: 10.12688/wellcomeopenres.20005.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/06/2023] [Indexed: 05/21/2024] Open
Abstract
We present a genome assembly from an individual male Thera obeliscata (the Grey Pine Carpet; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 404.7 megabases in span. Most of the assembly is scaffolded into 18 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled and is 17.5 kilobases in length.
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61
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Boyes D. The genome sequence of the Diamondback Moth, Plutella xylostella (Linnaeus, 1758). Wellcome Open Res 2023; 8:404. [PMID: 38779055 PMCID: PMC11109710 DOI: 10.12688/wellcomeopenres.20006.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/06/2023] [Indexed: 05/25/2024] Open
Abstract
We present a genome assembly from an individual male Plutella xylostella (the Diamondback Moth; Arthropoda; Insecta; Lepidoptera; Plutellidae). The genome sequence is 323.3 megabases in span. Most of the assembly is scaffolded into 31 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled and is 35.12 kilobases in length. Gene annotation of this assembly on Ensembl identified 17,190 protein coding genes.
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62
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Boyes D, Mulley JF. The genome sequence of the Six-striped Rustic, Xestia sexstrigata (Haworth, 1809). Wellcome Open Res 2023; 8:399. [PMID: 38779048 PMCID: PMC11109539 DOI: 10.12688/wellcomeopenres.19988.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/04/2023] [Indexed: 05/25/2024] Open
Abstract
We present a genome assembly from an individual female Xestia sexstrigata (the Six-striped Rustic; Arthropoda; Insecta; Lepidoptera; Noctuidae). The genome sequence is 638.3 megabases in span. Most of the assembly is scaffolded into 32 chromosomal pseudomolecules, including the W and Z sex chromosomes. The mitochondrial genome has also been assembled and is 15.36 kilobases in length. Gene annotation of this assembly on Ensembl identified 15,104 protein coding genes.
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63
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Crowley LM. The genome sequence of the Orange-tailed Mining Bee, Andrena haemorrhoa (Fabricius, 1781). Wellcome Open Res 2023; 8:396. [PMID: 38813552 PMCID: PMC11134145 DOI: 10.12688/wellcomeopenres.19982.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 09/04/2023] [Indexed: 05/31/2024] Open
Abstract
We present a genome assembly from an individual female Andrena haemorrhoa (the Orange-tailed Mining Bee; Arthropoda; Insecta; Hymenoptera; Andrenidae). The genome sequence is 330.7 megabases in span. Most of the assembly is scaffolded into 7 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 16.46 kilobases in length. Gene annotation of this assembly on Ensembl identified 10,908 protein coding genes.
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64
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Falk S, Monks J. The genome sequence of the painted nomad bee, Nomada fucata (Panzer, 1798). Wellcome Open Res 2023; 8:395. [PMID: 38385126 PMCID: PMC10879756 DOI: 10.12688/wellcomeopenres.19927.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/18/2023] [Indexed: 02/23/2024] Open
Abstract
We present a genome assembly from an individual female Nomada fucata (the painted nomad bee; Arthropoda; Insecta; Hymenoptera; Apidae). The genome sequence is 264.1 megabases in span. Most of the assembly is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 22.06 kilobases in length. Gene annotation of this assembly on Ensembl identified 10,173 protein coding genes.
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65
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Falk S, Monks J. The genome sequence of the fork-jawed nomad bee, Nomada ruficornis (Linnaeus, 1758). Wellcome Open Res 2023; 8:394. [PMID: 38058536 PMCID: PMC10697131 DOI: 10.12688/wellcomeopenres.19928.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/18/2023] [Indexed: 12/08/2023] Open
Abstract
We present a genome assembly from an individual male Nomada ruficornis (the fork-jawed nomad bee; Arthropoda; Insecta; Hymenoptera; Apidae). The genome sequence is 273.0 megabases in span. Most of the assembly is scaffolded into 16 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 20.66 kilobases in length.
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66
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Falk S, Lennon R. The genome sequence of a satellite fly, Leucophora obtusa (Zetterstedt, 1837). Wellcome Open Res 2023; 8:392. [PMID: 38283326 PMCID: PMC10811419 DOI: 10.12688/wellcomeopenres.19920.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/17/2023] [Indexed: 01/30/2024] Open
Abstract
We present a genome assembly from an individual female Leucophora obtusa (a satellite fly; Arthropoda; Insecta; Diptera; Anthomyiidae). The genome sequence is 1,289.8 megabases in span. Most of the assembly is scaffolded into 6 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled and is 18.72 kilobases in length.
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67
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Crowley LM, Price BW, Allan EL, Eagles M. The genome sequence of the Common Darter, Sympetrum striolatum (Charpentier, 1840). Wellcome Open Res 2023; 8:389. [PMID: 38434743 PMCID: PMC10904951 DOI: 10.12688/wellcomeopenres.19937.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/18/2023] [Indexed: 03/05/2024] Open
Abstract
We present a genome assembly from an individual female Sympetrum striolatum (the Common Darter; Arthropoda; Insecta; Odonata; Libellulidae). The genome sequence is 1349.6 megabases in span. Most of the assembly is scaffolded into 12 chromosomal pseudomolecules, including the X sex chromosome. The mitochondrial genome has also been assembled and is 16.16 kilobases in length.
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68
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Lawniczak MK, Crowley LM, McAlister E. The genome sequence of the dark-edged bee fly, Bombylius major (Linnaeus, 1758). Wellcome Open Res 2023; 8:379. [PMID: 38533437 PMCID: PMC10964003 DOI: 10.12688/wellcomeopenres.19804.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/27/2023] [Indexed: 03/28/2024] Open
Abstract
We present a genome assembly from an individual male Bombylius major (the dark-edged bee fly; Arthropoda; Insecta; Diptera; Bombyliidae). The genome sequence is 304.3 megabases in span. The whole assembly is scaffolded into 7 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 17.8 kilobases in length. Gene annotation of this assembly on Ensembl identified 10,852 protein coding genes.
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69
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Crowley LM, Sivell O, Ashworth M, Poole O. The genome sequence of the Figwort Cheilosia, Cheilosia variabilis (Panzer, 1798). Wellcome Open Res 2023; 8:377. [PMID: 37981983 PMCID: PMC10654491 DOI: 10.12688/wellcomeopenres.19851.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/08/2023] [Indexed: 11/21/2023] Open
Abstract
We present a genome assembly from an individual male Cheilosia variabilis (the Figwort Cheilosia; Arthropoda; Insecta; Diptera; Syrphidae). The genome sequence is 414.7 megabases in span. Most of the assembly is scaffolded into 7 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 16.77 kilobases in length.
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70
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Brittain R, Brenen M, McTierney S, Adkins P, Mrowicki R, Harley J. The genome sequence of the European plaice, Pleuronectes platessa (Linnaeus, 1758). Wellcome Open Res 2023; 8:367. [PMID: 38586161 PMCID: PMC10997986 DOI: 10.12688/wellcomeopenres.19397.1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/16/2023] [Indexed: 04/09/2024] Open
Abstract
We present a genome assembly from an individual Pleuronectes platessa(the European plaice; Chordata; Actinopteri; Pleuronectiformes; Pleuronectidae). The genome sequence is 687.4 megabases in span. Most of the assembly is scaffolded into 24 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 17.4 kilobases in length.
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71
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van der Kooij J, Vernes SC, Teeling EC, Mai M, Johannessen LE, Gundersen G. The genome sequence of the northern bat, Eptesicus nilssonii (Keyserling & Blasius, 1839). Wellcome Open Res 2023; 8:362. [PMID: 38774491 PMCID: PMC11106602 DOI: 10.12688/wellcomeopenres.19896.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/14/2023] [Indexed: 05/24/2024] Open
Abstract
We present a genome assembly from an individual Eptesicus nilssonii (the northern bat; Chordata; Mammalia; Chiroptera; Vespertilionidae), derived from the placental tissue of a pregnancy that resulted a male pup. The genome sequence is 2,064.1 megabases in span. Most of the assembly is scaffolded into 26 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 17.04 kilobases in length.
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72
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Ruedi M, Vernes SC, Teeling EC, Mai M. The genome sequence of the Soprano Pipistrelle, Pipistrellus pygmaeus (Leach, 1825). Wellcome Open Res 2023; 8:360. [PMID: 38764969 PMCID: PMC11101169 DOI: 10.12688/wellcomeopenres.19895.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/14/2023] [Indexed: 05/21/2024] Open
Abstract
We present a genome assembly from an individual male Pipistrellus pygmaeus (the Soprano Pipistrelle; Chordata; Mammalia; Chiroptera; Vespertilionidae). The genome sequence is 1,895.1 megabases in span. Most of the assembly is scaffolded into 23 chromosomal pseudomolecules, including the X and Y sex chromosomes. The mitochondrial genome has also been assembled and is 17.18 kilobases in length.
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73
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Short S, Green Etxabe A, Robinson A, Spurgeon D, Kille P. The genome sequence of the red compost earthworm, Lumbricus rubellus (Hoffmeister, 1843). Wellcome Open Res 2023; 8:354. [PMID: 38618197 PMCID: PMC11015115 DOI: 10.12688/wellcomeopenres.19834.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/02/2023] [Indexed: 04/16/2024] Open
Abstract
We present a genome assembly from an individual Lumbricus rubellus (the red compost earthworm; Annelida; Clitellata; Haplotaxida; Lumbricidae). The genome sequence is 787.5 megabases in span. Most of the assembly is scaffolded into 18 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 15.81 kilobases in length. Gene annotation of this assembly on Ensembl identified 33,426 protein coding genes.
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74
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Skipp S, Ablett J. The genome sequence of the Whirlpool Ramshorn snail, Anisus vortex (Linnaeus, 1758). Wellcome Open Res 2023; 8:344. [PMID: 37674878 PMCID: PMC10477736 DOI: 10.12688/wellcomeopenres.19836.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/02/2023] [Indexed: 09/08/2023] Open
Abstract
We present a genome assembly from an individual Anisus vortex (the Whirlpool Ramshorn snail; Mollusca; Gastropoda; Hygrophila; Lymnaeoidea; Planorbidae). The genome sequence is 869.5 megabases in span. Most of the assembly is scaffolded into 18 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 13.57 kilobases in length.
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75
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Hayward A, Lohse K, Vila R, Laetsch DR, Hedlund JS. The genome sequence of the Brown Argus, Aricia agestis (Denis & Schiffermüller, 1775). Wellcome Open Res 2023; 8:336. [PMID: 38404635 PMCID: PMC10884594 DOI: 10.12688/wellcomeopenres.19784.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/24/2023] [Indexed: 02/27/2024] Open
Abstract
We present genome assemblies from two male Aricia agestis specimens (the Brown Argus; Arthropoda; Insecta; Lepidoptera; Lycaenidae). The genome sequences are 435.3 and 437.4 megabases in span. Each assembly is scaffolded into 23 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genomes were assembled and are 15.47 and 15.45 kilobases in length. Gene annotation of these assemblies on Ensembl identified 12,688 and 12,654 protein coding genes.
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