76
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Micheletti D, Muccioli L, Berardi R, Ricci M, Zannoni C. Effect of nanoconfinement on liquid-crystal polymer chains. J Chem Phys 2005; 123:224705. [PMID: 16375493 DOI: 10.1063/1.2125707] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We apply a Monte Carlo polymerization model for Gay-Berne [J. Chem. Phys. 74, 3316 (1981)] monomers that we have recently introduced [J. Chem. Phys. 121, 9123 (2004)] to investigate with computer simulations the effects of nanoconfinement and anchoring type on the structure of the main-chain liquid-crystal polymers formed in thin films, in the presence of several types of surface alignment: parallel to the interface (random and uniform) or perpendicular to it (homeotropic). We perform first a study of the confined monomers and then we examine the features of the polymer chains obtained from an isotropic or nematic sample. We find a significant effect of the anchoring conditions on the characteristics of the chains and particularly striking differences between planar and homeotropic boundaries. Furthermore, our results indicate that the choice of different anchorings could be used to tune the linearity and degree of polymerization of the chains.
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20 |
24 |
77
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Nemati A, Shadpour S, Querciagrossa L, Mori T, Zannoni C, Hegmann T. Highly Sensitive, Tunable Chirality Amplification through Space Visualized for Gold Nanorods Capped with Axially Chiral Binaphthyl Derivatives. ACS NANO 2019; 13:10312-10326. [PMID: 31424907 DOI: 10.1021/acsnano.9b03787] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
The creation and transmission of chirality in molecular systems is a well-known, widely applied notion. Our understanding of how the chirality of nanomaterials can be controlled, measured, transmitted through space, and applied is less well understood. Dynamic assemblies for chiral sensing or metamaterials engineered from chiral nanomaterials require exact methods to determine transmission and amplification of nanomaterial chirality through space. We report the synthesis of a series of gold nanorods (GNRs) with a constant aspect ratio of ∼4.3 capped with C2-symmetric, axially chiral binaphthyl thiols, preparation of dispersions in the nematic liquid crystal 5CB, measurements of the helical pitch, and the determination of the helical twisting power as well as the average distance between the chiral nanomaterial additives. By comparison to the neat organic chiral derivatives, we demonstrate how the amplification of chirality facilitated by GNRs decorated with chiral molecules can be used to clearly distinguish the chiral induction strength of a homologous series of binaphthyl derivatives, differing only in the length of the nontethered aliphatic chain, in the induced chiral nematic liquid crystal phase. Considering systematic errors in sample preparation and optical measurements, these chiral molecules would otherwise be deemed identical with respect to chiral induction. Notably, we find some of the highest ever-reported values of the helical twisting power. We further support our experimentally derived arguments of a more comprehensive understanding of chirality transfer by calculations of a suitable pseudoscalar chirality indicator.
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23 |
78
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Berardi R, Spinozzi F, Zannoni C. A multitechnique maximum entropy approach to the determination of the orientation and conformation of flexible molecules in solution. J Chem Phys 1998. [DOI: 10.1063/1.476975] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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27 |
23 |
79
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Bellini T, Buscaglia M, Chiccoli C, Mantegazza F, Pasini P, Zannoni C. Nematics with quenched disorder: how long will it take to heal? PHYSICAL REVIEW LETTERS 2002; 88:245506. [PMID: 12059315 DOI: 10.1103/physrevlett.88.245506] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2002] [Indexed: 05/23/2023]
Abstract
Nematics with quenched disorder have been repeatedly predicted to form glass phases. Here we present turbidity experiments and computer simulations aimed at studying glass key features such as dynamics and history dependence in randomly perturbed nematics. Electric field-cooling alignment has been employed to prepare samples in suitably oriented starting states. Remarkable remnant order and slow dynamics are found both by experiment and simulations, indicating that random disorder can, by itself, induce a nematic glass state even without perturber restructuring.
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23 |
23 |
80
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30 |
23 |
81
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Viceconti M, Zannoni C, Testi D, Cappello A. CT data sets surface extraction for biomechanical modeling of long bones. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 1999; 59:159-166. [PMID: 10386765 DOI: 10.1016/s0169-2607(98)00107-2] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
In modelling applications such as custom-made implants design is useful to have a surface representation of the anatomy of bones rather than the voxel-based representation generated by tomography systems. A voxel-to-surface conversion process is usually done by a 2D segmentation of the images stack. However, other methods allow a direct 3D segmentation of the CT or MRI data set. In the present work, two of these methods, namely the Standard Marching Cube (SMC) and the Discretized Marching Cube (DMC) algorithms, were compared in terms of local accuracy when used to reconstruct the geometry of a human femur. The SMC method was found to be more accurate than the DMC method. The SMC method was capable of reconstructing the inner and outer geometry of a human femur with a peak error lower than 0.9 mm and an average error comparable to the pixel size (0.3 mm). However, the large number of triangles generated by the algorithm may limit its adoption in many modelling applications. The peak error of the DMC algorithm was 1.6 mm but it produced approximately 70% less triangles than the SMC method. From the results of this study, it may be concluded that three dimensional segmentation algorithms are useful not only in visualisation applications but also in the creation of geometry models.
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Comparative Study |
26 |
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82
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Vecchi I, Arcioni A, Bacchiocchi C, Tiberio G, Zanirato P, Zannoni C. Expected and Unexpected Behavior of the Orientational Order and Dynamics Induced by Azobenzene Solutes in a Nematic. J Phys Chem B 2007; 111:3355-62. [PMID: 17388493 DOI: 10.1021/jp0651788] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We have explored the changes in the phase stability, orientational order, and dynamics of the nematic 4-cyano-4'-n-pentylbiphenyl (5CB) doped with either the trans or the cis form of different p-azobenzene derivatives using the ESR spin-probe technique. In particular, we have studied the effects induced by each of the seven nonmesogenic 4-R-phenylazobenzenes (R = H, F, Br, CH3, CF3, On-Bu, Ot-Bu) at 1% and 7% mole fraction on the order parameter <P2> and on the shift of the nematic-isotropic transition temperature (TNI), as reported by a nitroxide spin probe, and we have tried to relate them to the solute shape and charge distribution. In all the cases the presence of the azo-derivative causes a depression of T(NI), more pronounced for the cis isomers. The dependence of <P2> on the reduced temperature T* = T/T(NI) remains the same as that of pure 5CB in all trans-doped samples at 1% and 7% and decreases only slightly in the cis at 1%. However, we observe different and in some cases large variations (up to 25%) in <P2> for the cis at 7%, showing solute effects that go beyond the shift in T(NI). Surprisingly enough, even at the highest concentration, the probe dynamics appears to be essentially independent of the nature, the configuration, and the concentration of the different solutes and very similar to that observed in the pure 5CB.
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83
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Emerson A, Faetti S, Zannoni C. Monte Carlo simulation of the nematic-vapour interface for a Gay-Berne liquid crystal. Chem Phys Lett 1997. [DOI: 10.1016/s0009-2614(97)00488-0] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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28 |
22 |
84
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Berardi R, Micheletti D, Muccioli L, Ricci M, Zannoni C. A computer simulation study of the influence of a liquid crystal medium on polymerization. J Chem Phys 2004; 121:9123-30. [PMID: 15527380 DOI: 10.1063/1.1790453] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
We present a simple molecular level model based on Gay-Berne monomers linked by finitely extendable nonlinear elastic potential bonds for describing main chain polymerization in liquid crystals. We apply the model to study the influence that the order of the medium has on the characteristics of the chains obtained. We find that the chains prepared from the nematic are actually straighter than those obtained from a polymerization in the isotropic phase and that they are characterized by a small number of hairpins as experimentally observed.
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21 |
21 |
85
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van Zandvoort MAMJ, Gerritsen HC, van Ginkel G, Levine YK, Tarroni R, Zannoni C. Distribution of Hydrophobic Probe Molecules in Lipid Bilayers. 2. Time-Resolved Fluorescence Anisotropy Study of Perylene in Vesicles. J Phys Chem B 1997. [DOI: 10.1021/jp9634159] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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28 |
21 |
86
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Emerson APJ, Zannoni C. Monte carlo study of Gay–Berne liquid-crystal droplets. ACTA ACUST UNITED AC 1995. [DOI: 10.1039/ft9959103441] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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30 |
21 |
87
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Bacchiocchi C, Miglioli I, Arcioni A, Vecchi I, Rai K, Fontecchio A, Zannoni C. Order and Dynamics Inside H-PDLC Nanodroplets: An ESR Spin Probe Study. J Phys Chem B 2009; 113:5391-402. [DOI: 10.1021/jp8105887] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16 |
21 |
88
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Orlandi S, Berardi R, Steltzer J, Zannoni C. A Monte Carlo study of the mesophases formed by polar bent-shaped molecules. J Chem Phys 2006; 124:124907. [PMID: 16599725 DOI: 10.1063/1.2176622] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Liquid crystal phases formed by bent-shaped (or "banana") molecules are currently of great interest. Here we investigate by Monte Carlo computer simulations the phases formed by rigid banana molecules modeled combining three Gay-Berne sites and containing either one central or two lateral and transversal dipoles. We show that changing the dipole position and orientation has a profound effect on the mesophase stability and molecular organization. In particular, we find a uniaxial nematic phase only for off-center dipolar models and tilted phases only for the one with terminal dipoles.
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19 |
20 |
89
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Chiccoli C, Pasini P, Skacej G, Zannoni C, Zumer S. Polymer network-induced ordering in a nematogenic liquid: a Monte Carlo study. PHYSICAL REVIEW E 2002; 65:051703. [PMID: 12059573 DOI: 10.1103/physreve.65.051703] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2001] [Indexed: 11/07/2022]
Abstract
In this Monte Carlo study we investigate molecular ordering in a nematogenic liquid with dispersed polymer networks. The polymer network fibers are assumed to have rough surface morphology resulting in a partial randomness in anchoring conditions, while the fiber direction is assumed to be well defined. In particular, we focus on the loss of long-range aligning capability of the network when the degree of disorder in anchoring is increased. This process is monitored by calculating relevant order parameters and the corresponding 2H nuclear magnetic resonance spectra, showing that the aligning ability of the network is lost only for completely disordering anchoring conditions. Moreover, above the nematic-isotropic transition temperature surface-induced paranematic order is detected. In addition, for perfectly smooth fiber surfaces with homeotropic anchoring conditions topological line defects can be observed.
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23 |
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90
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Forlani G, Zannoni C, Tarrini G, Melchionda N, Marchesini G. An empowerment-based educational program improves psychological well-being and health-related quality of life in Type 1 diabetes. J Endocrinol Invest 2006; 29:405-12. [PMID: 16794363 DOI: 10.1007/bf03344123] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Educational programs are reported to improve metabolic control and well-being in Type 1 diabetes mellitus (DM), but the effects of newly- structured interventions, aimed at promoting empowerment in educated patients in active selfcare, have received little attention. Ninety patients with Type 1 DM in intensive insulin treatment were invited to an empowerment-based educational intervention. Changes in quality of life and psychological well-being in the 54 patients participating in the program (median age, 44 yr) were compared with those measured in patients who refused. The following questionnaires were administered at baseline and 12 months later: Psychological General Well-Being (PGWB), Medical Outcome Survey Short-Form 36 (SF-36), and Well-Being Enquiry for Diabetics (WED). Baseline values were indicative of moderate, but significant, psychological distress in the whole cohort. At follow-up, the experimental group had a better metabolic control {glycosylated hemoglobin, -0.4% [time x treatment analysis of variance (ANOVA), p = 0.005 vs controls]}, and a general improvement in comprehensive indices and most scales of PGWB and SF-36. Vitality (p = 0.042) and Social Functioning (p = 0.039) were no longer different from population norm. Similarly, the Symptoms (p = 0.005), Discomfort (p = 0.043) and Impact scales (p = 0.032) of WED, reflecting physical functioning, diabetes-related worries and familial relationships, role functioning and social network, improved significantly in treated patients. An educational empowerment-based intervention significantly improves the psychosocial aspects of diabetes and quality of life also in patients in active and effective self-care. Repeated educational interventions are the way towards a normal life with Type 1 DM.
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19 |
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91
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Chiccoli C, Pasini P, Semeria F, Berggren E, Zannoni C. Computer Simulations of Cylindrically Confined Nematics. ACTA ACUST UNITED AC 2006. [DOI: 10.1080/10587259608031909] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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19 |
19 |
92
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Gali SM, D’Avino G, Aurel P, Han G, Yi Y, Papadopoulos TA, Coropceanu V, Brédas JL, Hadziioannou G, Zannoni C, Muccioli L. Energetic fluctuations in amorphous semiconducting polymers: Impact on charge-carrier mobility. J Chem Phys 2017; 147:134904. [DOI: 10.1063/1.4996969] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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8 |
19 |
93
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Quadrani P, Pasini A, Mattiolli-Belmonte M, Zannoni C, Tampieri A, Landi E, Giantomassi F, Casali F, Biagini G, Tomei-Minardi A. High-resolution 3D scaffold model for engineered tissue fabrication using a rapid prototyping technique. Med Biol Eng Comput 2005; 43:196-9. [PMID: 15865127 DOI: 10.1007/bf02345954] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Rapid prototyping, automatic image processing (computer-aided design (CAD)) and computer-aided manufacturing techniques are opening new and interesting prospects for medical devices and tissue engineering, especially for hard tissues such as bone. The development of a bone high-resolution scaffold prototype using these techniques is described. The results testify to the fidelity existing between microtomographic reconstruction and CAD. Furthermore, stereolithographic manufacturing of this scaffold, which possesses a high degree of similarity to the starting model as monitored by morphological evaluations (mean diameter 569 +/- 147 microm), represents a promising result for regenerative medicine applications.
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20 |
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94
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Benzi C, Cossi M, Barone V, Tarroni R, Zannoni C. A Combined Theoretical and Experimental Approach to Determining Order Parameters of Solutes in Liquid Crystals from 13C NMR Data. J Phys Chem B 2005; 109:2584-90. [PMID: 16851261 DOI: 10.1021/jp045908g] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The ordering properties of an anisotropic liquid crystal can be studied by recording 13C NMR spectra at different temperatures for a number of rigid solutes. The traditional difficulty in analyzing 13C data comes from the scarcity of experimental information about the carbon shielding tensors and from their limited transferability among different solutes. We show that these obstacles can be overcome by computing high-level ab initio shielding tensors, also including the solvent effects by the polarizable continuum model. The reliability of this combined approach is carefully verified, and the order parameters of several solutes are obtained by reanalyzing previously published spectra. The quality of the results is shown to be comparable to deuterium NMR without the need of isotopic substitution.
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95
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Pietropaolo A, Muccioli L, Zannoni C, La Mendola D, Maccarrone G, Pappalardo G, Rizzarelli E. Unveiling the role of histidine and tyrosine residues on the conformation of the avian prion hexarepeat domain. J Phys Chem B 2008; 112:5182-8. [PMID: 18386869 DOI: 10.1021/jp710702q] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The prion protein (PrPC) is a glycoprotein that in mammals, differently from avians, can lead to prion diseases, by misfolding into a beta-sheet-rich pathogenic isoform (PrPSc). Mammal and avian proteins show different N-terminal tandem repeats: PHGGGWGQ and PHNPGY, both containing histidine, whereas tyrosine is included only in the primary sequence of the avian protein. Here, by means of potentiometric, circular dichroism (CD), and molecular dynamics (MD) studies at different pH values, we have investigated the conformation of the avian tetrahexarepeat (PHNPGY)4 (TetraHexaPY) with both N- and C-termini blocked by acetylation and amidation, respectively. We have found, also with the help of a recently proposed protein chirality indicator (Pietropaolo, A.; Muccioli, L.; Berardi, R.; Zannoni, C. Proteins 2008, 70, 667-677), a conformational dependence on the protonation states of histidine and tyrosine residues: the turn formation is pH driven, and at physiological pH a pivotal role is played by the tyrosine OH groups which give rise to a very compact bent structure of backbone upon forming a hydrogen-bond network.
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Research Support, Non-U.S. Gov't |
17 |
18 |
96
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Pizzirusso A, Di Cicco MB, Tiberio G, Muccioli L, Berardi R, Zannoni C. Alignment of Small Organic Solutes in a Nematic Solvent: The Effect of Electrostatic Interactions. J Phys Chem B 2012; 116:3760-71. [DOI: 10.1021/jp3003799] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
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13 |
18 |
97
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Chiccoli C, Pasini P, Sarlah A, Zannoni C, Zumer S. Structures and transitions in thin hybrid nematic films: a Monte Carlo study. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2003; 67:050703. [PMID: 12786126 DOI: 10.1103/physreve.67.050703] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2003] [Indexed: 05/24/2023]
Abstract
We confirm by Monte Carlo simulations of a Lebwohl-Lasher lattice spin model the existence of a biaxially ordered nonbent structure in a liquid-crystalline cell subject to opposing boundary conditions. We report on the observation of the bending transition from the biaxial to the bent-director structure when the temperature of the system is lowered. The structural transition is monitored both by the change of the order parameters and by heat capacity. We discuss the thickness dependence of the transition temperature by means of wetting-induced phenomena and elastic deformations. We propose the correspondence to the phenomenological description, which agrees well without any fitting parameters.
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22 |
18 |
98
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Bacchiocchi C, Zannoni C. Energy transfer in condensed systems The effect of phase organization. Chem Phys Lett 1997. [DOI: 10.1016/s0009-2614(97)00215-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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28 |
18 |
99
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Barmes F, Ricci M, Zannoni C, Cleaver DJ. Computer simulations of hard pear-shaped particles. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2003; 68:021708. [PMID: 14524994 DOI: 10.1103/physreve.68.021708] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2003] [Revised: 06/06/2003] [Indexed: 05/24/2023]
Abstract
We report results obtained from Monte Carlo simulations investigating mesophase formation in two model systems of hard pear-shaped particles. The first model considered is a hard variant of the truncated Stone-expansion model previously shown to form nematic and smectic mesophases when embedded within a 12-6 Gay-Berne-like potential [R. Berardi, M. Ricci, and C. Zannoni, ChemPhysChem 7, 443 (2001)]. When stripped of its attractive interactions, however, this system is found to lose its liquid crystalline phases. For particles of length to breadth ratio k=3, glassy behavior is seen at high pressures, whereas for k=5 several bi- layerlike domains are seen, with high intradomain order but little interdomain orientational correlation. For the second model, which uses a parametric shape parameter based on the generalized Gay-Berne formalism, results are presented for particles with elongation k=3, 4, and 5. Here, the systems with k=3 and 4 fail to display orientationally ordered phases, but the system with k=5 shows isotropic, nematic and, unusual for a hard-particle model, interdigitated smectic A2 phases.
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22 |
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100
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Ricci M, Mazzeo M, Berardi R, Pasini P, Zannoni C. A molecular level simulation of a twisted nematic cell. Faraday Discuss 2010; 144:171-85; discussion 203-22, 467-81. [DOI: 10.1039/b901784d] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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15 |
17 |