Radial profile measurements of plasma pressure-like fluctuations with the heavy ion beam diagnostic on the tokamak ISTTOK

The Heavy Ion Beam Diagnostic (HIBD) on the tokamak ISTTOK (Instituto Superior Técnico TOKamak) has been modified, in terms of signal conditioning, to measure the local fluctuations of the neσ1,2(Te) product (plasma density times the effective ionization cross-section) along the tokamak minor diameter, in 12 sample volumes in the range of -0.7a < r < 0.7a, with a maximum delay time of 1 μs. The corresponding signals show high correlation with the magnetic Mirnov coils in the characteristic MHD frequency range of ISTTOK plasmas and enable the identification of tearing modes. This paper describes the HIBD signal conditioning system and presents a preliminary analysis of the radial profile measurements of local neσ1,2(Te) fluctuations.

A numerical study of fixed frequency reflectometry measurements of plasma filaments with radial and poloidal velocity components

A 2D finite-differences time-domain full-wave code is used to simulate the measurements of plasma filaments with fixed frequency O-mode reflectometry. The plasma is modeled by a linear slab plasma plus a Gaussian perturbation propagating in a direction that can vary from poloidal to radial. The plasma background density gradient is chosen in agreement with the steep edge transport barrier of H-modes in the ASDEX Upgrade (AUG) tokamak. Illustrative results are presented and different types of reflectometry responses are observed depending on filament sizes and propagation directions. The reflectometry signatures obtained here with numerical simulations support previous experimental findings on filament measurements.

Phenotypic surface properties (aggregation, adhesion and biofilm formation) and presence of related genes in beneficial vaginal lactobacilli

AIMS

To evaluate the phenotypic expression of auto-aggregation, adhesion to mucin and biofilm formation of lactobacilli isolated from human vagina and the presence of related genes.

METHODS AND RESULTS

Seven different strains of three Lactobacillus species (Lactobacillus gasseri, Lactobacillus rhamnosus and Lactobacillus reuteri) were evaluated. The auto-aggregation property was determined by spectrophotometric assay and flow cytometry. Adhesion and biofilm formation were assayed by crystal violet staining. The presence of the genes encoding sortases, pilin subunits and surface proteins was evaluated by polymerase chain reactions. The two Lact. reuteri strains assayed showed high auto-aggregation, adhesion to mucin and biofilm formation ability. In these strains, the genes encoding three adhesion proteins were identified. In Lact. rhamnosus CRL (Centro de Referencia para Lactobacilos Culture Collection) 1332, pilus-encoding genes were detected. In all Lact. rhamnosus strains assayed, two genes encoding for other surface proteins related to adhesion and biofilm formation were detected.

CONCLUSIONS

The vaginal lactobacilli assayed exhibited phenotypic and genetic characteristics that were specific for each strain.

SIGNIFICANCE AND IMPACT OF THE STUDY

This is the first study on auto-aggregation, adhesion and biofilm formation of vaginal Lactobacillus strains by phenotypic and genetic assays.

Characterization of damage in Portuguese lupus patients: analysis of a national lupus registry

Background: Although the survival rate has considerably improved, many patients with systemic lupus erythematosus (SLE) develop irreversible organ damage. Objectives: The objectives of this paper are to characterize cumulative damage in SLE patients and identify variables associated with its presence and severity. Methods: A cross-sectional analysis of SLE patients from the Portuguese Lupus register Reuma.pt/SLE in whom damage assessment using the SLICC/ACR-Disability Index (SDI) was available was performed. Predictor factors for damage, defined as SDI ≥ 1, were determined by logistic regression analyses. A sub-analysis of patients with severe damage (SDI ≥ 3) was also performed. Results: In total, 976 patients were included. SDI was ≥1 in 365 patients, of whom 89 had severe damage. Musculoskeletal (24.4%), neuropsychiatric (24.1%) and ocular (17.2%) domains were the most commonly affected. Older age, longer disease duration, renal involvement, presence of antiphospholipid antibodies and current therapy with steroids were independently associated with SDI ≥ 1. The subpopulation with severe damage had, in addition, a greater interval between the first manifestation attributable to SLE and the clinical diagnosis as well as and more frequently early retirement due to SLE. Conclusions: This large lupus cohort confirmed that demographic and clinical characteristics as well as medication are independently associated with damage. Additionally, premature retirement occurs more often in patients with SDI ≥ 3. Diagnosis delay might contribute to damage accrual.

Measurements of the electron temperature fluctuations with a retarding field analyzer on the tokamak ISTTOK

Measurements of the ion temperature fluctuations by retarding field energy analyzed (RFA) based on two point measurements on the exponentially decaying region of the I-V characteristic with two differently DC biased RFA electrodes have been tested and proved in the experiments on the tokamak ISTTOK. In this paper, a DC operation of an RFA has been applied to give direct instantaneous measurements of the electron temperature and electron temperature fluctuations. The results are in good agreement with conventional swept measurements from the RFA. The observed electron temperature fluctuations, 3 mm outside the leading edge of the limiter, have a typical normalized amplitude (standard deviation divided by the average value) of ~13% (T(eav) = 6 eV) and are in opposition to the fluctuations of the floating potential simultaneously measured on the RFA slit.

Intrarenal artery pseudoaneurysm after blunt abdominal trauma: a case report of successful superselective angioembolization

Renal artery pseudoaneurysm is a very rare complication after blunt trauma injury. We report on a case of a 54-year-old man admitted to our hospital for right flank pain and gross hematuria, 5 days after blunt abdominal trauma. The diagnosis of interlobar renal pseudoaneurysm was established by a computed tomography scan and confirmed by angiography. Successful superselective angioembolization was performed. This radiographic intervention is an effective and minimally invasive technique to stop active bleeding from renal artery pseudoaneurysms, when patients are hemodynamically stable and where technically feasible. A review of the literature was carried out.

First results from the LUX dark matter experiment at the Sanford underground research facility

The Large Underground Xenon (LUX) experiment is a dual-phase xenon time-projection chamber operating at the Sanford Underground Research Facility (Lead, South Dakota). The LUX cryostat was filled for the first time in the underground laboratory in February 2013. We report results of the first WIMP search data set, taken during the period from April to August 2013, presenting the analysis of 85.3 live days of data with a fiducial volume of 118 kg. A profile-likelihood analysis technique shows our data to be consistent with the background-only hypothesis, allowing 90% confidence limits to be set on spin-independent WIMP-nucleon elastic scattering with a minimum upper limit on the cross section of 7.6 × 10(-46) cm(2) at a WIMP mass of 33 GeV/c(2). We find that the LUX data are in disagreement with low-mass WIMP signal interpretations of the results from several recent direct detection experiments.

Effect of cross-fostering and oral supplementation with colostrums on performance of newborn piglets

The aim of the experiment was to study the effect on litter performance of two oral supplementation strategies on piglets born weighing 1.35 kg or less (SP; CON: no oral supplementation; COL: supplementation with 15 mL of sow colostrum orally administered to piglets within 4 h after the farrowing was completed). Two levels of cross-fostering strategies, performed 24 h after farrowing, were also studied (HL: litters fixed at 12 piglets, ensuring that less than 50% of the piglets of the litter were SP; LL: litters fixed at 12 piglets, with most of the piglets of the litter being SP; in both cases the aim was to minimize moving piglets from one sow to another as much as possible). The combination of the 2 management strategies described above resulted in a 2 × 2 factorial model. Forty-six litters were used. Litters were allocated to 1 of the 4 treatments: CON-HL, CON-LL, COL-HL, and COL-LL. Piglets were weighed on d 1 and 19 postpartum. Mortality was recorded. On d 4 postpartum, a 2-mL blood sample was obtained from 79 SP piglets born from multiparous sows included in the experiment. To obtain a negative control group, blood samples were obtained on d 4 postpartum from 8 additional SP piglets that were separated from their mothers at birth and bottle fed with milk replacement for 12 h. LL sows had lower within-litter CV of BW at d 1 than HL sows (16.2% vs. 21.9% ± 0.91%; P = 0.003), but they did not differ for litter CV of BW at d 19 (23.2% vs. 23.4% ± 1.72%). At d 19, HL sows had fewer dead piglets per litter than LL sows (0.80 vs. 1.69 ± 0.307; P = 0.022), and COL-HL sows had fewer dead piglets per litter than CON-HL (0.47 vs. 1.14 ± 0.160; P = 0.062). Cross-fostering SP in the same litter did not prevent a litter's CV of BW from increasing at weaning. Piglets from the COL group had higher IgG concentration than piglets from the CON group (P = 0.001). However, piglets from the negative control group had lower IgG concentration than those from the COL and CON groups (5.41 ± 2.320 vs. 30.60 ± 1.582 and 21.53 ± 0.951 mg/mL, respectively; P < 0.001 in both cases). Allocating small piglets to the same litter through cross-fostering had a negative effect on mortality and did not improve litter CV of BW at weaning. Colostrum supplementation of SP piglets improved IgG blood level on d 4. In addition, in nonhomogenized litters, colostrum supplementation of SP piglets might be a good management strategy to improve litter performance.

Podocyte injury in pure membranous and proliferative lupus nephritis: distinct underlying mechanisms of proteinuria?

Proteinuria is a major feature of lupus nephritis (LN) and reflects podocyte injury. Analysis of podocyte biomarkers was performed attempting to identify if podocyte phenotype is distinct in pure membranous and proliferative LN. Expression of synaptopodin, Wilms tumor protein 1 (WT1), glomerular epithelial protein 1 (GLEPP1) and nephrin was evaluated in 52 LN biopsies by immunohistochemistry. Preserved synaptopodin expression was observed in only 10 (19.2%) of all biopsies while 42 (80.8%) had reduced expression. Both groups had comparable proteinuria at the time of biopsy (p = 0.22); however, in the mean follow-up of four years there was a tendency toward lower mean levels of proteinuria in patients with preserved synaptopodin staining (0.26±0.23 vs. 0.84±0.90 g/24 h, p = 0.05) compared with those with diminished expression. Thirty-nine (75%) biopsies were classified as proliferative and 13 (25%) as pure membranous. Comparison of podocyte biomarkers demonstrated a predominance of preserved staining of synaptopodin (69.2%), WT1 (69.2%), GLEPP1 (53.9%) and nephrin (60%) in the pure membranous group whereas only <10% of the proliferative showed preserved expression. Our data suggest that in proliferative forms there seems to occur structural podocyte damage, whereas in the pure membranous the predominant preserved pattern suggests a dysfunctional podocyte lesion that may account for the better long-term prognosis of proteinuria outcome.

Integrated ecotoxicological assessment of marine sediments affected by land-based marine fish farm effluents: physicochemical, acute toxicity and benthic community analyses

An integrated ecotoxicological assessment of marine sediments affected by land-based marine fish farm effluents was developed using physicochemical and benthic community structure analyses and standardised laboratory bioassays with bacteria (Vibrio fischeri), amphipods (Ampelisca brevicornis) and sea urchin larvae (Paracentrotus lividus). Intertidal sediment samples were collected at five sites of the Rio San Pedro (RSP) creek, from the aquaculture effluent to a clean site. The effective concentration (EC50) from bacterial bioluminescence and A. brevicornis survival on whole sediments and P. lividus larval developmental success on sediment elutriates were assessed. Numbers of species, abundance and Shannon diversity were the biodiversity indicators measured in benthic fauna of sediment samples. In parallel, redox potential, pH, organic matter and metal levels (Cd, Cu, Ni, Pb and Zn) in the sediment and dissolved oxygen in the interstitial water were measured in situ. Water and sediment physicochemical analysis revealed the exhibition of a spatial gradient in the RSP, evidenced by hypoxia/anoxia, reduced and acidic conditions, high organic enrichment and metal concentrations at the most contaminated sites. Whereas, the benthic fauna biodiversity decreased the bioassays depicted decreases in EC50, A. brevicornis survival, P. lividus larval success at sampling sites closer to the studied fish farms. This study demonstrates that the sediments polluted by fish farm effluents may lead to alterations of the biodiversity of the exposed organisms.

Recombination dynamics in InGaN/GaN nanowire heterostructures on Si(111)

We have performed room-temperature time-resolved photoluminescence measurements on samples that comprise InGaN insertions embedded in GaN nanowires. The decay curves reveal non-exponential recombination dynamics that evolve into a power law at long times. We find that the characteristic power-law exponent increases with emission photon energy. The data are analyzed in terms of a model that involves an interplay between a radiative state and a metastable charge-separated state. The agreement between our results and the model points towards an emission dominated by carriers localized on In-rich nanoclusters that form spontaneously inside the InGaN insertions.

The ghrelin O-acyltransferase-ghrelin system reduces TNF-α-induced apoptosis and autophagy in human visceral adipocytes

AIMS/HYPOTHESIS

Proinflammatory and proapoptotic cytokines such as TNF-α are upregulated in human obesity. We evaluated the association between ghrelin isoforms (acylated and desacyl ghrelin) and TNF-α in obesity and obesity-associated type 2 diabetes, as well as the potential role of ghrelin in the control of apoptosis and autophagy in human adipocytes.

METHODS

Plasma concentrations of the ghrelin isoforms and TNF-α were measured in 194 participants. Ghrelin and ghrelin O-acyltransferase (GOAT) levels were analysed by western-blot, immunohistochemistry and real-time PCR in 53 biopsies of human omental adipose tissue. We also determined the effect of acylated and desacyl ghrelin (10 to 1,000 pmol/l) on TNF-α-induced apoptosis and autophagy-related molecules in omental adipocytes.

RESULTS

Circulating concentrations of acylated ghrelin and TNF-α were increased, whereas desacyl ghrelin levels were decreased in obesity-associated type 2 diabetes. Ghrelin and GOAT were produced in omental and subcutaneous adipose tissue. Visceral adipose tissue from obese patients with type 2 diabetes showed higher levels of GOAT, increased adipocyte apoptosis and increased expression of the autophagy-related genes ATG5, BECN1 and ATG7. In differentiating human omental adipocytes, incubation with acylated and desacyl ghrelin reduced TNF-α-induced activation of caspase-8 and caspase-3, and cell death. In addition, acylated ghrelin reduced the basal expression of the autophagy-related genes ATG5 and ATG7, while desacyl ghrelin inhibited the TNF-α-induced increase of ATG5, BECN1 and ATG7 expression.

CONCLUSIONS/INTERPRETATION

Apoptosis and autophagy are upregulated in human visceral adipose tissue of patients with type 2 diabetes. Acylated and desacyl ghrelin reduce TNF-α-induced apoptosis and autophagy in human visceral adipocytes.

Processed meat consumption and risk of cancer: a multisite case-control study in Uruguay

BACKGROUND

The role of processed meat in the aetiology of several cancers was explored in detail.

METHODS

In the time period 1996-2004, a multisite case-control study was conducted in Montevideo, Uruguay. The study included 6 060 participants (3 528 cases and 2 532 controls) corresponding to cancers of the oral cavity, pharynx, oesophagus, stomach, colon, rectum, larynx, lung, female breast, prostate, urinary bladder, and kidney (renal cell carcinoma only).

RESULTS

The highest odds ratios (ORs) were positively associated with cancers of the colon, rectum, stomach, oesophagus, and lung. With the exception of renal cell carcinoma, the remaining cancer sites were significantly associated with elevated risks for processed meat consumption. Furthermore, mortadella, salami, hot dog, ham, and salted meat were strongly associated with risk of several cancer sites.

CONCLUSION

It could be concluded that processed meat intake could be a powerful multiorgan carcinogen.

Recent improvements of the JET lithium beam diagnostic

A 60 kV neutral lithium diagnostic beam probes the edge plasma of JET for the measurement of electron density profiles. This paper describes recent enhancements of the diagnostic setup, new procedures for calibration and protection measures for the lithium ion gun during massive gas puffs for disruption mitigation. New light splitting optics allow in parallel beam emission measurements with a new double entrance slit CCD spectrometer (spectrally resolved) and a new interference filter avalanche photodiode camera (fast density and fluctuation studies).

Screening of biofilm formation by beneficial vaginal lactobacilli and influence of culture media components

AIMS

To assess the ability of vaginal lactobacilli to form biofilm under different culture conditions and to determine the relationship between their growth and the capability of biofilm formation by selected strains.

METHODS AND RESULTS

Fifteen Lactobacillus strains from human vagina were tested for biofilm formation by crystal violet staining. Only Lactobacillus rhamnosus Centro de Referencia para Lactobacilos Culture Collection (CRL) 1332, Lact. reuteri CRL 1324 and Lact. delbrueckii CRL 1510 were able to grow and form biofilm in culture media without Tween 80. However, Lact. gasseri CRL 1263 (a non-biofilm-forming strain) did not grow in these media. Scanning electron microscopy showed that Lact. rhamnosus CRL 1332 and Lact. reuteri CRL 1324 formed a highly structured biofilm, but only Lact. reuteri CRL 1324 showed a high amount of extracellular material in medium without Tween.

CONCLUSIONS

Biofilm formation was significantly influenced by the strain, culture medium, inoculum concentration, microbial growth and chemical nature of the support used for the assay.

SIGNIFICANCE AND IMPACTS OF THE STUDY

The results allow the selection of biofilm-forming vaginal Lactobacillus strains and the conditions and factors that affect this phenomenon.

Development of a diagnostic technique based on Cherenkov effect for measurements of fast electrons in fusion devices

A diagnostic technique based on the Cherenkov effect is proposed for detection and characterization of fast (super-thermal and runaway) electrons in fusion devices. The detectors of Cherenkov radiation have been specially designed for measurements in the ISTTOK tokamak. Properties of several materials have been studied to determine the most appropriate one to be used as a radiator of Cherenkov emission in the detector. This technique has enabled the detection of energetic electrons (70 keV and higher) and the determination of their spatial and temporal variations in the ISTTOK discharges. Measurement of hard x-ray emission has also been carried out in experiments for validation of the measuring capabilities of the Cherenkov-type detector and a high correlation was found between the data of both diagnostics. A reasonable agreement was found between experimental data and the results of numerical modeling of the runaway electron generation in ISTTOK.