101
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Harris W, Yin F, Cai J, Zhang Y, Ren L. WE-G-BRD-06: Volumetric Cine MRI (VC-MRI) Estimated Based On Prior Knowledge for On-Board Target Localization. Med Phys 2015. [DOI: 10.1118/1.4926062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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102
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Mao R, Zhang Y, Ren L, Tian L, Gao R, Ge H, Yin F. SU-E-T-293: Dosimetric Analysis of Microscopic Disease in SBRT for Lung Cancers. Med Phys 2015. [DOI: 10.1118/1.4924655] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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103
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Liang B, Liu B, Yin F, Zhou F, Wu Q. SU-E-T-690: Sensitivity Analysis to Machine Error: Comparisons of VMAT QA Systems. Med Phys 2015. [DOI: 10.1118/1.4925053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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104
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Yuan L, Ge Y, Sheng Y, Yin F, Wu QJ. MO-G-304-03: Development of Knowledge Models for IMRT Treatment Planning Utilizing a Rapid Learning Approach. Med Phys 2015. [DOI: 10.1118/1.4925474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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105
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Harris W, Zhang Y, Yin F, Ren L. TH-CD-303-06: Deformable Registration-Based Image Estimation Method for 4D CBCT Using Region-Based PCA. Med Phys 2015. [DOI: 10.1118/1.4926241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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106
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Zhang L, Zhang Y, Harris W, Yin F, Ren L. SU-E-J-26: A Novel Technique for Markerless Self-Sorted 4D-CBCT Using Patient Motion Modeling: A Feasibility Study. Med Phys 2015. [DOI: 10.1118/1.4924113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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107
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Cui T, Hu L, Miller W, Yin F, Cai J. TH-CD-204-09: Physiological Modeling of Lung Motion Based On Hyperpolarized Gas Tagging MRI. Med Phys 2015. [DOI: 10.1118/1.4926256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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108
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Zawisza I, Ren L, Yin F. TH-AB-303-02: An Investigation of Respiratory Signal Parameters for Multiple-Step Ahead Prediction of Surrogate Motion. Med Phys 2015. [DOI: 10.1118/1.4926157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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109
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Liu Y, Yin F, Czito B, Bashir M, Palta M, Zhong X, Dale B, Cai J. SU-F-303-13: Initial Evaluation of Four Dimensional Diffusion- Weighted MRI (4D-DWI) and Its Effect On Apparent Diffusion Coefficient (ADC) Measurement. Med Phys 2015. [DOI: 10.1118/1.4925240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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110
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Dang J, Yin F, You T, Dai C, Wang J. TH-CD-303-12: Sliding Motion Compensated Simultaneous 4D-CBCT Reconstruction. Med Phys 2015. [DOI: 10.1118/1.4926247] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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111
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Rodrigues A, Yin F, Wu Q. SU-E-T-344: Dynamic Electron Beam Therapy Using Multiple Apertures in a Single Cut-Out. Med Phys 2015. [DOI: 10.1118/1.4924705] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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112
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You T, Dang J, Dai C, Yin F. SU-E-T-347: Effect of MLC Leaf Position Inaccuracy On Dose Distribution for Spinal SBRT with Different Energies and Dose Rates. Med Phys 2015. [DOI: 10.1118/1.4924708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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113
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Zhang Y, Yin F, Mao R, Gao R, Ren L. WE-AB-303-01: FEATURED PRESENTATION: A Dual-Detector Phase-Matched Digital Tomosynthesis (DTS) Imaging Scheme Using Aggregated KV and MV Projections for Intra-Treatment Lung Tumor Tracking. Med Phys 2015. [DOI: 10.1118/1.4925866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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114
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Liang X, Liu Y, Yin F, Cai J. TH-CD-204-10: Probability-Driven Sorting Method for Reconstructing Variation-Independent 4D-MRI. Med Phys 2015. [DOI: 10.1118/1.4926257] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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115
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Adamson J, Chang Z, Cai J, Palta M, Horton J, Yin F, Blitzblau R. SU-E-J-223: A BOLD Contrast Imaging Sequence to Evaluate Oxygenation Changes Due to Breath Holding for Breast Radiotherapy: A Pilot Study. Med Phys 2015. [DOI: 10.1118/1.4924309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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116
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Stanhope C, Chang Z, Wang Z, Yin F, Kim G, Salama J, Kirkpatrick J, Adamson J. SU-E-T-613: Physics Considerations for Single-Isocenter Volumetric Modulated Arc Radiosurgery for Treatment of Multiple Intracranial Targets. Med Phys 2015. [DOI: 10.1118/1.4924976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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117
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Sheng Y, Li T, Yin F, Wu Q. SU-E-T-434: Fixed Margin Or Online Adaptation for Intermediate-Risk Prostate Stereotactic Body Radiation Therapy? A Dosimetric Study. Med Phys 2015. [DOI: 10.1118/1.4924795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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118
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Gao R, Wang H, Zhang Y, Mao R, Ren L, Yin F. SU-E-I-40: Phantom Research On Monochromatic Images Taken by Dual CBCT with Multiple Energy Sets. Med Phys 2015. [DOI: 10.1118/1.4924037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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119
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Gao J, Yin F, Liu M, Luo M, Qin C, Yang A, Yang S, Zhang Z, Shen Y, Lin H, Pan G. Identification and characterisation of tobacco microRNA transcriptome using high-throughput sequencing. PLANT BIOLOGY (STUTTGART, GERMANY) 2015; 17:591-8. [PMID: 25287651 DOI: 10.1111/plb.12275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2014] [Accepted: 09/26/2014] [Indexed: 05/09/2023]
Abstract
MicroRNAs (miRNAs) are post-transcriptional regulators that are involved in numerous biological processes in plants. In this study, we investigate miRNAs in Honghua Dajinyuan, an agronomically important species of tobacco in China. Here, we report a comprehensive analysis of miRNA expression profiles in the leaf, stem and root using a high-throughput sequencing approach. A total of 165 miRNAs, representing 55 conserved families, and 50 novel miRNAs, representing 19 families, were identified in three libraries. In addition, 12 miRNAs were randomly selected from a differentially expressed conserved miRNA family in three libraries with expression alterations and subjected to qRT-PCR validation. Of these, the expression level of nta-miR167d is highly enriched in the leaf tissue. In addition, the expression level of nta-miR319a is prominently enriched in the stem, while nta-miR160c is highly enriched in the root. Moreover, the target prediction showed that most of the targets coded for transcription factors that are involved in cellular and metabolic processes. GO analysis showed that most of the targets were involved in organelle function, served binding functions, and take part in cellular and metabolic processes. This study helps shed new light on understanding the role of miRNAs in different parts of the tobacco plant and adds a significant number of novel miRNAs to the tobacco miRNA transcriptome.
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120
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Ma M, Luo S, Chen X, Yuan F, Cai J, Lu L, Yin F. Immune System-Related Differentially Expressed Genes, Transcription Factors and microRNAs in Post-Menopausal Females with Osteopenia. Scand J Immunol 2015; 81:214-20. [PMID: 25565391 DOI: 10.1111/sji.12266] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2014] [Accepted: 12/14/2014] [Indexed: 11/30/2022]
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121
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Wang Z, Yang XR, Song H, Cao BR, Yin F, An ZM, Kang L, Li J. Immune Function Alterations during 12 Weeks of Abstinence in Heroin Users. Folia Biol (Praha) 2015; 61:241-246. [PMID: 26789146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The intent of the study was to evaluate immune system changes during 12 weeks of abstinence in heroin users. We recruited men (N = 65) aged 18-45 years and collected demographic and heroin use pattern data. Serum blood levels of total interleukin 2 (IL-2), interferon γ (IFN-γ), immunoglobulin (Ig) A, IgG, and IgM were assessed at five time points. The IL-2 level was increased on day 84 as compared to that in healthy controls. The IFN-γ level was higher in heroin users than in healthy controls between days 0 and 28, and was decreased on day 84. IgG and IgM levels in heroin users were higher than those in healthy controls in our 12-week study, and were in positive correlation with the way of using the drug, duration of heroin dependence, and daily heroin intake. Our data revealed that the immune system was not restored during the 12 weeks of heroin withdrawal.
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122
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Hu Z, Lin Q, Chen H, Li Z, Yin F, Feng X. Identification of a novel cytochrome P450 gene, CYP321E1 from the diamondback moth, Plutella xylostella (L.) and RNA interference to evaluate its role in chlorantraniliprole resistance. BULLETIN OF ENTOMOLOGICAL RESEARCH 2014; 104:716-23. [PMID: 25208571 DOI: 10.1017/s0007485314000510] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Insect cytochrome P450 monooxygenases (P450s) play an important role in catalysis of many reactions leading to insecticides resistance. Our previous studies on transcriptome analysis of chlorantraniliprole-resistant development in the diamondback moth, Plutella xylostella revealed that up-regulation of cytochrome P450s are one of the main factors leading to the development of chlorantraniliprole resistance. Here, we report for the first time a novel cytochrome P450 gene CYP321E1, which belongs to the cytochrome P450 gene family CYP321. Real-time quantitative PCR (RT-qPCR) analyses indicated that CYP321E1 was expressed at all developmental stages of P. xylostella but was highest in the fourth-instar larvae; furthermore, the relatively high expression was observed in the midgut of the fourth-instar larvae, followed by fat bodies and epidermis. The expression of CYP321E1 in P. xylostella was differentially affected by three representative insecticides, including alphamethrin, abamectin and chlorantraniliprole. Among them, the exposure to chlorantraniliprole resulted in the largest transcript level of this cytochrome P450 gene. The findings suggested potential involvement of CYP321E1 in chlorantraniliprole resistance of P. xylostella. To assess the functional link of CYP321E1 to chlorantraniliprole resistance, RNA interference (RNAi)-mediated gene silencing by double stranded RNA (dsRNA) injecting was used. Results revealed that injection delivery of dsRNA can greatly reduce gene expression after 24 h. As a consequence of RNAi, a significant increment in mortality of larvae injected CYP321E1 dsRNA was observed after 24 h of exposure to chlorantraniliprole. These results strongly support our notion that this novel cytochrome P450 gene plays an important role in chlorantraniliprole detoxification in the diamondback moth and is partly responsible for its resistance.
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123
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Liu Y, Yin F, Czito B, Mustafa B, Cai J. Four-Dimensional Diffusion-Weighted Magnetic Resonance Imaging (4D-DWI): Development and Evaluation. Int J Radiat Oncol Biol Phys 2014. [DOI: 10.1016/j.ijrobp.2014.08.146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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124
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Wang C, Horton J, Yin F, Chang Z. Early Stage Breast Cancer Radiation Treatment Assessment Using Diffusion Weighted MRI and Dynamic Contrast Enhanced MRI. Int J Radiat Oncol Biol Phys 2014. [DOI: 10.1016/j.ijrobp.2014.05.166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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125
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Liu Y, Yin F, Czito B, Mustafa B, Cai J. Four-Dimensional Diffusion-Weighted MR Imaging (4D-DWI): Development and Evaluation. Int J Radiat Oncol Biol Phys 2014. [DOI: 10.1016/j.ijrobp.2014.05.498] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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