Permutation-information-theory approach to unveil delay dynamics from time-series analysis

In this paper an approach to identify delay phenomena from time series is developed. We show that it is possible to perform a reliable time delay identification by using quantifiers derived from information theory, more precisely, permutation entropy and permutation statistical complexity. These quantifiers show clear extrema when the embedding delay τ of the symbolic reconstruction matches the characteristic time delay τ(S) of the system. Numerical data originating from a time delay system based on the well-known Mackey-Glass equations operating in the chaotic regime were used as test beds. We show that our method is straightforward to apply and robust to additive observational and dynamical noise. Moreover, we find that the identification of the time delay is even more efficient in a noise environment. Our permutation approach is also able to recover the time delay in systems with low feedback rate or high nonlinearity.

Stimulation of syncytium formation in vitro in human trophoblast cells by galectin-1

BACKGROUND

Galectin-1 (gal-1), a member of the mammalian beta-galactoside-binding proteins, exerts biological effects by recognition of glycan ligands, including those involved in cell adhesion and growth regulation. In trophoblast cells, gal-1 binds to cell surface glycoproteins (e.g., Mucin1). It has been demonstrated that gal-1 recognizes appropriate glycotopes on the syncytiotrophoblast and extravillous trophoblast from second trimester human placenta and choriocarcinoma cells BeWo, which reveal two coexisting phenotypes, the cytotrophoblast-like and the syncytiotrophoblast-like phenotype. So the aim of this study was to investigate the effect of gal-1 on syncytium formation in BeWo and human villous trophoblasts (HVT) cells.

MATERIALS AND METHODS

The effect of gal-1 on syncytium formation was investigated with immunocytochemical and double immunofluorescence stainings, cell-labelling and Real-time RT-PCR. BeWo choriocarcinoma and HVT cells were incubated in vitro for 24 and 48 h in the absence (controls) and presence of gal-1 and forskolin and stained with antibodies against Ki67, beta-catenin, E-cadherin and syncytin. BeWo and HVT cells were incubated with 60 microg/ml gal-1 for 48 h (BeWo) or 96 h (HVT) and cell fusion was detected by fluorescent cell-labelling solution. Finally, BeWo cells were incubated for 1 h or 48 h in the absence and presence of 60 microg/ml gal-1 and Real-time RT-PCR was performed.

RESULTS

We showed with immunocytochemical staining a downregulation of beta-catenin expression in the 24 h BeWo cell culture and with double immunofluorescence staining an inhibition of the beta-catenin and E-cadherin expression in the 48 h BeWo cell culture stimulated with gal-1 or forskolin. The inhibition of E-cadherin was demonstrated on mRNA level in the 1 h BeWo cell culture too. Increased cell fusion was also showed with DiO and DiI fluorescent cell-labelling solution in the 48 h BeWo cell culture. In addition, we demonstrated the downregulation of Ki67 protein expression in the 24 h BeWo cell culture and on mRNA level in the 1 h BeWo cell culture. We also showed the upregulation of syncytin protein and mRNA expression after incubation of the 48 h BeWo cell culture with gal-1 or forskolin. Similar results were obtained with HVT cells: the amount of cell fusion was significantly increased in the gal-1 treated 48 h HVT cell culture in vitro compared to untreated cells as demonstrated with beta-catenin and E-cadherin double immunofluorescence staining. This increase was also shown by fluorescent cell-labelling with DiO and DiI in the 96 h HVT cell culture compared to untreated cells.

CONCLUSION

Our data suggest that gal-1 stimulates the syncytium formation in choriocarcinoma cells BeWo and HVT cells in vitro and inhibits the expression of beta-catenin, E-cadherin and in addition Ki67 in BeWo cells. Therefore gal-1 may be a major trigger for the process of trophoblast cell fusion.

Inhibiton of RET and JAK2 signals and upregulation of VEGFR3 phosphorylation in vitro by galectin-1 in trophoblast tumor cells BeWo

BACKGROUND

Galectin-1 (gal-1), a member of the mammalian beta-galactoside-binding proteins, binds to cell surface glycoproteins (Mucin-1) on trophoblast cells. Although it has been demonstrated that gal-1 induces cell differentiation processes in these cells, no information on its signal transduction processes is available so far. As tyrosine phosphorylation is a major mechanism that controls multiple biological processes including cell differentiation, survival and proliferation, the aim of this study was to examine which human receptor tyrosine kinases (RTKs) were phosphorylated in trophoblast cells by gal-1.

MATERIALS AND METHODS

BeWo choriocarcinoma cells were incubated for 24h in the absence (controls) and presence of 60microg/ml galectin-1. With the RayBio Human RTK Phosphorylation Antibody Array 1, the relative levels of phosphorylation of different human RTKs could be detected simultaneously. The signal intensities were compared and quantified with the Quantity One Version 4.5.2 program. Gal-1-treated and non-treated cells were incubated with antibodies against REarranged during Transfection (RET) and phosphorylated RET(Y905). Staining reaction was performed with the avidin-biotinylated peroxidase complex (ABC) reagent.

RESULTS

We demonstrated that gal-1 inhibited RET and Janus Kinase 2 (JAK2) signals and upregulated Vascular endothelial growth factor receptor 3 (VEGFR3) signal in BeWo cells. We also showed the downregulation of phosphorylation on RET phosphotyrosine residue 905 in BeWo cells with phosphorylation specific antibodies and immunocytochemistry.

CONCLUSION

Out of a number of 71 different RTKs, the stimulation of BeWo cells with gal-1 showed a significant alteration of signal intensity in only 3 RTKs: JAK2, RET and VEGFR3. Our data suggest that phosphorylation of these RTKs could be involved in cell differentiation processes that could be responsible for the already known effect of gal-1 on BeWo cells, the inhibition of proliferation.

Bubbling in delay-coupled lasers

We theoretically study chaos synchronization of two lasers which are delay coupled via an active or a passive relay. While the lasers are synchronized, their dynamics is identical to a single laser with delayed feedback for a passive relay and identical to two delay-coupled lasers for an active relay. Depending on the coupling parameters the system exhibits bubbling, i.e., noise-induced desynchronization, or on-off intermittency. We associate the desynchronization dynamics in the coherence collapse and low-frequency fluctuation regimes with the transverse instability of some of the compound cavity's antimodes. Finally, we demonstrate how, by using an active relay, bubbling can be suppressed.

Safety of two cluster schedules for subcutaneous immunotherapy in allergic rhinitis or asthma patients sensitized to inhalant allergens

BACKGROUND

Subcutaneous immunotherapy (SCIT) usually requires a long titration phase, which can be associated with various adverse events (AEs).

OBJECTIVES

It was the aim of this study to determine the safety of 2 cluster regimens for SCIT in patients with allergic rhinitis, with or without mild or moderate allergic asthma, who were sensitized to grass and/or tree pollen, or house dust mites (HDM).

PATIENTS AND METHODS

Adult patients were included in a European, open-label, prospective trial. Pollen-allergic patients received grass pollen, grass and olive pollen, or hazel, alder and birch pollen according to a 3-week titration cluster. HDM-allergic patients received HDM extract according to a 2-week titration cluster. The safety of the titration phase was assessed in terms of local and systemic AEs.

RESULTS

The safety analysis included 157 patients: 110 received pollen and 47 HDM extract. During the cluster titration, 248 AE episodes were reported in the pollen group and 113 in the HDM group; these were mainly local reactions. Around one third of patients (30.9% pollen and 38.3% HDM) did not experience any AE. In most cases (67.1% of pollen and 71.1% of HDM patients), AEs did not lead to a change in titration schedule. No anaphylactic reaction or other serious life-threatening systemic AEs were reported. Only 2 patients in the HDM group discontinued treatment because of AEs.

CONCLUSIONS

Rapid cluster titration was well tolerated in adults with allergic rhinitis, with or without mild to moderate allergic asthma, due to pollen or HDM. This short-titration, high-dose cluster regime may allow better patient compliance and cost savings.

Synchronization properties of three delay-coupled semiconductor lasers

We present detailed numerical studies of the dynamics of three semiconductor lasers when interacting in a linear chain through the mutual injection of their optical fields. In particular, we focus on the synchronization properties of the coupling-induced dynamics and the role of the delay in the interaction between the lasers. The recently experimentally and numerically demonstrated zero-lag synchronization [Fischer, Phys. Rev. Lett. 97, 123902 (2006)] between the outer lasers in the chain is here further analyzed in detail along with a study of the robustness of this phenomenon. In addition, the propagation properties of perturbing pulses and of harmonic modulation are discussed.

Ki67 index in intracranial ependymoma: a promising histopathological candidate biomarker

AIMS

The Ki67 tumour cell proliferation index is an independent prognostic factor in ependymoma patients. Essential prerequisites for validation of the Ki67 index as a histopathological biomarker are the reproducibility of this factor and its prognostic influence by different observers (proof of objective clinical and analytical performance). To this end, the aim was to analyse systematically inter- and intraobserver agreement and reproducibility of the prognostic impact of the Ki67 index in intracranial ependymoma.

METHODS AND RESULTS

The study cohort contained 78 cases of intracranial ependymoma. In all cases, the Ki67 index was assessed by four experienced observers (EOs) and by four inexperienced observers (IOs) using the manual hot-spot method. There was considerable agreement on Ki67 index assessment. There was higher observer agreement among EOs compared with IOs. For each observer, survival analysis showed significant association of low Ki67 index with favourable patient outcome.

CONCLUSIONS

Our data show that the Ki67 index in intracranial ependymoma is a reproducible and robust prognostic factor and can be considered a promising histopathological candidate biomarker. Attainment of biomarker status requires further translational studies in the context of prospective therapeutic trials.

Synchronization properties of network motifs: influence of coupling delay and symmetry

We investigate the effect of coupling delays on the synchronization properties of several network motifs. In particular, we analyze the synchronization patterns of unidirectionally coupled rings, bidirectionally coupled rings, and open chains of Kuramoto oscillators. Our approach includes an analytical and semianalytical study of the existence and stability of different in-phase and out-of-phase periodic solutions, complemented by numerical simulations. The delay is found to act differently on networks possessing different symmetries. While for the unidirectionally coupled ring the coupling delay is mainly observed to induce multistability, its effect on bidirectionally coupled rings is to enhance the most symmetric solution. We also study the influence of feedback and conclude that it also promotes the in-phase solution of the coupled oscillators. We finally discuss the relation between our theoretical results on delay-coupled Kuramoto oscillators and the synchronization properties of networks consisting of real-world delay-coupled oscillators, such as semiconductor laser arrays and neuronal circuits.

Dynamics, correlation scaling, and synchronization behavior in rings of delay-coupled oscillators

We study the dynamics of unidirectionally delay-coupled nonlinear oscillators. Cascading them within a ring of fixed total propagation delay, we demonstrate simple scaling behavior of correlation properties. In fact, the correlation properties of a ring with N elements can be deduced from the autocorrelation of the single delayed feedback system. Coupling a ring element to a chain of unidirectionally coupled identical oscillators, we achieve complete synchronization between elements of chain and ring, evidencing generalized synchronization among the other elements, even if uncorrelated.

Evolution from modal to spatially incoherent emission of a broad-area VCSEL

Broad-area vertical-cavity surface-emitting lasers (BA-VCSELs) can exhibit a state of spatially incoherent emission, as we recently reported in [M. Peeters et al., Opt. Express, 13, 9337 (2005)]. Here, we experimentally study the evolution of a BA-VCSEL under pulsed operation from well-defined modal emission with a multitude of transverse cavity modes to such spatially incoherent emission. The transition is studied using a high-speed intensified CCD camera and differential image analysis with which single-shot measurements of the imaged nearfield, farfield, spatial coherence, and spectral emission properties are acquired. This combination of experimental characterization tools allows for a detailed description of the BA-VCSEL's emission behavior, which is necessary for an in-depth understanding of the processes involved. We find the interplay between the thermal chirp and the build-up of a spatially distributed thermal lens to be decisive for the break-up of the global cavity modes.

Choriocarcinoma with Metastasis in a Rabbit (Oryctolagus cuniculi)

A 3-year-old female rabbit ( Oryctolagus cuniculi) presented with apathy and indisposition for 2–3 days. Palpation revealed a mass in the caudal abdomen, namely, in the wall of the uterus. Ovariohysterectomy was performed, and the tissues were submitted for histopathologic examination. The mass consisted of 3 different (trophoblastic, syncytiotrophoblastic, and cytotrophoblastic) neoplastic cell types originating from the uterus. Immunohistochemistry was positive for cytokeratin in all 3 neoplastic cell types, and the syncytiotrophoblasts were positive also for human chorionic gonadotropin. Together these features allow the diagnosis choriocarcinoma. This report documents the first case of a spontaneous choriocarcinoma in a rabbit.

Versatile and robust chaos synchronization phenomena imposed by delayed shared feedback coupling

In a joint experimental and modeling approach we demonstrate chaos synchronization imposed by a delayed shared feedback coupling between two nonlinear electro-optic oscillators. Robust identical synchronization is obtained for both symmetric and strongly asymmetric timing of the mutual coupling, offering great potential for applications such as chaos-based communications. We further demonstrate antisynchronization as well as generalized synchronization with vanishing linear correlation, by detuning the nonlinearity in one of the oscillators.

Photodissociation dynamics of the 2-propyl radical, C3H7

The photodissociation of 2-propyl leading to propene+H was investigated with nanosecond time resolution. A supersonic beam of isolated 2-propyl radicals was produced by pyrolysis of 2-bromopopane. The kinetic energy release of the H-atom photofragment was monitored as a function of excitation wavelength by photofragment Doppler spectroscopy via the Lyman-alpha transition. The loss of hydrogen atoms after excitation proceeds in alpha position to the radical center with a rate constant of 5.8x10(7) s-1 at 254 nm. Approximately 20% of the excess energy is deposited as translation in the H-atom photofragment. In contrast 1-propyl does not lose H atoms to a significant extent. The experimental results are compared to simple Rice-Ramsperger-Kassel-Marcus calculations. The possible reaction pathways are examined in hybrid density functional theory calculations.

Femtosecond Dynamics of the tert-Butyl Radical, t-C4H9

The excited-state dynamics of the tert-butyl radical, t-C4H9, was investigated by femtosecond time-resolved photoionization and photoelectron spectroscopy. The experiments were supported by ab initio calculations. tert-Butyl radicals, generated by flash pyrolysis of azo-tert-butane, were excited into the A 2A1 (3s) state between 347 and 307 nm and the 3p band at 274 and 268 nm and ionized by 810-nm radiation, in a [1 + 2'] or [1 + 3'] process. Electronic structure calculations confirm that the two states are of s and p Rydberg characters, respectively. The carbon framework becomes planar and thus ion-like in both states. The photoelectron spectra are broad and seem to be mediated by accidental intermediate resonances in the probe step. All time-resolved photoelectron spectra can be described by a single decay time. For the A 2A1 state, lifetimes between 180 and 69 fs were measured. Surprisingly, a much longer lifetime of around 2 ps was found for the 3p state. To understand the decay dynamics, the potential energy was computed as a function of several important nuclear coordinates. A [1,2] H-atom shift to the isobutyl radical seems not to be important for the excited-state dynamics. Qualitative considerations indicate curve crossings between the ground state, the 3s state, and a valence state along the asymmetric C-C stretch coordinate that correlates to the dimethylcarbene + methyl product channel. The implications of the present study for earlier work on the nanosecond time scale are discussed.

Simultaneous bidirectional message transmission in a chaos-based communication scheme

We introduce a chaos-based communication scheme allowing for bidirectional exchange of information. Coupling [corrected] two semiconductor lasers through a partially transparent optical mirror, placed in the pathway connecting the lasers [corrected] delay dynamics is induced in both lasers. We numerically demonstrate that this dynamics can be identically synchronized, and moreover, information introduced on both ends of the link can be simultaneously transmitted. This scheme allows one to negotiate a key through a public channel.

Long-term fate of neural precursor cells following transplantation into developing and adult CNS

Successful strategies for transplantation of neural precursor cells for replacement of lost or dysfunctional CNS cells require long-term survival of grafted cells and integration with the host system, potentially for the life of the recipient. It is also important to demonstrate that transplants do not result in adverse outcomes. Few studies have examined the long-term properties of transplanted neural precursor cells in the CNS, particularly in non-neurogenic regions of the adult. The aim of the present study was to extensively characterize the fate of defined populations of neural precursor cells following transplantation into the developing and adult CNS (brain and spinal cord) for up to 15 months, including integration of graft-derived neurons with the host. Specifically, we employed neuronal-restricted precursors and glial-restricted precursors, which represent neural precursor cells with lineage restrictions for neuronal and glial fate, respectively. Transplanted cells were prepared from embryonic day-13.5 fetal spinal cord of transgenic donor rats that express the marker gene human placental alkaline phosphatase to achieve stable and reliable graft tracking. We found that in both developing and adult CNS grafted cells showed long-term survival, morphological maturation, extensive distribution and differentiation into all mature CNS cell types (neurons, astrocytes and oligodendrocytes). Graft-derived neurons also formed synapses, as identified by electron microscopy, suggesting that transplanted neural precursor cells integrated with adult CNS. Furthermore, grafts did not result in any apparent deleterious outcomes. We did not detect tumor formation, cells did not localize to unwanted locations and no pronounced immune response was present at the graft sites. The long-term stability of neuronal-restricted precursors and glial-restricted precursors and the lack of adverse effects suggest that transplantation of lineage-restricted neural precursor cells can serve as an effective and safe replacement therapy for CNS injury and degeneration.

The reliability of isokinetic and isometric leg strength measures among individuals with symptoms of mild osteoarthritis

AIM

The aim of the study is to evaluate the test-retest reliability of measures of isokinetic and isometric leg strength and joint function among individuals exhibiting symptoms of mild osteoarthritis. Reliable procedures are needed to assess the effectiveness of an intervention on osteoarthritic symptoms.

METHODS

Test-retest reliability of two leg strength protocols was assessed using the intraclass correlation coefficient (R). Testing was completed on two occasions separated by 7 days. Eighteen subjects (9 male and 9 female; 54.1+/-11 years) completed an isokinetic testing trial, which consisted of a set of 5 maximal repetitions of the quadriceps and hamstrings at 60 deg/s followed by a set of 15 maximal contractions at 180 deg/s with a 2-min rest between sets and an isometric testing trial, which consist of 3 maximal contractions of the quadriceps for 6 s with a 30-s rest between contractions at 30, 45, and 80 degrees of knee flexion for a total of 9 isometric contractions. A 90-s rest occurred between angles.

RESULTS

Most of the isokinetic variables showed moderate to high intraclass reliability (ICC). Two of the calculated isokinetic variables (work fatigue at 180 degrees /s for extension and for flexion) showed low intraclass reliability (ICC=0.78, resp. ICC=0.6). All calculated ICC values of the isometric variables were moderate to high.

CONCLUSIONS

Test-retest reliability of isokinetic and isometric leg strength was high, allowing the intervention protocol to monitor changes in leg strength and joint function among those exhibiting symptoms of mild osteoarthritis.

Effects of two diets on the haematology, plasma chemistry and intestinal flora of budgerigars (Melopsittacus undulatus )

Two groups of 22 budgerigars (Melopsittacus undulatus) were housed for 12 months under identical conditions. One group was fed a commercial seed mixture plus carrots and a mineral supplement, and the other group was fed a commercially formulated diet plus carrots. Samples of blood and faeces were collected initially and after three, six, nine and 12 months. There were no significant differences between the haematological values of the two groups. The group fed the seed mixture had significantly higher concentrations of glucose, albumin, triglycerides and uric acid, and higher activity of aspartate aminotransferase, but the values were within the published reference ranges for normal birds. There were no significant differences between the faecal samples from the two groups, except that the fungus Macrorhabdus ornithogaster was identified in 48.3 per cent of the samples from the group fed the commercially formulated diet but from only 3.4 per cent of the samples from the group fed the seed mixture.

Zero-lag long-range synchronization via dynamical relaying

We show that isochronous synchronization between two delay-coupled oscillators can be achieved by relaying the dynamics via a third mediating element, which surprisingly lags behind the synchronized outer elements. The zero-lag synchronization thus obtained is robust over a considerable parameter range. We substantiate our claims with experimental and numerical evidence of such synchronization solutions in a chain of three coupled semiconductor lasers with long interelement coupling delays. The generality of the mechanism is validated in a neuronal model with the same coupling architecture. Thus, our results show that zero-lag synchronized chaotic dynamical states can occur over long distances through relaying, without restriction by the amount of delay.

Chronic regurgitation in a cockatiel (Nymphicus hollandicus) with a trichobezoar

Crop disorders are very common in small psittacine birds. Psittacine birds are very curious and like chewing on different materials. Therefore, they are predisposed to ingest foreign material. In the literature only very few cases have been reported. This case report describes the clinical examination, the diagnostic workup and the ingluviotomy in a cockatiel with a bezoar in the crop.

MR imaging of lineage-restricted neural precursors following transplantation into the adult spinal cord

Neural precursor cell (NPC) transplantation is a promising strategy for treatment of CNS injuries and neurodegenerative disorders because of potential for cell replacement. An important element of future clinical applications is development of a non-invasive procedure to follow NPC fate. We show that neuronal-restricted precursors (NRPs) and glial-restricted precursors (GRPs), NPCs with lineage restrictions for neurons and glia, respectively, can be labeled in vitro with the superparamagnetic iron oxide contrast agent Feridex. Following engraftment into intact adult spinal cord, labeled cells robustly survived in white and gray matter and migrated selectively along white matter tracts up to 5 mm. Localization of cells was reliably established using ex vivo magnetic resonance imaging of spinal cords. Imaging coincided with histological detection of iron and the human alkaline phosphatase transgene in most grafting sites, including the stream of migrating cells. Following transplantation, magnetically labeled cells exhibited mature morphologies and differentiated into neurons, astrocytes, and oligodendrocytes, similar to grafts of unlabeled NRPs and GRPs. Interestingly, Feridex-labeled cells, but not unlabeled cells, induced influx of ED1-positive macrophages/microglia. Small numbers of these phagocytic cells took up iron from grafted cells, while the majority of Feridex label was found in transplanted cells. We conclude that Feridex labeling does not inhibit NPC differentiation and can be used to reliably localize NPCs by MRI following engraftment into adult CNS, with the possible exception of areas of rapidly proliferating cells. The present results are relevant for MR-guided clinical application of transplantation strategies in treatment of spinal cord injury and other CNS pathologies.

Excited Mixed-Valence States of Symmetrical Donor−Acceptor−Donor π Systems

We investigated the spectroscopic properties of a series of four bistriarylamine donor-pi-bridge-donor D-pi-D compounds (dimers), composed of two asymmetric triarylamine chromophores (monomers). UV/vis, fluorescence, and transient absorption spectra were recorded and compared with those of the corresponding D-pi monomers. Bilinear Lippert-Mataga plots indicate a major molecular reorganization of the excited state in polar media for all compounds. The excited states of the dimers are described as mixed-valence states that show, depending on the chemical nature of the pi bridge, a varying amount of interactions (couplings). We found that superradiant emission, that is, an enhancement of the fluorescence rate in the dimer, is observed only in the case of weak and medium coupling. Whether the first excited-state potential energy surface of the dimers is described by single minimum or a double minimum potential depends on the solvent polarity and the electronic coupling. In the latter case, the dimer relaxes in a symmetry broken CT state with partial positive charge at the triarylamine donor and negative charge at the pi bridge. The [2.2]paracyclophane bridged dimer is an example of a weakly coupled system because the spectroscopic behavior is very similar to the corresponding p-xylene monomer. In contrast, anthracene as well as p-xylene bridges mediate a stronger coupling and reveal a significant cooperative influence on the optical properties.

Photodissociation of thymine

We discuss the photochemistry and photodissociation dynamics of thymine as revealed by two-colour photofragment Doppler spectroscopy and by one-colour slice imaging. Thymine is optically excited into the pipi* state, known to deactivate quickly. The H atom photofragment spectra are dominated by two-photon excitation processes with subsequent statistical dissociation. This can be explained by absorption of a second photon from a long-lived dark state to a highly excited state that quickly deactivates to the electronic ground state. No evidence was found for an important role of the pisigma* excited state identified in adenine and many other heterocyclic molecules.

Episodic synchronization via dynamic injection

We report the occurrence of spontaneous synchronizing events between two semiconductor lasers, when the emission of a frequency- and intensity-chaotic driving laser is unidirectionally coupled into a second stable response laser. The driving laser is driven chaotic by delayed optical feedback, the response laser is a device-identical solitary laser. We demonstrate the onset of an episodic synchronization regime when the two lasers are spectrally detuned with respect to each other. By a joint experimental and modeling analysis we can attribute the onset and the duration of the episodes to properties of spectral overlap of both lasers. This effect can even give rise to seemingly anticorrelated intensity behavior. We expect episodic synchronization to be a generic scenario for the loss of synchronization of chaotic oscillators exhibiting frequency cycles.