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Hlushchuk Y, Kohler A, Bauch S, Sirko L, Blumel R, Barth M, Stockmann H. Autocorrelation function of level velocities for ray-splitting billiards. PHYSICAL REVIEW. E, STATISTICAL PHYSICS, PLASMAS, FLUIDS, AND RELATED INTERDISCIPLINARY TOPICS 2000; 61:366-370. [PMID: 11046274 DOI: 10.1103/physreve.61.366] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/1998] [Revised: 03/12/1999] [Indexed: 05/23/2023]
Abstract
We study experimentally and theoretically the autocorrelation function of level velocities c(x) and the generalized conductance C(0) for classically chaotic ray-splitting systems. Experimentally, a Sinai ray-splitting billiard was simulated by a thin microwave rectangular cavity with a quarter-circle Teflon insert. For the theoretical estimates of the autocorrelator c(x) and the conductance C(0) we made parameter-dependent quantum calculations of eigenenergies of an annular ray-splitting billiard. Our experimental and numerical results are compared to theoretical predictions of systems based on the Gaussian orthogonal ensemble in random matrix theory.
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Seba P, Kuhl U, Barth M, Stöckmann HJ. Experimental verification of topologically induced vortices inside a billiard. ACTA ACUST UNITED AC 1999. [DOI: 10.1088/0305-4470/32/47/302] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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103
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Barth M, Metzler A, Klarhöfer M, Röll S, Moser E, Leibfritz D. Functional MRI of the human motor cortex using single-shot, multiple gradient-echo spiral imaging. Magn Reson Imaging 1999; 17:1239-43. [PMID: 10576708 DOI: 10.1016/s0730-725x(99)00087-9] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
In this study, we combined the advantages of a fast multi-slice spiral imaging approach with a multiple gradient-echo sampling scheme at high magnetic field strength to improve quantification of BOLD and inflow effects and to estimate T2* relaxation times in functional brain imaging. Eight echoes are collected with echo time (TE) ranging from 5 to 180 ms. Acquisition time per slice and echo time is 25 ms for a nominal resolution of 4 x 4 x 4 mm3. Evaluation of parameter images during rest and stimulation yields no significant activation on the inflow sensitive spin-density images (rho or I0-maps) whereas clear activation patterns in primary human motor cortex (M1) and supplementary motor area (SMA) are detected on BOLD sensitive T2*-maps. The calculation of relaxation times and rates of the activated areas over all subjects yields an average T2* +/- standard deviation (SD) of 46.1+/-4.5 ms (R2* of 21.8+/-2.2 s(-1)) and an average increase (deltaT2* +/- SD) of 0.93+/-0.47 ms (deltaR2* of -0.4+/-0.14 s(-1)). Our findings demonstrate the usefulness of a multiple gradient echo data acquisition approach in separating various vascular contributions to brain activation in fMRI.
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Bowden ET, Barth M, Thomas D, Glazer RI, Mueller SC. An invasion-related complex of cortactin, paxillin and PKCmu associates with invadopodia at sites of extracellular matrix degradation. Oncogene 1999; 18:4440-9. [PMID: 10442635 DOI: 10.1038/sj.onc.1202827] [Citation(s) in RCA: 300] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Invasive breast cancer cells have the ability to extend membrane protrusions, invadopodia, into the extracellular matrix (ECM). These structures are associated with sites of active matrix degradation. The amount of matrix degradation associated with the activity of these membrane protrusions has been shown to directly correlate with invasive potential. We demonstrate here that microinjection of polyclonal anti-cortactin antibodies blocks matrix degradation at invadopodia supporting the hypothesis that cortactin has a direct role in invasive behavior. MDA-MB-231, invasive breast cancer cells were sheared from the surface of a gelatin matrix to isolate invadopodia. Cortactin, paxillin and protein kinase C (PKC) mu, a serine kinase, were co-immunoprecipitated as a complex from invadopodia-enriched membranes. We confirmed the subcellular distribution of these proteins by immunolocalization and Western blotting. We also determined that, in contrast to its presence in invasive cells, this complex of proteins was not detected in lysates from non-invasive cells that do not form invadopodia. Taken together, these data suggest that the formation of this cortactin-containing complex correlates with cellular invasiveness. We hypothesize that this complex of molecules has a role in the formation and function of invadopodia during cellular invasion.
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105
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Barth M, Reichenbach JR, Venkatesan R, Moser E, Haacke EM. High-resolution, multiple gradient-echo functional MRI at 1.5 T. Magn Reson Imaging 1999; 17:321-9. [PMID: 10195575 DOI: 10.1016/s0730-725x(98)00191-x] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A multiple gradient echo, high resolution imaging method is proposed to better visualize different sources of activation in functional magnetic resonance imaging (fMRI) experiments. Eight echoes are collected from 30 ms to 205 ms with an echo spacing of 25 ms. All echoes show significant activation, but each echo reveals its own pattern of activation. From this variability, it appears that large vessel contributions can be separated from small vessel contributions using a fuzzy cluster analysis across echo times. The results demonstrate the importance of a multiple gradient echo data acquisition approach in localizing various vascular contributions to brain activation in fMRI.
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106
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Barth M. Experience-dependent development of the adult optic lobe and central brain in Drosophila melanogaster. ROSSIISKII FIZIOLOGICHESKII ZHURNAL IMENI I.M. SECHENOVA 1999; 85:184-94. [PMID: 10389175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/13/2023]
Abstract
The optic lobes, mushroom bodies (MB) and central complex (CC) of Drosophila melanogaster were investigated in order to find out whether rearing in different light regimes affect their size. Flies raised in constant light up for up to four days post eclosion had a lamina that was about 30% larger than in flies kept in constant darkness. A volume difference between light- and dark-reared flies could also be observed for the lobula plate, the MBs, and the CC. When the flies were kept in the dark for the first 12 hours of their adult life and then brought back to constant light for the next 3.5 days, the lamina was as small as the laminae of flies raised for four days in constant darkness. This finding suggests a critical period for lamina development during day one of the imago. Mutant studies suggest that the molecular mechanisms underlying this experience-dependent development might be quite diverse. For example, the structural plasticity of the mushroom bodies is abolished in the dunce mutation, whereas the light-dependent growth of the lamina is not. Finally, studies of optomotor behavior indicate an adaptational role for the structural plasticity in the optic lobe. Surprisingly, dark-reared flies see better under low light conditions than their light-reared counterparts. This suggests that a small lamina is not a bad lamina in the sense that dark-reared animals see worse. They rather adapt to the specific light-conditions they were growing up in.
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Görlach C, Sirén AL, Knerlich F, Feger G, Fricke A, Barth M, Schilling L, Ehrenreich H, Wahl M. Delayed loss of ETB receptor-mediated vasorelaxation after cold lesion of the rat parietal cortex. J Cereb Blood Flow Metab 1998; 18:1357-64. [PMID: 9850148 DOI: 10.1097/00004647-199812000-00010] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
The aim of this study was to investigate the involvement of endothelins (ET) in brain injury. The effect of ET was studied in the isolated basilar artery (BA) taken from control, sham-operated, and cold-lesioned rats. Cold lesion was induced by application of a precooled (-78 degrees C) copper cylinder (outer diameter 5 mm) for 60 seconds to the intact dura over the parietal cortex. After precontraction with prostaglandin (PG) F2alpha, ET-3 (10(-10) to 10(-8) mol/L) dilated BA with a pD2 (negative log of the half-maximal concentration) of 9.06+/-0.031 (mean +/- SD) and a maximal effect (Emax) of 1.64+/-1.0 mN at 3 x 10(-9) mol/L in sham-operated animals. This dilation was reduced 24 and 48 hours after cold lesion by 33% and 73%, respectively, at 3 x 10(-9) mol/L. The effects of acetylcholine (10(-8) to 10(-4) mol/L) and sodium nitroprusside (10(-3) mol/L) were unaltered. Activation of the ETB receptor in thoracic aorta by the specific agonist IRL 1620 also resulted in a reduced dilation (51% by 48 hours after cold lesion). Reverse transcriptase-polymerase chain reaction of the BA showed unaltered expression of mRNA for the ETB receptor after cold lesion whereas ETB immunoreactivity in BA and in its intraparenchymal arteries was reduced at 24 and 48 hours. In contrast to the reduction of ET-3-induced dilation, the constrictor effects of ET-1 and ET-3 were retained after cold lesion. Endothelin-1 (10(-12) to 10(-6) mol/L) dose-dependently contracted segments of untreated control BA segments under resting conditions with a pD2 of 8.03+/-0.22 and an Emax of 6.35+/-0.70 mN. Further evidence that the constrictor ability of BA was not influenced by cold lesion is given by the unaltered response to 124 mmol/L K+ and 10(-6) mol/L serotonin. We conclude that the ETB receptor of BA after cold lesion is downregulated specifically, apparently at the posttranscriptional level. Because the ETB-mediated dilation in thoracic aorta was also reduced, downregulation of the ETB receptor apparently is not restricted to cerebral arteries. The nitric oxide-cyclic guanosine monophosphate system in BA is, however, intact.
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Beisteiner R, Windischberger C, Edward V, Kaindl T, Barth M, Erdler M, Moser E. Is MEG superior to EPI FMRI in localizing neuronal activity? Neuroimage 1998. [DOI: 10.1016/s1053-8119(18)31503-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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109
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Barth M, Diemling M, Moser E. Modulation of signal changes in gradient-recalled echo functional MRI with increasing echo time correlate with model calculations. Magn Reson Imaging 1997; 15:745-52. [PMID: 9309605 DOI: 10.1016/s0730-725x(97)00043-x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Based on systematic in vivo studies analysed by fuzzy clustering, we prove the complex dependence of functional magnetic resonance imaging (fMRI) signal changes on echo time (TE) (ranging from 42 ms up to 160 ms) in the human visual cortex at 1.5 Tesla. We obtain a steady increase of signal enhancement with increasing TE, except at TE = 130 ms where the signal increase is significantly less than at 100 and 160 ms, respectively, caused by signal dephasing of spins in the vascular environment of the cortical region imaged. A comparison with model calculations reveals that vessels with a diameter of about 0.5 to 1 mm may be the main source of gradient-recalled echo fMRI signal changes at 1.5 Tesla at the given spatial resolution. In addition to conventional correlation analysis, fuzzy cluster analysis has been applied to evaluate fMRI data sets. Our results also indicate that, despite the similar temporal pattern of the functional response, it is possible to differentiate between areas which show higher signal enhancement (cluster 1, higher blood volume fraction) and lower signal enhancement (cluster 2, lower blood volume fraction), reflecting the different vascular environment. Therefore, fuzzy cluster analysis may help to extract functional information from activated areas closer to the actual neuronal activation.
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110
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Diemling M, Barth M, Moser E. Quantification of signal changes in gradient recalled echo FMRI. Magn Reson Imaging 1997; 15:753-62. [PMID: 9309606 DOI: 10.1016/s0730-725x(97)00030-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Understanding and quantifying the various contributions to functional magnetic resonance imaging (FMRI) signal changes in activated cortical areas is paramount for a clinical application of brain mapping by FMRI. Therefore, all significant contributions to FMRI signal changes, both extra- and intravascular, from macrovessels down to the capillary network, should be taken into account. We present a gradient-recalled-echo FMRI model based on in-flow effects described by the Bloch equations, adding susceptibility effects empirically via T2* differences measured in vitro in human blood samples. Results of these calculations (by systematically varying alpha, echo time (TE), repetition time (TR), as well as blood velocity and T2* upon stimulation) may be used to (a) simulate functional MRI experiments with different measurement protocols and (b) estimate realistic values for important anatomical and physiological details that influence local signal changes in FMRI (i.e., size and distribution of vessels, effective relaxation times of blood, etc.). The excellent agreement between our model calculations and experimental results from conventional gradient recalled echo fMRI in vivo suggests a significant contribution from very slow flow and oxygenation changes, predominantly in small vessels (vblood = 1-4 mm/s). The actual contribution of T1- and T2-related effects is strongly dependent on sequence design and actual sequence parameters used. Thus, the model simulations presented may also be used to optimize measurement protocols for investigating various neurophysiological phenomena.
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Trattnig S, Kontaxis G, Breitenseher M, Czerny C, Rand T, Turetschek K, Barth M, Imhof H. [MRI on low-field tomography systems (0.2 Tesla). A quantitative comparison with equipment of medium-field strength (1.0 Tesla)]. Radiologe 1997; 37:773-7. [PMID: 9454269 DOI: 10.1007/s001170050281] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
AIM OF THE STUDY Using phantom studies, a dedicated low-field MR system with 0.2 T and a whole-body MR-scanner with 1.0 T were compared. METHODS A spin-echo sequence was performed on the 0.2-T MR unit using the knee coil and on the 1.0-T MR unit with the head coil. In a water-filled phantom, signal-to-noise ratios (SNR) were calculated and contrast measurements on gels with well-defined relaxation times were obtained and compared to nominal relaxation times. Measurements of T1 and T2 relaxation times on the low-field system were compared to the 1.0-T unit. As a parameter for geometrical image quality, magnetic field distortions were calculated. In theory, influence of field strength and and receiver bandwidth on the minimal echo time and on chemical shift artifacts were calculated. RESULTS The SNR was 63.2 on the 0.2-T and 179.6 on the 1.0-T MR unit (difference factor 3, against a theoretical difference of 5-16). Relaxation times on the low-field system were significantly (around 40-50%) lower. Measurements of contrast were similar on both systems. On the low-field system geometrical distortions of several pixels were recorded. The minimal echo time on the low-field system was 21.3 ms with the low receiver bandwidth and 4.3 ms on the 1.0-T MR unit. The amount of chemical shift artefacts was the same on both systems. DISCUSSION On low-field MR systems SNR is markedly improved by small read-out gradients and a low receiver bandwidth (factor 3 vs 5-16 in comparison with the 1.0-T MR unit). However, an optimal homogeneous magnetic field is required, since inhomogeneities may create severe geometrical distortion.
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Barth M, Heisenberg M. Vision affects mushroom bodies and central complex in Drosophila melanogaster. Learn Mem 1997; 4:219-29. [PMID: 10456065 DOI: 10.1101/lm.4.2.219] [Citation(s) in RCA: 92] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
The brain of Drosophila is structurally altered by sensory stimuli that the flies receive during their adult life. Size and fiber number of the mushroom bodies, central complex, and optic lobes are influenced by social, spatial, or olfactory cues. Recently, the optic lobes have been shown to depend on the light regime that flies experience. Structural plasticity in the brain is thought to be a correlate of functional adaptations and long-term memory. We therefore extend our investigation of volume changes to the calyces of the mushroom bodies and the central complex. We show that rearing flies in constant light for 4 days increases the volume of both structures by up to 15% compared to rearing them in total darkness. Much of this difference develops during the first day. The effect of light is not hormonally mediated, as monocularly deprived flies develop a smaller ipsilateral calyx. Mutant analysis suggests that light generates its effects through known visual pathways. In contrast to the optic lobes, in the calyx and central complex structural changes can be linked to cAMP signaling, as in the mutants dunce1 and amnesiac1 no volume differences are observed. Surprisingly, the mutant rutabaga1 shows a prominent light-dependent volume increase in the calyx and central complex, dissociating structural from behavioral plasticity. In complete darkness wild-type flies grow larger calyces under crowded conditions in their normal culture vials than if kept in small groups on fresh food. This stimulating effect of crowding is not observed in any of the cAMP mutants, including rutabaga1.
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Barth M, Moser E. Proton NMR relaxation times of human blood samples at 1.5 T and implications for functional MRI. Cell Mol Biol (Noisy-le-grand) 1997; 43:783-91. [PMID: 9298600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
To further investigate the dependency of fMRI signal changes on echo time TE, we measured T2 and T2* values, obtained from human blood samples at various oxygenation levels and used them in a simple model to calculated signal enhancement in fMRI. In addition, the longitudinal relaxation time T1 of human blood was determined for reference. All measurements were performed at 23 degrees C to reduce blood cell metabolism during the measurement procedure. At 23 degrees C T1 values of 1434 +/- 48 ms for arterial human blood were obtained after correcting for hematocrit content, as hematocrit values ranged fro 28% to 34% only. The T2 relaxation times obtained are 181 +/- 23 ms for venous and 254 +/- 26 ms for arterial human blood, T2* relaxation times corrected for inhomogeneities of the static magnetic field (B0) are 42 +/- 2.8 ms and 254 +/- 32 ms, respectively. Furthermore, absolute and relative signal changes in fMRI experiments are calculated. The results from these model calculations reveal that contrast in fMRI can be optimised by choosing an appropriate echo time.
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Barth M, Hirsch HV, Meinertzhagen IA, Heisenberg M. Experience-dependent developmental plasticity in the optic lobe of Drosophila melanogaster. J Neurosci 1997; 17:1493-504. [PMID: 9006990 PMCID: PMC6793721] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Early experience can affect nervous system development in both vertebrate and invertebrate animals. We have now demonstrated that visual stimulation modifies the size of the optic lobes in the laboratory fruitfly Drosophila melanogaster. Monocular deprivation (painting over one eye) decreases the aggregate volume of the lamina, medulla, and lobula plate by up to 6%. The laminae of control flies kept in complete darkness showed a more robust volume difference that could be as much as 30%. An electron microscopy study revealed that the changes in the lamina are largely attributable to an increase in the terminals of the photoreceptor cell axons. The volume of the lamina increases during the first 24 hr after emergence, and it grows more in the light than in darkness. When flies are kept in the dark for the first 12 hr of their adult life and are then brought back to light for the next 3.5 days, the lamina is almost as small as in flies raised for 4 d in constant darkness. Twelve hour dark shifts at a later time are less effective. This finding suggests a critical period for lamina development during day 1 of the adult. The lamina depends on visual stimulation to maintain its size during the first 5 d after emergence. Dark-rearing for 1 d or more at any stage during that period decreases its volume to the level of flies raised in constant darkness. A lamina that is once reduced in size seems not to recover.
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Muffler A, Barth M, Marschall C, Hengge-Aronis R. Heat shock regulation of sigmaS turnover: a role for DnaK and relationship between stress responses mediated by sigmaS and sigma32 in Escherichia coli. J Bacteriol 1997; 179:445-52. [PMID: 8990297 PMCID: PMC178715 DOI: 10.1128/jb.179.2.445-452.1997] [Citation(s) in RCA: 92] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
The cellular level of the rpoS-encoded sigmaS subunit of RNA polymerase increases in response to various stress situations that include starvation, high osmolarity, and shift to acid pH, and these different stress signals differentially affect rpoS translation and/or sigmaS stability. Here we demonstrate that sigmaS is also induced by heat shock and that this induction is exclusively due to an interference with sigmaS turnover. Some sigmaS-dependent genes exhibit similar heat shock induction, whereas others are not induced probably because they need additional regulatory factors that might not be present under conditions of heat shock or exponential growth. Despite its induction, sigmaS does not seem to contribute to heat adaptation but may induce cross-protection against different stresses. While sigmaS is not involved in the regulation of the heat shock sigma factor sigma32, the heat shock protein DnaK has a positive role in the posttranscriptional control of sigmaS. The present evidence suggests that DnaK is involved in the transduction of two of the signals that result in reduced sigmaS turnover, i.e., heat shock and carbon starvation. Heat shock induction of sigmaS also clearly indicates that a cessation of growth or even a reduction of the growth rate is not a prerequisite for the induction of sigmaS and sigmaS-dependent genes and underscores the importance of sigmaS as a general stress sigma factor.
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Beisteiner R, Langenberger W, Teichtmeister C, Edward V, Barth M, Moser E. High temporal and high spatial resolution FMRI allowsimproved combination with electrophysiological brain mapping methods. Neuroimage 1996. [DOI: 10.1016/s1053-8119(96)80013-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
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117
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Barth M, Marschall C, Muffler A, Fischer D, Hengge-Aronis R. Role for the histone-like protein H-NS in growth phase-dependent and osmotic regulation of sigma S and many sigma S-dependent genes in Escherichia coli. J Bacteriol 1995; 177:3455-64. [PMID: 7768855 PMCID: PMC177049 DOI: 10.1128/jb.177.12.3455-3464.1995] [Citation(s) in RCA: 165] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023] Open
Abstract
The sigma S subunit of RNA polymerase (encoded by the rpoS gene) is the master regulator in a complex regulatory network that controls stationary-phase induction and osmotic regulation of many genes in Escherichia coli. Here we demonstrate that the histone-like protein H-NS is also a component of this network, in which it functions as a global inhibitor of gene expression during the exponential phase of growth. On two-dimensional gels, at least 22 sigma S-controlled proteins show increased expression in an hns mutant. H-NS also inhibits the expression of sigma S itself by a mechanism that acts at the posttranscriptional level. Our results indicate that relief of repression by H-NS plays a role in stationary-phase induction as well as in hyperosmotic induction of rpoS translation. Whereas certain sigma S-dependent genes (e.g., osmY) are only indirectly regulated by H-NS via its role in the control of sigma S expression, others are also H-NS-regulated in a sigma S-independent manner. (For this latter class of genes, rpoS hns double mutants show higher levels of expression than mutants deficient in rpoS alone.) In addition, we demonstrate that the slow-growth phenotype of hns mutants is suppressed in hns rpoS double mutants and that many second-site suppressor mutants that spontaneously arise from hns strains carry lesions that affect the expression of sigma S.
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Barth M, Wei B, Herlach DM. Crystal growth in undercooled melts of the intermetallic compounds FeSi and CoSi. PHYSICAL REVIEW. B, CONDENSED MATTER 1995; 51:3422-3428. [PMID: 9979149 DOI: 10.1103/physrevb.51.3422] [Citation(s) in RCA: 86] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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119
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Hirsch H, Barth M, Luo S, Sambaziotis H, Huber M, Possidente D, Ghiradella H, Tompkins L. Early visual experience affects mate choice of Drosophila melanogaster. Anim Behav 1995. [DOI: 10.1016/0003-3472(95)80038-7] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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120
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DeProspo D, Kalelkar M, Aderholz M, Akbari H, Allport PP, Ammosov VV, Andryakov A, Asratyan A, Badyal SK, Ballagh HC, Baton J, Barth M, Bingham HH, Brucker EB, Burnstein RA, Cence RJ, Chatterjee TK, Clayton EF, Corrigan G, Coutures C, Ermolov P, Erofeeva I, Faulkner PJ, Foeth H, Fretter WB, Gapienko G, Gupta VK, Hanlon J, Harigel G, Harris FA, Ivanilov A, Jabiol M, Jacques P, Jain V, Jones GT, Jones MD, Kafka T, Kaftanov V, Kasper P, Kobrin V, Kohli JM, Koller EL, Korablev V, Kubantsev M, Lauko M, Lukina O, Lys JE, Lyutov S, Marage P, Milburn RH, Mittra IS, Mobayyen MM, Moreels J, Morrison DR, Moskalev V, Murzin V, Myatt G, Nailor P, Naon R, Napier A, Neveu M, Passmore D. Neutral strange particle production in neutrino and antineutrino charged-current interactions on neon. PHYSICAL REVIEW. D, PARTICLES AND FIELDS 1994; 50:6691-6703. [PMID: 10017647 DOI: 10.1103/physrevd.50.6691] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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121
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Lange R, Barth M, Hengge-Aronis R. Complex transcriptional control of the sigma s-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationary-phase response of Escherichia coli. J Bacteriol 1993; 175:7910-7. [PMID: 8253679 PMCID: PMC206969 DOI: 10.1128/jb.175.24.7910-7917.1993] [Citation(s) in RCA: 98] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
osmY (csi-5) is a representative of a large group of sigma s-dependent genes in Escherichia coli that exhibit both stationary-phase induction and osmotic regulation. A chromosomal transcriptional lacZ fusion (csi-5::lacZ) was used to study the regulation of osmY. We show here that in addition to sigma s, the global regulators Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex (cAMP-CRP), and integration host factor (IHF) are involved in the control of osmY. All three regulators negatively modulate the expression of osmY, and they act independently from sigma s. Stationary-phase induction of osmY in minimal medium can be explained by stimulation by sigma s combined with a relief of Lrp repression. Stationary-phase induction of osmY in rich medium is mediated by the combined action of sigma s, Lrp, cAMP-CRP, and IHF, with the latter three proteins acting as transition state regulators. The transcriptional start site of osmY was determined and revealed an mRNA with an unusual long nontranslated leader of 244 nucleotides. The regulatory region is characterized by a sigma 70-like -10 promoter region and contains potential binding sites for Lrp, CRP, and IHF. Whereas sigma s, Lrp, CRP, and IHF are clearly involved in stationary-phase induction, none of these regulators is essential for osmotic regulation of osmY.
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Willocq S, Aderholz M, Akbari H, Allport PP, Badyal SK, Ballagh HC, Barth M, Bingham HH, Brucker EB, Burnstein RA, Cence RJ, Chatterjee TK, Clayton EF, Corrigan G, Faulkner PJ, Foeth H, Fretter WB, Gupta VK, Hanlon J, Harigel G, Harris FA, Jacques P, Jain V, Jones GT, Jones MD, Kafka T, Kalelkar M, Kohli JM, Koller EL, Krawiec RJ, Lauko M, Lys JE, Marage P, Milburn RH, Mittra IS, Mobayyen MM, Moreels J, Morrison DR, Myatt G, Nailor P, Naon R, Napier A, Passmore D, Peters MW, Peterson VZ, Plano R, Rao NK, Rubin HA, Sacton J, Sambyal SS, Schmitz N, Schneps J, Singh JB, Singh S, Smart W, Stamer P, Varvell KE, Verluyten L, Wachsmuth H, Wainstein S, Yost GP. Coherent production of single pions and rho mesons in charged-current interactions of neutrinos and antineutrinos on neon nuclei at the Fermilab Tevatron. PHYSICAL REVIEW. D, PARTICLES AND FIELDS 1993; 47:2661-2674. [PMID: 10015866 DOI: 10.1103/physrevd.47.2661] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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Nar H, Huber R, Messerschmidt A, Filippou AC, Barth M, Jaquinod M, van de Kamp M, Canters GW. Characterization and crystal structure of zinc azurin, a by-product of heterologous expression in Escherichia coli of Pseudomonas aeruginosa copper azurin. EUROPEAN JOURNAL OF BIOCHEMISTRY 1992; 205:1123-9. [PMID: 1576995 DOI: 10.1111/j.1432-1033.1992.tb16881.x] [Citation(s) in RCA: 110] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Azurin*, a by-product of heterologous expression of the gene encoding the blue copper protein azurin from Pseudomonas aeruginosa in Escherichia coli, was characterized by chemical analysis and electrospray ionization mass spectrometry, and its structure determined by X-ray crystallography. It was shown that azurin* is native azurin with its copper atom replaced by zinc in the metal binding site. Zinc is probably incorporated in the apo-protein after its expression and transport into the periplasm. Holo-azurin can be reconstituted from azurin* by prolonged exposure of the protein to high copper ion concentrations or unfolding of the protein and refolding in the presence of copper ions. An X-ray crystallographic analysis of azurin* at 0.21-nm resolution revealed that the overall structure of azurin is not perturbed by the metal exchange. However, the geometry of the co-ordination sphere changes from trigonal bipyramidal in the case of copper azurin to distorted tetrahedral for the zinc protein. The copper ligand Met121 is no longer co-ordinated to zinc which adopts a position close to the carbonyl oxygen atom from residue Gly45. The polypeptide structure surrounding the metal site undergoes moderate reorganization upon zinc binding. The largest displacement observed is for the carbonyl oxygen from residue Gly45, which is involved in copper and zinc binding. It moves by 0.03 nm towards the zinc, thereby reducing its distance to the metal from 0.29 nm in the copper protein to 0.23 nm in the derivative.
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Aderholz M, Aggarwal MM, Akbari H, Allport PP, Badyal SK, Ballagh HC, Barth M, Baton JP, Bingham HH, Brucker EB, Burnstein RA, Campbell JR, Cence RJ, Chatterjee TK, Clayton EF, Corrigan G, Coutures C, DeProspo D, Faulkner PJ, Foeth H, Fretter WB, Gupta VK, Hanlon J, Harigel G, Harris FA, Jabiol MA, Jacques P, Jain V, Jones GT, Jones MD, Kafka T, Kalelkar M, Kasper P, Kohli JM, Koller EL, Krawiec RJ, Lauko M, Lys JE, Marage P, Milburn RH, Miller DB, Mittra IS, Mobayyen MM, Moreels J, Morrison DR, Myatt G, Nailor P, Naon R, Napier A, Neveu M, Passmore D, Peters MW, Peterson VZ, Plano R, Rao NK, Rubin HA, Sacton J, Sambyal SS, Schmitz N, Schneps J, Singh JB, Smart W. Study of high-energy neutrino neutral-current interactions. PHYSICAL REVIEW. D, PARTICLES AND FIELDS 1992; 45:2232-2243. [PMID: 10014605 DOI: 10.1103/physrevd.45.2232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
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Barth M, Sender I. [Help, I can work again. Analysis of the rehabilitation process into work life of a chronically ill patient after survival of myocardial infarct]. Psychother Psychosom Med Psychol 1991; 41:437-45. [PMID: 1771229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
The prime objective of the pension insurances' rehabilitation measures is to successfully reintegrate clients into their working environment. The high number of early retired clients indicates that Germany's health system cannot reach this objective satisfactorily. Empirical studies as to the various causes and factors leading to illness and--as a consequence--to early retirement provided only a few results. The client's personal and psycho-social situation in particular, as well as her/his biographical data and the available scope of action are hardly ever considered appropriately. With this in mind, we set out to reconstruct the rehabilitation process from a client's view using the method of structural hermeneutics. Against the background of biographical development, we describe the origin of illness, rehabilitation results and the opinion of social medicine experts preceding reintegration. The hermeneutic analysis shows that--in spite of the intentions of the persons concerned--an unconscious agreement arises between the client and the therapeutic system manifesting itself in the application of rehabilitation measures reproducing premorbid behaviour. On the basis of the reconstructed client-related situation a critical aspect of the general structure of Germany's health system becomes apparent: the fragmentation of the client into responsibilities of experts giving the opinion and those responsible for treatment.
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