Ceratopteris richardii (C-fern): a model for investigating adaptive modification of vascular plant cell walls

Plant cell walls are essential for most aspects of plant growth, development, and survival, including cell division, expansive cell growth, cell-cell communication, biomechanical properties, and stress responses. Therefore, characterizing cell wall diversity contributes to our overall understanding of plant evolution and development. Recent biochemical analyses, concomitantly with whole genome sequencing of plants located at pivotal points in plant phylogeny, have helped distinguish between homologous characters and those which might be more derived. Most plant lineages now have at least one fully sequenced representative and although genome sequences for fern species are in progress they are not yet available for this group. Ferns offer key advantages for the study of developmental processes leading to vascularisation and complex organs as well as the specific differences between diploid sporophyte tissues and haploid gametophyte tissues and the interplay between them. Ceratopteris richardii has been well investigated building a body of knowledge which combined with the genomic and biochemical information available for other plants will progress our understanding of wall diversity and its impact on evolution and development.

New reports of nuclear DNA content for 407 vascular plant taxa from the United States

BACKGROUND AND AIMS

The amount of DNA in an unreplicated haploid nuclear genome (C-value) ranges over several orders of magnitude among plant species and represents a key metric for comparing plant genomes. To extend previously published datasets on plant nuclear content and to characterize the DNA content of many species present in one region of North America, flow cytometry was used to estimate C-values of woody and herbaceous species collected in Wisconsin and the Upper Peninsula of Michigan, USA.

METHODS

A total of 674 samples and vouchers were collected from locations across Wisconsin and Michigan, USA. From these, C-value estimates were obtained for 514 species, subspecies and varieties of vascular plants. Nuclei were extracted from samples of these species in one of two buffers, stained with the fluorochrome propidium iodide, and an Accuri C-6 flow cytometer was used to measure fluorescence peaks relative to those of an internal standard. Replicate extractions, coefficients of variation and comparisons to published C-values in the same and related species were used to confirm the accuracy and reliability of our results.

KEY RESULTS AND CONCLUSIONS

Prime C-values for 407 taxa are provided for which no published data exist, including 390 angiosperms, two gymnosperms, ten monilophytes and five lycophytes. Non-prime reports for 107 additional taxa are also provided. The prime values represent new reports for 129 genera and five families (of 303 genera and 97 families sampled). New family C-value maxima or minima are reported for Betulaceae, Ericaceae, Ranunculaceae and Sapindaceae. These data provide the basis for phylogenetic analyses of C-value variation and future analyses of how C-values covary with other functional traits.

Biomass and diversity of dry alpine plant communities along altitudinal gradients in the Himalayas

A non-linear relationship between phytodiversity and altitude has widely been reported, but the relationship between phytomass and altitude remains little understood. We examined the phytomass and diversity of vascular plants along altitudinal gradients on the dry alpine rangelands of Ladakh, western Himalaya. We used generalized linear and generalized additive models to assess the relationship between these vegetation parameters and altitude. We found a hump-shaped relationship between aboveground phytomass and altitude. We suspect that this is engendered by low rainfall and trampling/excessive grazing at lower slopes by domestic livestock, and low temperature and low nutrient levels at higher slopes. We also found a unimodal relationship between plant species-richness and altitude at a single mountain as well as at the scale of entire Ladakh. The species-richness at the single mountain peaked between 5,000 and 5,200 m, while it peaked between 3,500 and 4,000 m at entire Ladakh level. Perhaps biotic factors such as grazing and precipitation are, respectively, important in generating this pattern at the single mountain and entire Ladakh.

Understorey vegetation stability and dynamics in unmanaged boreal forests along a deposition gradient in Sweden

The aims of this study were to investigate spatial patterns and temporal changes in understorey vegetation at four forest catchments forming a depositional gradient. Inventories of the bottom and field layers were carried out in the 1990s and repeated after 5-14 years, depending on catchment. It was hypothesized that changes and patterns in ground vegetation would be related to changes and patterns in N and S deposition. The data were analyzed using Ellenberg indices and multivariate methods. All catchments showed temporal changes in species composition. Analyses of the bottom layer were confounded by a change of field staff, but after accounting for this observer effect, differences in species composition between the catchments remained. Within catchments, the changes in species composition were unrelated to N or S deposition. Relationships between environmental factors, expressed as Ellenberg indices, and compositional patterns differed between catchments although Ellenberg indices showed small temporal changes.

Species groups can be transferred across different scales

Aim  To test whether species groups (i.e. assemblages of species co-occurring in nature) that are statistically derived at one scale (broad, medium, or fine scale) can be transferred to another scale, and to identify the driving forces that determine species groups at the various scales. Location  Northern Bohemia (Czech Republic, central Europe) in the Ještědský hřbet mountain range and its neighbourhood. Methods  Three data sets were sampled: a floristic data set at the broad scale, another floristic data set at the intermediate scale, and a vegetation data set at the habitat scale. First, in each data set, species groups were produced by the COCKTAIL algorithm, which ensures maximized joint occurrence in the data set using a fidelity coefficient. Corresponding species groups were produced in the individual data sets by employing the same species for starting the algorithm. Second, the species groups formed in one data set, i.e. at a particular scale, were applied crosswise to the other data sets, i.e. to the other scales. Correspondence of a species group formed at a particular scale with a species group at another scale was determined. Third, to highlight the driving factors for the distribution of the plant species groups at each scale, canonical correspondence analysis was carried out. Results  Twelve species groups were used to analyse the transferability of the groups across the three scales, but only six of them were found to be common to all scales. Correspondence of species groups derived from the finest scale with those derived at the broadest scale was, on average, higher than in the opposite direction. Forest (tree layer) cover, altitude and bedrock type explained most of the variability in canonical correspondence analysis across all scales. Main conclusions  Transferability of species groups distinguished at a fine scale to broader scales is better than it is in the opposite direction. Therefore, a possible application of the results is to use species groups to predict the potential occurrence of missing species in broad-scale floristic surveys from fine-scale vegetation-plot data.

Primary cell wall composition of pteridophytes and spermatophytes

•  Primary cell walls (PCWs) of major vascular plant taxa were analysed as a contribution towards understanding wall evolution. •  Alcohol-insoluble residues from immature shoots were acid- or enzyme-hydrolysed and the products analysed chromatographically and electrophoretically. •  There were phylogenetic differences in abundance of mannose, galacturonate and glucuronate residues, mixed-linkage glucan (MLG) and tannins. Eusporangiate pteridophytes (lycopodiophytes, a psilotophyte, an equisetophyte and a eusporangiate fern) were richer in mannose than leptosporangiate ferns, gymnosperms and angiosperms. Galacturonate was always the most abundant uronate; glucuronate was not abundant in PCWs of vascular plants except angiosperms (especially monocots and some magnoliids). MLG was detected in the Poaceae and Flagellariaceae, but no other vascular plants. Proanthocyanidins were associated with PCWs from leptosporangiate ferns, gymnosperms and some angiosperms, but not eusporangiate pteridophytes. Xyloglucan was present in all vascular plants tested. •  The results imply that major evolutionary changes in the PCW occurred not only during the charophyte-bryophyte and bryophyte-lycopodiophyte transitions but also after plants attained the vascular condition and upright growth habit, particularly during the eusporangiate-leptosporangiate transition.

Nuclear DNA C-values in 30 species double the familial representation in pteridophytes

Nuclear DNA C-values and genome size are important biodiversity characters with fundamental biological significance. Yet C-value data for pteridophytes, a diverse group of vascular plants with approx. 9000 extant species, remain scarce. A recent survey by Bennett and Leitch (2001, Annals of Botany 87: 335-345) found that C-values were reported for only 48 pteridophyte species. To improve phylogenetic representation in this group and to check previously reported estimates, C-values for 30 taxa in 17 families were measured using flow cytometry for all but one species. This technique proved generally applicable, but the ease with which C-value data were generated varied greatly between materials. Comparing the new data with those previously published revealed several large discrepancies. After discounting doubtful data, C-values for 62 pteridophyte species remained acceptable for analysis. The present work has increased the number of such species' C-values by 93 %, and more than doubled the number of families represented (from 10 to 21). Analysis shows that pteridophyte C-values vary approx. 450-fold, from 0-16 pg in Selaginella kraussiana to 72.7 pg in Psilotum nudum var. gasa. Superimposing C-value data onto a robust phylogeny of pteridophytes suggests some possible trends in C-value evolution and highlights areas for future work.

TANSLEY REVIEW NO. 5 FRUCTANS AND THE METABOLISM OF SUCROSE IN VASCULAR PLANTS

The occurrence, structure and metabolism of fructose polymers in tissues of vascular plants are discussed in relation to the metabolism of sucrose. Distinctions are made between long-term and short-term storage of such polymers and the regulatory mechanisms which govern accumulation are examined. The roles of various fructosyltransferases in the synthesis of the different fructan structures from sucrose are outlined. The potential selective advantages of the possession of fructan metabolism in different species are assessed with reference to possible roles as cryoprotectants, in osmotic control and as storage carbohydrates whose metabolism can continue at low temperatures (0 to 5°C). It is concluded that the complexity and variety of fructan structures and of the associated enzyme systems has resulted in an incomplete understanding of their physiology and biochemistry, but their significance as an alternative storage polysaccharide in both leaves and storage organs should not be underestimated. Contents I. Introduction II. The structure of fructans in vascular plants: variations on a theme 2 III. The enzymes of fructan synthesis: common elements and sources of structural diversity 5 IV. The comparative biology of fructan metabolism: diversity in occurrence and function 11 V. Concluding remarks 19 Acknowledgements 19 References 19.