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Liu W, Yin J, Zhao G, Yun Y, Wu S, Jones K, Lei A. Differential regulation of cyclin B1 degradation between the first and second meiotic divisions of bovine oocytes. Theriogenology 2012; 78:1171-81.e1. [DOI: 10.1016/j.theriogenology.2012.06.006] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2011] [Revised: 06/04/2012] [Accepted: 06/05/2012] [Indexed: 11/28/2022]
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Li S, Sun L, Wu H, Hu Z, Liu W, Li Y, Wen X. The intestinal microbial diversity in mud crab (Scylla paramamosain
) as determined by PCR-DGGE and clone library analysis. J Appl Microbiol 2012; 113:1341-51. [DOI: 10.1111/jam.12008] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2012] [Revised: 09/03/2012] [Accepted: 09/04/2012] [Indexed: 11/26/2022]
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Hu H, Yang H, Lu J, Chen K, Qiu Y, Liu W, Luo Z. Association of telomerase expression with recurrence of sacral chordoma. Ann Oncol 2012; 23:2772. [DOI: 10.1093/annonc/mds462] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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1379
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Han XZ, Gao S, Cheng YN, Sun YZ, Liu W, Tang LL, Ren DM. Protective effect of naringenin-7-O-glucoside against oxidative stress induced by doxorubicin in H9c2 cardiomyocytes. Biosci Trends 2012; 6:19-25. [PMID: 22426099 DOI: 10.5582/bst.2012.v6.1.19] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Doxorubicin (DOX) is one of the most effective chemotherapeutic agents, but cardiotoxicity limits its clinical use. Although the mechanisms are not entirely understood, reactive oxygen species (ROS) and cardiomyocyte apoptosis appear to be involved in DOX cardiotoxicity. Protection or alleviation of DOX cardiotoxicity can be achieved by administration of natural phenolic compounds via activating endogenous defense systems and antiapoptosis. Naringenin-7-O-glucoside (NARG), isolated from Dracocephalum rupestre Hance, could protect from cardiomyocyte apoptosis and induce endogenous antioxidant enzymes against DOX toxicity, but the effects on intracellular ROS generation and cell membrane stability were not demonstrated. In the present study, we investigated the effects of NARG on H9c2 cell morphology, viability, lactate dehydrogenase (LDH) and creatine kinase (CK) leakage, glutathine peroxidase (GSH-Px) activity, intracellular Ca2+ concentration, and ROS generation. Compared with DOX alone treatment group, the morphological injury of the cells in groups treated by DOX plus NARG was alleviated, cell viability was increased, the amount of released LDH and CK was significantly decreased, the activity of GSH-Px was increased, the content of intracellular Ca2+ and ROS generation was lowered remarkably. These results suggest that NARG could prevent cardiomyocytes from DOX-induced toxicity by their property of stabilizing the cell membrane and reducing ROS generation.
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Liu W, Huang ZF, Ye QF, Ye SJ. Transfusion of endothelial cells with lentivirus-mediated expression of fas ligand prolonged survival of rat liver allograft. Transplant Proc 2012; 44:1399-403. [PMID: 22664023 DOI: 10.1016/j.transproceed.2011.11.071] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2011] [Revised: 09/16/2011] [Accepted: 11/23/2011] [Indexed: 11/30/2022]
Abstract
BACKGROUND Immunologically privileged sites have been shown to express Fas ligand (FasL) and may protect themselves by inducing apoptosis of infiltrating inflammatory cells. We asked whether the Fas/FasL interaction could be used to protect liver allograft from acute rejection. We proposed that endothelial cells that are resistant to Fas-mediated killing could be considered as a vehicle for expression of recombinant FasL. METHODS Based on the lenti-rFasl/puro expression system, constructs were designed that allowed endothelial cell-specific and continual expression of FasL. Endothelial cells with expression of FasL or viruses recombinant with FasL gene were transfused into portal vein of recipient rats during liver transplant surgery. Comparing groups of rats after liver transplant surgery using regular dose of FK506 and with no other treatment, we observed the aspartate aminotransferase and BIL value and survival of four groups of rat recipients. RESULTS Values of AST and BIL in the cell and virus transfusion groups were between FK506 and contrast groups. The survival of cell and virus transfusion groups were longer than contrast group and shorter than FK506 group. CONCLUSION This in vitro model shows that endothelial cells with expression of FasL or viruses recombinant with FasL gene transfusion can preserve liver function and prolong the survival time of liver allografts.
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Liu W, Fan Z, Han Y, Zhang D, Li J, Wang H. Intranuclear localization of apoptosis-inducing factor and endonuclease G involves in peroxynitrite-induced apoptosis of spiral ganglion neurons. Neurol Res 2012; 34:915-22. [PMID: 23006905 DOI: 10.1179/1743132812y.0000000098] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
OBJECTIVES The present study was designed to determine whether or not the caspase-independent apoptotic pathway participated in the cellular death of spiral ganglion neurons (SGNs) after exposure to peroxynitrite (ONOO(-)), with particular attention given to the intranuclear translocation of mitochondrial apoptosis-inducing factor (AIF) and endonuclease G (Endo G) in this process. METHODS The rat SGNs were isolated and primary cultured in vitro and were exposed to ONOO(-) with pre-treatment of pan-caspase inhibitor. Morphological changes of SGNs were observed by acridine orange cytochemistry staining, and apoptosis was examined by flow cytometry. The translocation of mitochondrial AIF and Endo G was detected by immunocytochemistry and Western blot. The protein expressions of Bcl-2 family in SGNs exposed to ONOO(-) were determined by Western blot. RESULTS Treatment of SGNs with ONOO(-) resulted in the occurrence of caspase-independent apoptosis as evidenced by acridine orange staining and flow cytometry analysis. The immunocytochemical analysis showed that AIF and Endo G labeling were marked in neuronal nuclei, while the Western blot demonstrated the intranuclear localization of AIF and Endo G in SGNs treated with ONOO(-). Western blot analysis demonstrated that ONOO(-) increased the Bax expression while reducing Bcl-2 expression, which was not prevented by pre-treatment with caspase inhibitor. CONCLUSION These data indicate that ONOO(-) can trigger caspase-independent apoptosis in SGNs associated with mitochondrial AIF and Endo G intranuclear localization.
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Mackie A, Liu W, Marelli A, Kaul P. 796 Changing Hospitalization Rates for Infective Endocarditis Over the Last Decade - A Population-Based Analysis. Can J Cardiol 2012. [DOI: 10.1016/j.cjca.2012.07.716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
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1383
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Wu Y, Li Z, Zhou C, Shun L, Zhang Y, Hou M, Liu W, Wang J, Chen G, Zhou Y. Multi-Center Observational Study on the Diagnosis of Non-Small Cell Lung Cancer Bone Metastasis and the Efficacy and Safety of Bisphosphates Treatment (C-TONG 0801). Ann Oncol 2012. [DOI: 10.1016/s0923-7534(20)33823-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Long JD, Paulsen JS, Zhang Y, Kim JI, Mills JS, Liu W. A07 Critical consideration of the criteria for the motor diagnosis of huntington disease. Journal of Neurology, Neurosurgery and Psychiatry 2012. [DOI: 10.1136/jnnp-2012-303524.7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Jacobsen MK, Liu W, Li B. Measurement setup for the simultaneous determination of diffusivity and Seebeck coefficient in a multi-anvil apparatus. THE REVIEW OF SCIENTIFIC INSTRUMENTS 2012; 83:093903. [PMID: 23020390 DOI: 10.1063/1.4753918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
In this paper, a high pressure setup is presented for performing simultaneous measurements of Seebeck coefficient and thermal diffusivity in multianvil apparatus for the purpose of enhancing the study of transport phenomena. Procedures for the derivation of Seebeck coefficient and thermal diffusivity/conductivity, as well as their associated sources of errors, are presented in detail, using results obtained on the filled skutterudite, Ce(0.8)Fe(3)CoSb(12,) up to 12 GPa at ambient temperature. Together with recent resistivity and sound velocity measurements in the same apparatus, these developments not only provide the necessary data for a self-consistent and complete characterization of the figure of merit of thermoelectric materials under pressure, but also serve as an important tool for furthering our knowledge of the dynamics and interplay between these transport phenomena.
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Weyand S, Shimamura T, Shiroshi M, Tsujimoto H, Winter G, Katritch V, Abagyan R, Cherezov V, Liu W, Han GW, Kobayashi T, Stevens RC, Iwata S. The structure of the human histamine H1 receptor. Acta Crystallogr A 2012. [DOI: 10.1107/s0108767312099448] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Zhong J, Liu W, Liu C, Wang Q, Li T, Tu Z, Luo S, Cai X, Xu Y. Aggregation and conformational changes of bovine β-lactoglobulin subjected to dynamic high-pressure microfluidization in relation to antigenicity. J Dairy Sci 2012; 95:4237-45. [DOI: 10.3168/jds.2012-5333] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2012] [Accepted: 04/05/2012] [Indexed: 11/19/2022]
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Ryan EM, Recknagle KP, Liu W, Khaleel MA. The need for nano-scale modeling in solid oxide fuel cells. JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY 2012; 12:6758-6768. [PMID: 22962819 DOI: 10.1166/jnn.2012.4563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Solid oxide fuel cells (SOFCs) are high temperature fuel cells, which are being developed for large scale and distributed power systems. SOFCs promise to provide cleaner, more efficient electricity than traditional fossil fuel burning power plants. Research over the last decade has improved the design and materials used in SOFCs to increase their performance and stability for long-term operation; however, there are still challenges for SOFC researchers to overcome before SOFCs can be considered competitive with traditional fossil fuel burning and renewable power systems. In particular degradation due to contaminants in the fuel and oxidant stream is a major challenge facing SOFCs. In this paper we discuss ongoing computational and experimental research into different degradation and design issues in SOFC electrodes. We focus on contaminants in gasified coal which cause electrochemical and structural degradation in the anode, and chromium poisoning which affects the electrochemistry of the cathode. Due to the complex microstructures and multi-physics of SOFCs, multi-scale computational modeling and experimental research is needed to understand the detailed physics behind different degradation mechanisms, the local conditions within the cell which facilitate degradation, and its effects on the overall SOFC performance. We will discuss computational modeling research of SOFCs at the macro-, meso- and nano-scales which is being used to investigate the performance and degradation of SOFCs. We will also discuss the need for a multi-scale modeling framework of SOFCs, and the application of computational and multi-scale modeling to several degradation issues in SOFCs.
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1389
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Liu W, Li N. Chicken sine oculis binding protein homolog (sobp), a novel gene that may regulate feather development. Poult Sci 2012; 91:1950-5. [PMID: 22802190 DOI: 10.3382/ps.2011-02114] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Feathers are appendages of skin in avians and provide a model for analyzing skin appendage morphogenesis. The feathers of Chinese Silky (CS) and White Leghorn (WL) chickens have distinct phenotypes. Based on preliminary genetic results, we cloned the chicken gene sobp (encoding sine oculis binding protein homolog, which is expressed at a higher level in the dorsal skin and in the feather follicle in the WL compared with the CS. The reverse-transcription PCR and quantitative real-time PCR indicated that sobp was expressed in many tissues and was continuously expressed during embryonic development in both strains. Northern and Western blotting indicated that the mRNA of sobp was approximately 5 kb and the SOBP protein was approximately 96 kDa. The expressions of signaling molecules that affect feather development were similar. This study is the first report of sobp expression in chickens. Our results suggest that sobp might regulate distinct feather type.
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Hu X, Zhang P, Shang A, Li Q, Xia Y, Jia G, Liu W, Xiao X, He D. A primary proteomic analysis of serum from patients with nonfunctioning pituitary adenoma. J Int Med Res 2012; 40:95-104. [PMID: 22429349 DOI: 10.1177/147323001204000110] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
OBJECTIVE The early diagnosis of nonfunctioning pituitary adenoma (NFPA) is difficult. The objective of this study was to find specific protein biomarkers to aid in the early detection of NFPA. METHODS Serum samples from 34 patients with NFPA and 34 age- and sex-matched healthy control subjects were analysed using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF-MS) technology. The spectra were generated, protein peak clustering was performed and classification analyses were carried out using a decision tree classification algorithm. RESULTS Nine differentially expressed serum proteins were identified in the patients with NFPA compared with the control subjects. Both the sensitivity and specificity of the decision tree classification algorithm were 82.4% for NFPA. CONCLUSIONS Nine new serum protein biomarkers for NFPA were identified. SELDI-TOF-MS coupled with data mining tools might provide a novel approach for the early diagnosis of NFPA and population screening for the disease.
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Liu W, Xie L, Liu H, Xu S, Hu B, Cao W. Determination of estradiol valerate in pharmaceutical preparations and human serum by flow injection chemiluminescence. LUMINESCENCE 2012; 28:407-11. [DOI: 10.1002/bio.2397] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2012] [Revised: 04/07/2012] [Accepted: 05/16/2012] [Indexed: 11/08/2022]
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Guo W, Bai X, Han Y, Xu L, Liu W, Zhang G, Li J, Fan Z, Wang H. Expressions of TGF-β1 and MMP-9 in a guinea pig model of tympanosclerosis: possible role in the pathogenesis of this disorder. Laryngoscope 2012; 122:2037-42. [PMID: 22777961 DOI: 10.1002/lary.23415] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2011] [Revised: 04/11/2012] [Accepted: 04/16/2012] [Indexed: 01/22/2023]
Abstract
OBJECTIVES/HYPOTHESIS The present study was performed to investigate the expressions of transforming growth factor β1 (TGF-β1) and matrix metalloproteinase-9 (MMP-9) in an experimental model of tympanosclerosis and their possible roles in the formation of this disorder. STUDY DESIGN A prospective experimental animal study. METHODS Seventy guinea pigs were used in this study, of which 10 were chosen to serve as controls, and the other 60 were used in the tympanosclerosis group by inoculation of type-3 Streptococcus pneumoniae microorganisms. The experimental animals were further divided into six subgroups on the basis of six time points. Otomicroscopy was employed to observe the development of myringosclerosis. Hematoxylin-eosin and von Kossa staining were performed to determine the morphological changes and calcium depositions. The expressions of TGF-β1 and MMP-9 were assessed by Western blot and immunohistochemistry. RESULTS Slight sclerotic changes in tympanic membrane were found at week 2, and extensive myringosclerosis was observed at week 6. Hyalinization and calcification in the tympanic membrane and middle ear mucous membrane were clearly visible at week 6. Expression of TGF-β1 was significantly increased with the development of tympanosclerosis. Expression of MMP-9 was increased from week 1 to week 4, and then declined at week 6. These two cytokines were both distributed in the cytoplasm of fibroblast cells and inflammatory cells, which were widely distributed in the tympanic membrane and middle ear mucosa at week 6. CONCLUSIONS Our data indicate that, for the first time, the alteration in expressions of TGF-β1 and MMP-9 were involved in the formation of tympanosclerosis, which may represent an important mechanism underlying the pathogenesis of tympanosclerosis.
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Yang X, Coleman DP, Pugh ND, Liu W, Nokes L. Quantitative assessment of intra-vascular volume in human Achilles tendinopathy. J Med Eng Technol 2012; 35:172-8. [DOI: 10.3109/03091902.2011.558170] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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1394
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Shang W, Feng G, Sun R, Wang X, Liu W, Zhang S, Li J, Pang X, Wang Y, Zhang W. Comparison of micafungin and voriconazole in the treatment of invasive fungal infections in kidney transplant recipients. J Clin Pharm Ther 2012; 37:652-6. [PMID: 22725946 DOI: 10.1111/j.1365-2710.2012.01362.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
WHAT IS KNOWN AND OBJECTIVE Invasive fungal infections are a major threat to renal transplant recipients. Micafungin and voriconazole are two useful antifungal agents for treating such infections. Our objective is to evaluate the comparative efficacy and safety of micafungin and voriconazole in the initial treatment of such infections. METHODS In this prospective, multicentre, open-labelled, randomized, controlled trial, renal transplant recipients with invasive fungal infections were assigned to receive either micafungin or voriconazole. The enrolled subjects received a kidney transplant between March 2008 and March 2010 at one of the two transplant centres in Henan Province, China. The efficacy and adverse effects of the two treatments were compared. RESULTS AND DISCUSSION The clinical trial enrolled 65 patients, of whom 31 were treated with micafungin, and 34 with voriconazole. The rates of microbiological evidence of infection in the micafungin and voriconazole groups were 64.5% and 70.5%, respectively, whereas the rates of Candida as the major cultured fungus were 80.0% and 75.0%, respectively. Complicated bacterial infection rates in the two treatment groups were 38.7% and 32.4%, respectively, whereas complicated CMV viral infection occurred at a rate of 19.2% and 23.5%, respectively. Fungal infection within one to 3 months after transplant was 83.6% (26/31) and 85.3% (29/34) in the micafungin and voriconazole groups, respectively. There was no significant difference between the two groups in terms of efficacy, survival beyond 10 days and discontinuation of treatment because of lack of efficacy (P > 0.05). Mortality rates in the micafungin and voriconazole groups were 9.7% (3/31) and 12.1% (4/33), respectively. Rates of adverse effects in the two groups were 41.9% and 51.6% (P > 0.05), respectively. WHAT IS NEW AND CONCLUSIONS This is the first comparison of micafungin and voriconazole in renal transplant patients. Our study shows that the effectiveness of micafungin was similar to that of voriconazole in such patients.
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Brinkman T, Liu W, Armstrong G, Gajjar A, Merchant T, Kimberg C, Kun L, Srivastava DK, Gurney J, Robison L, Hudson M, Krull K, Rubens J, Lulla RR, Lai JS, Fangusaro J, Wolfe K, Madan-Swain A, Reddy A, Hunter G, Banos J, Kana R, Resch A, von Hoff K, von Buren AO, Friedrich C, Treulieb W, Lindow C, Kwiecien R, Ottensmeier H, Rutkowski S, Armstrong CL, Phillips PC, Lustig RA, Stamos C, Li Y, Belasco J, Minturn JE, Fisher MJ, Heinks-Maldonado T, Wingeier K, Lory V, Schafer C, Studer M, Steinlin M, Leibundgut K, de Ruiter M, Schouten N, Greidanus J, Grootenhuis M, Oosterlaan J, A ALV, Grill J, Puget S, Sainte-Rose C, Dufour C, Kieffer V, Dellatolas G, -Shkedi EB, Ben Arush MW, Kaplinsky H, Ash S, Goshen Y, Yaniv I, Cohen IJ, Levy JM, Tello T, Lu X, Gao D, Wilkening G, Donson A, Foreman N, Liu A, Korzeniewska J, Baginska BD, Perek D, Staccioli S, Chieffo D, Petrarca M, Moxon-Emre I, Taylor M, Bouffet E, Malkin D, Hawkins C, Scantlebury N, Mabbott D, Cunningham T, Bouffet E, Scantlebury N, Piscione J, Igoe D, Orfus M, Bartels U, Laughlin S, Tabori U, Mabbott D, Hardy K, Carlson-Green B, Conklin H, Dockstader C, Bouffet E, Wang F, Mabbott D, Bostan S, Dockstader C, Scantlebury N, Bouffet E, Liu F, Wang F, Mabbott D, Zou P, Li Y, Conklin HM, Mulhern RK, Butler RW, Ogg RJ, Diver T, Manley P, Kieran M, Chordas C, Liptak C, Delaney B, Brand S, Rey-Casserly C. NEUROPSYCHOLOGY. Neuro Oncol 2012. [DOI: 10.1093/neuonc/nos103] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Nguyen TD, Markova S, Liu W, Gow JM, Baldwin RM, Habashian M, Relling MV, Ratain MJ, Kroetz DL. Functional characterization of ABCC2 promoter polymorphisms and allele-specific expression. THE PHARMACOGENOMICS JOURNAL 2012; 13:396-402. [PMID: 22664480 PMCID: PMC3435480 DOI: 10.1038/tpj.2012.20] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/27/2011] [Revised: 04/20/2012] [Accepted: 04/23/2012] [Indexed: 01/11/2023]
Abstract
Multidrug resistance protein 2 (MRP2, ABCC2) is an efflux membrane transporter highly expressed in liver, kidney and intestine with important physiological and pharmacological roles. The goal of this study was to investigate the functional significance of promoter region polymorphisms in ABCC2 and potential allele specific expression. Twelve polymorphisms in the 1.6 kb region upstream of the translation start site were identified by resequencing 247 DNA samples from ethnically diverse individuals. Luciferase reporter gene assays showed that ABCC2 -24C>T both alone and as part of a common haplotype (-24C>T/-1019A>G/-1549G>A) increased promoter function 35% compared to the reference sequence (P < 0.0001). No other common variants or haplotypes affected ABCC2 promoter activity. Allele specific expression was also investigated as a mechanism to explain reported associations of the synonymous ABCC2 3972C>T variant with pharmacokinetic phenotypes. In Caucasian liver samples (n=41) heterozygous for the 3972C>T polymorphism, the 3972C allele was preferentially transcribed relative to the 3972T allele (P < 0.0001). This allelic imbalance was particularly apparent in samples with haplotypes containing two or three promoter/UTR variants (-1549G>A, -1019A>G and -24C>T). The observed allelic imbalance was not associated with hepatic or renal ABCC2 mRNA expression. Additional mechanisms will need to be explored to account for the interindividual variation in ABCC2 expression and MRP2 function.
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Liu W, Frank S, Li X, Li Y, Zhang X, Zhu X, Mohan R. SU-E-T-565: Effectiveness of Robust Optimization in Head and Neck IMPT Dose Distributions. Med Phys 2012; 39:3835. [DOI: 10.1118/1.4735654] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Hsieh YH, Liu W, Rothman R. National trend in infectious disease related hospital emergency department visits in the United States, 2000-2009. Int J Infect Dis 2012. [DOI: 10.1016/j.ijid.2012.05.296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022] Open
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Liu W, Gach M, Ruan D. TU-G-BRA-03: Reconstructing Motion Manifold from Real-Time MRI: A Level Set Approach. Med Phys 2012. [DOI: 10.1118/1.4736007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Liu W, Zhu X, Li X, Li Y, Zhang X, Frank S, Mohan R. SU-E-T-624: Comparison of PTV+PRV-Based Optimization and Robust Optimization in Intensity-Modulated Proton Therapy. Med Phys 2012; 39:3849-3850. [PMID: 28517515 DOI: 10.1118/1.4735714] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Robust optimization leads to IMPT plans that are more robust than and superior in optimality compared to PTV-based optimized plans. Robust optimization incorporates setup and range uncertainties, which implicitly adds margins to targets and organs-at-risk (OARs); whereas PTV-based optimization only considers setup uncertainties and adds margins only to targets in practice. The purpose of this work is to determine if the superiority of robustly optimized plans is due to not assigning margins to OARs during PTV-based optimization. METHODS Plan robustness and optimality of the PTV plus Planning organs-at-Risk Volume (PRVs)-based plans and robustly optimized plans were compared for 5 head and neck cancer cases and one rhabdomyosarcoma case. The PRVs were generated by expansion from OARs by 3 mm. 9 different dose distributions were computed - one each for ± setup uncertainties along three spatial directions, for ± range uncertainty, and the nominal dose distribution. The worst-case dose distribution was obtained by assigning the lowest dose among the 9 doses to each voxel in the target and the highest dose to each voxel outside the target. The DVHs from the worst-case dose were used to assess the plan optimality and robustness. D1cc doses for spinal cord and brainstem, mean doses Dmean for oral cavity and parotids, and D1% doses for other organs were also used to assess plan optimality. D5% and D95% doses are used to assess target dose coverage and homogeneity. RESULTS For H&N cases, PTV+PRV-based optimization was inferior to robust optimization. However, PTV+PRV-based optimization yielded plans that spared OARs better than PTV-based optimization, although the target dose robustness and homogeneity were comparable to the PTV-based optimization. The same conclusions are also valid in the rhabdomyosarcoma case. CONCLUSIONS We find that the PTV+PRV method can partly improve plan optimality, but it is still inferior to robust optimization method. This research is supported by National Cancer Institute (NCI) grant P01CA021239, the University Cancer Foundation via the Institutional Research Grant program at the University of Texas MD Anderson Cancer Center, and MD Anderson’s cancer center support grant CA016672.
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