Chromosomal, epigenetic and microRNA-mediated inactivation of LRP1B, a modulator of the extracellular environment of thyroid cancer cells

The low-density lipoprotein receptor-related protein (LRP1B), encoding an endocytic LDL-family receptor, is among the 10 most significantly deleted genes across 3312 human cancer specimens. However, currently the apparently crucial role of this lipoprotein receptor in carcinogenesis is not clear. Here we show that LRP1B inactivation (by chromosomal, epigenetic and microRNA (miR)-mediated mechanisms) results in changes to the tumor environment that confer cancer cells an increased growth and invasive capacity. LRP1B displays frequent DNA copy number loss and CpG island methylation, resulting in mRNA underexpression. By using CpG island reporters methylated in vitro, we found that DNA methylation disrupts a functional binding site for the histone-acetyltransferase p300 located at intron 1. We identified and validated an miR targeting LRP1B (miR-548a-5p), which is overexpressed in cancer cell lines as a result of 8q22 DNA gains. Restoration of LRP1B impaired in vitro and in vivo tumor growth, inhibited cell invasion and led to a reduction of matrix metalloproteinase 2 in the extracellular medium. We emphasized the role of an endocytic receptor acting as a tumor suppressor by modulating the extracellular environment composition in a way that constrains the invasive behavior of the cancer cells.

Lack of sexual dimorphism in femora of the eusocial and hypogonadic naked mole-rat: a novel animal model for the study of delayed puberty on the skeletal system

Sex steroid hormones are major determinants of bone morphology and quality and are responsible for sexually dimorphic skeletal traits. Hypogonadism results in suboptimal skeletal development and may lead to an increased risk of bone fracture later in life. The etiology of delayed puberty and/or hypothalamic amenorrhea is poorly understood, and experimental animal models addressing this issue are predominantly based upon short-term experimental induction of hormonal suppression via gonadotropin releasing hormone antagonists (GnRH-a). This acute change in hormone profile does not necessarily emulate the natural progression of hypogonadic bone disorders. We propose a novel animal model with which to explore the effects of chronic hypogonadism on bone quality, the naked mole-rat (NMR; Heterocephalus glaber). This mouse-size rodent may remain reproductively suppressed throughout its life, if it remains as a subordinate within the eusocial mole-rat colony. NMRs live in large colonies with a single dominant breeding female. She, primarily by using aggressive social contact, naturally suppresses the hypothalamic gonadotropic axis of subordinate NMRs and thereby their reproductive expression. However, should an NMR be separated from the dominant breeder, within less than a week reproductive hormones may become elevated and the animal attains breeding status. We questioned if sexual suppression of subordinates impact upon the development and maintenance of the femora and lead to a sexually indistinct monomorphic skeleton. Femora were obtained from male and female NMRs that were either non-breeders (subordinate) or breeders at the time of sacrifice. Diaphyseal cross-sectional morphology, metaphyseal trabecular micro-architecture and tissue mineral density of the femur were measured using microcomputed tomography and diaphyseal mechanical properties were assessed by four-point bending tests to failure. Subordinates were sexually monomorphic and showed no significant differences in body weight or femoral bone structure and quality between males and females. Femora of subordinate females differed significantly from that of breeding animals, whereas in males, the divergent trend among breeders and non-breeders did not reach statistical significance. Subordinate NMRs, naturally suppressed from entering puberty, may prove to be a useful model to tease apart the relationship between bone morphology and hypogonadism and evaluate skeletal development during pubertal maturation.

Reducing air-pollution: a new argument for getting drivers to abide by the speed limit?

Speeding is one of the main factors of car crash-risk, but it also contributes to increasing air-pollution. In two studies we attempted to lead drivers to abide by speed limits using "reducing air-pollution" as a new argument. We presented prevention messages that highlighted the role of speeding in increasing "crash-risk", "air-pollution", or both (Studies 1 and 2). The messages were also positively or negatively framed (Study 2). Given that women are more concerned with environmental issues than are men, we expected the following hypotheses to be validated for women. The message with the "air-pollution" argument was expected to be evaluated more positively than the "crash-risk" message (H1). The "air-pollution" and "crash-risk and air-pollution" messages were expected to be more effective than the "crash-risk" message on the behavioral intention to observe speed limits (H2a) and on the perceived efficacy of speed-limit observance in reducing air-pollution (H2b; Studies 1 and 2). Furthermore, positive framing was expected to be more effective than negative framing (H3), and presenting a message to be more effective than presenting no message (H4; Study 2). Broadly, our results argue in favor of our hypotheses. However in Study 2, the effects of message framing did not allow us to conclude that negative or positive framing was superior. All in all, messages with the "air-pollution" argument were more effective at leading drivers to observe speed limits. Thus, environmental protection may be a fruitful route to explore for increasing road safety.

308 GUANACO SPERM CHROMATIN EVALUATION USING TOLUIDINE BLUE

Guanacos, a wild species of South American camelids, have a high-quality fiber with great economic potential. To evaluate reproductive aptitude in guanacos, our laboratory has developed a reliable semen collection technique using electroejaculation and has applied various methods for evaluating semen characteristics. Studies for evaluating the state of sperm chromatin have also been initiated. Toluidine blue (TB) is a cationic stain that unites with the phosphate groups in the DNA, thus permitting differentiation between sperm heads according to the degree of chromatin decondensation. The objectives of this study were to determine the TB staining patterns of guanaco sperm chromatin, establish a positive control for the stain, and evaluate the effect of collagenase on sperm chromatin condensation. Semen was collected from 4 guanacos, between 6 and 9 years old, using electroejaculation. In Experiment 1, to establish a positive control for the stain, equal quantities of 1% dithiothreitol (DTT) and raw semen were incubated at room temperature for 30 s, 1.5 min, and 3 min. After incubation, smears were made and then dried, to avoid continuing the reaction, and finally were stained with 0.02% TB. A split-plot design was used with time as the splitting factor and considering the males as a block. In Experiment 2, raw semen was divided into 2 aliquots, one diluted 4 : 1 in 0.1% collagenase in HEPES-TALP-BSA medium and the other left without enzyme. Both aliquots were incubated 4 min at 37°C and, after centrifugation to remove the enzyme, smears were made and stained with TB. Spermatozoa were classified according to the degree of chromatin decondensation. Analysis of variance was performed using the males as a blocking factor and the treatment as a fixed factor. According to the degree of chromatin decondensation, three patterns of staining with TB were observed: light blue (negative, without alteration of chromatin condensation), light violet (intermediate, some degree of decondensation), and dark violet (positive, high degree of decondensation). A significant increase (P < 0.05) of sperm with highly decondensed chromatin was observed in semen incubated for 3 min with DTT when compared to 30 s of incubation. Therefore, 3 min of incubation with DTT was chosen as the positive control for Experiment 2. No significant differences in any of the 3 patterns of TB staining were observed between semen incubated with or without 0.1% collagenase. In conclusion, it is possible to use TB to evaluate the degree of chromatin decondensation in guanaco spermatozoa and to use DTT as a positive control for the stain. Treatment of guanaco semen with 0.1% collagenase did not affect sperm chromatin condensation; therefore, this enzyme can be used to decrease semen viscosity and aid handling in the laboratory.

Establishing a minimum postmortem interval of human remains in an advanced state of skeletonization using the growth rate of bryophytes and plant roots

This paper illustrates the usefulness and efficiency of botanical evidence in establishing a minimum postmortem interval (PMI). The case under analysis refers to the remains of an adult male in an advanced state of skeletonization recovered from a wooded area in northern Portugal. The skeleton showed several taphonomical changes, which included the presence of green algae, bryophytes, and growing shrub roots in, around, and through the remains. By determining the age of both the bryophytes and shrub roots, it was concluded that the minimum amount of time elapsed since death was 3 years, to which several months or a few years have to be added to account for the complete decomposition of the remains. The disappearance of the presumptive individual had occurred 6 years before and is fully consistent with the estimate of the PMI. This report illustrates a novel use of bryophytes in a forensic setting.

The Cosmic Silence experiment: on the putative adaptive role of environmental ionizing radiation

Previously we reported that yeast and Chinese hamster V79 cells cultured under reduced levels of background environmental ionizing radiation show enhanced susceptibility to damage caused by acute doses of genotoxic agents. Reduction of environmental radiation dose rate was achieved by setting up an underground laboratory at Laboratori Nazionali del Gran Sasso, central Italy. We now report on the extension of our studies to a human cell line. Human lymphoblastoid TK6 cells were maintained under identical in vitro culture conditions for six continuous months, at different environmental ionizing radiation levels. Compared to "reference" environmental radiation conditions, we found that cells cultured in the underground laboratories were more sensitive to acute exposures to radiation, as measured both at the level of DNA damage and oxidative metabolism. Our results are compatible with the hypothesis that ultra-low dose rate ionizing radiation, i.e. environmental radiation, may act as a conditioning agent in the radiation-induced adaptive response.

Nutritional and management strategies on nitrogen and phosphorus use efficiency of lactating dairy cattle on commercial farms: an environmental perspective

Dairy farm activities contribute to environmental pollution through the surplus N and P that they produce. Optimization of animal feeding and management has been described as a key strategy for decreasing N and P excretion in manure. Sixty-four commercial dairy farms were studied to assess the efficiency of N and P use in lactating herds and to identify dietary and management factors that may contribute to improving the efficiency of nutrient use for milk production, and decrease N and P excretion. The average ration was formulated to 50:50 forage:concentrate ratio with grass silage and corn silage as the main forage sources. Mean N and P intakes were 562 g/d [16.4% crude protein (CP)] and 84.8 g/d (0.40% P), respectively. Milk yield averaged 29.7 kg/d and contributed to 25.8% (standard deviation +/- 2.9) of N utilization efficiency (NUE) and 31.9% (standard deviation +/- 4.5) of P utilization efficiency (PUE). Dietary N manipulation through fitting the intake of CP to animal requirements showed a better response in terms of decreasing N excretion (R(2) = 0.70) than that estimated for P nutrition and excretion (R(2) = 0.30). Improvement in NUE helped increase PUE, despite the widespread use of feedstuffs with a high P content. Management strategies for lactating herds, such as the use of different feeding groups, periodical ration reformulation, and selection of feeding system did not show any consistent response in terms of improved NUE and PUE. The optimization of NUE and PUE contributed to decreasing the N and P excretion per unit of milk produced, and therefore, reductions in N and P excretion of between 17 and 35%, respectively, were estimated. Nevertheless, nutritional and herd management strategies were limited when N and P excretion were considered in relation to the whole lactating herd and farmland availability. Dietary CP manipulation was estimated to decrease herd N excretion by 11% per hectare, whereas dietary P manipulation would be decreased by no more than 17%. We conclude that the correct match between the ingested and required N and P, together with an increase in milk productivity, may be feasible strategies for decreasing N and P excretion by lactating herds on commercial farms.

Effect of N-(n-butyl) thiophosphoric triamide and 3,4 dimethylpyrazole phosphate on gaseous emissions from grasslands under different soil water contents

The intensification of grassland systems is leading to serious environmental risks due to the large input of nitrogen (N) in fertilizers and the subsequent gaseous losses. Addition of nitrification inhibitors (NI) or urease activity inhibitors to fertilizers could reduce these losses to the atmosphere. In the present study, the effects of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) and the urease activity inhibitor N-(n-butyl) thiophosphoric triamide (NBPT) were evaluated on NH3, N2O, NO, and CO2 emissions. Ammonium sulphate nitrate (ASN), urea and cattle slurry were applied at a rate of 70 kg N ha(-1) to a mixed clover-ryegrass sward in the Basque Country (northern Spain) under different soil water contents. NH3 and NO emissions were determined by photoacoustic and chemiluminescence respectively using an open chamber technique while N2O and CO2 emissions were measured by photoacoustic using a closed chamber technique. When the water filled pore space (WFPS) was under 60%, the application of NBPT reduced NO emissions a 34% on urea and an 18% on slurry, and the application of DMPP reduced them a 2% on ASN and a 4% on slurry. No significant effect was observed on NH3 losses. When WFPS was over 60%, no effect could be observed on NO and N2O emissions after the application of both inhibitors, but NH3 losses were reduced a 31% by NBPT when applied with the slurry. Carbon dioxide emissions were unaffected by the use of DMPP or NBPT at any soil water content. Neither grassland yield nor herbage N concentration were influenced by the application of both inhibitors.

Agriculture and the new challenges for photosynthesis research

A rising human population and changing patterns of land use mean that world food production rates will need to be increased by at least 50% by 2050, a massive rise in harvestable yield per hectare of the major crops such as rice (Oryza sativa) and wheat (Triticum aestivum). Combinations of breeding for improved morphology-related traits such as harvest index and increased inputs of water and fertilizer, which have sustained yield increases since the 1960s, will be neither sufficient nor sustainable. An important limiting factor will be the capacity to produce sufficient biomass during favourable growing periods. Here we analyse this problem in the context of increasing the efficiency of conversion of solar energy into biomass, that is, leaf and canopy photosynthesis. Focussing on crops carrying out C3 photosynthesis, we analyse the evidence for 'losses' in the process of conversion of solar energy into crop biomass and we explore novel mechanisms of improving biomass production rates, which have arisen from recent research into the fundamental primary processes of photosynthesis and carbohydrate metabolism. We show that there are several lines of evidence that these processes are not fully optimized for maximum yield. We put forward the hypothesis that the chloroplast itself should be given greater prominence as a sensor, processor and integrator of highly variable environmental signals to allow a more efficient transduction of energy supply into biomass production.

Monitoring heavy metal concentrations in leachates from a forest soil subjected to repeated applications of sewage sludge

The aim of the study was to establish whether the repeated application of sewage sludge to an acid forest soil (Dystric Cambisol) would lead to short-term groundwater contamination. Sludge was applied at four loading rates (0, 2.4, 17 and 60 Mg ha(-1)) in two consecutive years and leachates were analysed. Heavy metal inputs to soils at the lowest dose were below EC regulations but, at higher doses, limits for Zn, Cd, Cr and Ni were exceeded. Repeated application of sludge at 60 Mg ha(-1) resulted in significantly (P<0.05) higher concentrations of Zn, Cd, Cr and Ni in the leachates than with other treatments. The drinking water standards for Cd and Ni were surpassed in all treatments. Control plots were contaminated by groundwater flow despite the existence of buffer zones between plots. This complicated interpretation of the results, highlighting the importance of careful design of this type of experiment.

Degeneration of non-fused segments after floating lumbar fusion

Degeneration of the disc or discs between two fused spinal segments has been termed "floating disc disease". The purpose of this retrospective study was to show the radiological evolution of the floating disc(s) and the relationship between floating disc degeneration and segmental lordosis, lumbar lordosis and pelvic incidence. Twenty patients, with a mean age of 49.9 years, with symptomatic lumbar degenerative disc disease or low grade spondylolisthesis, who failed non-operative treatment and underwent fusion of 2 or more noncontiguous spinal segments, were included in this study. The radiographs of the floating discs were graded with the modified Gore System. The mean follow-up was 4.2 years. Forty-seven levels were fused and 27 floating discs were studied (13 single, 7 double). Five out of 27 floating discs (18%), in 4 patients, progressively degenerated. None of the floating discs degenerated more than two radiographic grades and none needed additional surgery. Postoperatively, 3 out of 5 degenerated floating discs had decreased segmental lordosis, while the other two had no change; this difference was not significant (p = 0.08). Neither was there any significant correlation between floating disc degeneration and lumbar lordosis L1-S1 (p > 0.10) or pelvic incidence (p > 0.10). This study shows that the effect of floating fusion on floating discs is the same as the effect of a contiguous fusion on adjacent discs.