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Capone M, Romanelli M, Castaldo D, Parolin G, Bello A, Gil G, Vanzan M. A Vision for the Future of Multiscale Modeling. ACS PHYSICAL CHEMISTRY AU 2024; 4:202-225. [PMID: 38800726 PMCID: PMC11117712 DOI: 10.1021/acsphyschemau.3c00080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 01/31/2024] [Accepted: 02/01/2024] [Indexed: 05/29/2024]
Abstract
The rise of modern computer science enabled physical chemistry to make enormous progresses in understanding and harnessing natural and artificial phenomena. Nevertheless, despite the advances achieved over past decades, computational resources are still insufficient to thoroughly simulate extended systems from first principles. Indeed, countless biological, catalytic and photophysical processes require ab initio treatments to be properly described, but the breadth of length and time scales involved makes it practically unfeasible. A way to address these issues is to couple theories and algorithms working at different scales by dividing the system into domains treated at different levels of approximation, ranging from quantum mechanics to classical molecular dynamics, even including continuum electrodynamics. This approach is known as multiscale modeling and its use over the past 60 years has led to remarkable results. Considering the rapid advances in theory, algorithm design, and computing power, we believe multiscale modeling will massively grow into a dominant research methodology in the forthcoming years. Hereby we describe the main approaches developed within its realm, highlighting their achievements and current drawbacks, eventually proposing a plausible direction for future developments considering also the emergence of new computational techniques such as machine learning and quantum computing. We then discuss how advanced multiscale modeling methods could be exploited to address critical scientific challenges, focusing on the simulation of complex light-harvesting processes, such as natural photosynthesis. While doing so, we suggest a cutting-edge computational paradigm consisting in performing simultaneous multiscale calculations on a system allowing the various domains, treated with appropriate accuracy, to move and extend while they properly interact with each other. Although this vision is very ambitious, we believe the quick development of computer science will lead to both massive improvements and widespread use of these techniques, resulting in enormous progresses in physical chemistry and, eventually, in our society.
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Affiliation(s)
- Matteo Capone
- Department
of Physical and Chemical Sciences, University
of L’Aquila, L’Aquila 67010, Italy
| | - Marco Romanelli
- Department
of Chemical Sciences, University of Padova, Padova 35131, Italy
| | - Davide Castaldo
- Department
of Chemical Sciences, University of Padova, Padova 35131, Italy
| | - Giovanni Parolin
- Department
of Chemical Sciences, University of Padova, Padova 35131, Italy
| | - Alessandro Bello
- Department
of Chemical Sciences, University of Padova, Padova 35131, Italy
- Department
of Physics, Informatics and Mathematics, University of Modena and Reggio Emilia, Modena 41125, Italy
| | - Gabriel Gil
- Department
of Chemical Sciences, University of Padova, Padova 35131, Italy
- Instituto
de Cibernética, Matemática y Física (ICIMAF), La Habana 10400, Cuba
| | - Mirko Vanzan
- Department
of Chemical Sciences, University of Padova, Padova 35131, Italy
- Department
of Physics, University of Milano, Milano 20133, Italy
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2
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Manohar EM, Dhandapani HN, Roy S, Pełka R, Rams M, Konieczny P, Tothadi S, Kundu S, Dey A, Das S. Tetranuclear Co II4O 4 Cubane Complex: Effective Catalyst Toward Electrochemical Water Oxidation. Inorg Chem 2024; 63:4883-4897. [PMID: 38494956 DOI: 10.1021/acs.inorgchem.3c03956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
Abstract
The reaction of Co(OAc)2·6H2O with 2,2'-[{(1E,1'E)-pyridine-2,6-diyl-bis(methaneylylidene)bis(azaneylylidene)}diphenol](LH2) a multisite coordination ligand and Et3N in a 1:2:3 stoichiometric ratio forms a tetranuclear complex Co4(L)2(μ-η1:η1-OAc)2(η2-OAc)2]· 1.5 CH3OH· 1.5 CHCl3 (1). Based on X-ray diffraction investigations, complex 1 comprises a distorted Co4O4 cubane core consisting of two completely deprotonated ligands [L]2- and four acetate ligands. Two distinct types of CoII centers exist in the complex, where the Co(2) center has a distorted octahedral geometry; alternatively, Co(1) has a distorted pentagonal-bipyramidal geometry. Analysis of magnetic data in 1 shows predominant antiferromagnetic coupling (J = -2.1 cm-1), while the magnetic anisotropy is the easy-plane type (D1 = 8.8, D2 = 0.76 cm-1). Furthermore, complex 1 demonstrates an electrochemical oxygen evolution reaction (OER) with an overpotential of 325 mV and Tafel slope of 85 mV dec-1, required to attain a current density of 10 mA cm-2 and moderate stability under alkaline conditions (pH = 14). Electrochemical impedance spectroscopy studies reveal that compound 1 has a charge transfer resistance (Rct) of 2.927 Ω, which is comparatively lower than standard Co3O4 (5.242 Ω), indicating rapid charge transfer kinetics between electrode and electrolyte solution that enhances higher catalytic activity toward OER kinetics.
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Affiliation(s)
- Ezhava Manu Manohar
- Department of Basic Sciences, Chemistry Discipline, Institute of Infrastructure, Technology, Research, and Management, Near Khokhra Circle, Maninagar East, Ahmedabad, Gujarat 380026, India
| | - Hariharan N Dhandapani
- Electrochemical Process Engineering (EPE) Division, CSIR-Central Electrochemical Research Institute (CECRI), Karaikudi, Tamil Nadu 630003, India
| | - Soumalya Roy
- Department of Basic Sciences, Chemistry Discipline, Institute of Infrastructure, Technology, Research, and Management, Near Khokhra Circle, Maninagar East, Ahmedabad, Gujarat 380026, India
| | - Robert Pełka
- Institute of Nuclear Physics, Polish Academy of Sciences, Radzikowskiego 152, Krakow PL-31342, Poland
| | - Michał Rams
- Institute of Physics, Jagiellonian University, Łojasiewicza 11, Kraków 30348, Poland
| | - Piotr Konieczny
- Institute of Nuclear Physics, Polish Academy of Sciences, Radzikowskiego 152, Krakow PL-31342, Poland
| | - Srinu Tothadi
- Analytical and Environmental Sciences Division and Centralized Instrumentation Facility, CSIR-Central Salt and Marine Chemicals Research Institute, Gijubhai Badheka Marg, Bhavnagar 364002, India
| | - Subrata Kundu
- Electrochemical Process Engineering (EPE) Division, CSIR-Central Electrochemical Research Institute (CECRI), Karaikudi, Tamil Nadu 630003, India
| | - Atanu Dey
- Department of Chemistry, Gandhi Institute of Technology and Management (GITAM), NH 207, Nagadenehalli, Doddaballapur Taluk, Bengaluru, Karnataka 561203, India
| | - Sourav Das
- Department of Basic Sciences, Chemistry Discipline, Institute of Infrastructure, Technology, Research, and Management, Near Khokhra Circle, Maninagar East, Ahmedabad, Gujarat 380026, India
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3
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Mu G, Gaynor RB, McIntyre BN, Donnadieu B, Creutz SE. Synthesis and Characterization of Bipyridyl-(Imidazole) n Mn(II) Compounds and Their Evaluation as Potential Precatalysts for Water Oxidation. Molecules 2023; 28:7221. [PMID: 37894706 PMCID: PMC10608871 DOI: 10.3390/molecules28207221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 10/20/2023] [Accepted: 10/21/2023] [Indexed: 10/29/2023] Open
Abstract
Metalloenzymes make extensive use of manganese centers for oxidative catalysis, including water oxidation; the need to develop improved synthetic catalysts for these processes has long motivated the development of bioinspired manganese complexes. Herein, we report a series of bpy-(imidazole)n (n = 1 or 2) (bpy = 2,2'-bipyridyl) ligands and their Mn2+ complexes. Four Mn2+ complexes are structurally characterized using single-crystal X-ray diffraction, revealing different tridentate and tetradentate ligand coordination modes. Cyclic voltammetry of the complexes is consistent with ligand-centered reductions and metal-centered oxidations, and UV-vis spectroscopy complemented by TD-DFT calculations shows primarily ligand-centered transitions with minor contributions from charge-transfer type transitions at higher energies. In solution, ESI-MS studies provide evidence for ligand reorganization, suggesting complex speciation behavior. The oxidation of the complexes in the presence of water is probed using cyclic voltammetry, but the low stability of the complexes in aqueous solution leads to decomposition and precludes their ultimate application as aqueous electrocatalysts. Possible reasons for the low stability and suggestions for improvement are discussed.
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Affiliation(s)
| | | | | | | | - Sidney E. Creutz
- Department of Chemistry, Mississippi State University, Mississippi State, Starkville, MS 39762, USA; (G.M.); (R.B.G.); (B.N.M.); (B.D.)
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4
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Ganesh I. EPDM rubber-based membranes for electrochemical water splitting and carbon dioxide reduction reactions. J Solid State Electrochem 2023. [DOI: 10.1007/s10008-023-05479-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023]
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5
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Barrio J, Pedersen A, Favero S, Luo H, Wang M, Sarma SC, Feng J, Ngoc LTT, Kellner S, Li AY, Jorge Sobrido AB, Titirici MM. Bioinspired and Bioderived Aqueous Electrocatalysis. Chem Rev 2023; 123:2311-2348. [PMID: 36354420 PMCID: PMC9999430 DOI: 10.1021/acs.chemrev.2c00429] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Indexed: 11/12/2022]
Abstract
The development of efficient and sustainable electrochemical systems able to provide clean-energy fuels and chemicals is one of the main current challenges of materials science and engineering. Over the last decades, significant advances have been made in the development of robust electrocatalysts for different reactions, with fundamental insights from both computational and experimental work. Some of the most promising systems in the literature are based on expensive and scarce platinum-group metals; however, natural enzymes show the highest per-site catalytic activities, while their active sites are based exclusively on earth-abundant metals. Additionally, natural biomass provides a valuable feedstock for producing advanced carbonaceous materials with porous hierarchical structures. Utilizing resources and design inspiration from nature can help create more sustainable and cost-effective strategies for manufacturing cost-effective, sustainable, and robust electrochemical materials and devices. This review spans from materials to device engineering; we initially discuss the design of carbon-based materials with bioinspired features (such as enzyme active sites), the utilization of biomass resources to construct tailored carbon materials, and their activity in aqueous electrocatalysis for water splitting, oxygen reduction, and CO2 reduction. We then delve in the applicability of bioinspired features in electrochemical devices, such as the engineering of bioinspired mass transport and electrode interfaces. Finally, we address remaining challenges, such as the stability of bioinspired active sites or the activity of metal-free carbon materials, and discuss new potential research directions that can open the gates to the implementation of bioinspired sustainable materials in electrochemical devices.
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Affiliation(s)
- Jesús Barrio
- Department
of Materials, Royal School of Mines, Imperial
College London, LondonSW7 2AZ, England, U.K.
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Angus Pedersen
- Department
of Materials, Royal School of Mines, Imperial
College London, LondonSW7 2AZ, England, U.K.
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Silvia Favero
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Hui Luo
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Mengnan Wang
- Department
of Materials, Royal School of Mines, Imperial
College London, LondonSW7 2AZ, England, U.K.
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Saurav Ch. Sarma
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Jingyu Feng
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
- School
of Engineering and Materials Science, Queen
Mary University of London, LondonE1 4NS, England, U.K.
| | - Linh Tran Thi Ngoc
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
- School
of Engineering and Materials Science, Queen
Mary University of London, LondonE1 4NS, England, U.K.
| | - Simon Kellner
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Alain You Li
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
| | - Ana Belén Jorge Sobrido
- School
of Engineering and Materials Science, Queen
Mary University of London, LondonE1 4NS, England, U.K.
| | - Maria-Magdalena Titirici
- Department
of Chemical Engineering, Imperial College
London, LondonSW7 2AZ, England, U.K.
- Advanced
Institute for Materials Research (WPI-AIMR), Tohoku University, 2-1-1
Katahira, Aobaku, Sendai, Miyagi980-8577, Japan
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6
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Chiariello M, Grünewald F, Zarmiento-Garcia R, Marrink SJ. pH-Dependent Conformational Switch Impacts Stability of the PsbS Dimer. J Phys Chem Lett 2023; 14:905-911. [PMID: 36662680 PMCID: PMC9900633 DOI: 10.1021/acs.jpclett.2c03760] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2022] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
The photosystem II PsbS protein triggers the photoprotective mechanism of plants by sensing the acidification of the thylakoid lumen. Despite the mechanism of action of PsbS would require a pH-dependent monomerization of the dimeric form, a clear connection between the pH-induced structural changes and the dimer stability is missing. Here, by applying constant pH coarse-grained and all-atom molecular dynamics simulations, we investigate the pH-dependent structural response of the PsbS dimer. We find that the pH variation leads to structural changes in the lumen-exposed helices, located at the dimeric interface, providing an effective switch between PsbS inactive and active form. Moreover, the monomerization free energies reveal that in the neutral pH conformation, where the network of H-bond interactions at the dimeric interface is destroyed, the protein-protein interaction is weaker. Our results show how the pH-dependent conformations of PsbS affect their dimerization propensity, which is at the basis of the photoprotective mechanism.
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Affiliation(s)
| | | | - Rubi Zarmiento-Garcia
- Groningen
Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 4, 9747
AG Groningen, The Netherlands
| | - Siewert J. Marrink
- Groningen
Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 4, 9747
AG Groningen, The Netherlands
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7
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San Esteban ACM, Kuwamura N, Yoshinari N, Konno T. Serendipitous formation of oxygen-bridged CuII6M (M = Mn II, Co II) double cubanes showing electrocatalytic water oxidation. Chem Commun (Camb) 2022; 58:4192-4195. [PMID: 35274119 DOI: 10.1039/d1cc07199h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydroxido-bridged CuII6M double-cubane clusters (M = MnII, CoII) supported by D-penicillaminedisulfide were unexpectedly formed by treating a D-penicillaminato CuII2PtII2 complex with MBr2 in water. The clusters displayed heterogeneous electrocatalytic activities for water oxidation dependent on the central M shared by two CuII cubane units.
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Affiliation(s)
| | - Naoto Kuwamura
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
| | - Nobuto Yoshinari
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
| | - Takumi Konno
- Department of Chemistry, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
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8
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Wang L, Li J, Zhang S. A Comprehensive Network Integrating Signature Microbes and Crucial Soil Properties During Early Biological Soil Crust Formation on Tropical Reef Islands. Front Microbiol 2022; 13:831710. [PMID: 35369528 PMCID: PMC8969229 DOI: 10.3389/fmicb.2022.831710] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Accepted: 02/15/2022] [Indexed: 11/26/2022] Open
Abstract
Biological soil crusts (BSCs/biocrusts), which are distributed across various climatic zones and well-studied in terrestrial drylands, harbor polyextremotolerant microbial topsoil communities and provide ecological service for local and global ecosystem. Here, we evaluated BSCs in the tropical reef islands of the South China Sea. Specifically, we collected 41 BSCs, subsurface, and bare soil samples from the Xisha and Nansha Archipelagos. High-throughput amplicon sequencing was performed to analyze the bacterial, fungal, and archaeal compositions of these samples. Physicochemical measurement and enzyme activity assays were conducted to characterize the soil properties. Advanced computational analysis revealed 47 biocrust-specific microbes and 10 biocrust-specific soil properties, as well as their correlations in BSC microbial community. We highlighted the previously underestimated impact of manganese on fungal community regulation and BSC formation. We provide comprehensive insight into BSC formation networks on tropical reef islands and established a foundation for BSC-directed environmental restoration.
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Affiliation(s)
- Lin Wang
- CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
| | - Jie Li
- CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
- Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou, China
- *Correspondence: Jie Li,
| | - Si Zhang
- CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
- Innovation Academy of South China Sea Ecology and Environmental Engineering, Chinese Academy of Sciences, Guangzhou, China
- Si Zhang,
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9
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Bigness A, Vaddypally S, Zdilla MJ, Mendoza-Cortes JL. Ubiquity of cubanes in bioinorganic relevant compounds. Coord Chem Rev 2022. [DOI: 10.1016/j.ccr.2021.214168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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10
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Hosseinmardi S, Scheurer A, Heinemann FW, Kuepper K, Senft L, Waldschmidt P, Ivanović‐Burmazović I, Meyer K. Evaluation of Manganese Cubanoid Clusters for Water Oxidation Catalysis: From Well-Defined Molecular Coordination Complexes to Catalytically Active Amorphous Films. CHEMSUSCHEM 2021; 14:4741-4751. [PMID: 34409745 PMCID: PMC8596818 DOI: 10.1002/cssc.202101451] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Revised: 08/17/2021] [Indexed: 06/05/2023]
Abstract
With a view to developing multimetallic molecular catalysts that mimic the oxygen-evolving catalyst (OEC) in Nature's photosystem II, the synthesis of various dicubanoid manganese clusters is described and their catalytic activity investigated for water oxidation in basic, aqueous solution. Pyridinemethanol-based ligands are known to support polynuclear and cubanoid structures in manganese coordination chemistry. The chelators 2,6-pyridinedimethanol (H2 L1 ) and 6-methyl-2-pyridinemethanol (HL2 ) were chosen to yield polynuclear manganese complexes; namely, the tetranuclear defective dicubanes [MnII 2 MnIII 2 (HL1 )4 (OAc)4 (OMe)2 ] and [MnII 2 MnIII 2 (HL1 )6 (OAc)2 ] (OAc)2 ⋅2 H2 O, as well as the octanuclear-dicubanoid [MnII 6 MnIII 2 (L2 )4 (O)2 (OAc)10 (HOMe/OH2 )2 ]⋅3MeOH⋅MeCN. In freshly prepared solutions, polynuclear species were detected by electrospray ionization mass spectrometry, whereas X-band electron paramagnetic resonance studies in dilute, liquid solution suggested the presence of divalent mononuclear Mn species with g values of 2. However, the magnetochemical investigation of the complexes' solutions by the Evans technique confirmed a haphazard combination of manganese coordination complexes, from mononuclear to polynuclear species. Subsequently, the newly synthesized and characterized manganese molecular complexes were employed as precursors to prepare electrode-deposited films in a buffer-free solution to evaluate and compare their stability and catalytic activity for water oxidation electrocatalysis.
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Affiliation(s)
- Soosan Hosseinmardi
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
| | - Andreas Scheurer
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
| | - Frank W. Heinemann
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
| | - Karsten Kuepper
- Department of PhysicsUniversity of OsnabrückBarbarastraße 749069OsnabrückGermany
| | - Laura Senft
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
- Present address: Department of ChemistryLudwig-Maximilians-Universität MünchenButenandtstraße 5–1381377MunichGermany
| | - Pablo Waldschmidt
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
| | - Ivana Ivanović‐Burmazović
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
- Present address: Department of ChemistryLudwig-Maximilians-Universität MünchenButenandtstraße 5–1381377MunichGermany
| | - Karsten Meyer
- Department of Chemistry and PharmacyInorganic ChemistryFriedrich-Alexander-Universität Erlangen-Nürnberg (FAU)Egerlandstraße 191058ErlangenGermany
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Kimura H, Nagasato N, Kato N, Kojima M, Enomoto C, Nakata E, Takashima H. Photophysical and elecron-transfer reaction properties of tris(2,2’-bipyridine)ruthenium(II)-based inhibitors that covalently bound to the active site of chymotrypsin. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY 2021. [DOI: 10.1016/j.jpap.2021.100027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
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12
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Tan X, Dai K, Parajuli K, Hang X, Duan Z, Hu Y. Effects of Phenolic Pollution on Interspecific Competition between Microcystis aeruginosa and Chlorella pyrenoidosa and their Photosynthetic Responses. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2019; 16:ijerph16203947. [PMID: 31627270 PMCID: PMC6843285 DOI: 10.3390/ijerph16203947] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/13/2019] [Revised: 09/23/2019] [Accepted: 09/30/2019] [Indexed: 11/18/2022]
Abstract
The demand for phenolic compounds has been increasing rapidly, which has intensified the production and usage of phenol at a commercial scale. In some polluted water bodies, phenol has become one of the typical aromatic contaminants. Such water bodies are inescapably influenced by nutrients from human activities, and also suffer from nuisance cyanobacterial blooms. While phenolic pollution threatens water safety and ecological balance, algal cells are ubiquitous and sensitive to pollutants. Therefore, effects of phenolic pollution on interspecific competition between a bloom-forming cyanobacterium and other common alga merit quantitative investigation. In this study, the effects of phenol on Microcystis aeruginosa (M. aeruginosa, a bloom-forming cyanobacterium) and Chlorella pyrenoidosa (C. pyrenoidosa, a ubiquitous green alga) were analyzed in mono- and co-cultures. The two species were exposed to a series of phenol treatments (0, 2, 20, and 200 μg mL−1). Population dynamics were measured by a flow cytometer and analyzed by the Lotka-Volterra model. The results showed that M. aeruginosa was more sensitive to phenol (EC50 = 80.8 ± 0.16 μg mL−1) compared to C. pyrenoidosa (EC50 = 631.4 ± 0.41 μg mL−1) in mono-cultures. M. aeruginosa won in the co-cultures when phenol was below or equal to 20 μg mL−1, while C. pyrenoidosa became the dominant species in the 200 μg mL−1 treatment. Photosynthetic activity was measured by a fluometer. Results showed phenol significantly impacted the photosynthetic activity of M. aeruginosa by inhibiting the acceptor side of its photosystem II (PSII), while such inhibition in C. pyrenoidosa was only observed in the highest phenol treatment (200 μg mL−1). This study provides a better understanding for predicting the succession of algal community structure in water bodies susceptible to phenolic contamination. Moreover, it reveals the mechanism on photosynthetic responses of these two species under phenolic stress.
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Affiliation(s)
- Xiao Tan
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China.
| | - Kaiwen Dai
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China.
| | - Keshab Parajuli
- School of Population and Global Health, Faculty of Medicine, Denistry and Health Sciences, The University of Melbourne, VIC 3010 Melbourne, Australia.
| | - Xiaoshuai Hang
- Nanjing Institute of Environmental Sciences, Ministry of Ecology and Environment, Nanjing 210042, China.
| | - Zhipeng Duan
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China.
| | - Yue Hu
- Key Laboratory of Integrated Regulation and Resource Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, Nanjing 210098, China.
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13
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Pathak S, Ghosh MK, Mandal M, Mandal V, Bhattacharyya A, Ghorai TK. Synthesis of a new acetate bridged Cu(ii) building block generated 1D polymer and studies on structural, magnetic, antibacterial and anticancer properties. NEW J CHEM 2019. [DOI: 10.1039/c8nj04937h] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Novel 1D polymer of formula [Cu3(Py)6(μ-CH3COO)4(I3)2]n having asymmetric unit {[Cu0.75(CH3COO)1(Py)1.5]·(I3)0.5}n and S = 1/2 shows bacterial growth inhibition and ROS mediated chemotherapy.
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Affiliation(s)
| | - Mithun K. Ghosh
- Department of Chemistry
- Indira Gandhi National Tribal University
- Amarkantak
- India
| | - Manab Mandal
- Department of Botany
- University of GourBanga
- Mokdumpur
- Malda
- India
| | | | - Arnab Bhattacharyya
- Department of Inorganic & Physical Chemistry
- Indian Institute of Science
- India
| | - Tanmay K. Ghorai
- Department of Chemistry
- University of GourBanga
- Malda
- India
- Department of Chemistry
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14
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Copper oxide nanosheets prepared by molten salt method for efficient electrocatalytic oxygen evolution reaction with low catalyst loading. Electrochim Acta 2018. [DOI: 10.1016/j.electacta.2018.01.053] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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15
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Singh A, Trivedi M, Singh P, Kociok-Köhn G, Azad UP, Singh AK, Kumar A. Copper(i) tertiary phosphine xanthate complexes as single source precursors for copper sulfide and their application in the OER. NEW J CHEM 2018. [DOI: 10.1039/c8nj03992e] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Three heteroleptic bis(triphenylphosphine)copper(i) methyl pyridyl xanthate complexes used as single source precursors for copper sulfide and the resulting copper sulfides have been utilized for the electrocatalytic oxygen evolution reaction.
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Affiliation(s)
- Amita Singh
- Department of Chemistry
- Faculty of Science
- University of Lucknow
- Lucknow 226 007
- India
| | - Manoj Trivedi
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Pooja Singh
- Department of Chemistry
- Faculty of Science
- University of Lucknow
- Lucknow 226 007
- India
| | - Gabriele Kociok-Köhn
- Chemical Characterisation and Analysis Facility (CCAF)
- University of Bath
- Bath BA2 7AY
- UK
| | - Uday Pratap Azad
- School of Materials Science and Technology
- Indian Institute of Technology
- BHU
- Varanasi
- India
| | - Ashish Kumar Singh
- School of Materials Science and Technology
- Indian Institute of Technology
- BHU
- Varanasi
- India
| | - Abhinav Kumar
- Department of Chemistry
- Faculty of Science
- University of Lucknow
- Lucknow 226 007
- India
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16
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Najafpour MM, Madadkhani S, Akbarian S, Zand Z, Hołyńska M, Kompany-Zareh M, Tatsuya T, Singh JP, Chae KH, Allakhverdiev SI. Links between peptides and Mn oxide: nano-sized manganese oxide embedded in a peptide matrix. NEW J CHEM 2018. [DOI: 10.1039/c8nj02119h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report on a poly-peptide/Mn oxide nanocomposite as a model for the water-oxidizing catalyst in Photosystem II.
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Affiliation(s)
- Mohammad Mahdi Najafpour
- Department of Chemistry
- Institute for Advanced Studies in Basic Sciences (IASBS)
- Zanjan
- Iran
- Center of Climate Change and Global Warming
| | - Sepideh Madadkhani
- Department of Chemistry
- Institute for Advanced Studies in Basic Sciences (IASBS)
- Zanjan
- Iran
| | - Somayyeh Akbarian
- Department of Chemistry
- Institute for Advanced Studies in Basic Sciences (IASBS)
- Zanjan
- Iran
| | - Zahra Zand
- Department of Chemistry
- Institute for Advanced Studies in Basic Sciences (IASBS)
- Zanjan
- Iran
| | - Małgorzata Hołyńska
- Fachbereich Chemie und Wissenschaftliches Zentrum für Materialwissenschaften (WZMW)
- Philipps-Universität Marburg
- Marburg D-35032
- Germany
| | - Mohsen Kompany-Zareh
- Department of Chemistry
- Institute for Advanced Studies in Basic Sciences (IASBS)
- Zanjan
- Iran
- Center of Climate Change and Global Warming
| | - Tomo Tatsuya
- Department of Biology
- Faculty of Science
- Tokyo University of Science
- Tokyo 162-8601
- Japan
| | - Jitendra Pal Singh
- Advanced Analysis Center
- Korea Institute of Science and Technology
- Seoul 02792
- Republic of Korea
| | - Keun Hwa Chae
- Advanced Analysis Center
- Korea Institute of Science and Technology
- Seoul 02792
- Republic of Korea
| | - Suleyman I. Allakhverdiev
- Controlled Photobiosynthesis Laboratory
- Institute of Plant Physiology
- Russian Academy of Sciences
- Moscow 127276
- Russia
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17
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Möller F, Piontek S, Miller RG, Apfel UP. From Enzymes to Functional Materials-Towards Activation of Small Molecules. Chemistry 2017; 24:1471-1493. [PMID: 28816379 DOI: 10.1002/chem.201703451] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2017] [Revised: 08/15/2017] [Indexed: 12/12/2022]
Abstract
The design of non-noble metal-containing heterogeneous catalysts for the activation of small molecules is of utmost importance for our society. While nature possesses very sophisticated machineries to perform such conversions, rationally designed catalytic materials are rare. Herein, we aim to raise the awareness of the overall common design and working principles of catalysts incorporating aspects of biology, chemistry, and material sciences.
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Affiliation(s)
- Frauke Möller
- Inorganic Chemistry I/ Bioinorganic Chemistry, Ruhr-University Bochum, Universitätsstaße 150, 44801, Bochum, Germany
| | - Stefan Piontek
- Inorganic Chemistry I/ Bioinorganic Chemistry, Ruhr-University Bochum, Universitätsstaße 150, 44801, Bochum, Germany
| | - Reece G Miller
- Inorganic Chemistry I/ Bioinorganic Chemistry, Ruhr-University Bochum, Universitätsstaße 150, 44801, Bochum, Germany
| | - Ulf-Peter Apfel
- Inorganic Chemistry I/ Bioinorganic Chemistry, Ruhr-University Bochum, Universitätsstaße 150, 44801, Bochum, Germany
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18
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Electrocatalytic water oxidation by a nickel oxide film derived from a molecular precursor. CHINESE JOURNAL OF CATALYSIS 2017. [DOI: 10.1016/s1872-2067(17)62921-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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19
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Mishanin VI, Trubitsin BV, Patsaeva SV, Ptushenko VV, Solovchenko AE, Tikhonov AN. Acclimation of shade-tolerant and light-resistant Tradescantia species to growth light: chlorophyll a fluorescence, electron transport, and xanthophyll content. PHOTOSYNTHESIS RESEARCH 2017; 133:87-102. [PMID: 28176042 DOI: 10.1007/s11120-017-0339-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Accepted: 01/13/2017] [Indexed: 06/06/2023]
Abstract
In this study, we have compared the photosynthetic characteristics of two contrasting species of Tradescantia plants, T. fluminensis (shade-tolerant species), and T. sillamontana (light-resistant species), grown under the low light (LL, 50-125 µmol photons m-2 s-1) or high light (HL, 875-1000 µmol photons m-2 s-1) conditions during their entire growth period. For monitoring the functional state of photosynthetic apparatus (PSA), we measured chlorophyll (Chl) a emission fluorescence spectra and kinetics of light-induced changes in the heights of fluorescence peaks at 685 and 740 nm (F 685 and F 740). We also compared the light-induced oxidation of P700 and assayed the composition of carotenoids in Tradescantia leaves grown under the LL and HL conditions. The analyses of slow induction of Chl a fluorescence (SIF) uncovered different traits in the LL- and HL-grown plants of ecologically contrasting Tradescantia species, which may have potential ecophysiological significance with respect to their tolerance to HL stress. The fluorometry and EPR studies of induction events in chloroplasts in situ demonstrated that acclimation of both Tradescantia species to HL conditions promoted faster responses of their PSA as compared to LL-grown plants. Acclimation of both species to HL also caused marked changes in the leaf anatomy and carotenoid composition (an increase in Violaxanthin + Antheraxantin + Zeaxanthin and Lutein pools), suggesting enhanced photoprotective capacity of the carotenoids in the plants grown in nature under high irradiance. Collectively, the results of the present work suggest that the mechanisms of long-term PSA photoprotection in Tradescantia are based predominantly on the light-induced remodeling of pigment-protein complexes in chloroplasts.
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Affiliation(s)
- Vladimir I Mishanin
- Faculty of Physics, M.V. Lomonosov Moscow State University, Moscow, 119991, Russia
| | - Boris V Trubitsin
- Faculty of Physics, M.V. Lomonosov Moscow State University, Moscow, 119991, Russia
| | - Svetlana V Patsaeva
- Faculty of Physics, M.V. Lomonosov Moscow State University, Moscow, 119991, Russia
| | - Vasily V Ptushenko
- A.N. Belozersky Institute of Physical-Chemical Biology, M.V. Lomonosov Moscow State University, Moscow, 119234, Russia
- N.M. Emanuel Institute of Biochemical Physics, Moscow, 119334, Russia
| | - Alexei E Solovchenko
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, 119234, Russia
| | - Alexander N Tikhonov
- Faculty of Physics, M.V. Lomonosov Moscow State University, Moscow, 119991, Russia.
- N.M. Emanuel Institute of Biochemical Physics, Moscow, 119334, Russia.
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20
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Yotsova EK, Stefanov MA, Dobrikova AG, Apostolova EL. Different sensitivities of photosystem II in green algae and cyanobacteria to phenylurea and phenol-type herbicides: effect on electron donor side. ACTA ACUST UNITED AC 2017; 72:315-324. [PMID: 28258977 DOI: 10.1515/znc-2016-0089] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2016] [Accepted: 02/05/2017] [Indexed: 11/15/2022]
Abstract
Abstract
The effects of short-term treatment with phenylurea (DCMU, isoproturon) and phenol-type (ioxynil) herbicides on the green alga Chlorella kessleri and the cyanobacterium Synechocystis salina with different organizations of photosystem II (PSII) were investigated using pulse amplitude modulated (PAM) chlorophyll fluorescence and photosynthetic oxygen evolution measured by polarographic oxygen electrodes (Clark-type and Joliot-type). The photosynthetic oxygen evolution showed stronger inhibition than the PSII photochemistry. The effects of the studied herbicides on both algal and cyanobacterial cells decreased in the following order: DCMU>isoproturon>ioxynil. Furthermore, we observed that the number of blocked PSII centers increased significantly after DCMU treatment (204–250 times) and slightly after ioxynil treatment (19–35 times) in comparison with the control cells. This study suggests that the herbicides affect not only the acceptor side but also the donor side of PSII by modifications of the Mn cluster of the oxygen-evolving complex. We propose that one of the reasons for the different PSII inhibitions caused by herbicides is their influence, in different extents, on the kinetic parameters of the oxygen-evolving reactions (the initial S0−S1 state distribution, the number of blocked centers SB, the turnover time of Si states, misses and double hits). The relationship between the herbicide-induced inhibition and the changes in the kinetic parameters is discussed.
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Affiliation(s)
- Ekaterina K Yotsova
- Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., Bl. 21, Sofia 1113, Bulgaria
| | - Martin A Stefanov
- Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., Bl. 21, Sofia 1113, Bulgaria
| | - Anelia G Dobrikova
- Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., Bl. 21, Sofia 1113, Bulgaria
| | - Emilia L Apostolova
- Institute of Biophysics and Biomedical Engineering, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., Bl. 21, 1113 Sofia, Bulgaria, Tel: +359-2979-2621, Fax: +359-2971-2493
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21
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Reath AH, Ziller JW, Tsay C, Ryan AJ, Yang JY. Redox Potential and Electronic Structure Effects of Proximal Nonredox Active Cations in Cobalt Schiff Base Complexes. Inorg Chem 2017; 56:3713-3718. [DOI: 10.1021/acs.inorgchem.6b03098] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Alexander H. Reath
- Department of Chemistry, University of California, Irvine, California 92697, United States
| | - Joseph W. Ziller
- Department of Chemistry, University of California, Irvine, California 92697, United States
| | - Charlene Tsay
- Department of Chemistry, University of California, Irvine, California 92697, United States
| | - Austin J. Ryan
- Department of Chemistry, University of California, Irvine, California 92697, United States
| | - Jenny Y. Yang
- Department of Chemistry, University of California, Irvine, California 92697, United States
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22
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23
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Majumder S, Abdel Haleem A, Nagaraju P, Naruta Y. A new preparation of a bifunctional crystalline heterogeneous copper electrocatalyst by electrodeposition using a Robson-type macrocyclic dinuclear copper complex for efficient hydrogen and oxygen evolution from water. Dalton Trans 2017; 46:9131-9139. [DOI: 10.1039/c7dt01594a] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electro-deposited Cu(OH)2/Cu2O-based thin film on FTO with the macrocyclic dicopper complex shows excellent water splitting activity in excellent Faradaic efficiency.
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Affiliation(s)
- Samit Majumder
- Center for Chemical Energy Conversion Research and Institute of Science and Technology Research
- Chubu University
- Kasugai 487-8501
- Japan
| | - Ashraf Abdel Haleem
- Center for Chemical Energy Conversion Research and Institute of Science and Technology Research
- Chubu University
- Kasugai 487-8501
- Japan
- Department of Engineering Mathematics and Physics
| | - Perumandla Nagaraju
- Center for Chemical Energy Conversion Research and Institute of Science and Technology Research
- Chubu University
- Kasugai 487-8501
- Japan
| | - Yoshinori Naruta
- Center for Chemical Energy Conversion Research and Institute of Science and Technology Research
- Chubu University
- Kasugai 487-8501
- Japan
- JST
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24
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González-González J, Nájera-Lara M, López-Ramírez V, Ramírez-Vázquez JA, Segoviano-Garfias JJ. Spectrophotometric determination of the formation constants of calcium(II) complexes with 2,2'-bipyridyl and 1,10-phenanthroline in acetonitrile. RESOURCE-EFFICIENT TECHNOLOGIES 2016. [DOI: 10.1016/j.reffit.2016.11.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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25
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Abstract
Water oxidation is a key chemical transformation for the conversion of solar energy into chemical fuels. Our review focuses on recent work on robust earth-abundant heterogeneous catalysts for the oxygen-evolving reaction (OER). We point out that improvements in the performance of OER catalysts will depend critically on the success of work aimed at understanding reaction barriers based on atomic-level mechanisms. We highlight the challenge of obtaining acid-stable OER catalysts, with proposals for elements that could be employed to reach this goal. We suggest that future advances in solar fuels science will be accelerated by the development of new methods for materials synthesis and characterization, along with in-depth investigations of redox mechanisms at catalytic surfaces.
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Affiliation(s)
- Bryan M Hunter
- Beckman Institute and Division of Chemistry and Chemical Engineering, California Institute of Technology , M/C 139-74, Pasadena, California 91125, United States
| | - Harry B Gray
- Beckman Institute and Division of Chemistry and Chemical Engineering, California Institute of Technology , M/C 139-74, Pasadena, California 91125, United States
| | - Astrid M Müller
- Beckman Institute and Division of Chemistry and Chemical Engineering, California Institute of Technology , M/C 139-74, Pasadena, California 91125, United States
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26
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Liu X, Inagaki S, Gong J. Heterogene molekulare Systeme für eine photokatalytische CO2-Reduktion mit Wasseroxidation. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201600395] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Xiao Liu
- Key Laboratory for Green Chemical Technology of Ministry of Education, School of Chemical Engineering and Technology; Tianjin University; Collaborative Innovation Center of Chemical Science and Engineering; Tianjin 300072 China
| | - Shinji Inagaki
- Toyota Central R&D Laboratories, Inc.; Nagakute Aichi 480-1192 Japan
| | - Jinlong Gong
- Key Laboratory for Green Chemical Technology of Ministry of Education, School of Chemical Engineering and Technology; Tianjin University; Collaborative Innovation Center of Chemical Science and Engineering; Tianjin 300072 China
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27
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Liu X, Inagaki S, Gong J. Heterogeneous Molecular Systems for Photocatalytic CO2Reduction with Water Oxidation. Angew Chem Int Ed Engl 2016; 55:14924-14950. [DOI: 10.1002/anie.201600395] [Citation(s) in RCA: 248] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2016] [Indexed: 12/20/2022]
Affiliation(s)
- Xiao Liu
- Key Laboratory for Green Chemical Technology of Ministry of Education, School of Chemical Engineering and Technology; Tianjin University; Collaborative Innovation Center of Chemical Science and Engineering; Tianjin 300072 China
| | - Shinji Inagaki
- Toyota Central R&D Laboratories, Inc.; Nagakute Aichi 480-1192 Japan
| | - Jinlong Gong
- Key Laboratory for Green Chemical Technology of Ministry of Education, School of Chemical Engineering and Technology; Tianjin University; Collaborative Innovation Center of Chemical Science and Engineering; Tianjin 300072 China
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28
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Garain S, Barman K, Sinha TK, Jasimuddin S, Haeberle J, Henkel K, Schmeisser D, Mandal D. Cerium(III) Complex Modified Gold Electrode: An Efficient Electrocatalyst for the Oxygen Evolution Reaction. ACS APPLIED MATERIALS & INTERFACES 2016; 8:21294-21301. [PMID: 27490440 DOI: 10.1021/acsami.6b05236] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Exploring efficient and inexpensive electrocatalysts for the oxidation of water is of great importance for various electrochemical energy storage and conversion technologies. In the present study, a new water-soluble [Ce(III)(DMF) (HSO4)3] complex was synthesized and characterized by UV-vis, photoluminescence, and high-resolution X-ray photoelectron spectroscopy techniques. Owing to classic 5d → 4f transitions, an intense photoluminescence in the UV region was observed from the water-soluble [Ce(III)(DMF) (HSO4)3] complex. A stacking electrode was designed where self-assembled l-cysteine monolayer modified gold was immobilized with the synthesized cerium complex and was characterized by scanning electron microscopy, electrochemical impedance spectroscopy, and cyclic voltammetry. The resulting electrode, i.e., [Ce(III)(DMF) (HSO4)3]-l-cysteine-Au stacks shows high electrocatalytic water oxidation behavior at an overpotential of η ≈ 0.34 V under neutral pH conditions. We also demonstrated a way where the overpotential is possible to decrease upon irradiation of UV light.
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Affiliation(s)
- Samiran Garain
- Organic Nano-Piezoelectric Device Laboratory, Department of Physics Jadavpur University Kolkata700032, India
| | - Koushik Barman
- Department of Chemistry, Assam University , Silchar 788011, India
| | - Tridib Kumar Sinha
- Materials Science Centre, Indian Institute of Technology (IIT) , Kharagpur 721302, India
| | - Sk Jasimuddin
- Department of Chemistry, Assam University , Silchar 788011, India
| | - Jörg Haeberle
- Brandenburgische Technische Universität Cottbus-Senftenberg , Angewandte Physik-Sensorik, K.-Wachsmann-Allee 17, 03046 Cottbus, Germany
| | - Karsten Henkel
- Brandenburgische Technische Universität Cottbus-Senftenberg , Angewandte Physik-Sensorik, K.-Wachsmann-Allee 17, 03046 Cottbus, Germany
| | - Dieter Schmeisser
- Brandenburgische Technische Universität Cottbus-Senftenberg , Angewandte Physik-Sensorik, K.-Wachsmann-Allee 17, 03046 Cottbus, Germany
| | - Dipankar Mandal
- Organic Nano-Piezoelectric Device Laboratory, Department of Physics Jadavpur University Kolkata700032, India
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29
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Henthorn JT, Agapie T. Modulation of Proton-Coupled Electron Transfer through Molybdenum-Quinonoid Interactions. Inorg Chem 2016; 55:5337-42. [PMID: 27227812 DOI: 10.1021/acs.inorgchem.6b00331] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
An expanded series of π-bound molybdenum-quinonoid complexes supported by pendant phosphines has been synthesized. These compounds formally span three protonation-oxidation states of the quinonoid fragment (catechol, semiquinone, quinone) and two different oxidation states of the metal (Mo(0), Mo(II)), notably demonstrating a total of two protons and four electrons accessible in the system. Previously, the reduced Mo(0)-catechol complex 1 and its reaction with dioxygen to yield the two-proton/two-electron oxidized Mo(0)-quinone compound 4 was explored, while, herein, the expansion of the series to include the two-electron oxidized Mo(II)-catechol complex 2, the one-proton/two-electron oxidized Mo-semiquinone complex 3, and the two-proton/four-electron oxidized Mo(II)-quinone complexes 5 and 6 is reported. Transfer of multiple equivalents of protons and electrons from the Mo(0) and Mo(II) catechol complexes, 1 and 2, to H atom acceptor TEMPO suggests the presence of weak O-H bonds. Although thermochemical analyses are hindered by the irreversibility of the electrochemistry of the present compounds, the reactivity observed suggests weaker O-H bonds compared to the free catechol, indicating that proton-coupled electron transfer can be facilitated significantly by the π-bound metal center.
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Affiliation(s)
- Justin T Henthorn
- Division of Chemistry and Chemical Engineering, California Institute of Technology , 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
| | - Theodor Agapie
- Division of Chemistry and Chemical Engineering, California Institute of Technology , 1200 East California Boulevard, MC 127-72, Pasadena, California 91125, United States
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30
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González A, Sevilla E, Bes MT, Peleato ML, Fillat MF. Pivotal Role of Iron in the Regulation of Cyanobacterial Electron Transport. Adv Microb Physiol 2016; 68:169-217. [PMID: 27134024 DOI: 10.1016/bs.ampbs.2016.02.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Iron-containing metalloproteins are the main cornerstones for efficient electron transport in biological systems. The abundance and diversity of iron-dependent proteins in cyanobacteria makes those organisms highly dependent of this micronutrient. To cope with iron imbalance, cyanobacteria have developed a survey of adaptation strategies that are strongly related to the regulation of photosynthesis, nitrogen metabolism and other central electron transfer pathways. Furthermore, either in its ferrous form or as a component of the haem group, iron plays a crucial role as regulatory signalling molecule that directly or indirectly modulates the composition and efficiency of cyanobacterial redox reactions. We present here the major mechanism used by cyanobacteria to couple iron homeostasis to the regulation of electron transport, making special emphasis in processes specific in those organisms.
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Affiliation(s)
| | - E Sevilla
- University of Zaragoza, Zaragoza, Spain
| | - M T Bes
- University of Zaragoza, Zaragoza, Spain
| | | | - M F Fillat
- University of Zaragoza, Zaragoza, Spain.
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31
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Najafpour MM, Renger G, Hołyńska M, Moghaddam AN, Aro EM, Carpentier R, Nishihara H, Eaton-Rye JJ, Shen JR, Allakhverdiev SI. Manganese Compounds as Water-Oxidizing Catalysts: From the Natural Water-Oxidizing Complex to Nanosized Manganese Oxide Structures. Chem Rev 2016; 116:2886-936. [PMID: 26812090 DOI: 10.1021/acs.chemrev.5b00340] [Citation(s) in RCA: 337] [Impact Index Per Article: 42.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
All cyanobacteria, algae, and plants use a similar water-oxidizing catalyst for water oxidation. This catalyst is housed in Photosystem II, a membrane-protein complex that functions as a light-driven water oxidase in oxygenic photosynthesis. Water oxidation is also an important reaction in artificial photosynthesis because it has the potential to provide cheap electrons from water for hydrogen production or for the reduction of carbon dioxide on an industrial scale. The water-oxidizing complex of Photosystem II is a Mn-Ca cluster that oxidizes water with a low overpotential and high turnover frequency number of up to 25-90 molecules of O2 released per second. In this Review, we discuss the atomic structure of the Mn-Ca cluster of the Photosystem II water-oxidizing complex from the viewpoint that the underlying mechanism can be informative when designing artificial water-oxidizing catalysts. This is followed by consideration of functional Mn-based model complexes for water oxidation and the issue of Mn complexes decomposing to Mn oxide. We then provide a detailed assessment of the chemistry of Mn oxides by considering how their bulk and nanoscale properties contribute to their effectiveness as water-oxidizing catalysts.
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Affiliation(s)
| | - Gernot Renger
- Institute of Chemistry, Max-Volmer-Laboratory of Biophysical Chemistry, Technical University Berlin , Straße des 17. Juni 135, D-10623 Berlin, Germany
| | - Małgorzata Hołyńska
- Fachbereich Chemie und Wissenschaftliches Zentrum für Materialwissenschaften (WZMW), Philipps-Universität Marburg , Hans-Meerwein-Straße, D-35032 Marburg, Germany
| | | | - Eva-Mari Aro
- Department of Biochemistry and Food Chemistry, University of Turku , 20014 Turku, Finland
| | - Robert Carpentier
- Groupe de Recherche en Biologie Végétale (GRBV), Université du Québec à Trois-Rivières , C.P. 500, Trois-Rivières, Québec G9A 5H7, Canada
| | - Hiroshi Nishihara
- Department of Chemistry, School of Science, The University of Tokyo , 7-3-1, Hongo, Bunkyo-Ku, Tokyo 113-0033, Japan
| | - Julian J Eaton-Rye
- Department of Biochemistry, University of Otago , P.O. Box 56, Dunedin 9054, New Zealand
| | - Jian-Ren Shen
- Photosynthesis Research Center, Graduate School of Natural Science and Technology, Faculty of Science, Okayama University , Okayama 700-8530, Japan.,Photosynthesis Research Center, Key Laboratory of Photobiology, Institute of Botany, Chinese Academy of Sciences , Beijing 100093, China
| | - Suleyman I Allakhverdiev
- Controlled Photobiosynthesis Laboratory, Institute of Plant Physiology, Russian Academy of Sciences , Botanicheskaya Street 35, Moscow 127276, Russia.,Institute of Basic Biological Problems, Russian Academy of Sciences , Pushchino, Moscow Region 142290, Russia.,Department of Plant Physiology, Faculty of Biology, M.V. Lomonosov Moscow State University , Leninskie Gory 1-12, Moscow 119991, Russia
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32
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Liu X, Sun Z, Cui S, Du P. Cuprous oxide thin film directly electrodeposited from a simple copper salt on conductive electrode for efficient oxygen evolution reaction. Electrochim Acta 2016. [DOI: 10.1016/j.electacta.2015.11.059] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Distinct activity of the oxyl FeIIIO group in the methane dissociation by activated iron hydroxide: DFT predictions. Chem Phys Lett 2015. [DOI: 10.1016/j.cplett.2015.10.016] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Complex formation equilibria of 2,2′-bipyridyl and 1,10-phenanthroline with manganese(II) in methanol. KARBALA INTERNATIONAL JOURNAL OF MODERN SCIENCE 2015. [DOI: 10.1016/j.kijoms.2015.11.005] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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Tikhonov AN. Induction events and short-term regulation of electron transport in chloroplasts: an overview. PHOTOSYNTHESIS RESEARCH 2015; 125:65-94. [PMID: 25680580 DOI: 10.1007/s11120-015-0094-0] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2014] [Accepted: 01/26/2015] [Indexed: 05/03/2023]
Abstract
Regulation of photosynthetic electron transport at different levels of structural and functional organization of photosynthetic apparatus provides efficient performance of oxygenic photosynthesis in plants. This review begins with a brief overview of the chloroplast electron transport chain. Then two noninvasive biophysical methods (measurements of slow induction of chlorophyll a fluorescence and EPR signals of oxidized P700 centers) are exemplified to illustrate the possibility of monitoring induction events in chloroplasts in vivo and in situ. Induction events in chloroplasts are considered and briefly discussed in the context of short-term mechanisms of the following regulatory processes: (i) pH-dependent control of the intersystem electron transport; (ii) the light-induced activation of the Calvin-Benson cycle; (iii) optimization of electron transport due to fitting alternative pathways of electron flow and partitioning light energy between photosystems I and II; and (iv) the light-induced remodeling of photosynthetic apparatus and thylakoid membranes.
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Wang Y, Ahlquist MSG. A computational study of the mechanism for water oxidation by (bpc)(bpy)Ru(II)OH2. Dalton Trans 2015; 43:13776-82. [PMID: 25103115 DOI: 10.1039/c4dt02113d] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A mechanistic study on the catalytic cycle water oxidation with 1 [(bpc)(bpy)RuIIOH2]+ (Hbpc = 2,2′-bipyridine-6-carboxylic acid, bpy = 2,2′-bipyridine) is described in this paper. Stepwise oxidation via proton-coupled electron transfer gives 3 [(bpc)(bpy)RuIVO]+. An active 4 [(bpc)(bpy)RuVO]2+, which is involved in the OO bond formation is generated from further 1e− oxidation of 3. Another different possible reaction at 4 was investigated and new destructive paths involving overoxidation of the metal were identified. The most viable path for OO bond formation via a water nucleophilic attack at the oxo of 4 is found to be the rate-determining step in this water oxidation catalytic cycle, and the hydro-peroxo 6 [(bpc)(bpy)RuIIIOOH]+ is generated accompanied with a proton transfer. The super-oxo 7side-on [(bpc)(bpy)RuIVOO]+ and 8side-on [(bpc)(bpy)RuVOO]2+, both low spin species, are generated by further oxidations of 6. Through an intersystem crossing they can transform to their high spin states, 9end-on [(bpc)(bpy)RuIVOO]+ and 12end-on [(bpc)(bpy)RuVOO]2+, respectively. Following a dissociative pathway O2 is readily generated from both 9end-on and 12end-on.
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Affiliation(s)
- Ying Wang
- Division of Theoretical Chemistry & Biology, School of Biotechnology, KTH Royal Institute of Technology, 106 91 Stockholm, Sweden.
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Wang Y, Ahlquist MSG. Where does the water go? A computational study on the reactivity of a ruthenium(V) oxo complex (bpc)(bpy)Ru(V)O. Phys Chem Chem Phys 2015; 16:11182-5. [PMID: 24817209 DOI: 10.1039/c4cp01183j] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Two possible reactive sites (the oxo site and the Ru site) for water on a high-valent ruthenium(V) oxo complex were examined. Our results suggest that the reaction on the ruthenium (via a seven coordinate intermediate) has both a lower barrier and a product with a lower free energy than the product of addition at the oxo.
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Affiliation(s)
- Ying Wang
- Division of Theoretical Chemistry & Biology, School of Biotechnology, KTH Royal Institute of Technology, 106 91 Stockholm, Sweden.
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Xia M, Gao Y. Synthesis of tyrosine-involved corrole Cu(III), Mn(IV), and Mn(III) complexes as biomimetic models of oxygen evolving complex in photosystem II. RUSSIAN JOURNAL OF PHYSICAL CHEMISTRY A 2014. [DOI: 10.1134/s0036024414130263] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Kojima T, Kobayashi R, Ishizuka T, Yamakawa S, Kotani H, Nakanishi T, Ohkubo K, Shiota Y, Yoshizawa K, Fukuzumi S. Binding of Scandium Ions to Metalloporphyrin-Flavin Complexes for Long-Lived Charge Separation. Chemistry 2014; 20:15518-32. [DOI: 10.1002/chem.201403960] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2014] [Indexed: 11/08/2022]
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Čechová D, Martišková A, Padělková Z, Gal’a L, Dlháň L, Valigura D, Valko M, Boča R, Moncol J. Manganese(II) one-dimensional coordination polymers with nitrobenzoato or nitrosalicylato bridges: Syntheses, crystal structures, and magnetic properties. Polyhedron 2014. [DOI: 10.1016/j.poly.2014.05.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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Tikhonov AN. The cytochrome b6f complex at the crossroad of photosynthetic electron transport pathways. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2014; 81:163-83. [PMID: 24485217 DOI: 10.1016/j.plaphy.2013.12.011] [Citation(s) in RCA: 109] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2013] [Accepted: 12/11/2013] [Indexed: 05/03/2023]
Abstract
Regulation of photosynthetic electron transport at the level of the cytochrome b6f complex provides efficient performance of the chloroplast electron transport chain (ETC). In this review, after brief overview of the structural organization of the chloroplast ETC, the consideration of the problem of electron transport control is focused on the plastoquinone (PQ) turnover and its interaction with the b6f complex. The data available show that the rates of plastoquinol (PQH2) formation in PSII and its diffusion to the b6f complex do not limit the overall rate of electron transfer between photosystem II (PSII) and photosystem I (PSI). Analysis of experimental and theoretical data demonstrates that the rate-limiting step in the intersystem chain of electron transport is determined by PQH2 oxidation at the Qo-site of the b6f complex, which is accompanied by the proton release into the thylakoid lumen. The acidification of the lumen causes deceleration of PQH2 oxidation, thus impeding the intersystem electron transport. Two other mechanisms of regulation of the intersystem electron transport have been considered: (i) "state transitions" associated with the light-induced redistribution of solar energy between PSI and PSII, and (ii) redistribution of electron fluxes between alternative pathways (noncyclic electron transport and cyclic electron flow around PSI).
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Najafpour MM, Ghobadi MZ, Haghighi B, Eaton-Rye JJ, Tomo T, Shen JR, Allakhverdiev SI. Nano-sized manganese-calcium cluster in photosystem II. BIOCHEMISTRY (MOSCOW) 2014; 79:324-36. [DOI: 10.1134/s0006297914040026] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Yu F, Cangelosi VM, Zastrow ML, Tegoni M, Plegaria JS, Tebo AG, Mocny CS, Ruckthong L, Qayyum H, Pecoraro VL. Protein design: toward functional metalloenzymes. Chem Rev 2014; 114:3495-578. [PMID: 24661096 PMCID: PMC4300145 DOI: 10.1021/cr400458x] [Citation(s) in RCA: 329] [Impact Index Per Article: 32.9] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Fangting Yu
- University of Michigan, Ann Arbor, Michigan 48109, United States
| | | | | | | | | | - Alison G. Tebo
- University of Michigan, Ann Arbor, Michigan 48109, United States
| | | | - Leela Ruckthong
- University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Hira Qayyum
- University of Michigan, Ann Arbor, Michigan 48109, United States
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Kaplan A, Korin E, Bettelheim A. Structures Self-Assembled from Anionic Graphene and Cationic Manganese Porphyrin: Characterization and Application in Artificial Photosynthesis. Eur J Inorg Chem 2014. [DOI: 10.1002/ejic.201400054] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Alterations in Structural Organization Affect the Functional Ability of Photosynthetic Apparatus. ACTA ACUST UNITED AC 2014. [DOI: 10.1201/b16675-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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Bloor LG, Molina PI, Symes MD, Cronin L. Low pH electrolytic water splitting using earth-abundant metastable catalysts that self-assemble in situ. J Am Chem Soc 2014; 136:3304-11. [PMID: 24499042 DOI: 10.1021/ja5003197] [Citation(s) in RCA: 131] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Typical catalysts for the electrolysis of water at low pH are based on precious metals (Pt for the cathode and IrO2 or RuO2 for the anode). However, these metals are rare and expensive, and hence lower cost and more abundant catalysts are needed if electrolytically produced hydrogen is to become more widely available. Herein, we show that electrode-film formation from aqueous solutions of first row transition metal ions at pH 1.6 can be induced under the action of an appropriate cell bias and that in the case of cobalt voltages across the cell in excess of 2 V lead to the formation of a pair of catalysts that show functional stability for oxygen evolution and proton reduction for over 24 h. We show that these films are metastable and that if the circuit is opened, they redissolve into the electrolyte bath with concomitant O2 and H2 evolution, such that the overall Faradaic efficiency for charge into the system versus amounts of gases obtained approaches unity for both O2 and H2. This work highlights the ability of first row transition metals to mediate heterogeneous electrolytic water splitting in acidic media by exploiting, rather than trying to avoid, the natural propensity of the catalysts to dissolve at the low pHs used. This in turn we hope will encourage others to examine the promise of metastable electrocatalysts based on abundant elements for a range of reactions for which they have traditionally been overlooked on account of their perceived instability under the prevailing conditions.
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Affiliation(s)
- Leanne G Bloor
- WestCHEM, School of Chemistry, University of Glasgow , University Avenue, Glasgow G12 8QQ, U.K
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Perera A, Morales JA. Structure and photochemistry of a bio-inspired model for photocatalytic H2O splitting: Improved calculations of the Sobolewski and Domcke's Chlorophyll-Imidazole-Benzoquinone model complex. Mol Phys 2014. [DOI: 10.1080/00268976.2014.882081] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Structural, electronic and acid/base properties of [Ru(tpy)(tpyOH)]2+ and [Ru(tpyOH)2]2+ (tpy=2,2′:6′,2″-terpyridine, tpyOH=4′-hydroxy-2,2′:6′,2″-terpyridine). Polyhedron 2014. [DOI: 10.1016/j.poly.2013.09.029] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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