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For: Veening JW, Smits WK, Kuipers OP. Bistability, epigenetics, and bet-hedging in bacteria. Annu Rev Microbiol 2008;62:193-210. [PMID: 18537474 DOI: 10.1146/annurev.micro.62.081307.163002] [Citation(s) in RCA: 690] [Impact Index Per Article: 43.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Number Cited by Other Article(s)
651
Johnston RJ, Desplan C. Stochastic mechanisms of cell fate specification that yield random or robust outcomes. Annu Rev Cell Dev Biol 2010;26:689-719. [PMID: 20590453 DOI: 10.1146/annurev-cellbio-100109-104113] [Citation(s) in RCA: 89] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
652
Heinemann M, Zenobi R. Single cell metabolomics. Curr Opin Biotechnol 2010;22:26-31. [PMID: 20934866 DOI: 10.1016/j.copbio.2010.09.008] [Citation(s) in RCA: 103] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2010] [Accepted: 09/14/2010] [Indexed: 11/18/2022]
653
Ray S, Peters CA. Adaptations in microbiological populations exposed to dinitrophenol and other chemical stressors. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2010;29:2161-2168. [PMID: 20872677 DOI: 10.1002/etc.280] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
654
Epigenetic switching: bacteria hedge bets about staying or moving. Curr Biol 2010;20:R480-2. [PMID: 20541494 DOI: 10.1016/j.cub.2010.04.020] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
655
Nielsen AT, Dolganov NA, Rasmussen T, Otto G, Miller MC, Felt SA, Torreilles S, Schoolnik GK. A bistable switch and anatomical site control Vibrio cholerae virulence gene expression in the intestine. PLoS Pathog 2010;6:e1001102. [PMID: 20862321 PMCID: PMC2940755 DOI: 10.1371/journal.ppat.1001102] [Citation(s) in RCA: 79] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2010] [Accepted: 08/13/2010] [Indexed: 01/09/2023]  Open
656
The pdh operon is expressed in a subpopulation of stationary-phase bacteria and is important for survival of sugar-starved Streptococcus mutans. J Bacteriol 2010;192:4395-402. [PMID: 20581205 DOI: 10.1128/jb.00574-10] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
657
Origin and analysis of microbial population heterogeneity in bioprocesses. Curr Opin Biotechnol 2010;21:100-13. [PMID: 20138500 DOI: 10.1016/j.copbio.2010.01.002] [Citation(s) in RCA: 92] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2009] [Revised: 01/14/2010] [Accepted: 01/14/2010] [Indexed: 10/19/2022]
658
A mathematical and computational approach for integrating the major sources of cell population heterogeneity. J Theor Biol 2010;266:41-61. [PMID: 20685607 DOI: 10.1016/j.jtbi.2010.06.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2009] [Revised: 04/08/2010] [Accepted: 06/01/2010] [Indexed: 11/20/2022]
659
Wade WF, O’Toole GA. Antibodies and immune effectors: shaping Gram-negative bacterial phenotypes. Trends Microbiol 2010;18:234-9. [DOI: 10.1016/j.tim.2010.03.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2009] [Revised: 02/22/2010] [Accepted: 03/04/2010] [Indexed: 11/24/2022]
660
The threshold level of the sensor histidine kinase KinA governs entry into sporulation in Bacillus subtilis. J Bacteriol 2010;192:3870-82. [PMID: 20511506 DOI: 10.1128/jb.00466-10] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
661
Zhang DL, Ross T, Bowman JP. Physiological aspects of Listeria monocytogenes during inactivation accelerated by mild temperatures and otherwise non-growth permissive acidic and hyperosmotic conditions. Int J Food Microbiol 2010;141:177-85. [PMID: 20553835 DOI: 10.1016/j.ijfoodmicro.2010.05.015] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2010] [Revised: 04/14/2010] [Accepted: 05/14/2010] [Indexed: 11/25/2022]
662
Stupak EE, Stupak IV. Phenotypic switching of Escherichia coli cells containing cyclic digenic systems with negative feedback upon changes in cultivation conditions. RUSS J GENET+ 2010. [DOI: 10.1134/s1022795410050042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
663
McMeekin T, Hill C, Wagner M, Dahl A, Ross T. Ecophysiology of food-borne pathogens: Essential knowledge to improve food safety. Int J Food Microbiol 2010;139 Suppl 1:S64-78. [DOI: 10.1016/j.ijfoodmicro.2010.01.041] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2009] [Revised: 01/26/2010] [Accepted: 01/27/2010] [Indexed: 10/19/2022]
664
Havelaar AH, Brul S, de Jong A, de Jonge R, Zwietering MH, ter Kuile BH. Future challenges to microbial food safety. Int J Food Microbiol 2010;139 Suppl 1:S79-94. [DOI: 10.1016/j.ijfoodmicro.2009.10.015] [Citation(s) in RCA: 164] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2009] [Revised: 10/09/2009] [Accepted: 10/14/2009] [Indexed: 11/29/2022]
665
Eswaramoorthy P, Dinh J, Duan D, Igoshin OA, Fujita M. Single-cell measurement of the levels and distributions of the phosphorelay components in a population of sporulating Bacillus subtilis cells. MICROBIOLOGY-SGM 2010;156:2294-2304. [PMID: 20413551 DOI: 10.1099/mic.0.038497-0] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
666
Ter Beek A, Brul S. To kill or not to kill Bacilli: opportunities for food biotechnology. Curr Opin Biotechnol 2010;21:168-74. [DOI: 10.1016/j.copbio.2010.03.014] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2010] [Revised: 03/16/2010] [Accepted: 03/18/2010] [Indexed: 01/06/2023]
667
Chai Y, Norman T, Kolter R, Losick R. An epigenetic switch governing daughter cell separation in Bacillus subtilis. Genes Dev 2010;24:754-65. [PMID: 20351052 DOI: 10.1101/gad.1915010] [Citation(s) in RCA: 140] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
668
Veening JW, Kuipers OP. Gene position within a long transcript as a determinant for stochastic switching in bacteria. Mol Microbiol 2010;76:269-72. [PMID: 20233302 DOI: 10.1111/j.1365-2958.2010.07113.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
669
Cozy LM, Kearns DB. Gene position in a long operon governs motility development in Bacillus subtilis. Mol Microbiol 2010;76:273-85. [PMID: 20233303 DOI: 10.1111/j.1365-2958.2010.07112.x] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
670
Heterochronic phosphorelay gene expression as a source of heterogeneity in Bacillus subtilis spore formation. J Bacteriol 2010;192:2053-67. [PMID: 20154131 DOI: 10.1128/jb.01484-09] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
671
Goulian M. Two-component signaling circuit structure and properties. Curr Opin Microbiol 2010;13:184-9. [PMID: 20149717 DOI: 10.1016/j.mib.2010.01.009] [Citation(s) in RCA: 98] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2009] [Revised: 01/15/2010] [Accepted: 01/15/2010] [Indexed: 12/18/2022]
672
Tracy BP, Gaida SM, Papoutsakis ET. Flow cytometry for bacteria: enabling metabolic engineering, synthetic biology and the elucidation of complex phenotypes. Curr Opin Biotechnol 2010;21:85-99. [DOI: 10.1016/j.copbio.2010.02.006] [Citation(s) in RCA: 125] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2009] [Revised: 01/29/2010] [Accepted: 02/02/2010] [Indexed: 02/01/2023]
673
Synthetic biology: tools to design, build, and optimize cellular processes. J Biomed Biotechnol 2010;2010:130781. [PMID: 20150964 PMCID: PMC2817555 DOI: 10.1155/2010/130781] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2009] [Accepted: 10/28/2009] [Indexed: 11/17/2022]  Open
674
Coulon A, Gandrillon O, Beslon G. On the spontaneous stochastic dynamics of a single gene: complexity of the molecular interplay at the promoter. BMC SYSTEMS BIOLOGY 2010;4:2. [PMID: 20064204 PMCID: PMC2832887 DOI: 10.1186/1752-0509-4-2] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2009] [Accepted: 01/08/2010] [Indexed: 02/07/2023]
675
Pechmann S, Vendruscolo M. Derivation of a solubility condition for proteins from an analysis of the competition between folding and aggregation. MOLECULAR BIOSYSTEMS 2010;6:2490-7. [DOI: 10.1039/c005160h] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
676
Lei J, He G, Liu H, Nie Q. A delay model for noise-induced bi-directional switching. NONLINEARITY 2009;22:2845-2859. [PMID: 20592956 PMCID: PMC2893745 DOI: 10.1088/0951-7715/22/12/003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
677
López D, Kolter R. Extracellular signals that define distinct and coexisting cell fates in Bacillus subtilis. FEMS Microbiol Rev 2009;34:134-49. [PMID: 20030732 DOI: 10.1111/j.1574-6976.2009.00199.x] [Citation(s) in RCA: 198] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]  Open
678
Bistable expression of CsgD in biofilm development of Salmonella enterica serovar typhimurium. J Bacteriol 2009;192:456-66. [PMID: 19897646 DOI: 10.1128/jb.01826-08] [Citation(s) in RCA: 103] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
679
Danchin A. Information of the chassis and information of the program in synthetic cells. SYSTEMS AND SYNTHETIC BIOLOGY 2009;3:125-34. [PMID: 19816808 PMCID: PMC2759428 DOI: 10.1007/s11693-009-9036-5] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/10/2009] [Revised: 07/08/2009] [Accepted: 07/27/2009] [Indexed: 02/01/2023]
680
Petersen JM, Dubilier N. Methanotrophic symbioses in marine invertebrates. ENVIRONMENTAL MICROBIOLOGY REPORTS 2009;1:319-335. [PMID: 23765884 DOI: 10.1111/j.1758-2229.2009.00081.x] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
681
López D, Vlamakis H, Losick R, Kolter R. Cannibalism enhances biofilm development in Bacillus subtilis. Mol Microbiol 2009;74:609-18. [PMID: 19775247 DOI: 10.1111/j.1365-2958.2009.06882.x] [Citation(s) in RCA: 138] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
682
Modeling of the genetic switch of bacteriophage TP901-1: A heteromer of CI and MOR ensures robust bistability. J Mol Biol 2009;394:15-28. [PMID: 19747486 DOI: 10.1016/j.jmb.2009.08.075] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2009] [Revised: 08/23/2009] [Accepted: 08/27/2009] [Indexed: 11/22/2022]
683
Wilhelm T. The smallest chemical reaction system with bistability. BMC SYSTEMS BIOLOGY 2009;3:90. [PMID: 19737387 PMCID: PMC2749052 DOI: 10.1186/1752-0509-3-90] [Citation(s) in RCA: 116] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/13/2009] [Accepted: 09/08/2009] [Indexed: 11/10/2022]
684
Zamboni N, Sauer U. Novel biological insights through metabolomics and 13C-flux analysis. Curr Opin Microbiol 2009;12:553-8. [PMID: 19744879 DOI: 10.1016/j.mib.2009.08.003] [Citation(s) in RCA: 105] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2009] [Revised: 07/31/2009] [Accepted: 08/06/2009] [Indexed: 11/28/2022]
685
Thomas VC, Hancock LE. Suicide and fratricide in bacterial biofilms. Int J Artif Organs 2009;32:537-44. [PMID: 19851979 DOI: 10.1177/039139880903200902] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
686
López D, Vlamakis H, Losick R, Kolter R. Paracrine signaling in a bacterium. Genes Dev 2009;23:1631-8. [PMID: 19605685 DOI: 10.1101/gad.1813709] [Citation(s) in RCA: 150] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
687
Danchin A. Cells need safety valves. Bioessays 2009;31:769-73. [DOI: 10.1002/bies.200900024] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
688
Osera C, Amati G, Calvio C, Galizzi A. SwrAA activates poly-γ-glutamate synthesis in addition to swarming in Bacillus subtilis. Microbiology (Reading) 2009;155:2282-2287. [DOI: 10.1099/mic.0.026435-0] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
689
Rosenberg SM. Life, death, differentiation, and the multicellularity of bacteria. PLoS Genet 2009;5:e1000418. [PMID: 19282973 PMCID: PMC2648041 DOI: 10.1371/journal.pgen.1000418] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
690
Murray EJ, Kiley TB, Stanley-Wall NR. A pivotal role for the response regulator DegU in controlling multicellular behaviour. MICROBIOLOGY-SGM 2009;155:1-8. [PMID: 19118340 DOI: 10.1099/mic.0.023903-0] [Citation(s) in RCA: 92] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
691
Fraser D, Kaern M. A chance at survival: gene expression noise and phenotypic diversification strategies. Mol Microbiol 2009;71:1333-40. [DOI: 10.1111/j.1365-2958.2009.06605.x] [Citation(s) in RCA: 138] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
692
de Jong W, Manteca A, Sanchez J, Bucca G, Smith CP, Dijkhuizen L, Claessen D, Wösten HAB. NepA is a structural cell wall protein involved in maintenance of spore dormancy inStreptomyces coelicolor. Mol Microbiol 2009;71:1591-603. [DOI: 10.1111/j.1365-2958.2009.06633.x] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
693
Gardner A, Kümmerli R. Social evolution: this microbe will self-destruct. Curr Biol 2009;18:R1021-3. [PMID: 19000802 DOI: 10.1016/j.cub.2008.09.003] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
694
The capabilities of chaos and complexity. Int J Mol Sci 2009;10:247-291. [PMID: 19333445 PMCID: PMC2662469 DOI: 10.3390/ijms10010247] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2008] [Revised: 12/27/2008] [Accepted: 01/04/2009] [Indexed: 11/17/2022]  Open
695
Leisner M, Stingl K, Frey E, Maier B. Stochastic switching to competence. Curr Opin Microbiol 2008;11:553-9. [PMID: 18955155 DOI: 10.1016/j.mib.2008.09.020] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2008] [Revised: 09/24/2008] [Accepted: 09/28/2008] [Indexed: 11/15/2022]
696
DegU and Spo0A jointly control transcription of two loci required for complex colony development by Bacillus subtilis. J Bacteriol 2008;191:100-8. [PMID: 18978066 DOI: 10.1128/jb.01236-08] [Citation(s) in RCA: 77] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
697
Pedersen M, Hammer K. The role of MOR and the CI operator sites on the genetic switch of the temperate bacteriophage TP901-1. J Mol Biol 2008;384:577-89. [PMID: 18930065 DOI: 10.1016/j.jmb.2008.09.071] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2008] [Revised: 09/22/2008] [Accepted: 09/23/2008] [Indexed: 10/21/2022]
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