Vinyl-Pyridinium Triphenylamines: Novel Far-Red Emitters with High Photostability and Two-Photon Absorption Properties for Staining DNA

Vinyl-triphenylamine dyes, a new family of switchable fluorescent probes for targeted two-photon cellular imaging: from DNA to protein labeling

On the basis of our previous work on vinyl-triphenylamine derived DNA fluorophores we explored the structure space around this core by coupling it to diverse cationic, anionic and zwitterionic groups in the aim of targeting different classes of biomolecules. In parallel core modifications were performed to optimize the photophysical properties (quantum yield, two-photon absorption). The resulting water soluble π-conjugated molecules are called TP dyes and display an exceptional combination of optical properties: high two-photon absorption cross-section, high photostability, no self-quenching, and switchable fluorescence emission when bound to a biopolymer matrix. The linear and nonlinear optical properties of the TP dyes were studied in vitro in presence of DNA and in presence of a model protein (human serum albumin) using complementary absorption and fluorescence spectroscopy characterization tools. Structure modifications enabled to switch from DNA probes (cationic TP-pyridinium series) to protein probes (anionic TP-rhodanine series) without affecting the optical properties. Finally most TP compounds appear cell-permeant and show an intracellular localization consistent with their in vitro target specificity.

Theoretical investigation of the two-photon absorption properties of 3,6-bis(4-vinylpyridinium) carbazole derivatives--new biological fluorescent probes

The present study focuses on a series of carbazole derivatives, which are being investigated as potential two-photon fluorescent probes (TFP) for DNA detection and two-photon bioimaging. The geometric structures, electronic structures, and the one-photon (OPA) and two-photon (TPA) absorption properties of 3,6-bis(1-methyl-4-vinylpyridinium) carbazole (BMVC) derivatives, as well as their dications and diiodized derivatives, were studied using density functional theory (DFT) and Zerner's intermediate neglect of differential overlap (ZINDO) method. The results showed that the TPA spectra of the diiodized BMVC derivatives and their dications are all found in the near-infrared region (NIR). At the same time, the diiodized BMVC derivatives presented larger TPA cross-sections than the neutral BMVC derivatives and the dications. These theoretically derived values were also in good agreement with their corresponding experimentally observed values, and they indicated that the diiodized BMVC may be the form of this TFP that combines with DNA. The diiodized BMVC derivatives and the dications have the potential to be excellent TPA materials, especially when used as TFPs in nucleic acid imaging applications.

N-phenyl-carbazole-based two-photon fluorescent probes: strong sequence dependence of the duplex vs quadruplex selectivity

Herein we report on the synthesis and DNA recognition properties of a series of three N-phenyl carbazole-based light-up probes initially designed for two-photon absorption. The vinylic derivatives (Cbz-2Py, Cbz-3Py) display strong fluorescence enhancement when bound to various duplex- and quadruplex-forming oligonucleotides whereas the oxazole derivative is not fluorescent in DNA. Determination of affinity constants by fluorimetric titrations evidenced that Cbz-2Py has a clear preference for AT-rich duplex structures. Circular Dichroism (CD) measurements confirmed the sequence-dependent binding of this compound and suggest insertion in the minor groove as shown by a strong induced CD (ICD) signal and further supported by molecular modeling. Altogether the data indicate that duplex vs quadruplex selectivity of the dyes is strongly dependent on the sequence of the duplex. Finally, the dyes exhibit high two-photon absorption cross-sections (up to 540GM in glycerol) and allow a fine and bright staining of nuclear DNA with low background fluorescence as shown by one and two-photon confocal microscopy imaging of fixed cells.

Photophysical properties and photostability of novel benzothiazole-based D-π-A-π-D systems

The photophysical properties and photochemical stability of two novel D-π-A-π-D systems based on a benzothiazole core and terminal N,N-dimethylaminophenyl and N,N-diphenylaminophenyl groups were investigated. The quantum yield of photoreactions (Φ) was determined for various oxygen concentrations in the solvent (CH2Cl2) and various irradiation wavelengths. Trans-cis photoisomerization is proposed as a photobleaching mechanism during irradiation at longer wavelength due to charge-transfer transitions. Solution deoxygenation led to an unusual decrease in the photostability of the compounds investigated, most likely because of cation radical formation. The population of higher excited states for short-wavelength irradiation opened another degradation pathway and the overall degradation percentage decreased in comparison with long-wavelength irradiation. We assume that photoisomerization of the second double bond and electron transfer to CH2Cl2 (and subsequent oxidation reactions) contribute to this slower degradation branch. Singlet oxygen contributes significantly, albeit to the smallest values of Φ, to the overall photodegradation for both types of irradiation.

One- and two-photon stimulated emission depletion of a sulfonyl-containing fluorene derivative

One- and two-photon stimulated emission transitions were investigated by the fluorescence quenching of a sulfonyl-containing fluorene compound, 2,7-bis(4-(phenylsulfonyl)styryl)-9,9-didecyl-9H-fluorene (1), in solution at room temperature using a picosecond pump-probe technique. The nature of stimulated transitions under various fluorescence excitation and quenching conditions was analyzed theoretically, and good agreement with experimental data was demonstrated. Two-photon stimulated transitions S1-->S0 were shown for 1 at lambdaq=1064 nm, representing the first report of two-photon stimulated emission depletion (STED) in a molecular system. The two-photon stimulated emission cross section, delta2PE(lambdaq), of fluorene 1 was estimated to be approximately 240-280 GM, suggesting that this compound may be a good candidate for use in two-photon STED microscopy.