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Miyakawa S, Murasawa KI, Kobayashi K, Sawaoka AB. Cytosine and Uracil Synthesis by Quenching with High-Temperature Plasma. J Am Chem Soc 1999. [DOI: 10.1021/ja990961h] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Shin Miyakawa
- Contribution from the Materials and Structures Laboratory, Tokyo Institute of Technology, 4259, Nagatsuta, Midori, Yokohama 226-8503, Japan
| | - Ken-ichi Murasawa
- Contribution from the Materials and Structures Laboratory, Tokyo Institute of Technology, 4259, Nagatsuta, Midori, Yokohama 226-8503, Japan
| | - Kensei Kobayashi
- Contribution from the Materials and Structures Laboratory, Tokyo Institute of Technology, 4259, Nagatsuta, Midori, Yokohama 226-8503, Japan
| | - Akira B. Sawaoka
- Contribution from the Materials and Structures Laboratory, Tokyo Institute of Technology, 4259, Nagatsuta, Midori, Yokohama 226-8503, Japan
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52
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Miyakawa S, Kobayashi K, Sawaoka AB. Amino acid synthesis from CO-N2 and CO-N2-H2 gas mixtures via complex organic compounds. ADVANCES IN SPACE RESEARCH : THE OFFICIAL JOURNAL OF THE COMMITTEE ON SPACE RESEARCH (COSPAR) 1999; 24:465-468. [PMID: 11543333 DOI: 10.1016/s0273-1177(99)00089-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Reaction among hydrogen cyanide (HCN), formaldehyde (H2CO) and ammonia (NH3) are generally considered an important reaction in amino acid synthesis by electric discharge. Precursors of glycine and aspartic acid were, however, synthesized by adding water to metastable complex compounds produced by quenching a CO-N2 high-temperature plasma. In order to investigate effects of water remaining in an experimental vacuum chamber, optical emission spectroscopic and mass spectrometric measurements were conducted with CO-N2 and CO-N2-H2 gas mixtures. Although residual hydrogen atoms were detected in the CO-N2 experiment, the amount of them was much less than that in the CO-N2-H2 experiment.
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Affiliation(s)
- S Miyakawa
- Materials and Structures Laboratory, Tokyo Institute of Technology, Nagatsuta, Midori, Japan
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53
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Abstract
In view of the importance of a prebiotic source of high energy phosphates, we have investigated a number of potentially prebiotic processes to produce condensed phosphates from orthophosphate and cyclic trimetaphosphate from tripolyphosphate. The reagents investigated include polymerizing nitriles, acid anhydrides, lactones, hexamethylene tetramine and carbon suboxide. A number of these processes give substantial yields of pyrophosphate from orthophosphate and trimetaphosphate from tripolyphosphate. Although these reactions may have been applicable in local areas, they are not sufficiently robust to have been of importance in the prebiotic open ocean.
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Affiliation(s)
- A D Keefe
- Department of Chemistry, University of California, San Diego, La Jolla 92093-0317, USA
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54
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Robertson MP, Miller SL. Prebiotic synthesis of 5-substituted uracils: a bridge between the RNA world and the DNA-protein world. Science 1995; 268:702-5. [PMID: 7732378 DOI: 10.1126/science.7732378] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Under prebiotic conditions, formaldehyde adds to uracil at the C-5 position to produce 5-hydroxymethyluracil with favorable rates and equilibria. Hydroxymethyluracil adds a variety of nucleophiles, such as ammonia, glycine, guanidine, hydrogen sulfide, hydrogen cyanide, imidazole, indole, and phenol, to give 5-substituted uracils with the side chains of most of the 20 amino acids in proteins. These reactions are sufficiently robust that, if uracil had been present on the primitive Earth, then these substituted uracils would also have been present. The ribozymes of the RNA world would have included many of the functional groups found in proteins today, and their catalytic activities may have been considerably greater than presently assumed.
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Affiliation(s)
- M P Robertson
- Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla 92093, USA
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55
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Shimoyama A, Ikeda H, Nomoto S, Harada K. Formation of Carboxylic Acids from Elemental Carbon and Water by Arc-Discharge Experiments. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 1994. [DOI: 10.1246/bcsj.67.257] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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56
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57
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Chyba C, Sagan C. Endogenous production, exogenous delivery and impact-shock synthesis of organic molecules: an inventory for the origins of life. Nature 1992; 355:125-32. [PMID: 11538392 DOI: 10.1038/355125a0] [Citation(s) in RCA: 503] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Sources of organic molecules on the early Earth divide into three categories: delivery by extraterrestrial objects; organic synthesis driven by impact shocks; and organic synthesis by other energy sources (such as ultraviolet light or electrical discharges). Estimates of these sources for plausible end-member oxidation states of the early terrestrial atmosphere suggest that the heavy bombardment before 3.5 Gyr ago either produced or delivered quantities of organics comparable to those produced by other energy sources. Which sources of prebiotic organics were quantitatively dominant depends strongly on the composition of the early terrestrial atmosphere. In the event of an early strongly reducing atmosphere, production by atmospheric shocks seems to have dominated that due to electrical discharges. Organic synthesis by ultraviolet light may, in turn, have dominated shock production, but only if a long-wavelength absorber such as H2S were supplied to the atmosphere at a rate sufficient for synthesis to have been limited by ultraviolet flux, rather than by reactant abundance. In the apparently more likely case of an early terrestrial atmosphere of intermediate oxidation state, atmospheric shocks were probably of little importance for direct organic production. For [H2]/[CO2] ratios of approximately 0.1, net organic production was some three orders of magnitude lower than for reducing atmospheres, with delivery of intact exogenous organics in interplanetary dust particles (IDPs) and ultraviolet production being the most important sources. At still lower [H2]/[CO2] ratios, IDPs may have been the dominant source of prebiotic organics on the early Earth. Endogenous, exogenous and impact-shock sources of organics could each have made a significant contribution to the origins of life.
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Affiliation(s)
- C Chyba
- Laboratory for Planetary Studies, Cornell University, Ithaca, New York 14853, USA
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58
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Hirose Y, Ohmuro K, Saigoh M, Nakayama T, Yamagata Y. Synthesis of biomolecules from N2, CO, and H2O by electric discharge. ORIGINS LIFE EVOL B 1990. [DOI: 10.1007/bf01808195] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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59
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Abstract
It has long been speculated that Earth accreted prebiotic organic molecules important for the origins of life from impacts of carbonaceous asteroids and comets during the period of heavy bombardment 4.5 x 10(9) to 3.8 x 10(9) years ago. A comprehensive treatment of comet-asteroid interaction with the atmosphere, surface impact, and resulting organic pyrolysis demonstrates that organics will not survive impacts at velocities greater than about 10 kilometers per second and that even comets and asteroids as small as 100 meters in radius cannot be aerobraked to below this velocity in 1-bar atmospheres. However, for plausible dense (10-bar carbon dioxide) early atmospheres, we find that 4.5 x 10(9) years ago Earth was accreting intact cometary organics at a rate of at least approximately 10(6) to 10(7) kilograms per year, a flux that thereafter declined with a half-life of approximately 10(8) years. These results may be put in context by comparison with terrestrial oceanic and total biomasses, approximately 3 x 10(12) kilograms and approximately 6 x 10(14) kilograms, respectively.
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Affiliation(s)
- C F Chyba
- Laboratory for Planetary Studies, Cornell University, Ithaca, NY 14853, USA
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60
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The photochemical origins of life and photoreaction of ferrous ion in the archaean oceans. ORIGINS LIFE EVOL B 1990. [DOI: 10.1007/bf01808111] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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61
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The γ-irradiation of aqueous solutions of urea. Implications for chemical evolution. ORIGINS LIFE EVOL B 1989. [DOI: 10.1007/bf01808145] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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62
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Stribling R, Miller SL. Energy yields for hydrogen cyanide and formaldehyde syntheses: the HCN and amino acid concentrations in the primitive ocean. ORIGINS LIFE EVOL B 1987; 17:261-73. [PMID: 2819806 DOI: 10.1007/bf02386466] [Citation(s) in RCA: 126] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Prebiotic electric discharge and ultraviolet light experiments are usually reported in terms of carbon yields and involve a large input of energy to maximize yields. Experiments using lower energy inputs are more realistic prebiotic models and give energy yields which can be used to estimate the relative importance of the different energy sources on the primitive earth. Simulated prebiotic atmospheres containing either CH4, CO or CO2 with N2, H2O and variable amounts of H2 were subjected to the spark from a high frequency Tesla coil. The energy yields for the synthesis of HCN and H2CO were estimated. CH4 mixtures give the highest yields of HCN while H2CO is most efficiently produced with the CO mixtures. These results are a model for atmospheric corona discharges, which are more abundant than lightning and different in character. Preliminary experiments using artificial lightning are also reported. The energy yields from these experiments combined with the corona discharge available on the earth, allows a yearly production rate to be estimated. These are compared with other experiments and model calculations. From these production rates of HCN (e.g. 100 nmoles cm-2 yr-1) and the experimental hydrolysis rates, the steady state concentration in the primitive ocean can be calculated (e.g., 4 X 10(-6) M at pH 8 and 0 degrees). A steady state amino acid concentration of 3 X 10(-4) M is estimated from the HCN production rate and the rate of decomposition of the amino acids by passage through the submarine vents.
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63
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Shen C, Yang L, Miller SL, Oró J. Prebiotic synthesis of imidazole-4-acetaldehyde and histidine. ORIGINS LIFE EVOL B 1987; 17:295-305. [PMID: 2957640 DOI: 10.1007/bf02386469] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
The prebiotic synthesis of imidazole-4-acetaldehyde and imidazole-4-glycol from erythrose and formamidine has been demonstrated as well as the prebiotic synthesis of imidazole-4-ethanol and imidazole-4-glycol from erythrose, formaldehyde and ammonia. The products were identified by TLC, HPLC, and LC-MS by comparison with authentic samples. The maximum yields of imidazole-4-acetaldehyde, imidazole-4-ethanol, and imidazole-4-glycol obtained in these reactions are 1.6, 5.4, 6.8% respectively, based on the erythrose. Imidazole-4-acetaldehyde would have been converted to histidine on the primitive earth by a Strecker synthesis, and several prebiotic reactions would convert imidazole-4-glycol and imidazole-4-ethanol to imidazole-4-acetaldehyde.
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Abstract
HCN has been detected in the Jovian atmosphere at a column density of about 2.2 x 10(-7) moles cm-2. While photochemical synthesis from methylamine and aziridine, upwelling, and lightning have been proposed as possible sources of this HCN, corona discharge has not been previously considered. HCN energy yields (moles J-1) were measured using corona discharge for gas mixtures containing H2, CH4, NH3, with H2/CH4 ratios from 4.4 to 1585. The yields are approximately proportional to the mole fraction of methane in the gas mixture. Assuming that the 3/1 ratio of corona discharge to lightning energy on the Earth applies to Jupiter, HCN column densities from corona discharge could account for approximately 10% of the observed HCN. These estimates are very dependent on the values used for the energy available as lightning on Jupiter and the eddy diffusion coefficients in the region of synthesis.
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Affiliation(s)
- R Stribling
- Department of Chemistry, University of California, San Diego, La Jolla 92093, USA
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65
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Stribling R, Miller SL. Energy yields for the production of hcn in atmospheres wtth high H2/CH4 ratios: Implications for the jovian atmosphere and the solar nebula. ORIGINS LIFE EVOL B 1986. [DOI: 10.1007/bf02421987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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66
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Yuasa S, Flory D, Basile B, Oró J. Abiotic synthesis of purines and other heterocyclic compounds by the action of electrical discharges. J Mol Evol 1984; 21:76-80. [PMID: 6442361 DOI: 10.1007/bf02100630] [Citation(s) in RCA: 29] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
The synthesis of purines and pyrimidines using Oparin-Urey-type primitive Earth atmospheres has been demonstrated by reacting methane, ethane, and ammonia in electrical discharges. Adenine, guanine, 4-aminoimidazole-5-carboxamide (AICA), and isocytosine have been identified by UV spectrometry and paper chromatography as the products of the reaction. The total yields of the identified heterocyclic compounds are 0.0023%. It is concluded that adenine synthesis occurs at a much lower concentration of hydrogen cyanide than has been shown by earlier studies. Pathways for the synthesis of purines from hydrogen cyanide are discussed, and a comparison of the heterocyclic compounds that have been identified in meteorites and in prebiotic reactions is presented.
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67
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Yuasa S, Flory D, Basile B, Oró J. On the abiotic formation of amino acids. I. HCN as a precursor of amino acids detected in extracts of lunar samples. II. Formation of HCN and amino acids from simulated mixtures of gases released from lunar samples. J Mol Evol 1984; 20:52-8. [PMID: 6330374 DOI: 10.1007/bf02101985] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Two studies on the abiotic formation of amino acids are presented. The first study demonstrates the role of hydrogen cyanide as a precursor of amino acids detected in extracts of lunar samples. The formation of several amino acids, including glycine, alanine, aspartic acid, and glutamic acid, under conditions similar to those used for the analysis of lunar samples is demonstrated. The second study investigates the formation of hydrogen cyanide as well as amino acids from lunar-sample gas mixtures under electrical discharge conditions. These results extend the possibility of synthesis of amino acids to planetary bodies with primordial atmospheres less reducing than a mixture of methane, ammonia, hydrogen and water.
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68
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Schlesinger G, Miller SL. Prebiotic synthesis in atmospheres containing CH4, CO, and CO2. II. Hydrogen cyanide, formaldehyde and ammonia. J Mol Evol 1983; 19:383-90. [PMID: 6315963 DOI: 10.1007/bf02101643] [Citation(s) in RCA: 89] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The electric discharge synthesis of HCN, H2CO, NH3 and urea has been investigated using various mixtures of CH4, CO, CO2, N2, NH3, H2O, and H2. HCN and H2CO were each synthesized in yields as high as 10% from CH4 as a carbon source. Similar yields were obtained from CO when H2/CO greater than 1.0 and from CO2 when H2/CO2 greater than 2.0. At H2/CO2 less than 1.0 the yields fall off drastically. Good yields of NH3 (0.7 to 5%) and fair yields of urea (0.02 to 0.63%) based on nitrogen were also obtained. The directly synthesized NH3 together with the NH3 obtained from the hydrolysis of HCN, nitriles and urea could have been a major source of ammonia in the atmosphere and oceans of the primitive earth. These results show that prebiotic syntheses from HCN and H2CO to give products such as purines and sugars and some amino acids could have occurred in primitive atmospheres containing CO and CO2 provided the H2/CO and H2/CO2 ratios were greater than about 1.0. Methane containing atmospheres give comparable quantities of HCN and H2CO, and are superior in the synthesis of amino acids.
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