Three sibling species within Contracaecum osculatum (Nematoda, Ascaridida, Ascaridoidea) from the Atlantic Arctic-Boreal region: reproductive isolation and host preferences

Mutation scanning for sequence variation in three mitochondrial DNA regions for members of theContracaecum osculatum (Nematoda: Ascaridoidea) complex

Anisakid nematodes of seals from different geographical origins, previously identified by multilocus enzyme electrophoresis as Contracaecum osculatum A (CoA), C. osculatum B (CoB), C. osculatum C (CoC), C. osculatum D (CoD), C. osculatum E (CoE) and C. osculatum baicalensis (Cob), were characterised genetically using a mutation scanning approach, in order to define genetic markers for their specific identification and differentiation. Three mitochondrial DNA (mtDNA) regions, namely cytochrome c oxidase subunit I (COI), and the small and large subunits of rRNA (ssrRNA and IsrRNA, respectively) were amplified separately from individual nematodes by polymerase chain reaction (PCR), analysed by single-strand conformation polymorphism (SSCP), and samples displaying sequence variability were subjected to sequencing. Forty-six haplotypes were defined for 62-66 individuals (representing the six members of C. osculatum). All taxa except CoD and CoE could be identified, or delineated from one another, by nucleotide differences in the COI, ssrRNA and/or IsrRNA sequences. For all three mtDNA regions, 4 (10.5%), 7 (18.4%), 15 (39.5%) and 11 (28.9%) of 38 nucleotide positions were considered diagnostic (fixed) and could thus unequivocally delineate CoA, CoB, CoC and Cob. The lack of an unequivocal nucleotide difference in any of the three mtDNA sequences between CoD and CoE was in accordance with previous ribosomal DNA sequence data but inconsistent with multilocus enzyme electrophoretic data. Using all fixed nucleotide positions, CoA, CoD/E and CoB were genetically more similar to Cob than each was to CoC, similar to previous findings. In spite of not being able to distinguish among all six taxa of C. osculatum, the present study demonstrated clearly the usefulness and attributes of the mutation scanning approach for investigating population genetic structures of species of parasitic nematodes.

Phylogeny of the Ascaridoidea (Nematoda: Ascaridida) based on three genes and morphology: hypotheses of structural and sequence evolution

Ascaridoid nematodes parasitize the gastrointestinal tract of vertebrate definitive hosts and are represented by more than 50 described genera. We used 582 nucleotides (83% of the coding sequence) of the mitochondrial gene cytochrome oxidase subunit 2, in combination with published small- and large-subunit nuclear rDNA sequences (2,557 characters) and morphological data (20 characters), to produce a phylogenetic hypothesis for representatives of this superfamily. This combined evidence phylogeny strongly supported clades that, with 1 exception, were consistent with Fagerholm's 1991 classification. Parsimony mapping of character states on the combined evidence tree was used to develop hypotheses for the evolution of morphological, life history, and amino acid characters. This analysis of character evolution revealed that certain key features that have been used by previous workers for developing taxonomic and evolutionary hypotheses represent plesiomorphic states. Cytochrome oxidase subunit 2 nucleotides show a strong compositional bias to A+T and a substitution bias to thymine. These biases are most apparent at third positions of codons and 4-fold degenerate sites, which is consistent with the nonrandom substitution pattern of A+T pressure. Despite nucleotide bias, cytochrome oxidase amino acid sequences show conservation and retention of critical functional residues, as inferred from comparisons to other organisms.

Pseudoterranova decipiens species A and B (Nematoda, Ascaridoidea): nomenclatural designation, morphological diagnostic characters and genetic markers

Five genetically distinct and reproductively isolated species have been detected previously within the morphospecies Pseudoterranova decipiens from the Arctic-Boreal, Boreal and Antarctic. Morphological analysis was carried out on male specimens identified by genetic (allozyme) markers, allowing the detection of significant differences at a number of characters between two members of the P. decipiens complex, namely P. decipiens A and B. On the basis of such differences, the nomenclatural designation for the two species is discussed. The names Pseudoterranova krabbei n. sp. and P. decipiens (sensu stricto) are proposed for species A and B, respectively. Morphological and genetic differentiation between the two species is shown using multivariate analysis. Allozyme diagnostic keys for routine identification of the four members of the P. decipiens complex, namely P. decipiens (s.s.), P. krabbei, P. bulbosa and P. azarasi, irrespective of sex and life-history stage, are provided.

Genetic markers in ribosomal DNA for the identification of members of the genus Anisakis (Nematoda: ascaridoidea) defined by polymerase-chain-reaction-based restriction fragment length polymorphism

Polymerase-chain-reaction-based restriction fragment length polymorphism analysis was performed to establish genetic markers in rDNA, for the identification of the three sibling species of the Anisakis simplex complex and morphologically differentiated Anisakis species, i.e. Anisakis physeteris, Anisakis schupakovi, Anisakis typica and Anisakis ziphidarum. Different restriction patterns were found between A. simplex sensu stricto and Anisakis pegreffii with two of the restriction endonucleases used (HinfI and TaqI), between A. simplex sensu stricto and A. simplex C with one endonuclease (HhaI), and between A. simplex C and Aniskis pegreffii with three endonucleases (HhaI, HinfI and TaqI), while no variation in patterns was detected among individuals within each species. The species A. physeteris, A. schupakovi, A. typica and A. ziphidarum were found to be different from each other and different from the three sibling species of the A. simplex complex by distinct fragments using 10-12 of the endonucleases tested. The polymorphisms obtained by restriction fragment length polymorphisms have provided a new set of genetic markers for the accurate identification of sibling species and morphospecies.

Life cycle variation and the genetic structure of nematode populations

Few data are available on population genetic structure in nematode species, and little of the available data allows direct comparison of the genetic structures of species having different life cycles. Here we use mtDNA sequence data to describe the genetic structure of a heterorhabditid nematode, and compare results to published data on other nematode species. Heterorhabditis marelatus is a parasite of soil-dwelling insects. Its life cycle and local ecology should result in small effective population sizes and restricted gene flow. As predicted, H. marelatus shows much lower mtDNA diversity within populations and over the species as a whole, and has a much more strongly subdivided population structure, than parasites of mobile vertebrate hosts. From data such as these we can begin to generalize about the effects of life cycle variation on genetic structure in different nematode species.

Multilocus enzyme electrophoresis: a valuable technique for providing answers to problems in parasite systematics

The aim of this review is to highlight the effectiveness of the technique of multilocus enzyme electrophoresis in answering questions relating to the systematics of parasites and to highlight errors in the way the technique has been used and the results interpreted. We have approached this topic by answering specific questions that we have been asked by colleagues and students not necessarily familiar with the technique, the method of data analysis and its application. Although the technique has been applied to provide answers for taxonomic and population genetics studies, it remains under-utilised, perhaps because of recent advances in newer molecular technology. Rather than not acknowledge or dismiss the value of more traditional technology, we suggest that researchers examine problems in the systematics of parasites by the comparison of data derived from morphological, biochemical and molecular techniques.

Characterisation of anisakid nematodes with zoonotic potential by nuclear ribosomal DNA sequences

Larvae of three species of anisakid nematode from fish, Anisakis simplex, Hysterothylacium aduncum and Contracaecum osculatum, were characterised genetically using a molecular approach. The nuclear ribosomal DNA region spanning the first internal transcribed spacer, the 5.8S gene and the second internal transcribed spacer was amplified and sequenced. The lengths of the first and second internal transcribed spacer sequences of the three species ranged from 392 to 449 bp and 262 to 347 bp, respectively, whereas the 5.8S sequence was 157 bp. For the three species, the G+C contents for the three regions of ribosomal DNA ranged from 42.4 to 52.2%. While no intraspecific variation was detected in the second internal transcribed spacer or 5.8S sequence of any species examined, one polymorphic nucleotide position was detected in the first internal transcribed spacer sequence for A. simplex and H. aduncum. The extent of sequence differences in the first (approximately 34-45%) and second (approximately 50-53%) internal transcribed spacers among the species was greater than in the 5.8S gene (approximately 3-5%). Based on the sequence differences, PCR-based restriction fragment length polymorphism and single-strand conformation polymorphism methods were established for the unequivocal delineation of the three species. These methods should provide valuable tools for studying the life-cycle, transmission pattern(s) and population structure of each of the three anisakid nematodes examined herein, and for the diagnosis of anisakiasis in humans and animals.

Ribosomal DNA and phylogeny of the Ascaridoidea (Nemata: Secernentea): implications for morphological evolution and classification

Nematodes of the superfamily Ascaridoidea are parasites of the alimentary tract of vertebrates and include species that are of medical and economic importance. Existing evolutionary hypotheses for these organisms have frequently been based on interpretation of one or few "key" structural or life history features. We used nuclear-encoded small (1764 characters) and large subunit (757 characters) ribosomal DNA sequences to estimate the phylogeny of representative taxa from this superfamily. Trees inferred by maximum parsimony and maximum likelihood methods strongly support clades that are primarily consistent with one recent classification of the group. In contrast, most previously proposed phylogenetic hypotheses were significantly worse when compared to the maximum likelihood tree by a statistical method. Hypotheses for the evolution of morphological and life history characters were explored by parsimony mapping these features on several tree topologies, including optimal molecular trees and alternative topologies reflecting traditional expectations deemed not worse in statistical tests. The results identify some consistent putative shared-derived morphological features, but also strongly suggest that some key features emphasized by previous workers represent ancestral states or highly homoplastic characters.

Genomic identification of Anisakis simplex isolates

RAPD technique was used to differentiate individuals of Anisakis simplex obtained from Merluccius merluccius, Phycis blennoides, Conger conger and Lepidorhombus boscii, from the North Atlantic Ocean. The amplification patterns of the host DNA controls were markedly different from those obtained for the parasitic material. No variation within the same host was detected. The amplification patterns for larvae obtained from fish of the same genus were somewhat different. The amplification patterns of A. simplex isolates from M. merluccius, P. blennoides, C. conger and L. boscii, were different. These results suggest the possible existence of two populations with a considerable high genetic variability and a different adaptation to different host species.

Micro-evolutionary implications of allozymic and morphometric variations in sealworms Pseudoterranova sp. (Ascaridoidea: Anisakidae) among sympatric hosts from the southeastern Pacific Ocean

We found significant morphometric and electrophoretic differences between sealworm larvae collected from four sympatric fish host species off the central coast of Chile. The South American sea lion, Otaria byronia, is a suitable host and most likely the only definitive host species in the study area. Morphological patterns of caudal papillae in adult males collected from sea lions and electrophoretic evidence from larvae and adults substantiate our conclusion that they belong to just one, new species yet to be described. The genetic and morphometric differences found between sealworm larvae from sympatric fish hosts may be due to selective pressures arising from the internal environment of the intermediate hosts, although they may serve only for passing sequential filters along the life cycle. The discussion deals with the roles that definitive and intermediate hosts may play in the micro-evolutionary processes of sealworms.

The life cycle of Contracaecum osculatum (Rudolphi, 1802) sensu stricto (Nematoda, Ascaridoidea, Anisakidae) in view of experimental infections

Hatched, ensheathed third-stage larvae of Contracaecum osculatum, 300-320 microns long, were shown to be infective to copepods, to nauplius larvae of Balanus and to small specimens of fishes (sticklebacks, O-group eelpout). Other fishes such as gobies and small flatfishes became infected by ingesting infected crustaceans. Cod were infected by being given infected small fishes. In the crustacean paratenic hosts, little growth of the larvae occurred, if any. In the liver sinusoids of sticklebacks and gobies the length of most of the unencapsulated third-stage larvae had not even doubled within 6 months of infection. The fate of larvae (max. 2 mm long) given to cod via infected intermediate fish hosts was apparently decided by the size of the larvae only. Small larvae became encapsulated and eventually died in the liver and wall of the gastrointestinal tract. Larger larvae migrated to the liver parenchyma, where some grew to a length of as much as 10 mm. The growth of the larvae in sticklebacks was shown not to be affected by an increase in temperature (infected fish being transferred from 8 degrees to 14 degrees and 20 degrees C), by the intensity of infection and, partly, by the age of infection (e.g. some 2-week-old and 6-month-old larvae were of identical size). In the liver and mesentery of plaice the third-stage larvae developed via copepod paratenic hosts to infectivity (i.e. to more than 4 mm in length), showing that the life cycle may be completed with an optional paratenic invertebrate host and only one intermediate fish host.(ABSTRACT TRUNCATED AT 250 WORDS)

Historical biogeography and modes of speciation across high-latitude seas of the Holarctic: concepts for host – parasite coevolution among the Phocini (Phocidae) and Tetrabothriidae (Eucestoda)

Species of Anophryocephalus are host-specific parasites of pinnipeds in the Holarctic. Phylogenetic analysis of 7 species postulates A. anophrys as the basal taxon and A. inuitorum as basal to A. skrjabini; A. arcticensis is basal to A. nunivakensis and A. eumetopii + A. ochotensis (single tree; consistency index = 74.4%; homoplasy slope ratio = 36.45%). Evaluation of host and geographic distributions postulates ringed seals of the Atlantic–Arctic as ancestral hosts, and the Arctic basin as a paraphyletic area with respect to the North Pacific. Cospeciation within this assemblage was dependent on intense isolation of small effective populations of definitive hosts during the late Tertiary and Pleistocene glacial stages. Rapid modes of parasite speciation, compatible with microallopatry and peripheral isolation, appear to have been associated with isolation of pinniped populations in refugial habitats of the Arctic basin and Beringia. The biogeography of host–parasite assemblages among pinnipeds and Alcidae (Charadriiformes) during the Pliocene and Quaternary contrasts in part with the history elucidated for some free-living invertebrate taxa in the Arctic basin.

Two new members in the Contracaecum osculatum complex (Nematoda, Ascaridoidea) from the Antarctic

The genetic structure of adults and larvae of Contracaecum osculatum (sensu lato) from the Antarctic is analyzed on the basis of 24 enzyme loci. Significant deviations of genotype frequencies from the Hardy-Weinberg equilibrium were found, even in samples recovered from the same host. These data indicate that two distinct, reproductively isolated species coexist in C. osculatum (sensu lato) samples from the Antarctic. They were provisionally designated C. osculatum D and E, as they do not correspond to any of the three species previously detected in this complex from the Atlantic Arctic Boreal region (C. osculatum A, B and C). An allozyme diagnostic key for the identification of the five members of the C. osculatum complex, at the larval and adult stage and in both sexes, is given. Species D and E were found to be genetically quite variable: average P99 = 84.3, A = 3.3 and He = 0.23. Both showed high values of intraspecific gene flow: Nm = 4.6 and 6.1 respectively; similar values were found for the Arctic-Boreal C. osculatum A, B and C. The most related members of the complex are the Antarctic species E and the Arctic-Boreal species A (DNei = 0.21), while the most differentiated ones are the Arctic-Boreal species B and C (DNei = 0.76). The evolutionary divergence of C. osculatum C started more than 3 million years ago, in a Pliocene refugium (Baltic Sea). As to the other C. osculatum species, their evolutionary divergence took place during Pleistocene, when this complex achieved a bipolar distribution. This process involved two distinct colonizations of the marine Antarctic region by ancestors of the northern hemisphere, about 1.5 and 1 million years ago, giving origin to C. osculatum D and E respectively.