51
|
Schmidt CS, Mrnka L, Frantík T, Lovecká P, Vosátka M. Plant growth promotion of Miscanthus × giganteus by endophytic bacteria and fungi on non-polluted and polluted soils. World J Microbiol Biotechnol 2018. [DOI: 10.1007/s11274-018-2426-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
52
|
|
53
|
Oladipo OG, Awotoye OO, Olayinka A, Bezuidenhout CC, Maboeta MS. Heavy metal tolerance traits of filamentous fungi isolated from gold and gemstone mining sites. Braz J Microbiol 2017; 49:29-37. [PMID: 28844883 PMCID: PMC5790576 DOI: 10.1016/j.bjm.2017.06.003] [Citation(s) in RCA: 70] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2016] [Revised: 04/19/2017] [Accepted: 06/05/2017] [Indexed: 01/27/2023] Open
Abstract
Increased environmental pollution has necessitated the need for eco-friendly clean-up strategies. Filamentous fungal species from gold and gemstone mine site soils were isolated, identified and assessed for their tolerance to varied heavy metal concentrations of cadmium (Cd), copper (Cu), lead (Pb), arsenic (As) and iron (Fe). The identities of the fungal strains were determined based on the internal transcribed spacer 1 and 2 (ITS 1 and ITS 2) regions. Mycelia growth of the fungal strains were subjected to a range of (0–100 Cd), (0–1000 Cu), (0–400 Pb), (0–500 As) and (0–800 Fe) concentrations (mgkg−1) incorporated into malt extract agar (MEA) in triplicates. Fungal radial growths were recorded every three days over a 13-days’ incubation period. Fungal strains were identified as Fomitopsis meliae, Trichoderma ghanense and Rhizopus microsporus. All test fungal exhibited tolerance to Cu, Pb, and Fe at all test concentrations (400–1000 mgkg−1), not differing significantly (p > 0.05) from the controls and with tolerance index >1. T. ghanense and R. microsporus demonstrated exceptional capacity for Cd and As concentrations, while showing no significant (p > 0.05) difference compared to the controls and with a tolerance index >1 at 25 mgkg−1 Cd and 125 mgkg−1 As. Remarkably, these fungal strains showed tolerance to metal concentrations exceeding globally permissible limits for contaminated soils. It is envisaged that this metal tolerance trait exhibited by these fungal strains may indicate their potentials as effective agents for bioremediative clean-up of heavy metal polluted environments.
Collapse
Affiliation(s)
| | | | - Akinyemi Olayinka
- Obafemi Awolowo University, Department of Soil and Land Resources Management, Ile-Ife, Nigeria
| | | | - Mark Steve Maboeta
- North-West University, Unit for Environmental Sciences and Management, Potchefstroom, South Africa
| |
Collapse
|
54
|
Wężowicz K, Rozpądek P, Turnau K. Interactions of arbuscular mycorrhizal and endophytic fungi improve seedling survival and growth in post-mining waste. MYCORRHIZA 2017; 27:499-511. [PMID: 28317065 PMCID: PMC5486607 DOI: 10.1007/s00572-017-0768-x] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Accepted: 03/10/2017] [Indexed: 05/08/2023]
Abstract
The impact of fungal endophytes and the modulating role of arbuscular mycorrhizal fungi (AMF) on the vitality of Verbascum lychnitis, grown in the laboratory in a substratum from a post-mining waste dump was investigated. We report that inoculation with a single endophyte negatively affected the survival rate and biomass production of most of the plant-endophyte consortia examined. The introduction of arbuscular mycorrhiza fungi into this setup (dual inoculation) had a beneficial effect on both biomass yield and survivability. V. lychnitis co-inoculated with AMF and Cochliobolus sativus, Diaporthe sp., and Phoma exigua var. exigua yielded the highest biomass, exceeding the growth rate of both non-inoculated and AMF plants. AMF significantly improved the photosynthesis rates of the plant-endophyte consortia, which were negatively affected by inoculation with single endophytes. The abundance of PsbC, a photosystem II core protein previously shown to be upregulated in plants colonized by Epichloe typhina, exhibited a significant increase when the negative effect of the fungal endophyte was attenuated by AMF.
Collapse
Affiliation(s)
- Katarzyna Wężowicz
- Institute of Environmental Sciences, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland
| | - Piotr Rozpądek
- Malopolska Centre of Biotechnology, Jagiellonian University, Gronostajowa 7A, 30-387, Kraków, Poland.
| | - Katarzyna Turnau
- Institute of Environmental Sciences, Jagiellonian University, Gronostajowa 7, 30-387, Kraków, Poland
| |
Collapse
|
55
|
Jin HQ, Liu HB, Xie YY, Zhang YG, Xu QQ, Mao LJ, Li XJ, Chen J, Lin FC, Zhang CL. Effect of the dark septate endophytic fungus Acrocalymma vagum on heavy metal content in tobacco leaves. Symbiosis 2017. [DOI: 10.1007/s13199-017-0485-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
|
56
|
Mohd S, Shukla J, Kushwaha AS, Mandrah K, Shankar J, Arjaria N, Saxena PN, Narayan R, Roy SK, Kumar M. Endophytic Fungi Piriformospora indica Mediated Protection of Host from Arsenic Toxicity. Front Microbiol 2017; 8:754. [PMID: 28539916 PMCID: PMC5423915 DOI: 10.3389/fmicb.2017.00754] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2017] [Accepted: 04/12/2017] [Indexed: 12/14/2022] Open
Abstract
Complex intercellular interaction is a common theme in plant-pathogen/symbiont relationship. Cellular physiology of both the partners is affected by abiotic stress. However, little is known about the degree of protection each offers to the other from different types of environmental stress. Our current study focused on the changes in response to toxic arsenic in the presence of an endophytic fungus Piriformospora indica that colonizes the paddy roots. The primary impact of arsenic was observed in the form of hyper-colonization of fungus in the host root and resulted in the recovery of its overall biomass, root damage, and chlorophyll due to arsenic toxicity. Further, fungal colonization leads to balance the redox status of the cell by adjusting the antioxidative enzyme system which in turn protects photosynthetic machinery of the plant from arsenic stress. We observed that fungus has ability to immobilize soluble arsenic and interestingly, it was also observed that fungal colonization restricts most of arsenic in the colonized root while a small fraction of it translocated to shoot of colonized plants. Our study suggests that P. indica protects the paddy (Oryza sativa) from arsenic toxicity by three different mechanisms viz. reducing the availability of free arsenic in the plant environment, bio-transformation of the toxic arsenic salts into insoluble particulate matter and modulating the antioxidative system of the host cell.
Collapse
Affiliation(s)
- Shayan Mohd
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Jagriti Shukla
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology ResearchLucknow, India
- Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR CampusLucknow, India
| | - Aparna S. Kushwaha
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology ResearchLucknow, India
- Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR CampusLucknow, India
| | - Kapil Mandrah
- Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR CampusLucknow, India
- Regulatory Toxicology Group, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Jai Shankar
- Electron Microscope facility, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Nidhi Arjaria
- Electron Microscope facility, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Prem N. Saxena
- Electron Microscope facility, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Ram Narayan
- Central Confocal Facility, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Somendu K. Roy
- Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR CampusLucknow, India
- Regulatory Toxicology Group, CSIR-Indian Institute of Toxicology ResearchLucknow, India
| | - Manoj Kumar
- Environmental Toxicology Group, CSIR-Indian Institute of Toxicology ResearchLucknow, India
- Academy of Scientific and Innovative Research (AcSIR), CSIR-IITR CampusLucknow, India
| |
Collapse
|
57
|
Rizwan M, Ali S, Qayyum MF, Ok YS, Zia-Ur-Rehman M, Abbas Z, Hannan F. Use of Maize (Zea mays L.) for phytomanagement of Cd-contaminated soils: a critical review. ENVIRONMENTAL GEOCHEMISTRY AND HEALTH 2017; 39:259-277. [PMID: 27061410 DOI: 10.1007/s10653-016-9826-0] [Citation(s) in RCA: 72] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2016] [Accepted: 03/31/2016] [Indexed: 05/20/2023]
Abstract
Maize (Zea mays L.) has been widely adopted for phytomanagement of cadmium (Cd)-contaminated soils due to its high biomass production and Cd accumulation capacity. This paper reviewed the toxic effects of Cd and its management by maize plants. Maize could tolerate a certain level of Cd in soil while higher Cd stress can decrease seed germination, mineral nutrition, photosynthesis and growth/yields. Toxicity response of maize to Cd varies with cultivar/varieties, growth medium and stress duration/extent. Exogenous application of organic and inorganic amendments has been used for enhancing Cd tolerance of maize. The selection of Cd-tolerant maize cultivar, crop rotation, soil type, and exogenous application of microbes is a representative agronomic practice to enhance Cd tolerance in maize. Proper selection of cultivar and agronomic practices combined with amendments might be successful for the remediation of Cd-contaminated soils with maize. However, there might be the risk of food chain contamination by maize grains obtained from the Cd-contaminated soils. Thus, maize cultivation could be an option for the management of low- and medium-grade Cd-contaminated soils if grain yield is required. On the other hand, maize can be grown on Cd-polluted soils only if biomass is required for energy production purposes. Long-term field trials are required, including risks and benefit analysis for various management strategies aiming Cd phytomanagement with maize.
Collapse
Affiliation(s)
- Muhammad Rizwan
- Department of Environmental Sciences and Engineering, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan.
| | - Shafaqat Ali
- Department of Environmental Sciences and Engineering, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan
| | - Muhammad Farooq Qayyum
- Department of Soil Sciences, Faculty of Agricultural Sciences and Technology, Bahauddin Zakariya University, Multan, Pakistan
| | - Yong Sik Ok
- Korea Biochar Research Center and Department of Biological Environment, Kangwon National University, Chuncheon, 200-701, Korea
| | - Muhammad Zia-Ur-Rehman
- Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad, 38040, Pakistan
| | - Zaheer Abbas
- Department of Environmental Sciences and Engineering, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan
| | - Fakhir Hannan
- Department of Environmental Sciences and Engineering, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan
| |
Collapse
|
58
|
Santos SGD, Silva PRAD, Garcia AC, Zilli JÉ, Berbara RLL. Dark septate endophyte decreases stress on rice plants. Braz J Microbiol 2017; 48:333-341. [PMID: 28089614 PMCID: PMC5470451 DOI: 10.1016/j.bjm.2016.09.018] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 09/09/2016] [Indexed: 11/20/2022] Open
Abstract
Abiotic stress is one of the major limiting factors for plant development and productivity, which makes it important to identify microorganisms capable of increasing plant tolerance to stress. Dark septate endophytes can be symbionts of plants. In the present study, we evaluated the ability of dark septate endophytes isolates to reduce the effects of water stress in the rice varieties Nipponbare and Piauí. The experiments were performed under gnotobiotic conditions, and the water stress was induced with PEG. Four dark septate endophytes were isolated from the roots of wild rice (Oryza glumaepatula) collected from the Brazilian Amazon. Plant height as well as shoot and root fresh and dry matter were measured. Leaf protein concentrations and antioxidant enzyme activity were also estimated. The dark septate endophytes were grown in vitro in Petri dishes containing culture medium; they exhibited different levels of tolerance to salinity and water stress. The two rice varieties tested responded differently to inoculation with dark septate endophytes. Endophytes promoted rice plant growth both in the presence and in the absence of a water deficit. Decreased oxidative stress in plants in response to inoculation was observed in nearly all inoculated treatments, as indicated by the decrease in antioxidant enzyme activity. Dark septate endophytes fungi were shown to increase the tolerance of rice plants to stress caused by water deficiency.
Collapse
|
59
|
Deng Z, Cao L. Fungal endophytes and their interactions with plants in phytoremediation: A review. CHEMOSPHERE 2017; 168:1100-1106. [PMID: 28029384 DOI: 10.1016/j.chemosphere.2016.10.097] [Citation(s) in RCA: 114] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2016] [Revised: 09/15/2016] [Accepted: 10/24/2016] [Indexed: 05/29/2023]
Abstract
Endophytic microorganisms (including bacteria and fungi) are likely to interact closely with their hosts and are more protected from adverse changes in the environment. The microbiota contribute to plant growth, productivity, carbon sequestration, and phytoremediation. Elevated levels of contaminants (i.e. metals) are toxic to most plants, the plant's metabolism and growth were impaired and their potential for metal phytoextraction is highly restricted. Exploiting endophytic microorganisms to reduce metal toxicity to plants have been investigated to improve phytoremediation efficiencies. Fungi play an important role in organic and inorganic transformation, element cycling, rock and mineral transformations, bioweathering, mycogenic mineral formation, fungal-clay interactions, and metal-fungal interactions. Endophytic fungi also showed potentials to enhance phytoremediation. Compared to bacteria, most fungi exhibit a filamentous growth habit, which provides the ability to adopt both explorative or exploitative growth strategies and form linear organs of aggregated hyphae to protect fungal translocation. However, the information regarding the role of endophytic fungi in phytoremediation are incomplete, this review highlights the taxa, physiological properties, and interaction of endophytic fungi with plants in phytoremediation.
Collapse
Affiliation(s)
- Zujun Deng
- School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China; School of Basic Courses, Guangdong Provincial Key Laboratory of Pharmaceutical Bioactive Substances, Guangdong Pharmaceutical University, Guangzhou, 510006, China
| | - Lixiang Cao
- School of Life Sciences, Sun Yat-sen University, Guangzhou, 510275, China.
| |
Collapse
|
60
|
Yamaji K, Watanabe Y, Masuya H, Shigeto A, Yui H, Haruma T. Root Fungal Endophytes Enhance Heavy-Metal Stress Tolerance of Clethra barbinervis Growing Naturally at Mining Sites via Growth Enhancement, Promotion of Nutrient Uptake and Decrease of Heavy-Metal Concentration. PLoS One 2016; 11:e0169089. [PMID: 28030648 PMCID: PMC5193448 DOI: 10.1371/journal.pone.0169089] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2016] [Accepted: 12/12/2016] [Indexed: 12/23/2022] Open
Abstract
Clethra barbinervis Sieb. et Zucc. is a tree species that grows naturally at several mine sites and seems to be tolerant of high concentrations of heavy metals, such as Cu, Zn, and Pb. The purpose of this study is to clarify the mechanism(s) underlying this species' ability to tolerate the sites' severe heavy-metal pollution by considering C. barbinervis interaction with root fungal endophytes. We measured the heavy metal concentrations of root-zone soil, leaves, branches, and fine roots collected from mature C. barbinervis at Hitachi mine. We isolated fungal endophytes from surface-sterilized root segments, and we examined the growth, and heavy metal and nutrient absorption of C. barbinervis seedlings growing in sterilized mine soil with or without root fungal endophytes. Field analyses showed that C. barbinervis contained considerably high amounts of Cu, Zn, and Pb in fine roots and Zn in leaves. The fungi, Phialocephala fortinii, Rhizodermea veluwensis, and Rhizoscyphus sp. were frequently isolated as dominant fungal endophyte species. Inoculation of these root fungal endophytes to C. barbinervis seedlings growing in sterilized mine soil indicated that these fungi significantly enhanced the growth of C. barbinervis seedlings, increased K uptake in shoots and reduced the concentrations of Cu, Ni, Zn, Cd, and Pb in roots. Without root fungal endophytes, C. barbinervis could hardly grow under the heavy-metal contaminated condition, showing chlorosis, a symptom of heavy-metal toxicity. Our results indicate that the tree C. barbinervis can tolerate high heavy-metal concentrations due to the support of root fungal endophytes including P. fortinii, R. veluwensis, and Rhizoscyphus sp. via growth enhancement, K uptake promotion and decrease of heavy metal concentrations.
Collapse
Affiliation(s)
- Keiko Yamaji
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Yumiko Watanabe
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Hayato Masuya
- Tohoku Research Center, Forestry and Forest Products Research Institute, Morioka, Iwate, Japan
| | - Arisa Shigeto
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Hiroshi Yui
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Toshikatsu Haruma
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| |
Collapse
|
61
|
Yu D, Bu F, Hou J, Kang Y, Yu Z. A morel improved growth and suppressed Fusarium infection in sweet corn. World J Microbiol Biotechnol 2016; 32:192. [PMID: 27718147 DOI: 10.1007/s11274-016-2151-z] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2016] [Accepted: 09/27/2016] [Indexed: 11/29/2022]
Abstract
A post-fire morel collected from Populus simonii stands in Mt. Qingling was identified as Morchella crassipes Mes-20 by using nuclear ribosomal DNA internal transcribed spacer phylogeny. It was inoculated into sweet corn to observe colonized roots in purified culture and in greenhouse experiments. The elongation and maturation zones of sweet corn were remarkably colonized at the cortex intercellular and intracellular cells, vessel cells, and around the Casparian strip, forming ectendomycorrhiza-like structures. Colonization was also observed in the zone of cell division proximal to the root cap. Greenhouse assays with sweet corn showed that this morel stimulated the development of the root system and significantly increased the dry root biomass. M. crassipes also significantly reduced the incidence of Fusarium verticillioides in the kernels of mature ears when inoculated into young ears before Fusarium inoculation and prevented Fusarium infection in corn ears compared with that of the control in the greenhouse. When grown under axenic conditions, M. crassipes produced the phytohormones abscisic acid, indole-3-acetic acid, and salicylic acid. The benefits to plants elicited by M. crassipes may result from these phytohormones which may improve the drought resistance, biomass growth and resistance to Fusarium.
Collapse
Affiliation(s)
- Dan Yu
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Fangfang Bu
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Jiaojiao Hou
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Yongxiang Kang
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Zhongdong Yu
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China.
| |
Collapse
|
62
|
Ma Y, Rajkumar M, Zhang C, Freitas H. Beneficial role of bacterial endophytes in heavy metal phytoremediation. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2016; 174:14-25. [PMID: 26989941 DOI: 10.1016/j.jenvman.2016.02.047] [Citation(s) in RCA: 222] [Impact Index Per Article: 27.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Revised: 02/20/2016] [Accepted: 02/26/2016] [Indexed: 05/10/2023]
Abstract
Phytoremediation is an emerging technology that uses plants and their associated microbes to clean up pollutants from the soil, water and air. In recent years, phytoremediation assisted by bacterial endophytes has been highly recommended for cleaning up of metal polluted soils since endophytic bacteria can alleviate metal toxicity in plant through their own metal resistance system and facilitate plant growth under metal stress. Endophytic bacteria improve plant growth in metal polluted soils in two different ways: 1) directly by producing plant growth beneficial substances including solubilization/transformation of mineral nutrients (phosphate, nitrogen and potassium), production of phytohormones, siderophores and specific enzymes; and 2) indirectly through controlling plant pathogens or by inducing a systemic resistance of plants against pathogens. Besides, they also alter metal accumulation capacity in plants by excreting metal immobilizing extracellular polymeric substances, as well as metal mobilizing organic acids and biosurfactants. The present work aims to review the progress of recent research on the isolation, identification and diversity of metal resistant endophytic bacteria and illustrate various mechanisms responsible for plant growth promotion and heavy metal detoxification/phytoaccumulation/translocation in plants.
Collapse
Affiliation(s)
- Ying Ma
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Calçada Martim de Freitas, 3000-456, Coimbra, Portugal.
| | - Mani Rajkumar
- Department of Life Sciences, Central University of Tamil Nadu, Tiruvarur, 610101, India
| | | | - Helena Freitas
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Calçada Martim de Freitas, 3000-456, Coimbra, Portugal
| |
Collapse
|
63
|
Wang JL, Li T, Liu GY, Smith JM, Zhao ZW. Unraveling the role of dark septate endophyte (DSE) colonizing maize (Zea mays) under cadmium stress: physiological, cytological and genic aspects. Sci Rep 2016; 6:22028. [PMID: 26911444 PMCID: PMC4766571 DOI: 10.1038/srep22028] [Citation(s) in RCA: 79] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2015] [Accepted: 02/04/2016] [Indexed: 11/24/2022] Open
Abstract
A growing body of evidence suggests that plant root-associated fungi such as dark septate endophytes (DSE) can help plants overcome many biotic and abiotic stresses, of great interest is DSE-plant metal tolerance and alleviation capabilities on contaminated soils. However, the tolerance and alleviation mechanisms involved have not yet been elucidated. In the current study, the regulation and physiological response of Zea mays to its root-associated DSE, Exophiala pisciphila was analyzed under increased soil Cd stress (0, 10, 50, 100 mg kg−1). Under Cd stress, DSE inoculation significantly enhanced the activities of antioxidant enzymes and low-molecular weight antioxidants, while also inducing increased Cd accumulation in the cell wall and conversion of Cd into inactive forms by shoot and root specific regulation of genes related to metal uptake, translocation and chelation. Our results showed that DSE colonization resulted in a marked tolerance to Cd, with a significant decrease in cadmium phytotoxicity and a significant increase in maize growth by triggering antioxidant systems, altering metal chemical forms into inactive Cd, and repartitioning subcellular Cd into the cell wall. These results provide comprehensive evidence for the mechanisms by which DSE colonization bioaugments Cd tolerance in maize at physiological, cytological and molecular levels.
Collapse
Affiliation(s)
- Jun-ling Wang
- State Key Laboratory of Conservation and Utilization for Bioresources in Yunnan, Yunnan University, Kunming, 650091 Yunnan, P.R. China.,Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, P.R. China.,First People's Hospital of Qujing City, Qujing Affiliated Hospital of Kunming Medical University, Qujing 655000, China
| | - Tao Li
- State Key Laboratory of Conservation and Utilization for Bioresources in Yunnan, Yunnan University, Kunming, 650091 Yunnan, P.R. China.,Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, P.R. China
| | - Gao-yuan Liu
- State Key Laboratory of Conservation and Utilization for Bioresources in Yunnan, Yunnan University, Kunming, 650091 Yunnan, P.R. China.,Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, P.R. China
| | - Joshua M Smith
- Irving K. Barber School of Arts and Sciences, University of British Columbia Okanagan, Kelowna, British Columbia V1V 1V7, Canada
| | - Zhi-wei Zhao
- State Key Laboratory of Conservation and Utilization for Bioresources in Yunnan, Yunnan University, Kunming, 650091 Yunnan, P.R. China.,Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, P.R. China
| |
Collapse
|
64
|
Ergin Ç, Gök Y, Bayğu Y, Gümral R, Özhak-Baysan B, Döğen A, Öğünç D, Ilkit M, Seyedmousavi S. ATR-FTIR Spectroscopy Highlights the Problem of Distinguishing Between Exophiala dermatitidis and E. phaeomuriformis Using MALDI-TOF MS. MICROBIAL ECOLOGY 2016; 71:339-346. [PMID: 26373644 DOI: 10.1007/s00248-015-0670-z] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2015] [Accepted: 08/28/2015] [Indexed: 06/05/2023]
Abstract
The present study compared two chemical-based methods, namely, matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-TOF MS) and attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy, to understand the misidentification of Exophiala dermatitidis and Exophiala phaeomuriformis. The study utilized 44 E. dermatitidis and 26 E. phaeomuriformis strains, which were partially treated with strong acids and bases for further evaluation. MALDI-TOF MS and ATR-FTIR spectroscopy data of the two Exophiala species were compared. Data groupings were observed for the chromic acid- and nitric acid-treated species when the black yeast sources were categorized as creosoted-oak sleepers, concrete sleepers, or dishwasher isolates. The MALDI-TOF MS data for the metalloenzyme-containing regions were consistent with the ATR-FTIR spectroscopy data. These results indicated that environmental isolates might contain metals not found in human isolates and might interfere with chemical-based identification methods. Therefore, MALDI-TOF MS reference libraries should be created for clinical strains and should exclude petroleum-associated environmental isolates.
Collapse
Affiliation(s)
- Çağrı Ergin
- Department of Microbiology, Faculty of Medicine, Pamukkale University, Denizli, Turkey.
| | - Yaşar Gök
- Chemistry Department, Faculty of Science and Arts, Pamukkale University, Denizli, Turkey
| | - Yasemin Bayğu
- Chemistry Department, Faculty of Science and Arts, Pamukkale University, Denizli, Turkey
| | - Ramazan Gümral
- Department of Microbiology, Gülhane Military Medical Academy, Ankara, Turkey
| | - Betil Özhak-Baysan
- Department of Microbiology, Faculty of Medicine, University of Akdeniz, Antalya, Turkey
| | - Aylin Döğen
- Department of Pharmaceutical Microbiology, Faculty of Pharmacy, University of Mersin, Mersin, Turkey
| | - Dilara Öğünç
- Department of Microbiology, Faculty of Medicine, University of Akdeniz, Antalya, Turkey
| | - Macit Ilkit
- Division of Mycology, Department of Microbiology, Faculty of Medicine, University of Çukurova, Adana, Turkey
| | - Seyedmojtaba Seyedmousavi
- Department of Medical Microbiology and Infectious Diseases, Erasmus University Medical Center, Rotterdam, The Netherlands
- Department of Medical Microbiology, Radboud University Medical Center, Nijmegen, The Netherlands
- Invasive Fungi Research Center, Mazandaran University Medical Center, Sari, Iran
| |
Collapse
|
65
|
Wei YF, Li T, Li LF, Wang JL, Cao GH, Zhao ZW. Functional and transcript analysis of a novel metal transporter gene EpNramp from a dark septate endophyte (Exophiala pisciphila). ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2016; 124:363-368. [PMID: 26595509 DOI: 10.1016/j.ecoenv.2015.11.008] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2015] [Revised: 11/04/2015] [Accepted: 11/05/2015] [Indexed: 05/13/2023]
Abstract
Various metal transporters mediate sub-cellular sequestration of diverse metal ions, contribute to cellular metal tolerance, and control metal partitioning, particularly under conditions of high rates of metal influx into organisms. In the current study, a ubiquitous and evolutionary conserved metal transporter gene, homology to natural resistance associated macrophage protein (Nramp), was cloned from a metal-tolerant isolate of dark septate endophyte (DSE, Exophiala pisciphila), and its functional and transcript characterization were analyzed. The full-length Nramp gene from E. pisciphila (named EpNramp) was 1716 bp and expected to encode a polypeptide of 571 amino acid residues. EpNramp fused to green fluorescent protein suggested that EpNramp was a plasma membrane metal transporter, which was consistent with the results of bioinformatics analysis with 11 transmembrane domains. Yeast functional complementation revealed that EpNramp could complement the growth defect of Fe-uptake yeast mutant (fet3fet4 double mutant) by mediating the transport of Fe(2+). Expression of EpNramp increased Cd(2+) sensitivity and Cd(2+) accumulation in yeast. In addition, qPCR data revealed that E. pisciphila significantly down-regulated EpNramp expression with elevated Cd(2+) exposure. Altogether, EpNramp is a bivalent cation transporter localized in cell membrane, which is necessary for efficient translocation of both Fe and Cd, and its activities partly attributed to the tolerance of DSE to toxic and excessive Cd(2+) supplements.
Collapse
Affiliation(s)
- Yun-Fang Wei
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, PR China; Kunming Police Dog Base of the Ministry of Public Security, Kunming, 650204 Yunnan, PR China.
| | - Tao Li
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, PR China.
| | - Ling-Fei Li
- College of Food Science and Technology, Yunnan Agricultural University, Kunming, 650201 Yunnan, PR China.
| | - Jun-Ling Wang
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, PR China.
| | - Guan-Hua Cao
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, PR China.
| | - Zhi-Wei Zhao
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, 650091 Yunnan, PR China.
| |
Collapse
|
66
|
Ramos-Garza J, Bustamante-Brito R, Ángeles de Paz G, Medina-Canales MG, Vásquez-Murrieta MS, Wang ET, Rodríguez-Tovar AV. Isolation and characterization of yeasts associated with plants growing in heavy-metal- and arsenic-contaminated soils. Can J Microbiol 2015; 62:307-19. [PMID: 26936448 DOI: 10.1139/cjm-2015-0226] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Yeasts were quantified and isolated from the rhizospheres of 5 plant species grown at 2 sites of a Mexican region contaminated with arsenic, lead, and other heavy metals. Yeast abundance was about 10(2) CFU/g of soil and 31 isolates were obtained. On the basis of the phylogenetic analysis of 26S rRNA and internal transcribed spacer fragment, 6 species were identified within the following 5 genera: Cryptococcus (80.64%), Rhodotorula (6.45%), Exophiala (6.45%), Trichosporon (3.22%), and Cystobasidium (3.22%). Cryptococcus spp. was the predominant group. Pectinases (51.6%), proteases (51.6%), and xylanases (41.9%) were the enzymes most common, while poor production of siderophores (16.1%) and indole acetic acid (9.67%) was detected. Isolates of Rhodotorula mucilaginosa and Cystobasidium sloffiae could promote plant growth and seed germination in a bioassay using Brassica juncea. Resistance of isolates by arsenic and heavy metals was as follows: As(3+) ≥ 100 mmol/L, As(5+) ≥ 30 mmol/L, Zn(2+) ≥ 2 mmol/L, Pb(2+) ≥ 1.2 mmol/L, and Cu(2+) ≥ 0.5 mmol/L. Strains of Cryptococcus albidus were able to reduce arsenate (As(5+)) into arsenite (As(3+)), but no isolate was capable of oxidizing As(3+). This is the first study on the abundance and identification of rhizosphere yeasts in a heavy-metal- and arsenic-contaminated soil, and of the reduction of arsenate by the species C. albidus.
Collapse
Affiliation(s)
- Juan Ramos-Garza
- a Laboratorio de Micología General y Médica, Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas (ENCB), Instituto Politécnico Nacional (IPN), Prolongación de Carpio y Plan de Ayala s/n, 11340 Mexico City, Mexico.,b Laboratorio de Ecología Microbiana, Departamento de Microbiología, ENCB, IPN, 11340 Mexico City, Mexico
| | - Rafael Bustamante-Brito
- a Laboratorio de Micología General y Médica, Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas (ENCB), Instituto Politécnico Nacional (IPN), Prolongación de Carpio y Plan de Ayala s/n, 11340 Mexico City, Mexico
| | - Gabriela Ángeles de Paz
- c Laboratorio de Nematología Agrícola, Departamento de Parasitología, ENCB, IPN, 11340 Mexico City, Mexico
| | - Ma Gabriela Medina-Canales
- c Laboratorio de Nematología Agrícola, Departamento de Parasitología, ENCB, IPN, 11340 Mexico City, Mexico
| | | | - En Tao Wang
- b Laboratorio de Ecología Microbiana, Departamento de Microbiología, ENCB, IPN, 11340 Mexico City, Mexico
| | - Aída Verónica Rodríguez-Tovar
- a Laboratorio de Micología General y Médica, Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas (ENCB), Instituto Politécnico Nacional (IPN), Prolongación de Carpio y Plan de Ayala s/n, 11340 Mexico City, Mexico
| |
Collapse
|
67
|
Zhan F, He Y, Li Y, Li T, Yang YY, Toor GS, Zhao Z. Subcellular distribution and chemical forms of cadmium in a dark septate endophyte (DSE), Exophiala pisciphila. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:17897-17905. [PMID: 26165995 DOI: 10.1007/s11356-015-5012-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2015] [Accepted: 07/01/2015] [Indexed: 06/04/2023]
Abstract
Our objective was to understand the cadmium (Cd) tolerance mechanisms by investigating the subcellular distribution, chemical forms of Cd and adsorptive groups in the mycelia of Exophiala pisciphila. We grew E. pisciphila in the liquid media with increasing Cd concentrations (0, 25, 50, 100, 200, and 400 mg L(-1)). Increased Cd in the media caused a proportional increase in the Cd uptake by E. pisciphila. Subcellular distribution indicated that 81 to 97% of Cd was associated with the cell walls. The largest amount and proportion (45-86%) of Cd was extracted with 2% acetic acid, and a concentration-dependent extraction was observed, both of which suggest that Cd-phosphate complexes were the major chemical form in E. pisciphila. A large distribution of phosphate and Cd on the mycelia surface was observed by scanning electron microscopy-energy dispersive spectrometer (SEM-EDS). The precipitates associated with the mycelia were observed to contain Cd by transmission electron microscopy-energy dispersive X-ray spectroscopy (TEM-EDX). Fourier transform infrared (FTIR) identified that hydroxyl, amine, carboxyl, and phosphate groups were responsible for binding Cd. We conclude that Cd associated with cell walls and integrated with phosphate might be responsible for the tolerance of E. pisciphila to Cd.
Collapse
Affiliation(s)
- Fangdong Zhan
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
- Laboratory for Conservation and Utilization of Bio-Resources, and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, People's Republic of China
| | - Yongmei He
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Yuan Li
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, People's Republic of China
| | - Tao Li
- Laboratory for Conservation and Utilization of Bio-Resources, and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, People's Republic of China
| | - Yun-Ya Yang
- Soil and Water Quality Laboratory, Gulf Coast Research and Education Center, University of Florida, Wimauma, FL, 33598, USA
| | - Gurpal S Toor
- Soil and Water Quality Laboratory, Gulf Coast Research and Education Center, University of Florida, Wimauma, FL, 33598, USA
| | - Zhiwei Zhao
- Laboratory for Conservation and Utilization of Bio-Resources, and Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, People's Republic of China.
| |
Collapse
|
68
|
Cheikh-Ali Z, Glynou K, Ali T, Ploch S, Kaiser M, Thines M, Bode HB, Maciá-Vicente JG. Diversity of exophillic acid derivatives in strains of an endophytic Exophiala sp. PHYTOCHEMISTRY 2015; 118:83-93. [PMID: 26296744 DOI: 10.1016/j.phytochem.2015.08.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2015] [Revised: 08/03/2015] [Accepted: 08/12/2015] [Indexed: 06/04/2023]
Abstract
Members of the fungal genus Exophiala are common saprobes in soil and water environments, opportunistic pathogens of animals, or endophytes in plant roots. Their ecological versatility could imply a capacity to produce diverse secondary metabolites, but only a few studies have aimed at characterizing their chemical profiles. Here, we assessed the secondary metabolites produced by five Exophiala sp. strains of a particular phylotype, isolated from roots of Microthlaspi perfoliatum growing in different European localities. Exophillic acid and two previously undescribed compounds were isolated from these strains, and their structures were elucidated by spectroscopic methods using MS, 1D and 2D NMR. Bioassays revealed a weak activity of these compounds against disease-causing protozoa and mammalian cells. In addition, 18 related structures were identified by UPLC/MS based on comparisons with the isolated structures. Three Exophiala strains produced derivatives containing a β-d-glucopyranoside moiety, and their colony morphology was distinct from the other two strains, which produced derivatives lacking β-d-glucopyranoside. Whether the chemical/morphological strain types represent variants of the same genotype or independent genetic populations within Exophiala remains to be evaluated.
Collapse
Affiliation(s)
- Zakaria Cheikh-Ali
- Merck Stiftungsprofessur für Molekulare Biotechnologie, Fachbereich Biowissenschaften, Goethe Universität Frankfurt, 60438 Frankfurt am Main, Germany
| | - Kyriaki Glynou
- Institute of Ecology, Evolution and Diversity, Goethe Universität Frankfurt, Max-von-Laue-Str. 13, 60438 Frankfurt am Main, Germany
| | - Tahir Ali
- Biodiversity and Climate Research Centre (BiK-F), Senckenberganlage 25, 60325 Frankfurt am Main, Germany
| | - Sebastian Ploch
- Biodiversity and Climate Research Centre (BiK-F), Senckenberganlage 25, 60325 Frankfurt am Main, Germany
| | - Marcel Kaiser
- Swiss Tropical and Public Health Institute, Parasite Chemotherapy, Socinstrasse 57, P.O. Box, 4002 Basel, Switzerland
| | - Marco Thines
- Institute of Ecology, Evolution and Diversity, Goethe Universität Frankfurt, Max-von-Laue-Str. 13, 60438 Frankfurt am Main, Germany; Biodiversity and Climate Research Centre (BiK-F), Senckenberganlage 25, 60325 Frankfurt am Main, Germany
| | - Helge B Bode
- Merck Stiftungsprofessur für Molekulare Biotechnologie, Fachbereich Biowissenschaften, Goethe Universität Frankfurt, 60438 Frankfurt am Main, Germany; Buchmann Institute for Molecular Life Sciences (BMLS), Goethe Universität Frankfurt, 60438 Frankfurt am Main, Germany.
| | - Jose G Maciá-Vicente
- Institute of Ecology, Evolution and Diversity, Goethe Universität Frankfurt, Max-von-Laue-Str. 13, 60438 Frankfurt am Main, Germany.
| |
Collapse
|
69
|
Yang Y, Liang Y, Ghosh A, Song Y, Chen H, Tang M. Assessment of arbuscular mycorrhizal fungi status and heavy metal accumulation characteristics of tree species in a lead-zinc mine area: potential applications for phytoremediation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:13179-93. [PMID: 25929455 DOI: 10.1007/s11356-015-4521-8] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2014] [Accepted: 04/09/2015] [Indexed: 05/15/2023]
Abstract
To select suitable tree species associated with arbuscular mycorrhizal fungi (AMF) for phytoremediation of heavy metal (HM) contaminated area, we measured the AMF status and heavy metal accumulation in plant tissues in a lead-zinc mine area, Northwest China. All 15 tree species were colonized by AM fungi in our investigation. The mycorrhizal frequency (F%), mycorrhizal colonization intensity (M%) and spore density (SP) reduced concomitantly with increasing Pb and Zn levels; however, positive correlations were found between arbuscule density (A%) and soil total/DTPA-extractable Pb concentrations. The average concentrations of Pb, Zn, Cu and Cd in plant samples were 168.21, 96.61, 41.06, and 0.79 mg/kg, respectively. Populus purdomii Rehd. accumulated the highest concentrations of Zn (432.08 mg/kg) and Cu (140.85 mg/kg) in its leaves. Considerable amount of Pb (712.37 mg/kg) and Cd (3.86 mg/kg) were concentrated in the roots of Robinia pseudoacacia Linn. and Populus simonii Carr., respectively. Plants developed different strategies to survive in HM stress environment: translocating more essential metals (Zn and Cu) into the aerial parts, while retaining more toxic heavy metals (Pb and Cd) in the roots to protect the above-ground parts from damage. According to the translocation factor (TF), bioconcentration factor (BCF), growth rate and biomass production, five tree species (Ailanthus altissima (Mill.) Swingle, Cotinus coggygria Scop., P. simonii, P. purdomii, and R. pseudoacacia) were considered to be the most suitable candidates for phytoextraction and/or phytostabilization purposes. Redundancy analysis (RDA) showed that the efficiency of phytoremediation was enhanced by AM symbioses, and soil pH, Pb, Zn, and Cd levels were the main factors influencing the HM accumulation characteristics of plants.
Collapse
Affiliation(s)
- Yurong Yang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Xianyang, Shaanxi, 712100, China
| | | | | | | | | | | |
Collapse
|
70
|
Shen M, Zhao DK, Qiao Q, Liu L, Wang JL, Cao GH, Li T, Zhao ZW. Identification of glutathione S-transferase (GST) genes from a dark septate endophytic fungus (Exophiala pisciphila) and their expression patterns under varied metals stress. PLoS One 2015; 10:e0123418. [PMID: 25884726 PMCID: PMC4401685 DOI: 10.1371/journal.pone.0123418] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2014] [Accepted: 02/18/2015] [Indexed: 11/18/2022] Open
Abstract
Glutathione S-transferases (GSTs) compose a family of multifunctional enzymes that play important roles in the detoxification of xenobiotics and the oxidative stress response. In the present study, twenty four GST genes from the transcriptome of a metal-tolerant dark septate endophyte (DSE), Exophiala pisciphila, were identified based on sequence homology, and their responses to various heavy metal exposures were also analyzed. Phylogenetic analysis showed that the 24 GST genes from E. pisciphila (EpGSTs) were divided into eight distinct classes, including seven cytosolic classes and one mitochondrial metaxin 1-like class. Moreover, the variable expression patterns of these EpGSTs were observed under different heavy metal stresses at their effective concentrations for inhibiting growth by 50% (EC50). Lead (Pb) exposure caused the up-regulation of all EpGSTs, while cadmium (Cd), copper (Cu) and zinc (Zn) treatments led to the significant up-regulation of most of the EpGSTs (p < 0.05 to p < 0.001). Furthermore, although heavy metal-specific differences in performance were observed under various heavy metals in Escherichia coli BL21 (DE3) transformed with EpGSTN-31, the over-expression of this gene was able to enhance the heavy metal tolerance of the host cells. These results indicate that E. Pisciphila harbored a diverse of GST genes and the up-regulated EpGSTs are closely related to the heavy metal tolerance of E. pisciphila. The study represents the first investigation of the GST family in E. pisciphila and provides a primary interpretation of heavy metal detoxification for E. pisciphila.
Collapse
Affiliation(s)
- Mi Shen
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, Yunnan, China
| | - Da-Ke Zhao
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, Yunnan, China; School of Agriculture, Yunnan University, Kunming, Yunnan, China
| | - Qin Qiao
- School of Agriculture, Yunnan University, Kunming, Yunnan, China
| | - Lei Liu
- School of Life Science, Yunnan University, Kunming, Yunnan, China
| | - Jun-Ling Wang
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, Yunnan, China
| | - Guan-Hua Cao
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, Yunnan, China
| | - Tao Li
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, Yunnan, China
| | - Zhi-Wei Zhao
- Key Laboratory of Conservation and Utilization for Bioresources and Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, Yunnan University, Kunming, Yunnan, China; School of Agriculture, Yunnan University, Kunming, Yunnan, China
| |
Collapse
|
71
|
An H, Liu Y, Zhao X, Huang Q, Yuan S, Yang X, Dong J. Characterization of cadmium-resistant endophytic fungi from Salix variegata Franch. in Three Gorges Reservoir Region, China. Microbiol Res 2015; 176:29-37. [PMID: 26070690 DOI: 10.1016/j.micres.2015.03.013] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2015] [Revised: 03/08/2015] [Accepted: 03/23/2015] [Indexed: 10/23/2022]
Abstract
The community and Cd-resistance of endophytic fungi from roots of Salix variegata Franch. collected from the water-level-fluctuation zone of Three Gorges Reservoir Region, China, were investigated. A total of 53 strains were isolated and identified to 13 morphotaxa, in which Chromosporium, Fusarium and Gonatobotrys were dominant genera. Among them, 27 isolates were selected to measure their resistance to 0.02 mg ml(-1) Cd(2+) and 11 were growth stimulated (Tolerance index>100%). Of these active isolates, four dark septate endophyte (DSE) isolates (Paraphaeosphaeria sp. SR46, Pyrenochaeta sp. SR35, Rhizopycnis vagum SR37 and R. vagum SR44) were further tested for minimum inhibitory concentrations (MICs) against Cd and SR46 was found to be the most tolerant isolate with MIC of 0.39 mg ml(-1). Additionally, the maximum uptake values of these DSEs ranged from 3.01 to 7.89 mg g(-1), but there was no significant correlation between metal uptake with fungal biomass and metal tolerance. Subsequently, a pot experiment was conducted for investigating the impact of SR46 on corn seedlings in Cd-enriched soil. The results obtained suggested that SR46 reduced the Cd bioaccumulation of plant under low (100 mg kg(-1)) Cd stress and enhanced the Cd translocation from root zone to aerial parts under high (200 mg kg(-1)) Cd stress. Besides, it promoted plant growth without Cd stress. These findings indicated S. variegata harbors an endophytic fungal flora showing a high genetic diversity as well as a high level of metal resistance to Cd that has potential values in cadmium cycling and restoration of plant, soil and water system.
Collapse
Affiliation(s)
- Hongmei An
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region of Ministry of Education, School of Life Science, Southwest University, Chongqing 400715, China
| | - Yan Liu
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region of Ministry of Education, School of Life Science, Southwest University, Chongqing 400715, China
| | - Xinfei Zhao
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region of Ministry of Education, School of Life Science, Southwest University, Chongqing 400715, China
| | - Qian Huang
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region of Ministry of Education, School of Life Science, Southwest University, Chongqing 400715, China
| | - Shenhong Yuan
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region of Ministry of Education, School of Life Science, Southwest University, Chongqing 400715, China
| | - Xingyong Yang
- The College of Life Science, Chongqing Normal University, Chongqing 401331, China.
| | - Jinyan Dong
- Key Laboratory of Eco-environments in Three Gorges Reservoir Region of Ministry of Education, School of Life Science, Southwest University, Chongqing 400715, China.
| |
Collapse
|
72
|
Zhan F, He Y, Li T, Yang YY, Toor GS, Zhao Z. Tolerance and antioxidant response of a dark septate endophyte (DSE), Exophiala pisciphila, to cadmium stress. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2015; 94:96-102. [PMID: 25323040 DOI: 10.1007/s00128-014-1401-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2014] [Accepted: 10/09/2014] [Indexed: 06/04/2023]
Abstract
The growth, oxidative damage and antioxidant response of Exophiala pisciphila ACCC32496, a dark septate endophyte isolated from an abandoned lead-zinc mining area, were measured at cadmium (Cd) concentrations of 0, 25, 50, 100, 200 and 400 mg L(-1). The EC50 values of E. pisciphila ACCC32496 to Cd were 332.2 mg L(-1) after 30 days on solid medium and 111.2 mg L(-1) after 7 days in liquid medium. Cd stress markedly stimulated the production of superoxide anion, H2O2 and malondialdehyde in the fungal mycelia. The activities of superoxide dismutase and catalase reached their maxima at 100 mg L(-1) Cd. The glutathione and non-protein thiol contents, along with the total antioxidant capability, reached their maxima at 50 mg L(-1) Cd. Low Cd concentrations induced a noticeable increase in antioxidant defense, while high Cd concentrations decreased the antioxidant defense.
Collapse
Affiliation(s)
- Fangdong Zhan
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, China
| | | | | | | | | | | |
Collapse
|
73
|
Zhao D, Li T, shen M, Wang J, Zhao Z. Diverse strategies conferring extreme cadmium (Cd) tolerance in the dark septate endophyte (DSE), Exophiala pisciphila: Evidence from RNA-seq data. Microbiol Res 2015; 170:27-35. [DOI: 10.1016/j.micres.2014.09.005] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2014] [Revised: 09/10/2014] [Accepted: 09/17/2014] [Indexed: 12/17/2022]
|
74
|
Babu AG, Shea PJ, Oh BT. Trichoderma sp. PDR1-7 promotes Pinus sylvestris reforestation of lead-contaminated mine tailing sites. THE SCIENCE OF THE TOTAL ENVIRONMENT 2014; 476-477:561-567. [PMID: 24496029 DOI: 10.1016/j.scitotenv.2013.12.119] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2013] [Revised: 12/28/2013] [Accepted: 12/28/2013] [Indexed: 06/03/2023]
Abstract
Vegetation is critical to stabilize and remediate mine tailing sites, but plant growth is often poor due to toxicity from heavy metal(loid)s (HMs). A non-symbiotic endophytic fungus, Trichoderma sp. PDR1-7, isolated from Pb-contaminated mine tailing soil, exhibited both high tolerance to HMs and desirable plant growth-promoting characteristics. PDR1-7 promoted HM solubilization in mine tailing soil and removed significant amounts of Pb and other HMs from liquid media containing single and multiple metals. Pb removal efficiency increased with initial pH from 4 to 6 and with Pb concentration from 100 to 125 mg L(-1). Inoculating soil with PDR1-7 significantly increased nutrient availability and seedling growth, chlorophyll and protein contents, as well as antioxidative enzyme (superoxide dismutase) activity. A decrease in malondialdehyde indicated less oxidative stress. HM concentrations were much higher in Pinus sylvestris roots when PDR1-7 was present. These observations suggest the utility of Trichoderma sp. PDR1-7 for pine reforestation and phytoremediation of Pb-contaminated mine soil.
Collapse
Affiliation(s)
- A Giridhar Babu
- Division of Biotechnology, Advanced Institute of Environment and Bioscience, College of Environmental and Bioresource Sciences, Chonbuk National University, Iksan 570-752, Republic of Korea
| | - Patrick J Shea
- School of Natural Resources, University of Nebraska-Lincoln, Lincoln, NE 68583-0817, USA
| | - Byung-Taek Oh
- Division of Biotechnology, Advanced Institute of Environment and Bioscience, College of Environmental and Bioresource Sciences, Chonbuk National University, Iksan 570-752, Republic of Korea.
| |
Collapse
|
75
|
Areco MM, Saleh-Medina L, Trinelli MA, Marco-Brown JL, dos Santos Afonso M. Adsorption of Cu(II), Zn(II), Cd(II) and Pb(II) by dead Avena fatua biomass and the effect of these metals on their growth. Colloids Surf B Biointerfaces 2013; 110:305-12. [DOI: 10.1016/j.colsurfb.2013.04.035] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2012] [Revised: 04/05/2013] [Accepted: 04/17/2013] [Indexed: 10/26/2022]
|
76
|
Diao YH, Li T, Zhao ZW. Zinc Accumulation Characteristics of Two Exophiala Strains and Their Antioxidant Response to Zn<sup>2+</sup> Stress. ACTA ACUST UNITED AC 2013. [DOI: 10.4236/jep.2013.44a003] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
77
|
Zhang HH, Tang M, Chen H, Wang YJ. Effects of a dark-septate endophytic isolate LBF-2 on the medicinal plant Lycium barbarum L. J Microbiol 2012; 50:91-6. [PMID: 22367942 DOI: 10.1007/s12275-012-1159-9] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2011] [Accepted: 09/12/2011] [Indexed: 11/24/2022]
Abstract
Dark septate endophytes (DSE) are ubiquitous root associated fungi; however, our understanding of their ecological function remains unclear. Here, we investigated the positive effect of a DSE fungus on its host plant Lycium barbarum L. A DSE isolate, LBF-2, isolated from the roots of L. barbarum, was inoculated onto the roots of plants, which were grown under greenhouse conditions for five weeks. The result of molecular analyses of internal transcribed spacer regions indicated that LBF-2 was 96% similar to Paraphoma chrysanthemicola. Melanized septate hyphae were observed in the root cortical cells of L. barbarum using a light microscope. Inoculation with LBF-2 increased the total biomass by 39.2% and also enhanced chlorophyll fluorescence. Inoculation increased the concentration of total chlorophyll by 22.8% and of chlorophyll a by 21.3%, relative to uninoculated controls. These data indicate that the LBF-2 isolate might be used to facilitate the cultivation of L. barbarum, which has medicinal applications.
Collapse
Affiliation(s)
- Hai-Han Zhang
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, 712100, P. R. China
| | | | | | | |
Collapse
|