51
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Filatov M, Paolino M, Min SK, Choi CH. Design and photoisomerization dynamics of a new family of synthetic 2-stroke light driven molecular rotary motors. Chem Commun (Camb) 2019; 55:5247-5250. [DOI: 10.1039/c9cc01955c] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Synthetic 2-stroke light driven molecular rotary motors with ultrafast function and high quantum efficiency.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry
- Kyungpook National University
- Daegu 702-701
- South Korea
| | - Marco Paolino
- Dipartimento di Biotecnologie
- Chimica e Farmacia (Dipartimento di Eccellenza 2018-2022)
- Università di Siena
- 53100 Siena
- Italy
| | - Seung Kyu Min
- Department of Chemistry
- School of Natural Sciences
- Ulsan National Institute of Science and Technology
- Ulsan 44919
- South Korea
| | - Cheol Ho Choi
- Department of Chemistry
- Kyungpook National University
- Daegu 702-701
- South Korea
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52
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Chen L, Qi F, Jitapunkul K, Zhao Y, Zhang R, Van Hove MA. Intramolecular Torque Study of a Molecular Rotation Stimulated by Electron Injection and Extraction. J Phys Chem A 2018; 122:7614-7619. [PMID: 30192542 DOI: 10.1021/acs.jpca.8b04368] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Rotation-inducing torque based on interatomic forces is a true indicator of internal molecular rotations. We use the induced intramolecular torque to study the underlying rotational mechanism stimulated by an electron injection or extraction for the rotor molecule 9-(2,4,7-trimethyl-2,3-dihydro-1 H-inden-1-ylidene)-9 H-fluorene, which consists of a "rotator" fragment and a "stator" fragment. The results show that the charged molecule in a quartet spin state can rotate internally, while that in the doublet state cannot. The torque on the rotator in the quartet state always maintains unidirectional rotation. In addition, the attachment/extraction of an electron leads to the reduction of the rotational energy barrier by about 18 kcal/mol, facilitating a more favorable molecular rotation than in the neutral singlet state. Our finding provides a molecular-level understanding of various transformation pathways for experimental designs and further demonstrates the effectiveness of the torque approach.
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Affiliation(s)
- Lei Chen
- Department of Physics , City University of Hong Kong , Hong Kong SAR , China.,School of Medicine , Yangzhou University , Yangzhou 225001 , China
| | - Fei Qi
- Institute of Computational and Theoretical Studies & Department of Physics , Hong Kong Baptist University , Hong Kong SAR , China
| | - Kulpavee Jitapunkul
- Department of Physics , City University of Hong Kong , Hong Kong SAR , China
| | - Yanling Zhao
- Department of Physics , City University of Hong Kong , Hong Kong SAR , China.,Shenzhen Research Institute , City University of Hong Kong , Shenzhen 518057 , China
| | - Ruiqin Zhang
- Department of Physics , City University of Hong Kong , Hong Kong SAR , China.,Shenzhen Research Institute , City University of Hong Kong , Shenzhen 518057 , China
| | - Michel A Van Hove
- Institute of Computational and Theoretical Studies & Department of Physics , Hong Kong Baptist University , Hong Kong SAR , China
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53
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Filatov M, Paolino M, Min SK, Kim KS. Fulgides as Light-Driven Molecular Rotary Motors: Computational Design of a Prototype Compound. J Phys Chem Lett 2018; 9:4995-5001. [PMID: 30111107 DOI: 10.1021/acs.jpclett.8b02268] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
A new family of light-driven molecular rotary motors utilizing the fulgide motif is proposed and its prototype molecule is studied by quantum chemical calculations and nonadiabatic molecular dynamics simulations. The new motor performs pure unidirectional axial rotation of the rotor blade with high quantum efficiency (ϕ ∼ 0.55-0.68) and ultrafast dynamics (⟨ t⟩ S1 ∼ 200-300 fs) of its successive photoisomerization steps. The photocyclization reaction typical of fulgide compounds is blocked by the design of the new motor and never occurred in the molecular dynamics simulations. The new motors can be synthesized from easily available precursors. In view of its remarkable photoisomerization ability, the new motor represents a prospective class of compounds for the use in nanosized molecular devices.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, School of Natural Sciences , Ulsan National Institute of Science and Technology (UNIST) , Ulsan 44919 , Korea
| | - Marco Paolino
- Dipartimento di Biotecnologie, Chimica e Farmacia (Dipartimento di Eccellenza 2018-1022) , Università di Siena , Via A. Moro 2 , 53100 Siena , Italy
| | - Seung Kyu Min
- Department of Chemistry, School of Natural Sciences , Ulsan National Institute of Science and Technology (UNIST) , Ulsan 44919 , Korea
| | - Kwang S Kim
- Department of Chemistry, School of Natural Sciences , Ulsan National Institute of Science and Technology (UNIST) , Ulsan 44919 , Korea
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54
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Wang J, Durbeej B. Toward Fast and Efficient Visible-Light-Driven Molecular Motors: A Minimal Design. ChemistryOpen 2018; 7:583-589. [PMID: 30083493 PMCID: PMC6070775 DOI: 10.1002/open.201800089] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2018] [Indexed: 12/16/2022] Open
Abstract
A key goal in the development of light-driven rotary molecular motors is to facilitate their usage in biology and medicine by shifting the required irradiation wavelengths from the UV regime to the nondestructive visible regime. Although some progress has been made toward this goal, most available visible-light-driven motors either have relatively low quantum yields or require that thermal steps follow the photoisomerizations that underlie the rotary motion. Here, a minimal design for visible-light-driven motors without these drawbacks is presented and evaluated on the basis of state-of-the-art quantum chemical calculations and molecular dynamics simulations. The design, featuring dihydropyridinium and cyclohexenylidene motifs and comprising only five conjugated double bonds, is found to produce a full 360° rotation through fast photoisomerizations (excited-state lifetimes of ≈170-250 fs) powered by photons with energies well below 3 eV.
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Affiliation(s)
- Jun Wang
- Division of Theoretical Chemistry, IFMLinköping UniversitySE-581 83LinköpingSweden
| | - Bo Durbeej
- Division of Theoretical Chemistry, IFMLinköping UniversitySE-581 83LinköpingSweden
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55
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56
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Abstract
The field of synthetic molecular machines has quickly evolved in recent years, growing from a fundamental curiosity to a highly active field of chemistry. Many different applications are being explored in areas such as catalysis, self-assembled and nanostructured materials, and molecular electronics. Rotary molecular motors hold great promise for achieving dynamic control of molecular functions as well as for powering nanoscale devices. However, for these motors to reach their full potential, many challenges still need to be addressed. In this paper we focus on the design principles of rotary motors featuring a double-bond axle and discuss the major challenges that are ahead of us. Although great progress has been made, further design improvements, for example in terms of efficiency, energy input, and environmental adaptability, will be crucial to fully exploit the opportunities that these rotary motors offer.
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57
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Hall CR, Browne WR, Feringa BL, Meech SR. Mapping the Excited‐State Potential Energy Surface of a Photomolecular Motor. Angew Chem Int Ed Engl 2018; 57:6203-6207. [DOI: 10.1002/anie.201802126] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2018] [Indexed: 01/05/2023]
Affiliation(s)
| | - Wesley R. Browne
- Molecular Inorganic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
| | - Ben L. Feringa
- Synthetic Organic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
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58
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Hall CR, Browne WR, Feringa BL, Meech SR. Mapping the Excited‐State Potential Energy Surface of a Photomolecular Motor. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201802126] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
| | - Wesley R. Browne
- Molecular Inorganic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
| | - Ben L. Feringa
- Synthetic Organic Chemistry Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen Netherlands
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59
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Wilcken R, Schildhauer M, Rott F, Huber LA, Guentner M, Thumser S, Hoffmann K, Oesterling S, de Vivie-Riedle R, Riedle E, Dube H. Complete Mechanism of Hemithioindigo Motor Rotation. J Am Chem Soc 2018; 140:5311-5318. [DOI: 10.1021/jacs.8b02349] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Roland Wilcken
- Lehrstuhl für BioMolekulare Optik, Ludwig-Maximilians-Universität München, Oettingenstrasse 67, D-80538 München, Germany
| | | | | | | | | | | | | | | | | | - Eberhard Riedle
- Lehrstuhl für BioMolekulare Optik, Ludwig-Maximilians-Universität München, Oettingenstrasse 67, D-80538 München, Germany
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60
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Xu C, Gu FL, Zhu C. Ultrafast intersystem crossing for nitrophenols: ab initio nonadiabatic molecular dynamics simulation. Phys Chem Chem Phys 2018; 20:5606-5616. [DOI: 10.1039/c7cp08601f] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ultrafast intersystem crossing mechanisms for two p- and m-nitrophenol groups (PNP and MNP) have been investigated using ab initio nonadiabatic molecular dynamics simulations at the 6SA-CASSCF level of theory.
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Affiliation(s)
- Chao Xu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education; School of Chemistry & Environment of South China Normal University
- Guangzhou 51006
- P. R. China
| | - Feng Long Gu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education; School of Chemistry & Environment of South China Normal University
- Guangzhou 51006
- P. R. China
| | - Chaoyuan Zhu
- Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education; School of Chemistry & Environment of South China Normal University
- Guangzhou 51006
- P. R. China
- Department of Applied Chemistry, Institute of Molecular Science and Center for Interdisciplinary Molecular Science, National Chiao-Tung University
- Hsinchu 30010
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61
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Beekmeyer R, Parkes MA, Ridgwell L, Riley JW, Chen J, Feringa BL, Kerridge A, Fielding HH. Unravelling the electronic structure and dynamics of an isolated molecular rotary motor in the gas-phase. Chem Sci 2017; 8:6141-6148. [PMID: 28989644 PMCID: PMC5627543 DOI: 10.1039/c7sc01997a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Accepted: 06/27/2017] [Indexed: 11/21/2022] Open
Abstract
Light-driven molecular motors derived from chiral overcrowded alkenes are an important class of compounds in which sequential photochemical and thermal rearrangements result in unidirectional rotation of one part of the molecule with respect to another. Here, we employ anion photoelectron spectroscopy to probe the electronic structure and dynamics of a unidirectional molecular rotary motor anion in the gas-phase and quantum chemistry calculations to guide the interpretation of our results. We find that following photoexcitation of the first electronically excited state, the molecule rotates around its axle and some population remains on the excited potential energy surface and some population undergoes internal conversion back to the electronic ground state. These observations are similar to those observed in time-resolved measurements of rotary molecular motors in solution. This work demonstrates the potential of anion photoelectron spectroscopy for studying the electronic structure and dynamics of molecular motors in the gas-phase, provides important benchmarks for theory and improves our fundamental understanding of light-activated molecular rotary motors, which can be used to inform the design of new photoactivated nanoscale devices.
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Affiliation(s)
- Reece Beekmeyer
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Michael A Parkes
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Luke Ridgwell
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Jamie W Riley
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
| | - Jiawen Chen
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry , University of Groningen , Nijenborgh 4 , 9747 AG Groningen , The Netherlands
| | - Andrew Kerridge
- Department of Chemistry , Lancaster University , Lancaster , LA1 4YB , UK
| | - Helen H Fielding
- Department of Chemistry , University College London , 20 Gordon Street , London , WC1H 0AJ , UK .
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62
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Oruganti B, Wang J, Durbeej B. Excited-State Aromaticity Improves Molecular Motors: A Computational Analysis. Org Lett 2017; 19:4818-4821. [DOI: 10.1021/acs.orglett.7b02257] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Baswanth Oruganti
- Division of Theoretical Chemistry,
IFM, Linköping University, SE-581 83 Linköping, Sweden
| | - Jun Wang
- Division of Theoretical Chemistry,
IFM, Linköping University, SE-581 83 Linköping, Sweden
| | - Bo Durbeej
- Division of Theoretical Chemistry,
IFM, Linköping University, SE-581 83 Linköping, Sweden
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63
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Wang L, Huan G, Momen R, Azizi A, Xu T, Kirk SR, Filatov M, Jenkins S. QTAIM and Stress Tensor Characterization of Intramolecular Interactions Along Dynamics Trajectories of a Light-Driven Rotary Molecular Motor. J Phys Chem A 2017; 121:4778-4792. [PMID: 28586210 DOI: 10.1021/acs.jpca.7b02347] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A quantum theory of atoms in molecules (QTAIM) and stress tensor analysis was applied to analyze intramolecular interactions influencing the photoisomerization dynamics of a light-driven rotary molecular motor. For selected nonadiabatic molecular dynamics trajectories characterized by markedly different S1 state lifetimes, the electron densities were obtained using the ensemble density functional theory method. The analysis revealed that torsional motion of the molecular motor blades from the Franck-Condon point to the S1 energy minimum and the S1/S0 conical intersection is controlled by two factors: greater numbers of intramolecular bonds before the hop-time and unusually strongly coupled bonds between the atoms of the rotor and the stator blades. This results in the effective stalling of the progress along the torsional path for an extended period of time. This finding suggests a possibility of chemical tuning of the speed of photoisomerization of molecular motors and related molecular switches by reshaping their molecular backbones to decrease or increase the degree of coupling and numbers of intramolecular bond critical points as revealed by the QTAIM/stress tensor analysis of the electron density. Additionally, the stress tensor scalar and vector analysis was found to provide new methods to follow the trajectories, and from this, new insight was gained into the behavior of the S1 state in the vicinity of the conical intersection.
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Affiliation(s)
- Lingling Wang
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Guo Huan
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Roya Momen
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Alireza Azizi
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Tianlv Xu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Steven R Kirk
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Michael Filatov
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
| | - Samantha Jenkins
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research and Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University , Changsha, Hunan 410081, China
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64
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Hall CR, Conyard J, Heisler IA, Jones G, Frost J, Browne WR, Feringa BL, Meech SR. Ultrafast Dynamics in Light-Driven Molecular Rotary Motors Probed by Femtosecond Stimulated Raman Spectroscopy. J Am Chem Soc 2017; 139:7408-7414. [PMID: 28486804 DOI: 10.1021/jacs.7b03599] [Citation(s) in RCA: 64] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Photochemical isomerization in sterically crowded chiral alkenes is the driving force for molecular rotary motors in nanoscale machines. Here the excited-state dynamics and structural evolution of the prototypical light-driven rotary motor are followed on the ultrafast time scale by femtosecond stimulated Raman spectroscopy (FSRS) and transient absorption (TA). TA reveals a sub-100-fs blue shift and decay of the Franck-Condon bright state arising from relaxation along the reactive potential energy surface. The decay is accompanied by coherently excited vibrational dynamics which survive the excited-state structural evolution. The ultrafast Franck-Condon bright state relaxes to a dark excited state, which FSRS reveals to have a rich spectrum compared to the electronic ground state, with the most intense Raman-active modes shifted to significantly lower wavenumber. This is discussed in terms of a reduced bond order of the central bridging bond and overall weakening of bonds in the dark state, which is supported by electronic structure calculations. The observed evolution in the FSRS spectrum is assigned to vibrational cooling accompanied by partitioning of the dark state between the product isomer and the original ground state. Formation of the product isomer is observed in real time by FSRS. It is formed vibrationally hot and cools over several picoseconds, completing the characterization of the light-driven half of the photocycle.
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Affiliation(s)
- Christopher R Hall
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Jamie Conyard
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Ismael A Heisler
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Garth Jones
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - James Frost
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Wesley R Browne
- Molecular Inorganic Chemistry, Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Ben L Feringa
- Synthetic Organic Chemistry, Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Stephen R Meech
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, U.K
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65
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Su Q, Li Y, Wang B, Liu M, Wang H, Wang W, Liu F. Combining the Advantages of Alkene and Azo E-Z Photoisomerizations: Mechanistic Insights into Ketoimine Photoswitches. J Phys Chem A 2017; 121:2588-2596. [PMID: 28301930 DOI: 10.1021/acs.jpca.7b01674] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
We carried out CASPT2//(TD)DFT and CASPT2//CASSCF studies on the working mechanism of imine switches, including a camphorquinone-derived ketoimine (shortened as k-Imine) switch designed by Lehn as well as a model camphorquinone alkene-imine (a-Imine) proposed in this study. Under the experimental conditions (light irradiation with 455 and 365 nm for E and Z, respectively), k-Imine is excited to the S1:(nN,π*) state and then decays toward a perpendicular intermediate following the C═N bond rotation coordinate. During the bond rotation, a mild energy barrier caused by the strong interaction of S1:(nN,π*) and S2:(nO,π*) states will more or less slow down the rotation speed of k-Imine. The large difference in irradiation light wavelength supports k-Imine as a two-way photoswitch. The photoisomerization of a-Imine obeys a similar but fully barrierless pattern while requiring a higher excitation energy to reach the (nN,π*) state. The good directionality of thermal isomerization toward E(a-Imine), plus the barrierless photoisomerization, allows for the design of a thermal and photo-operated switch. For both imines, a minimal-energy crossing point (MECI) located at the perpendicular region, with low relative energy and close to the rotary path, ensures the directionality of C═N bond rotation and confirms imines as optimal candidates for photoswitches and motors.
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Affiliation(s)
- Qingqing Su
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
| | - Yuanying Li
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
| | - Bin Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
| | - Minjuan Liu
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
| | - Hongjuan Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
| | - Wenliang Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
| | - Fengyi Liu
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University , Xi'an, Shaanxi 710062, People's Republic of China
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66
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Gao YJ, Chang XP, Liu XY, Li QS, Cui G, Thiel W. Excited-State Decay Paths in Tetraphenylethene Derivatives. J Phys Chem A 2017; 121:2572-2579. [PMID: 28318255 PMCID: PMC5385518 DOI: 10.1021/acs.jpca.7b00197] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The photophysical properties of tetraphenylethene (TPE) compounds may differ widely depending on the substitution pattern, for example, with regard to the fluorescence quantum yield ϕf and the propensity to exhibit aggregation-induced emission (AIE). We report combined electronic structure calculations and nonadiabatic dynamics simulations to study the excited-state decay mechanisms of two TPE derivatives with four methyl substituents, either in the meta position (TPE-4mM, ϕf = 0.1%) or in the ortho position (TPE-4oM, ϕf = 64.3%). In both cases, two excited-state decay pathways may be relevant, namely, photoisomerization around the central ethylenic double bond and photocyclization involving two adjacent phenyl rings. In TPE-4mM, the barrierless S1 cyclization is favored; it is responsible for the ultralow fluorescence quantum yield observed experimentally. In TPE-4oM, both the S1 photocyclization and photoisomerization paths are blocked by non-negligible barriers, and fluorescence is thus feasible. Nonadiabatic dynamics simulations with more than 1000 surface hopping trajectories show ultrafast cyclization upon photoexcitation of TPE-4mM, whereas TPE-4oM remains unreactive during the 1 ps simulations. We discuss the chances for spectroscopic detection of the postulated cyclic photoproduct of TPE-4mM and the relevance of our findings for the AIE process.
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Affiliation(s)
- Yuan-Jun Gao
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University Beijing 100875, China
| | - Xue-Ping Chang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University Beijing 100875, China
| | - Xiang-Yang Liu
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University Beijing 100875, China
| | - Quan-Song Li
- School of Chemistry and Chemical Engineering, Beijing Institute of Technology , Beijing 100081, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University Beijing 100875, China
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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67
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Conyard J, Stacko P, Chen J, McDonagh S, Hall CR, Laptenok SP, Browne WR, Feringa BL, Meech SR. Ultrafast Excited State Dynamics in Molecular Motors: Coupling of Motor Length to Medium Viscosity. J Phys Chem A 2017; 121:2138-2150. [DOI: 10.1021/acs.jpca.7b00087] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Jamie Conyard
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Peter Stacko
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Jiawen Chen
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Sophie McDonagh
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Christopher R. Hall
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Sergey P. Laptenok
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
| | - Wesley R. Browne
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Ben L. Feringa
- Stratingh
Institute for Chemistry, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Stephen R. Meech
- School
of Chemistry, University of East Anglia, Norwich Research Park, Norwich NR4 7TJ, U.K
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68
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Pang X, Cui X, Hu D, Jiang C, Zhao D, Lan Z, Li F. “Watching” the Dark State in Ultrafast Nonadiabatic Photoisomerization Process of a Light-Driven Molecular Rotary Motor. J Phys Chem A 2017; 121:1240-1249. [DOI: 10.1021/acs.jpca.6b12253] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Xiaojuan Pang
- Key
Laboratory for Quantum Information and Quantum Optoelectronic Devices,
Shaanxi, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China
| | - Xueyan Cui
- Key
Laboratory for Quantum Information and Quantum Optoelectronic Devices,
Shaanxi, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China
| | - Deping Hu
- Qingdao Institute
of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, 189 Songling Road, Qingdao, 266101 Shandong China
| | - Chenwei Jiang
- Key
Laboratory for Quantum Information and Quantum Optoelectronic Devices,
Shaanxi, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China
| | - Di Zhao
- Key
Laboratory for Quantum Information and Quantum Optoelectronic Devices,
Shaanxi, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China
| | - Zhenggang Lan
- Qingdao Institute
of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, 189 Songling Road, Qingdao, 266101 Shandong China
| | - Fuli Li
- Key
Laboratory for Quantum Information and Quantum Optoelectronic Devices,
Shaanxi, and Department of Applied Physics, Xi’an Jiaotong University, Xi’an 710049, China
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69
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Wang YT, Gao YJ, Wang Q, Cui G. Photochromic Mechanism of a Bridged Diarylethene: Combined Electronic Structure Calculations and Nonadiabatic Dynamics Simulations. J Phys Chem A 2017; 121:793-802. [PMID: 28051866 DOI: 10.1021/acs.jpca.6b11682] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Intramolecularly bridged diarylethenes exhibit improved photocyclization quantum yields because the anti-syn isomerization that originally suppresses photocyclization in classical diarylethenes is blocked. Experimentally, three possible channels have been proposed to interpret experimental observation, but many details of photochromic mechanism remain ambiguous. In this work we have employed a series of electronic structure methods (OM2/MRCI, DFT, TDDFT, RI-CC2, DFT/MRCI, and CASPT2) to comprehensively study excited state properties, photocyclization, and photoreversion dynamics of 1,2-dicyano[2,2]metacyclophan-1-ene. On the basis of optimized stationary points and minimum-energy conical intersections, we have refined experimentally proposed photochromic mechanism. Only an S1/S0 minimum-energy conical intersection is located; thus, we can exclude the third channel experimentally proposed. In addition, we find that both photocyclization and photoreversion processes use the same S1/S0 conical intersection to decay the S1 system to the S0 state, so we can unify the remaining two channels into one. These new insights are verified by our OM2/MRCI nonadiabatic dynamics simulations. The S1 excited-state lifetimes of photocyclization and photoreversion are estimated to be 349 and 453 fs, respectively, which are close to experimentally measured values: 240 ± 60 and 250 fs in acetonitrile solution. The present study not only interprets experimental observations and refines previously proposed mechanism but also provides new physical insights that are valuable for future experiments.
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Affiliation(s)
- Ya-Ting Wang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| | - Yuan-Jun Gao
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| | - Qian Wang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China
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70
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Wang J, Oruganti B, Durbeej B. Light-driven rotary molecular motors without point chirality: a minimal design. Phys Chem Chem Phys 2017; 19:6952-6956. [DOI: 10.1039/c6cp08484b] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Despite lacking a stereocenter, light-driven cyclohexenylidene-pyrrolinium molecular motors achieve unidirectional rotary motion through the asymmetry afforded by the puckered cyclohexenylidene.
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Affiliation(s)
- Jun Wang
- Division of Theoretical Chemistry
- IFM
- Linköping University
- SE-581 83 Linköping
- Sweden
| | - Baswanth Oruganti
- Division of Theoretical Chemistry
- IFM
- Linköping University
- SE-581 83 Linköping
- Sweden
| | - Bo Durbeej
- Division of Theoretical Chemistry
- IFM
- Linköping University
- SE-581 83 Linköping
- Sweden
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71
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Li Y, Liu F, Wang B, Su Q, Wang W, Morokuma K. Different conical intersections control nonadiabatic photochemistry of fluorene light-driven molecular rotary motor: A CASSCF and spin-flip DFT study. J Chem Phys 2016; 145:244311. [DOI: 10.1063/1.4972825] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Yuanying Li
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an, Shaanxi 710062, People’s Republic of China
| | - Fengyi Liu
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an, Shaanxi 710062, People’s Republic of China
| | - Bin Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an, Shaanxi 710062, People’s Republic of China
| | - Qingqing Su
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an, Shaanxi 710062, People’s Republic of China
| | - Wenliang Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an, Shaanxi 710062, People’s Republic of China
| | - Keiji Morokuma
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
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72
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Lin Y, Akimov AV. Dependence of Nonadiabatic Couplings with Kohn–Sham Orbitals on the Choice of Density Functional: Pure vs Hybrid. J Phys Chem A 2016; 120:9028-9041. [DOI: 10.1021/acs.jpca.6b09660] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Yuhan Lin
- Department
of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, United States
| | - Alexey V. Akimov
- Department
of Chemistry, University at Buffalo, The State University of New York, Buffalo, New York 14260-3000, United States
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73
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Hu MX, Xu T, Momen R, Huan G, Kirk SR, Jenkins S, Filatov M. A QTAIM and stress tensor investigation of the torsion path of a light-driven fluorene molecular rotary motor. J Comput Chem 2016; 37:2588-96. [PMID: 27671359 DOI: 10.1002/jcc.24487] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Revised: 08/21/2016] [Accepted: 08/23/2016] [Indexed: 11/10/2022]
Abstract
The utility of the QTAIM/stress tensor analysis method for characterizing the photoisomerization of light driven molecular rotary machines is investigated on the example of the torsion path in fluorene molecular motor. The scalar and vector descriptors of QTAIM/stress tensor reveal additional information on the bonding interactions between the rotating units of the motor, which cannot be obtained from the analysis of the ground and excited state potential energy surfaces. The topological features of the fluorene motor molecular graph display that, upon the photoexcitation a certain increase in the torsional stiffness of the rotating bond can be attributed to the increasing topological stability of the rotor carbon atom attached to the rotation axle. The established variations in the torsional stiffness of the rotating bond may cause transfer of certain fraction of the torsional energy to other internal degrees of freedom, such as the pyramidalization distortion. © 2016 Wiley Periodicals, Inc.
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Affiliation(s)
- Ming Xing Hu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Tianlv Xu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Roya Momen
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Guo Huan
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Steven R Kirk
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Samantha Jenkins
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Michael Filatov
- Center for Superfunctional Materials, Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulsan, 44919, Korea
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74
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Amirjalayer S, Cnossen A, Browne WR, Feringa BL, Buma WJ, Woutersen S. Direct Observation of a Dark State in the Photocycle of a Light-Driven Molecular Motor. J Phys Chem A 2016; 120:8606-8612. [PMID: 27684513 PMCID: PMC5098230 DOI: 10.1021/acs.jpca.6b09644] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
![]()
Controlling the excited-state properties
of light driven molecular
machines is crucial to achieving high efficiency and directed functionality.
A key challenge in achieving control lies in unravelling the complex
photodynamics and especially in identifying the role played by dark
states. Here we use the structure sensitivity and high time resolution
of UV-pump/IR-probe spectroscopy to build a detailed and comprehensive
model of the structural evolution of light driven molecular rotors.
The photodynamics of these chiral overcrowded alkene derivatives are
determined by two close-lying excited electronic states. The potential
energy landscape of these “bright” and “dark”
states gives rise to a broad excited-state electronic absorption band
over the entire mid-IR range that is probed for the first time and
modeled by quantum mechanical calculations. The transient IR vibrational
fingerprints observed in our studies allow for an unambiguous identification
of the identity of the “dark” electronic excited state
from which the photon’s energy is converted into motion, and
thereby pave the way for tuning the quantum yield of future molecular
rotors based on this structural motif.
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Affiliation(s)
- Saeed Amirjalayer
- Physikalisches Institut, Westfälische Wilhelms-Universität Münster , Wilhelm-Klemm-Strasse 10, 48149 Münster, Germany.,Center for Nanotechnology , Heisenbergstrasse 11, 48149 Münster, Germany.,Molecular Photonics Group, Van 't Hoff Institute for Molecular Science, University of Amsterdam , Science Park 904, 1098XH Amsterdam, The Netherlands
| | - Arjen Cnossen
- Stratingh Institute for Chemistry and Zernike Institute for Advanced Materials, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Wesley R Browne
- Stratingh Institute for Chemistry and Zernike Institute for Advanced Materials, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry and Zernike Institute for Advanced Materials, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Wybren J Buma
- Molecular Photonics Group, Van 't Hoff Institute for Molecular Science, University of Amsterdam , Science Park 904, 1098XH Amsterdam, The Netherlands
| | - Sander Woutersen
- Molecular Photonics Group, Van 't Hoff Institute for Molecular Science, University of Amsterdam , Science Park 904, 1098XH Amsterdam, The Netherlands
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75
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Amatatsu Y. Computational Design of a Fluorene-Based Ethylenoid Bridged by Trimethylene Chain. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2016. [DOI: 10.1246/bcsj.20160161] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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76
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Nebgen B, Prezhdo OV. Fragment Molecular Orbital Nonadiabatic Molecular Dynamics for Condensed Phase Systems. J Phys Chem A 2016; 120:7205-12. [DOI: 10.1021/acs.jpca.6b05607] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ben Nebgen
- Department
of Chemistry, University of Southern California, Los Angeles, California 90037, United States
| | - Oleg V. Prezhdo
- Department
of Chemistry, University of Southern California, Los Angeles, California 90037, United States
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77
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Oruganti B, Durbeej B. On the possibility to accelerate the thermal isomerizations of overcrowded alkene-based rotary molecular motors with electron-donating or electron-withdrawing substituents. J Mol Model 2016; 22:219. [PMID: 27553304 PMCID: PMC4995225 DOI: 10.1007/s00894-016-3085-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2016] [Accepted: 08/05/2016] [Indexed: 12/01/2022]
Abstract
We employ computational methods to investigate the possibility of using electron-donating or electron-withdrawing substituents to reduce the free-energy barriers of the thermal isomerizations that limit the rotational frequencies achievable by synthetic overcrowded alkene-based molecular motors. Choosing as reference systems one of the fastest motors known to date and two variants thereof, we consider six new motors obtained by introducing electron-donating methoxy and dimethylamino or electron-withdrawing nitro and cyano substituents in conjugation with the central olefinic bond connecting the two (stator and rotator) motor halves. Performing density functional theory calculations, we then show that electron-donating (but not electron-withdrawing) groups at the stator are able to reduce the already small barriers of the reference motors by up to 18 kJ mol(-1). This result outlines a possible strategy for improving the rotational frequencies of motors of this kind. Furthermore, exploring the origin of the catalytic effect, it is found that electron-donating groups exert a favorable steric influence on the thermal isomerizations, which is not manifested by electron-withdrawing groups. This finding suggests a new mechanism for controlling the critical steric interactions of these motors. Graphical Abstract The introduction of electron-donating groups in one of the fastest rotary molecular motors known to date is found to reduce the free-energy barriers of the thermal steps that limit the rotational frequencies by up to 18 kJ mol(-1).
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Affiliation(s)
- Baswanth Oruganti
- Division of Theoretical Chemistry, IFM, Linköping University, SE-581 83, Linköping, Sweden
| | - Bo Durbeej
- Division of Theoretical Chemistry, IFM, Linköping University, SE-581 83, Linköping, Sweden.
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78
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Oruganti B, Wang J, Durbeej B. Computational Insight to Improve the Thermal Isomerisation Performance of Overcrowded Alkene-Based Molecular Motors through Structural Redesign. Chemphyschem 2016; 17:3399-3408. [DOI: 10.1002/cphc.201600766] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Revised: 08/18/2016] [Indexed: 11/06/2022]
Affiliation(s)
- Baswanth Oruganti
- Division of Theoretical Chemistry, IFM; Linköping University; 581 83 Linköping Sweden
| | - Jun Wang
- Division of Theoretical Chemistry, IFM; Linköping University; 581 83 Linköping Sweden
| | - Bo Durbeej
- Division of Theoretical Chemistry, IFM; Linköping University; 581 83 Linköping Sweden
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79
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Tuna D, Lu Y, Koslowski A, Thiel W. Semiempirical Quantum-Chemical Orthogonalization-Corrected Methods: Benchmarks of Electronically Excited States. J Chem Theory Comput 2016; 12:4400-22. [DOI: 10.1021/acs.jctc.6b00403] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Deniz Tuna
- Max-Planck-Institut für Kohlenforschung, 45470 Mülheim an der Ruhr, Germany
| | - You Lu
- Max-Planck-Institut für Kohlenforschung, 45470 Mülheim an der Ruhr, Germany
| | - Axel Koslowski
- Max-Planck-Institut für Kohlenforschung, 45470 Mülheim an der Ruhr, Germany
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung, 45470 Mülheim an der Ruhr, Germany
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80
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Sifain AE, Wang L, Prezhdo OV. Communication: Proper treatment of classically forbidden electronic transitions significantly improves detailed balance in surface hopping. J Chem Phys 2016; 144:211102. [DOI: 10.1063/1.4953444] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Affiliation(s)
- Andrew E. Sifain
- Department of Physics and Astronomy, University of Southern California, Los Angeles, California 90089-0485, USA
| | - Linjun Wang
- Department of Chemistry, Zhejiang University, Hangzhou 310027, China
| | - Oleg V. Prezhdo
- Department of Physics and Astronomy, University of Southern California, Los Angeles, California 90089-0485, USA
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-1062, USA
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81
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Oruganti B, Fang C, Durbeej B. Computational design of faster rotating second-generation light-driven molecular motors by control of steric effects. Phys Chem Chem Phys 2016; 17:21740-51. [PMID: 26234787 DOI: 10.1039/c5cp02303c] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
We report a systematic computational investigation of the possibility to accelerate the rate-limiting thermal isomerizations of the rotary cycles of synthetic light-driven overcrowded alkene-based molecular motors through modulation of steric interactions. Choosing as a reference system a second-generation motor known to accomplish rotary motion in the MHz regime and using density functional theory methods, we propose a three-step mechanism for the thermal isomerizations of this motor and show that variation of the steric bulkiness of the substituent at the stereocenter can reduce the (already small) free-energy barrier of the rate-determining step by a further 15-17 kJ mol(-1). This finding holds promise for future motors of this kind to reach beyond the MHz regime. Furthermore, we demonstrate and explain why one particular step is kinetically favored by decreasing and another step is kinetically favored by increasing the steric bulkiness of this substituent, and identify a possible back reaction capable of impeding the rotary rate.
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Affiliation(s)
- Baswanth Oruganti
- Division of Theoretical Chemistry, IFM, Linköping University, SE-581 83 Linköping, Sweden.
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82
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Dral PO, Wu X, Spörkel L, Koslowski A, Weber W, Steiger R, Scholten M, Thiel W. Semiempirical Quantum-Chemical Orthogonalization-Corrected Methods: Theory, Implementation, and Parameters. J Chem Theory Comput 2016; 12:1082-96. [PMID: 26771204 PMCID: PMC4785507 DOI: 10.1021/acs.jctc.5b01046] [Citation(s) in RCA: 103] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Semiempirical orthogonalization-corrected
methods (OM1, OM2, and
OM3) go beyond the standard MNDO model by explicitly including additional
interactions into the Fock matrix in an approximate manner (Pauli
repulsion, penetration effects, and core–valence interactions),
which yields systematic improvements both for ground-state and excited-state
properties. In this Article, we describe the underlying theoretical
formalism of the OMx methods and their implementation
in full detail, and we report all relevant OMx parameters
for hydrogen, carbon, nitrogen, oxygen, and fluorine. For a standard
set of mostly organic molecules commonly used in semiempirical method
development, the OMx results are found to be superior
to those from standard MNDO-type methods. Parametrized Grimme-type
dispersion corrections can be added to OM2 and OM3 energies to provide
a realistic treatment of noncovalent interaction energies, as demonstrated
for the complexes in the S22 and S66×8 test sets.
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Affiliation(s)
- Pavlo O Dral
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Xin Wu
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Lasse Spörkel
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Axel Koslowski
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Wolfgang Weber
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Rainer Steiger
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Mirjam Scholten
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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83
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Xia SH, Xie BB, Fang Q, Cui G, Thiel W. Excited-state intramolecular proton transfer to carbon atoms: nonadiabatic surface-hopping dynamics simulations. Phys Chem Chem Phys 2016; 17:9687-97. [PMID: 25711992 DOI: 10.1039/c5cp00101c] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Excited-state intramolecular proton transfer (ESIPT) between two highly electronegative atoms, for example, oxygen and nitrogen, has been intensely studied experimentally and computationally, whereas there has been much less theoretical work on ESIPT to other atoms such as carbon. We have employed CASSCF, MS-CASPT2, RI-ADC(2), OM2/MRCI, DFT, and TDDFT methods to study the mechanistic photochemistry of 2-phenylphenol, for which such an ESIPT has been observed experimentally. According to static electronic structure calculations, irradiation of 2-phenylphenol populates the bright S1 state, which has a rather flat potential in the Franck-Condon region (with a shallow enol minimum at the CASSCF level) and may undergo an essentially barrierless ESIPT to the more stable S1 keto species. There are two S1/S0 conical intersections that mediate relaxation to the ground state, one in the enol region and one in the keto region, with the latter one substantially lower in energy. After S1 → S0 internal conversion, the transient keto species can return back to the S0 enol structure via reverse ground-state hydrogen transfer in a facile tautomerization. This mechanistic scenario is verified by OM2/MRCI-based fewest-switches surface-hopping simulations that provide detailed dynamic information. In these trajectories, ESIPT is complete within 118 fs; the corresponding S1 excited-state lifetime is computed to be 373 fs in vacuum. Most of the trajectories decay to the ground state via the S1/S0 conical intersection in the keto region (67%), and the remaining ones via the enol region (33%). The combination of static electronic structure computations and nonadiabatic dynamics simulations is expected to be generally useful for understanding the mechanistic photophysics and photochemistry of molecules with intramolecular hydrogen bonds.
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Affiliation(s)
- Shu-Hua Xia
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University, Beijing 100875, China.
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84
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Liu XY, Chang XP, Xia SH, Cui G, Thiel W. Excited-State Proton-Transfer-Induced Trapping Enhances the Fluorescence Emission of a Locked GFP Chromophore. J Chem Theory Comput 2016; 12:753-64. [PMID: 26744782 PMCID: PMC4750082 DOI: 10.1021/acs.jctc.5b00894] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
![]()
The chemical locking of the central
single bond in core chromophores
of green fluorescent proteins (GFPs) influences their excited-state
behavior in a distinct manner. Experimentally, it significantly enhances
the fluorescence quantum yield of GFP chromophores with an ortho-hydroxyl
group, while it has almost no effect on the photophysics of GFP chromophores
with a para-hydroxyl group. To unravel the underlying physical reasons
for this different behavior, we report static electronic structure
calculations and nonadiabatic dynamics simulations on excited-state
intramolecular proton transfer, cis–trans isomerization, and
excited-state deactivation in a locked ortho-substituted GFP model
chromophore (o-LHBI). On the basis of our previous and present results,
we find that the S1 keto species is responsible for the
fluorescence emission of the unlocked o-HBI and the locked o-LHBI
species. Chemical locking does not change the parts of the S1 and S0 potential energy surfaces relevant to enol–keto
tautomerization; hence, in both chromophores, there is an ultrafast
excited-state intramolecular proton transfer that takes only 35 fs
on average. However, the locking effectively hinders the S1 keto species from approaching the keto S1/S0 conical intersections so that most of trajectories are trapped in
the S1 keto region for the entire 2 ps simulation time.
Therefore, the fluorescence quantum yield of o-LHBI is enhanced compared
with that of unlocked o-HBI, in which the S1 excited-state
decay is efficient and ultrafast. In the case of the para-substituted
GFP model chromophores p-HBI and p-LHBI, chemical locking hardly affects
their efficient excited-state deactivation via cis–trans isomerization;
thus, the fluorescence quantum yields in these chromophores remain
very low. The insights gained from the present work may help to guide
the design of new GFP chromophores with improved fluorescence emission
and brightness.
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Affiliation(s)
- Xiang-Yang Liu
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China and
| | - Xue-Ping Chang
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China and
| | - Shu-Hua Xia
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China and
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry, Ministry of Education, College of Chemistry, Beijing Normal University , Beijing 100875, China and
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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85
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Nikiforov A, Gamez JA, Thiel W, Filatov M. Computational Design of a Family of Light-Driven Rotary Molecular Motors with Improved Quantum Efficiency. J Phys Chem Lett 2016; 7:105-10. [PMID: 26670164 PMCID: PMC4707559 DOI: 10.1021/acs.jpclett.5b02575] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Two new light-driven molecular rotary motors based on the N-alkylated indanylidene benzopyrrole frameworks are proposed and studied using quantum chemical calculations and nonadiabatic molecular dynamics simulations. These new motors perform pure axial rotation, and the photochemical steps of the rotary cycle are dominated by the fast bond-length-alternation motion that enables ultrafast access to the S1/S0 intersection. The new motors are predicted to display a quantum efficiency higher than that of the currently available synthetic all-hydrocarbon motors. Remarkably, the quantum efficiency is not governed by the topography (peaked versus sloped) of the minimum-energy conical intersection, whereas the S1 decay time depends on the topography as well as on the energy of the intersection relative to the S1 minimum. It is the axial chirality (helicity), rather than the point chirality, that controls the sense of rotation of the motor.
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Affiliation(s)
- Alexander Nikiforov
- Max-Planck-Institut
für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Jose A. Gamez
- Institute
of Technical and Macromolecular Chemistry, RWTH Aachen University, Worringerweg 1, 52074 Aachen, Germany
| | - Walter Thiel
- Max-Planck-Institut
für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Michael Filatov
- Department
of Chemistry, Southern Methodist University, 3215 Daniel Avenue, Dallas, Texas 75275-0314, United States
- Department of Chemistry, School
of Natural Sciences, Ulsan National Institute
of Science and Technology (UNIST), Ulsan 689-798, Korea
- E-mail:
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86
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Xie BB, Xia SH, Chang XP, Cui G. Photophysics of Auramine-O: electronic structure calculations and nonadiabatic dynamics simulations. Phys Chem Chem Phys 2016; 18:403-413. [DOI: 10.1039/c5cp05312a] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Sequential vs. concerted S1 relaxation pathways.
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Affiliation(s)
- Bin-Bin Xie
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
| | - Shu-Hua Xia
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
| | - Xue-Ping Chang
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
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87
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Guo WW, Liu XY, Chen WK, Cui G. Excited-state proton transfer in 4-2′-hydroxyphneylpyridine: full-dimensional surface-hopping dynamics simulations. RSC Adv 2016. [DOI: 10.1039/c6ra17827h] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
We have employed combined electronic structure calculations and “on-the-fly” fewest switches surface-hopping dynamics simulations to study the S1 excited-state intramolecular proton transfer (ESIPT) and decay dynamics of 4-(2′-hydroxyphenyl)pyridine.
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Affiliation(s)
- Wei-Wei Guo
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
| | - Xiang-Yang Liu
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
| | - Wen-Kai Chen
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
| | - Ganglong Cui
- Key Laboratory of Theoretical and Computational Photochemistry
- Ministry of Education
- College of Chemistry
- Beijing Normal University
- Beijing 100875
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88
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Zhang RQ, Zhao YL, Qi F, Hermann K, Van Hove MA. Intramolecular torque, an indicator of the internal rotation direction of rotor molecules and similar systems. Phys Chem Chem Phys 2016; 18:29665-29672. [DOI: 10.1039/c6cp05996a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Rotation-inducing torque being ubiquitous in many molecular systems is the driving force of the molecular internal rotation and an indicator of the rotation direction.
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Affiliation(s)
- Rui-Qin Zhang
- Department of Physics and Materials Science
- City University of Hong Kong
- China
| | - Yan-Ling Zhao
- Institute of Computational and Theoretical Studies & Department of Physics
- Hong Kong Baptist University
- China
| | - Fei Qi
- Institute of Computational and Theoretical Studies & Department of Physics
- Hong Kong Baptist University
- China
| | - Klaus Hermann
- Inorganic Chemistry Department
- Fritz-Haber-Institut der Max-Planck-Gesellschaft
- 14195 Berlin
- Germany
| | - Michel A. Van Hove
- Institute of Computational and Theoretical Studies & Department of Physics
- Hong Kong Baptist University
- China
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89
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Hu D, Huang J, Xie Y, Yue L, Zhuang X, Lan Z. Nonadiabatic dynamics and photoisomerization of biomimetic photoswitches. Chem Phys 2015. [DOI: 10.1016/j.chemphys.2015.10.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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90
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White AJ, Gorshkov VN, Tretiak S, Mozyrsky D. Non-adiabatic molecular dynamics by accelerated semiclassical Monte Carlo. J Chem Phys 2015; 143:014115. [DOI: 10.1063/1.4923473] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Alexander J. White
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Center for Nonlinear Studies (CNLS), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | | | - Sergei Tretiak
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Center for Nonlinear Studies (CNLS), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Center for Integrated Nanotechnologies (CINT), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - Dmitry Mozyrsky
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
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91
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Cui G, Thiel W. Generalized trajectory surface-hopping method for internal conversion and intersystem crossing. J Chem Phys 2015; 141:124101. [PMID: 25273406 DOI: 10.1063/1.4894849] [Citation(s) in RCA: 117] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
Trajectory-based fewest-switches surface-hopping (FSSH) dynamics simulations have become a popular and reliable theoretical tool to simulate nonadiabatic photophysical and photochemical processes. Most available FSSH methods model internal conversion. We present a generalized trajectory surface-hopping (GTSH) method for simulating both internal conversion and intersystem crossing processes on an equal footing. We consider hops between adiabatic eigenstates of the non-relativistic electronic Hamiltonian (pure spin states), which is appropriate for sufficiently small spin-orbit coupling. This choice allows us to make maximum use of existing electronic structure programs and to minimize the changes to available implementations of the traditional FSSH method. The GTSH method is formulated within the quantum mechanics (QM)/molecular mechanics framework, but can of course also be applied at the pure QM level. The algorithm implemented in the GTSH code is specified step by step. As an initial GTSH application, we report simulations of the nonadiabatic processes in the lowest four electronic states (S0, S1, T1, and T2) of acrolein both in vacuo and in acetonitrile solution, in which the acrolein molecule is treated at the ab initio complete-active-space self-consistent-field level. These dynamics simulations provide detailed mechanistic insight by identifying and characterizing two nonadiabatic routes to the lowest triplet state, namely, direct S1 → T1 hopping as major pathway and sequential S1 → T2 → T1 hopping as minor pathway, with the T2 state acting as a relay state. They illustrate the potential of the GTSH approach to explore photoinduced processes in complex systems, in which intersystem crossing plays an important role.
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Affiliation(s)
- Ganglong Cui
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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92
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Nikiforov A, Gamez JA, Thiel W, Huix-Rotllant M, Filatov M. Assessment of approximate computational methods for conical intersections and branching plane vectors in organic molecules. J Chem Phys 2015; 141:124122. [PMID: 25273427 DOI: 10.1063/1.4896372] [Citation(s) in RCA: 59] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Quantum-chemical computational methods are benchmarked for their ability to describe conical intersections in a series of organic molecules and models of biological chromophores. Reference results for the geometries, relative energies, and branching planes of conical intersections are obtained using ab initio multireference configuration interaction with single and double excitations (MRCISD). They are compared with the results from more approximate methods, namely, the state-interaction state-averaged restricted ensemble-referenced Kohn-Sham method, spin-flip time-dependent density functional theory, and a semiempirical MRCISD approach using an orthogonalization-corrected model. It is demonstrated that these approximate methods reproduce the ab initio reference data very well, with root-mean-square deviations in the optimized geometries of the order of 0.1 Å or less and with reasonable agreement in the computed relative energies. A detailed analysis of the branching plane vectors shows that all currently applied methods yield similar nuclear displacements for escaping the strong non-adiabatic coupling region near the conical intersections. Our comparisons support the use of the tested quantum-chemical methods for modeling the photochemistry of large organic and biological systems.
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Affiliation(s)
- Alexander Nikiforov
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Jose A Gamez
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Miquel Huix-Rotllant
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7, D-60438 Frankfurt am Main, Germany
| | - Michael Filatov
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Beringstr. 4, D-53115 Bonn, Germany
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93
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Xie BB, Xia SH, Liu LH, Cui G. Surface-Hopping Dynamics Simulations of Malachite Green: A Triphenylmethane Dye. J Phys Chem A 2015; 119:5607-17. [DOI: 10.1021/acs.jpca.5b02549] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Bin-Bin Xie
- Key Laboratory of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Shu-Hua Xia
- Key Laboratory of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Li-Hong Liu
- Key Laboratory of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
| | - Ganglong Cui
- Key Laboratory of Theoretical
and Computational Photochemistry, Ministry of Education, College of
Chemistry, Beijing Normal University, Beijing 100875, China
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94
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Filatov M. Ensemble DFT Approach to Excited States of Strongly Correlated Molecular Systems. Top Curr Chem (Cham) 2015; 368:97-124. [PMID: 25906417 DOI: 10.1007/128_2015_630] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Ensemble density functional theory (DFT) is a novel time-independent formalism for obtaining excitation energies of many-body fermionic systems. A considerable advantage of ensemble DFT over the more common Kohn-Sham (KS) DFT and time-dependent DFT formalisms is that it enables one to account for strong non-dynamic electron correlation in the ground and excited states of molecular systems in a transparent and accurate fashion. Despite its positive aspects, ensemble DFT has not so far found its way into the repertoire of methods of modern computational chemistry, probably because of the perceived lack of practically affordable implementations of the theory. The spin-restricted ensemble-referenced KS (REKS) method is perhaps the first computationally feasible implementation of the ideas behind ensemble DFT which enables one to describe accurately electronic transitions in a wide class of molecular systems, including strongly correlated molecules (biradicals, molecules undergoing bond breaking/formation), extended π-conjugated systems, donor-acceptor charge transfer adducts, etc.
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Affiliation(s)
- Michael Filatov
- Institut für Physikalische und Theoretische Chemie, Universität Bonn, Beringstr. 4, 53115, Bonn, Germany,
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95
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Filatov M. Spin-restricted ensemble-referenced Kohn-Sham method: basic principles and application to strongly correlated ground and excited states of molecules. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2014. [DOI: 10.1002/wcms.1209] [Citation(s) in RCA: 92] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Michael Filatov
- Institut für Physikalische und Theoretische Chemie; Universität Bonn; Bonn Germany
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96
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White AJ, Gorshkov VN, Wang R, Tretiak S, Mozyrsky D. Semiclassical Monte Carlo: A first principles approach to non-adiabatic molecular dynamics. J Chem Phys 2014; 141:184101. [DOI: 10.1063/1.4900988] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Affiliation(s)
- Alexander J. White
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Center for Nonlinear Studies (CNLS), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - Vyacheslav N. Gorshkov
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- National Technical University of Ukraine, Kiev 03056, Ukraine
| | - Ruixi Wang
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, USA
| | - Sergei Tretiak
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Center for Nonlinear Studies (CNLS), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
- Center for Integrated Nanotechnologies (CINT), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - Dmitry Mozyrsky
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
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97
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Spörkel L, Jankowska J, Thiel W. Photoswitching of salicylidene methylamine: a theoretical photodynamics study. J Phys Chem B 2014; 119:2702-10. [PMID: 25341075 PMCID: PMC4479613 DOI: 10.1021/jp5095678] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Photoswitching
of simple photochromic molecules attracts substantial
attention because of its possible role in future photon-driven molecular
electronics. Here we model the full photoswitching cycle of a minimal
photochromic Schiff base–salicylidene methylamine (SMA). We
perform semiempirical nonadiabatic on-the-fly photodynamics simulations
at the OM2/MRCI level and thoroughly analyze the structural time evolution
and switching efficiency of the system. We also identify and examine
in detail the crucial steps in the SMA photochemistry ruled by excited-state
intramolecular proton transfer. The results place the investigated
model aromatic Schiff base among the promising candidates for novel
photoswitching molecular materials. Our study also shows the potential
of the semiempirical multireference photodynamics simulations as a
tool for early stage molecular photodevice design.
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Affiliation(s)
- Lasse Spörkel
- Max-Planck-Institut für Kohlenforschung , Kaiser-Wilhelm-Platz 1, 45470 Mülheim an der Ruhr, Germany
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98
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Wang L, Che X, Li H, Gao J, Liu C. Theoretical study on the working mechanism of a reversible light-driven rotary molecular motor. Theor Chem Acc 2014. [DOI: 10.1007/s00214-014-1566-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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99
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Blancafort L. Photochemistry and photophysics at extended seams of conical intersection. Chemphyschem 2014; 15:3166-81. [PMID: 25157686 DOI: 10.1002/cphc.201402359] [Citation(s) in RCA: 65] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2014] [Indexed: 11/07/2022]
Abstract
The role of extended seams of conical intersection in excited-state mechanisms is reviewed. Seams are crossings of the potential energy surface in many dimensions where the decay from the excited to the ground state can occur, and the extended seam is composed of different segments lying along a reaction coordinate. Every segment is associated with a different primary photoproduct, which gives rise to competing pathways. This idea is first illustrated for fulvene and ethylene, and then it is used to explain more complex cases such as the dependence of the isomerisation of retinal chromophore isomers on the protein environment, the dependence of the efficiency of the azobenzene photochemical switch on the wavelength of irradiation and the direction of the isomerisation, and the coexistence of different mechanisms in the photo-induced Wolff rearrangement of diazonaphthoquinone. The role of extended seams in the photophysics of the DNA nucleobases and the relationship between two-state seams and three-state crossings is also discussed. As an outlook, the design of optical control strategies based on the passage of the excited molecule through the seam is considered, and it is shown how the excited-state lifetime of fulvene can be modulated by shaping the energy of the seam.
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Affiliation(s)
- Lluís Blancafort
- Institut de Química Computacional i Catàlisi and Departament de Química, Universitat de Girona, Campus de Montilivi, 17071 Girona (Spain).
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100
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Conyard J, Cnossen A, Browne WR, Feringa BL, Meech SR. Chemically optimizing operational efficiency of molecular rotary motors. J Am Chem Soc 2014; 136:9692-700. [PMID: 24918780 DOI: 10.1021/ja5041368] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Unidirectional molecular rotary motors that harness photoinduced cis-trans (E-Z) isomerization are promising tools for the conversion of light energy to mechanical motion in nanoscale molecular machines. Considerable progress has been made in optimizing the frequency of ground-state rotation, but less attention has been focused on excited-state processes. Here the excited-state dynamics of a molecular motor with electron donor and acceptor substituents located to modify the excited-state reaction coordinate, without altering its stereochemistry, are studied. The substituents are shown to modify the photochemical yield of the isomerization without altering the motor frequency. By combining 50 fs resolution time-resolved fluorescence with ultrafast transient absorption spectroscopy the underlying excited-state dynamics are characterized. The Franck-Condon excited state relaxes in a few hundred femtoseconds to populate a lower energy dark state by a pathway that utilizes a volume conserving structural change. This is assigned to pyramidalization at a carbon atom of the isomerizing bridging double bond. The structure and energy of the dark state thus reached are a function of the substituent, with electron-withdrawing groups yielding a lower energy longer lived dark state. The dark state is coupled to the Franck-Condon state and decays on a picosecond time scale via a coordinate that is sensitive to solvent friction, such as rotation about the bridging bond. Neither subpicosecond nor picosecond dynamics are sensitive to solvent polarity, suggesting that intramolecular charge transfer and solvation are not key driving forces for the rate of the reaction. Instead steric factors and medium friction determine the reaction pathway, with the sterically remote substitution primarily influencing the energetics. Thus, these data indicate a chemical method of optimizing the efficiency of operation of these molecular motors without modifying their overall rotational frequency.
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Affiliation(s)
- Jamie Conyard
- School of Chemistry, University of East Anglia , Norwich Research Park, Norwich NR4 7TJ, United Kingdom
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