51
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Taguchi J, Takeuchi T, Takahashi R, Masero F, Ito H. Concise Synthesis of Potassium Acyltrifluoroborates from Aldehydes through Copper(I)‐Catalyzed Borylation/Oxidation. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201901748] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Jumpei Taguchi
- Division of Applied ChemistryGraduate School of Engineering Hokkaido University Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Takumi Takeuchi
- Division of Applied ChemistryGraduate School of Engineering Hokkaido University Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Rina Takahashi
- Division of Applied ChemistryGraduate School of Engineering Hokkaido University Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Fabio Masero
- Laboratorium für Organische ChemieDepartment of Chemistry and Applied BioscienceETH Zürich 8093 Zürich Switzerland
| | - Hajime Ito
- Division of Applied ChemistryGraduate School of Engineering Hokkaido University Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
- Institute for Chemical Reaction Design and Discovery (WPI-ICReDD)Hokkaido University Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
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52
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Iramain MA, Davies L, Brandán SA. Structural and spectroscopic differences among the potassium 5-hydroxypentanoyltrifluoroborate salt and the furoyl and isonicotinoyl salts. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.09.015] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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53
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Oriana S, Fracassi A, Archer C, Yamakoshi Y. Covalent Surface Modification of Lipid Nanoparticles by Rapid Potassium Acyltrifluoroborate Amide Ligation. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2018; 34:13244-13251. [PMID: 30343580 DOI: 10.1021/acs.langmuir.8b01945] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Because of the recent increasing demand for the synthetic biomimetic nanoparticles as in vivo carriers of drugs and imaging probes, it is very important to develop reliable, stable, and orthogonal methods for surface functionalization of the particles. To address these issues, in this study, a recently reported chemoselective amide-forming ligation reaction [potassium acyltrifluoroborate (KAT) ligation] was employed for the first time, as a mean to provide the surface functionalization of particles for creating covalent attachments of bioactive molecules. A KAT derivative of oleic acid (OA-KAT, 1) was added to a mixture of three lipid components (triolein, phosphatidyl choline, and cholesteryl oleate), which have been commonly used as substrates for lipid nanoparticles. After sonication and extrusion in a buffer, successfully obtained lipid nanoparticles containing OA-KAT (NP-KAT) resulted to be well-dispersed with mean diameters of about 40-70 nm by dynamic light scattering. After preliminary confirmation of the fast and efficient KAT ligation in a solution phase using the identical reaction substrates, the "on-surface (on-particle)" KAT ligation on the NP-KAT was tested with an N-hydroxylamine derivative of fluorescein 2. The ligation was carried out in a phosphate buffer (10 mM, pH 5.2) at room temperature with reactant concentration ranges of 250 μM. Reaction efficiency was evaluated based on the amount of boron (determined by inductively coupled plasma mass spectrometry) and fluorescein (determined by fluorescence emission) in the particles before and after the reaction. As a result, the reaction proceeded in a significantly efficient way with ca. 40-50% conversion of the OA-KAT incorporated in the particles. Taken together with the fact that KAT ligation does not require any additional coupling reagents, these results indicated that the "on-surface" chemical functionalization of nanoparticles by KAT ligation is a useful method and represents a powerful and potentially versatile tool for the production of nanoparticles with a variety of covalently functionalized biomolecules and probes.
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Affiliation(s)
- Sean Oriana
- Laboratorium für Organische Chemie , ETH Zürich , Vladimir-Prelog-Weg 3 , CH8093 Zürich , Switzerland
- Institut für Geochemie und Petrologie , ETH Zürich , Clausiusstrasse 25 , CH8092 Zürich , Switzerland
| | - Alessandro Fracassi
- Laboratorium für Organische Chemie , ETH Zürich , Vladimir-Prelog-Weg 3 , CH8093 Zürich , Switzerland
- Institut für Geochemie und Petrologie , ETH Zürich , Clausiusstrasse 25 , CH8092 Zürich , Switzerland
| | - Corey Archer
- Laboratorium für Organische Chemie , ETH Zürich , Vladimir-Prelog-Weg 3 , CH8093 Zürich , Switzerland
- Institut für Geochemie und Petrologie , ETH Zürich , Clausiusstrasse 25 , CH8092 Zürich , Switzerland
| | - Yoko Yamakoshi
- Laboratorium für Organische Chemie , ETH Zürich , Vladimir-Prelog-Weg 3 , CH8093 Zürich , Switzerland
- Institut für Geochemie und Petrologie , ETH Zürich , Clausiusstrasse 25 , CH8092 Zürich , Switzerland
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54
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He Y, Wang Y, Liang X, Huang B, Wang H, Pan YM. Palladium-Catalyzed Three-Component Reaction: A Novel Method for the Synthesis of N-Acyl Propiolamides. Org Lett 2018; 20:7117-7120. [PMID: 30362763 DOI: 10.1021/acs.orglett.8b03068] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Palladium-catalyzed three-component reactions between terminal alkynes, isonitriles, and sodium carboxylates have been developed. This novel and operationally simple methodology provides an alternative for the synthesis of N-acyl propiolamide derivatives under mild conditions using isonitriles as the amine source and sodium carboxylates as the oxygen and acyl source.
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Affiliation(s)
- Yan He
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources , School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University , Guilin 541004 , People's Republic of China
| | - Yingchun Wang
- College of Chemistry and Chemical Engineering , Jishou University , Jishou 416000 , People's Republic of China
| | - Xinping Liang
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources , School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University , Guilin 541004 , People's Republic of China
| | - Bin Huang
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources , School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University , Guilin 541004 , People's Republic of China
| | - Hengshan Wang
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources , School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University , Guilin 541004 , People's Republic of China
| | - Ying-Ming Pan
- State Key Laboratory for Chemistry and Molecular Engineering of Medicinal Resources , School of Chemistry and Pharmaceutical Sciences of Guangxi Normal University , Guilin 541004 , People's Republic of China
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55
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Gu Y, Schauenburg D, Bode JW, Johnson JA. Leaving Groups as Traceless Topological Modifiers for the Synthesis of Topologically Isomeric Polymer Networks. J Am Chem Soc 2018; 140:14033-14037. [DOI: 10.1021/jacs.8b07967] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Yuwei Gu
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Dominik Schauenburg
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Jeremiah A. Johnson
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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56
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Devaraj NK. The Future of Bioorthogonal Chemistry. ACS CENTRAL SCIENCE 2018; 4:952-959. [PMID: 30159392 PMCID: PMC6107859 DOI: 10.1021/acscentsci.8b00251] [Citation(s) in RCA: 322] [Impact Index Per Article: 53.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2018] [Indexed: 05/18/2023]
Abstract
Bioorthogonal reactions have found widespread use in applications ranging from glycan engineering to in vivo imaging. Researchers have devised numerous reactions that can be predictably performed in a biological setting. Depending on the requirements of the intended application, one or more reactions from the available toolkit can be readily deployed. As an increasing number of investigators explore and apply chemical reactions in living systems, it is clear that there are a myriad of ways in which the field may advance. This article presents an outlook on the future of bioorthogonal chemistry. I discuss currently emerging opportunities and speculate on how bioorthogonal reactions might be applied in research and translational settings. I also outline hurdles that must be cleared if progress toward these goals is to be made. Given the incredible past successes of bioorthogonal chemistry and the rapid pace of innovations in the field, the future is undoubtedly very bright.
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57
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Enzymatic clickable functionalization of peptides via computationally engineered peptide amidase. CHINESE CHEM LETT 2018. [DOI: 10.1016/j.cclet.2018.03.033] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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58
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Iramain MA, Davies L, Brandán SA. Evaluating structures, properties and vibrational and electronic spectra of the potassium 2-isonicotinoyltrifluoroborate salt. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.02.098] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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59
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Ji X, Gao B, Zhou X, Liu Z, Huang H. Palladium-Catalyzed Regioselective Hydroaminocarbonylation of Alkynes to α,β-Unsaturated Primary Amides with Ammonium Chloride. J Org Chem 2018; 83:10134-10141. [DOI: 10.1021/acs.joc.8b01405] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Xiaolei Ji
- College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310024, China
| | - Bao Gao
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry, Center for Excellence in Molecular Synthesis, University of Science and Technology of China, Chinese Academy of Sciences, Hefei 230026, P.R. China
| | - Xibing Zhou
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry, Center for Excellence in Molecular Synthesis, University of Science and Technology of China, Chinese Academy of Sciences, Hefei 230026, P.R. China
| | - Zongjian Liu
- College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310024, China
| | - Hanmin Huang
- College of Chemical Engineering, Zhejiang University of Technology, Hangzhou 310024, China
- Hefei National Laboratory for Physical Sciences at the Microscale and Department of Chemistry, Center for Excellence in Molecular Synthesis, University of Science and Technology of China, Chinese Academy of Sciences, Hefei 230026, P.R. China
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60
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Shiro T, Schuhmacher A, Jackl MK, Bode JW. Facile synthesis of α-aminoboronic acids from amines and potassium acyltrifluoroborates (KATs) via trifluoroborate-iminiums (TIMs). Chem Sci 2018; 9:5191-5196. [PMID: 29997873 PMCID: PMC6000978 DOI: 10.1039/c8sc01486h] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2018] [Accepted: 05/12/2018] [Indexed: 12/26/2022] Open
Abstract
We report the facile formation of trifluoroborate-iminiums (TIMs) from potassium acyltrifluoroborates (KATs) and the transformation of TIMs to α-aminotrifluoroborates by reduction or Grignard additions. Conditions for the hydrolysis of α-aminotrifluoroborates to α-aminoboronic acids, which are important biologically active compounds, were established. This new methodology allows access to sterically demanding α-aminoboronic acids that are not easily prepared with currently available methods. This work also introduces TIMs, that can be easily prepared and handled, as a new category of functional groups that serve as precursors to valuable organic compounds.
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Affiliation(s)
- Tomoya Shiro
- Laboratorium fur Organische Chemie , Department of Chemistry and Applied Biosciences , ETH Zurich , Zürich , Switzerland 8093 . ; http://www.bode.ethz.ch
| | - Anne Schuhmacher
- Laboratorium fur Organische Chemie , Department of Chemistry and Applied Biosciences , ETH Zurich , Zürich , Switzerland 8093 . ; http://www.bode.ethz.ch
| | - Moritz K Jackl
- Laboratorium fur Organische Chemie , Department of Chemistry and Applied Biosciences , ETH Zurich , Zürich , Switzerland 8093 . ; http://www.bode.ethz.ch
| | - Jeffrey W Bode
- Laboratorium fur Organische Chemie , Department of Chemistry and Applied Biosciences , ETH Zurich , Zürich , Switzerland 8093 . ; http://www.bode.ethz.ch
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61
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Liu SM, Wu D, Bode JW. One-Step Synthesis of Aliphatic Potassium Acyltrifluoroborates (KATs) from Organocuprates. Org Lett 2018; 20:2378-2381. [DOI: 10.1021/acs.orglett.8b00720] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Sizhou M. Liu
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Dino Wu
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
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62
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63
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White CJ, Bode JW. PEGylation and Dimerization of Expressed Proteins under Near Equimolar Conditions with Potassium 2-Pyridyl Acyltrifluoroborates. ACS CENTRAL SCIENCE 2018; 4:197-206. [PMID: 29532019 PMCID: PMC5833003 DOI: 10.1021/acscentsci.7b00432] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Indexed: 05/27/2023]
Abstract
The covalent conjugation of large, functionalized molecules remains a frontier in synthetic chemistry, as it requires rapid, chemoselective reactions. The potassium acyltrifluoroborate (KAT)-hydroxylamine amide-forming ligation shows promise for conjugations of biomolecules under aqueous, acidic conditions, but the variants reported to date are not suited to ligations at micromolar concentrations. We now report that 2-pyridyl KATs display significantly enhanced ligation kinetics over their aryl counterparts. Following their facile, one-step incorporation onto the termini of polyethylene glycol (PEG) chains, we show that 2-pyridyl KATs can be applied to the construction of protein-polymer conjugates in excellent (>95%) yield. Four distinct expressed, folded proteins equipped with a hydroxylamine could be PEGylated with 2-20 kDa 2-pyridyl mPEG KATs in high yield and with near-equimolar amounts of coupling partners. Furthermore, the use of a bis 2-pyridyl PEG KAT enables the covalent homodimerization of proteins with good conversion. The 2-pyridyl KAT ligation offers an effective alternative to conventional protein-polymer conjugation by operating under aqueous acidic conditions well suited for the handling of folded proteins.
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Affiliation(s)
- Christopher J. White
- Laboratorium für Organische Chemie,
Department of Chemistry and Applied Biosciences, ETH Zürich, 8093, Zürich, Switzerland
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie,
Department of Chemistry and Applied Biosciences, ETH Zürich, 8093, Zürich, Switzerland
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64
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Jiang YY, Liu TT, Zhang RX, Xu ZY, Sun X, Bi S. Mechanism and Rate-Determining Factors of Amide Bond Formation through Acyl Transfer of Mixed Carboxylic–Carbamic Anhydrides: A Computational Study. J Org Chem 2018; 83:2676-2685. [DOI: 10.1021/acs.joc.7b03107] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Yuan-Ye Jiang
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Tian-Tian Liu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Rui-Xue Zhang
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Zhong-Yan Xu
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Xue Sun
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
| | - Siwei Bi
- School of Chemistry and Chemical Engineering, Qufu Normal University, Qufu 273165, People’s Republic of China
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65
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Schauenburg D, Osuna Gálvez A, Bode JW. Covalently functionalized amide cross-linked hydrogels from primary amines and polyethylene glycol acyltrifluoroborates (PEG-KATs). J Mater Chem B 2018; 6:4775-4782. [DOI: 10.1039/c8tb01028e] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
A new method for the rapid preparation of chemically cross-linked hydrogels based on a multi-arm polyethylene glycol (PEG) bearing potassium acyl trifluoroborate (KAT) functional groups with multi-dentate amines is described.
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Affiliation(s)
- Dominik Schauenburg
- Laboratorium für Organische Chemie
- Department of Chemistry and Applied Biosciences
- ETH Zürich
- 8093 Zürich
- Switzerland
| | - Alberto Osuna Gálvez
- Laboratorium für Organische Chemie
- Department of Chemistry and Applied Biosciences
- ETH Zürich
- 8093 Zürich
- Switzerland
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie
- Department of Chemistry and Applied Biosciences
- ETH Zürich
- 8093 Zürich
- Switzerland
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66
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Taguchi J, Ikeda T, Takahashi R, Sasaki I, Ogasawara Y, Dairi T, Kato N, Yamamoto Y, Bode JW, Ito H. Synthesis of Acylborons by Ozonolysis of Alkenylboronates: Preparation of an Enantioenriched Amino Acid Acylboronate. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201707933] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Jumpei Taguchi
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Toshiki Ikeda
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Rina Takahashi
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Ikuo Sasaki
- Department of Chemistry and Biological Science; College of Science and Engineering; Aoyama Gakuin University; 5-10-1, Fuchinobe Chuo-ku, Sagamihara-shi 252-5258 Japan
| | - Yasushi Ogasawara
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Tohru Dairi
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Naoya Kato
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Yasunori Yamamoto
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie; Department of Chemistry and Applied Bioscience; ETH Zürich; 8093 Zürich Switzerland
| | - Hajime Ito
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
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67
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Taguchi J, Ikeda T, Takahashi R, Sasaki I, Ogasawara Y, Dairi T, Kato N, Yamamoto Y, Bode JW, Ito H. Synthesis of Acylborons by Ozonolysis of Alkenylboronates: Preparation of an Enantioenriched Amino Acid Acylboronate. Angew Chem Int Ed Engl 2017; 56:13847-13851. [DOI: 10.1002/anie.201707933] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Indexed: 12/15/2022]
Affiliation(s)
- Jumpei Taguchi
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Toshiki Ikeda
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Rina Takahashi
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Ikuo Sasaki
- Department of Chemistry and Biological Science; College of Science and Engineering; Aoyama Gakuin University; 5-10-1, Fuchinobe Chuo-ku, Sagamihara-shi 252-5258 Japan
| | - Yasushi Ogasawara
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Tohru Dairi
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Naoya Kato
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Yasunori Yamamoto
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie; Department of Chemistry and Applied Bioscience; ETH Zürich; 8093 Zürich Switzerland
| | - Hajime Ito
- Division of Applied Chemistry and Frontier Chemistry Center; Faculty of Engineering; Hokkaido University; Kita 13 Nishi 8 Kita-ku Sapporo Hokkaido 060-8628 Japan
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68
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Campos J, Nova A, Kolychev EL, Aldridge S. A Combined Experimental/Computational Study of the Mechanism of a Palladium-Catalyzed Bora-Negishi Reaction. Chemistry 2017; 23:12655-12667. [DOI: 10.1002/chem.201702703] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Indexed: 12/11/2022]
Affiliation(s)
- Jesús Campos
- Inorganic Chemistry Laboratory; South Parks Road Oxford OX1 3QR UK
- Instituto de Investigaciones Químicas (IIQ); Departamento de Química Inorgánica and Centro de Innovación en Química Avanzada (ORFEO-CINQA); Universidad de Sevilla and Consejo Superior de Investigaciones Científicas (CSIC).; Avenida Américo Vespucio 49 41092 Sevilla Spain
| | - Ainara Nova
- Centre for Theoretical and Computational Chemistry (CTCC); Department of Chemistry; University of Oslo, P. O. Box 1033 Blindern; 0315 Oslo Norway
| | | | - Simon Aldridge
- Inorganic Chemistry Laboratory; South Parks Road Oxford OX1 3QR UK
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69
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Lee HG, Lautrette G, Pentelute BL, Buchwald SL. Palladium-Mediated Arylation of Lysine in Unprotected Peptides. Angew Chem Int Ed Engl 2017; 56:3177-3181. [PMID: 28206688 DOI: 10.1002/anie.201611202] [Citation(s) in RCA: 95] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2016] [Indexed: 11/09/2022]
Abstract
A mild method for the arylation of lysine in an unprotected peptide is presented. In the presence of a preformed biarylphosphine-supported palladium(II)-aryl complex and a weak base, lysine amino groups underwent C-N bond formation at room temperature. The process generally exhibited high selectivity for lysine over other amino acids containing nucleophilic side chains and was applicable to the conjugation of a variety of organic compounds, including complex drug molecules, with an array of peptides. Finally, this method was also successfully applied to the formation of cyclic peptides by macrocyclization.
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Affiliation(s)
- Hong Geun Lee
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA
| | - Guillaume Lautrette
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA
| | - Bradley L Pentelute
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA
| | - Stephen L Buchwald
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA, 02139, USA
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70
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Lee HG, Lautrette G, Pentelute BL, Buchwald SL. Palladium-Mediated Arylation of Lysine in Unprotected Peptides. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611202] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Hong Geun Lee
- Department of Chemistry; Massachusetts Institute of Technology; 77 Massachusetts Avenue Cambridge MA 02139 USA
| | - Guillaume Lautrette
- Department of Chemistry; Massachusetts Institute of Technology; 77 Massachusetts Avenue Cambridge MA 02139 USA
| | - Bradley L. Pentelute
- Department of Chemistry; Massachusetts Institute of Technology; 77 Massachusetts Avenue Cambridge MA 02139 USA
| | - Stephen L. Buchwald
- Department of Chemistry; Massachusetts Institute of Technology; 77 Massachusetts Avenue Cambridge MA 02139 USA
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71
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Mazunin D, Bode JW. Potassium Acyltrifluoroborate (KAT) Ligations are Orthogonal to Thiol-Michaeland SPAAC Reactions: Covalent Dual Immobilization of Proteins onto Synthetic PEG Hydrogels. Helv Chim Acta 2017. [DOI: 10.1002/hlca.201600311] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Dmitry Mazunin
- Laboratorium für Organische Chemie; Department of Chemistry and Applied Biosciences; ETH Zürich; Vladimir-Prelog-Weg 3 CH-8093 Zürich
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie; Department of Chemistry and Applied Biosciences; ETH Zürich; Vladimir-Prelog-Weg 3 CH-8093 Zürich
- Institute of Transformative Bio-Molecules (WPI-ITbM); Nagoya University; Chikusa, Nagoya 464-8602 Japan
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72
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Gálvez AO, Schaack CP, Noda H, Bode JW. Chemoselective Acylation of Primary Amines and Amides with Potassium Acyltrifluoroborates under Acidic Conditions. J Am Chem Soc 2017; 139:1826-1829. [PMID: 28118000 DOI: 10.1021/jacs.7b00059] [Citation(s) in RCA: 73] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Current methods for constructing amide bonds join amines and carboxylic acids by dehydrative couplings-processes that usually require organic solvents, expensive and often dangerous coupling reagents, and masking other functional groups. Here we describe an amide formation using primary amines and potassium acyltrifluoroborates promoted by simple chlorinating agents that proceeds rapidly in water. The reaction is fast at acidic pH and tolerates alcohols, carboxylic acids, and even secondary amines in the substrates. It is applicable to the functionalization of primary amides, sulfonamides, and other N-functional groups that typically resist classical acylations and can be applied to late-stage functionalizations.
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Affiliation(s)
- Alberto Osuna Gálvez
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH-Zürich , 8093 Zürich, Switzerland
| | - Cédric P Schaack
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH-Zürich , 8093 Zürich, Switzerland
| | - Hidetoshi Noda
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH-Zürich , 8093 Zürich, Switzerland
| | - Jeffrey W Bode
- Laboratorium für Organische Chemie, Department of Chemistry and Applied Biosciences, ETH-Zürich , 8093 Zürich, Switzerland
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73
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Scharnagl FK, Bose SK, Marder TB. Acylboranes: synthetic strategies and applications. Org Biomol Chem 2017; 15:1738-1752. [DOI: 10.1039/c6ob02425d] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Acylboranes are an attractive class of compounds, of which the synthesis has very recently been documented as summarised in this review. Access to these compounds provides a path to study their properties and reactivity.
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Affiliation(s)
- Florian Korbinian Scharnagl
- Institut für Anorganische Chemie and Institute for Sustainable Chemistry & Catalysis with Boron
- Julius-Maximilians-Universität Würzburg
- 97074 Würzburg
- Germany
| | - Shubhankar Kumar Bose
- Institut für Anorganische Chemie and Institute for Sustainable Chemistry & Catalysis with Boron
- Julius-Maximilians-Universität Würzburg
- 97074 Würzburg
- Germany
- Centre for Nano and Material Sciences (CNMS)
| | - Todd B. Marder
- Institut für Anorganische Chemie and Institute for Sustainable Chemistry & Catalysis with Boron
- Julius-Maximilians-Universität Würzburg
- 97074 Würzburg
- Germany
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74
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Zhu J, Gao B, Huang H. Palladium-catalyzed highly regioselective hydroaminocarbonylation of aromatic alkenes to branched amides. Org Biomol Chem 2017; 15:2910-2913. [DOI: 10.1039/c7ob00371d] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Pd(t-Bu3P)2 has been successfully identified as an efficient catalyst for the hydroaminocarbonylation of aromatic alkenes to branched amides under relatively mild reaction conditions.
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Affiliation(s)
- Jinping Zhu
- College of Chemical Engineering
- Zhejiang University of Technology
- Hangzhou
- China
| | - Bao Gao
- Department of Chemistry
- University of Science and Technology of China
- Hefei
- China
| | - Hanmin Huang
- College of Chemical Engineering
- Zhejiang University of Technology
- Hangzhou
- China
- Department of Chemistry
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75
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Liu SM, Mazunin D, Pattabiraman VR, Bode JW. Synthesis of Bifunctional Potassium Acyltrifluoroborates. Org Lett 2016; 18:5336-5339. [DOI: 10.1021/acs.orglett.6b02652] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Sizhou M. Liu
- Laboratorium
für Organische
Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Dmitry Mazunin
- Laboratorium
für Organische
Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Vijaya R. Pattabiraman
- Laboratorium
für Organische
Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
| | - Jeffrey W. Bode
- Laboratorium
für Organische
Chemie, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland
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76
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Abstract
The present review offers an overview of nonclassical (e.g., with no pre- or in situ activation of a carboxylic acid partner) approaches for the construction of amide bonds. The review aims to comprehensively discuss relevant work, which was mainly done in the field in the last 20 years. Organization of the data follows a subdivision according to substrate classes: catalytic direct formation of amides from carboxylic and amines ( section 2 ); the use of carboxylic acid surrogates ( section 3 ); and the use of amine surrogates ( section 4 ). The ligation strategies (NCL, Staudinger, KAHA, KATs, etc.) that could involve both carboxylic acid and amine surrogates are treated separately in section 5 .
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Affiliation(s)
- Renata Marcia de Figueiredo
- Institut Charles Gerhardt de Montpellier (ICGM), UMR 5253-CNRS-UM-ENSCM, Ecole Nationale Supérieure de Chimie , 8 rue de l'Ecole Normale, 34296 Montpellier Cedex 5, France
| | - Jean-Simon Suppo
- Institut Charles Gerhardt de Montpellier (ICGM), UMR 5253-CNRS-UM-ENSCM, Ecole Nationale Supérieure de Chimie , 8 rue de l'Ecole Normale, 34296 Montpellier Cedex 5, France
| | - Jean-Marc Campagne
- Institut Charles Gerhardt de Montpellier (ICGM), UMR 5253-CNRS-UM-ENSCM, Ecole Nationale Supérieure de Chimie , 8 rue de l'Ecole Normale, 34296 Montpellier Cedex 5, France
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77
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Hu Y, Shen Z, Huang H. Palladium-Catalyzed Intramolecular Hydroaminocarbonylation to Lactams: Additive-Free Protocol Initiated by Palladium Hydride. ACS Catal 2016. [DOI: 10.1021/acscatal.6b01939] [Citation(s) in RCA: 58] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Yue Hu
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou
Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000, People’s Republic of China
- University of Chinese
Academy of Sciences, Beijing, 100049, People’s Republic of China
| | - Zhiqiang Shen
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou
Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000, People’s Republic of China
| | - Hanmin Huang
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou
Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000, People’s Republic of China
- Department
of Chemistry, University of Science and Technology of China, Hefei, 230026, People’s Republic of China
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78
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Krause T, Baader S, Erb B, Gooßen LJ. Atom-economic catalytic amide synthesis from amines and carboxylic acids activated in situ with acetylenes. Nat Commun 2016; 7:11732. [PMID: 27282773 PMCID: PMC4906407 DOI: 10.1038/ncomms11732] [Citation(s) in RCA: 67] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2015] [Accepted: 04/25/2016] [Indexed: 12/14/2022] Open
Abstract
Amide bond-forming reactions are of tremendous significance in synthetic chemistry. Methodological research has, in the past, focused on efficiency and selectivity, and these have reached impressive levels. However, the unacceptable amounts of waste produced have led the ACS GCI Roundtable to label 'amide bond formation avoiding poor atom economy' as the most pressing target for sustainable synthetic method development. In response to this acute demand, we herein disclose an efficient one-pot amide coupling protocol that is based on simple alkynes as coupling reagents: in the presence of a dichloro[(2,6,10-dodecatriene)-1,12-diyl]ruthenium catalyst, carboxylate salts of primary or secondary amines react with acetylene or ethoxyacetylene to vinyl ester intermediates, which undergo aminolysis to give the corresponding amides along only with volatile acetaldehyde or ethyl acetate, respectively. The new amide synthesis is broadly applicable to the synthesis of structurally diverse amides, including dipeptides.
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Affiliation(s)
- Thilo Krause
- FB Chemie-Organische Chemie, Technische Universität Kaiserslautern, Erwin Schrödinger Strasse Geb. 54, 67663 Kaiserslautern, Germany
| | - Sabrina Baader
- FB Chemie-Organische Chemie, Technische Universität Kaiserslautern, Erwin Schrödinger Strasse Geb. 54, 67663 Kaiserslautern, Germany
| | - Benjamin Erb
- FB Chemie-Organische Chemie, Technische Universität Kaiserslautern, Erwin Schrödinger Strasse Geb. 54, 67663 Kaiserslautern, Germany
| | - Lukas J Gooßen
- FB Chemie-Organische Chemie, Technische Universität Kaiserslautern, Erwin Schrödinger Strasse Geb. 54, 67663 Kaiserslautern, Germany
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79
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Bondalapati S, Jbara M, Brik A. Expanding the chemical toolbox for the synthesis of large and uniquely modified proteins. Nat Chem 2016; 8:407-18. [DOI: 10.1038/nchem.2476] [Citation(s) in RCA: 245] [Impact Index Per Article: 30.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2015] [Accepted: 02/04/2016] [Indexed: 12/18/2022]
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80
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Vinogradov AA, Simon MD, Pentelute BL. C-Terminal Modification of Fully Unprotected Peptide Hydrazides via in Situ Generation of Isocyanates. Org Lett 2016; 18:1222-5. [DOI: 10.1021/acs.orglett.5b03625] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Alexander A. Vinogradov
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Mark D. Simon
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Bradley L. Pentelute
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
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81
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Zhang G, Ji X, Yu H, Yang L, Jiao P, Huang H. Palladium-catalyzed hydroaminocarbonylation of alkenes with amines promoted by weak acid. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2015.12.031] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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82
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Noda H, Bode JW. Synthesis and reactivities of monofluoro acylboronates in chemoselective amide bond forming ligation with hydroxylamines. Org Biomol Chem 2016; 14:16-20. [DOI: 10.1039/c5ob02118a] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Synthesis and reactivities of monofluoroacylboronates are described in the context of bioorganic chemistry and chemical ligation.
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Affiliation(s)
- Hidetoshi Noda
- Laboratorium für Organische Chemie
- Department of Chemistry and Applied Bioscience
- 8093 Zürich
- Switzerland
| | - Jeffrey W. Bode
- Laboratorium für Organische Chemie
- Department of Chemistry and Applied Bioscience
- 8093 Zürich
- Switzerland
- Institute of Transformative Bio-Molecules (WPI-ITbM)
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83
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Dong Y, Sun S, Yang F, Zhu Y, Zhu W, Qiao H, Wu Y, Wu Y. Pd-catalyzed aminocarbonylation of alkynes with amines using Co2(CO)8 as a carbonyl source. Org Chem Front 2016. [DOI: 10.1039/c6qo00075d] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A facile protocol for aminocarbonylation of alkynes with amines at room temperature was developed using a metal carbonyl source.
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Affiliation(s)
- Yaxi Dong
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
| | - Suyan Sun
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
| | - Fan Yang
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
| | - Yu Zhu
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
| | - Weiguo Zhu
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
| | - Huijie Qiao
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
| | - Yusheng Wu
- Tetranov Biopharm
- LLC
- Zhengzhou
- China
- Collaborative Innovation Center of New Drug Research and Safety Evaluation
| | - Yangjie Wu
- The College of Chemistry and Molecular Engineering
- Henan Key Laboratory of Chemical Biology and Organic Chemistry
- Key Laboratory of Applied Chemistry of Henan Universities
- Zhengzhou University
- Zhengzhou 450052
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84
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Patterson DM, Prescher JA. Orthogonal bioorthogonal chemistries. Curr Opin Chem Biol 2015; 28:141-9. [DOI: 10.1016/j.cbpa.2015.07.006] [Citation(s) in RCA: 95] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2015] [Revised: 06/20/2015] [Accepted: 07/17/2015] [Indexed: 01/20/2023]
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85
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Campos J, Aldridge S. Catalytic Borylation using an Air‐Stable Zinc Boryl Reagent: Systematic Access to Elusive Acylboranes. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201507627] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Jesús Campos
- Inorganic Chemistry Laboratory, Dept. of Chemistry, University of Oxford, South Parks Rd, Oxford (UK) OX1 3QR
| | - Simon Aldridge
- Inorganic Chemistry Laboratory, Dept. of Chemistry, University of Oxford, South Parks Rd, Oxford (UK) OX1 3QR
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86
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Campos J, Aldridge S. Catalytic Borylation using an Air-Stable Zinc Boryl Reagent: Systematic Access to Elusive Acylboranes. Angew Chem Int Ed Engl 2015; 54:14159-63. [DOI: 10.1002/anie.201507627] [Citation(s) in RCA: 49] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2015] [Indexed: 12/11/2022]
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87
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Geng X, Wang C. Rhenium-catalyzed C-H aminocarbonylation of azobenzenes with isocyanates. Org Biomol Chem 2015; 13:7619-23. [PMID: 26100519 DOI: 10.1039/c5ob01121c] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
The first C-H aminocarbonylation of azobenzenes with isocyanates is achieved by using rhenium-catalysis, which provides an expedient and atom-economical access to varied o-azobenzamides from readily available starting materials. The reaction efficiency can be enhanced by the catalytic use of sodium acetate via accelerated C-H bond activation.
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Affiliation(s)
- Xiaoyu Geng
- Beijing National Laboratory for Molecular Sciences, CAS Key Laboratory of Molecular Recognition and Function, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China.
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88
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Han S, Mishra NK, Sharma S, Park J, Choi M, Lee SY, Oh JS, Jung YH, Kim IS. Synthesis of N-Sulfonylamidated and Amidated Azobenzenes under Rhodium Catalysis. J Org Chem 2015; 80:8026-35. [DOI: 10.1021/acs.joc.5b01149] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sangil Han
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - Neeraj Kumar Mishra
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - Satyasheel Sharma
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - Jihye Park
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - Miji Choi
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - Seok-Yong Lee
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - Joa Sub Oh
- College
of Pharmacy, Dankook University, Cheonan 330-714, Republic of Korea
| | - Young Hoon Jung
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
| | - In Su Kim
- School
of Pharmacy, Sungkyunkwan University, Suwon 440-746, Republic of Korea
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89
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Abstract
Recently, peptides have been validated to address intracellular targets and/or to be orally bioavailable. This review describes some of these scaffolds, offers insight in new cyclization methodologies thought to be beneficial to enhance permeability, and highlights modification on peptides thought to improve oral bioavailability. In this context, side chains and back-bone derivatization beneficial to encourage cellular uptake are presented. In addition, new methodologies supporting the assessment of permeability are discussed.
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90
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Mazunin D, Broguiere N, Zenobi-Wong M, Bode JW. Synthesis of Biocompatible PEG Hydrogels by pH-Sensitive Potassium Acyltrifluoroborate (KAT) Amide Ligations. ACS Biomater Sci Eng 2015; 1:456-462. [DOI: 10.1021/acsbiomaterials.5b00145] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Dmitry Mazunin
- Laboratorium
für Organische Chemie, Department of Chemistry and Applied
Biosciences, ETH−Zürich, Vladimir-Prelog-Weg 3, 8093 Zürich, Switzerland
| | - Nicolas Broguiere
- Cartilage
Engineering and Regeneration Laboratory, Department of Health Science
and Technology, ETH−Zürich, Otto-Stern-Weg 7, 8093 Zürich, Switzerland
| | - Marcy Zenobi-Wong
- Cartilage
Engineering and Regeneration Laboratory, Department of Health Science
and Technology, ETH−Zürich, Otto-Stern-Weg 7, 8093 Zürich, Switzerland
| | - Jeffrey W. Bode
- Laboratorium
für Organische Chemie, Department of Chemistry and Applied
Biosciences, ETH−Zürich, Vladimir-Prelog-Weg 3, 8093 Zürich, Switzerland
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91
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Raj M, Wu H, Blosser SL, Vittoria MA, Arora PS. Aldehyde capture ligation for synthesis of native peptide bonds. J Am Chem Soc 2015; 137:6932-40. [PMID: 25966041 DOI: 10.1021/jacs.5b03538] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Chemoselective reactions for amide bond formation have transformed the ability to access synthetic proteins and other bioconjugates through ligation of fragments. In these ligations, amide bond formation is accelerated by transient enforcement of an intramolecular reaction between the carboxyl and the amine termini of two fragments. Building on this principle, we introduce an aldehyde capture ligation that parlays the high chemoselective reactivity of aldehydes and amines to enforce amide bond formation between amino acid residues and peptides that are difficult to ligate by existing technologies.
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Affiliation(s)
- Monika Raj
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Huabin Wu
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Sarah L Blosser
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Marc A Vittoria
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
| | - Paramjit S Arora
- Department of Chemistry, New York University, 100 Washington Square East, New York, New York 10003, United States
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92
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Zhang G, Gao B, Huang H. Palladium-catalyzed hydroaminocarbonylation of alkenes with amines: a strategy to overcome the basicity barrier imparted by aliphatic amines. Angew Chem Int Ed Engl 2015; 54:7657-61. [PMID: 25959632 DOI: 10.1002/anie.201502405] [Citation(s) in RCA: 114] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2015] [Revised: 04/20/2015] [Indexed: 12/14/2022]
Abstract
A novel and efficient palladium-catalyzed hydroaminocarbonylation of alkenes with aminals has been developed under mild reaction conditions, and allows the synthesis of a wide range of N-alkyl linear amides in good yields with high regioselectivity. On the basis of this method, a cooperative catalytic system operating by the synergistic combination of palladium, paraformaldehyde, and acid was established for promoting the hydroaminocarbonylation of alkenes with both aromatic and aliphatic amines, which do not react well under conventional palladium-catalyzed hydroaminocarbonylation.
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Affiliation(s)
- Guoying Zhang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000 (China)
| | - Bao Gao
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000 (China)
| | - Hanmin Huang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000 (China).
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93
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Zhang G, Gao B, Huang H. Palladium-Catalyzed Hydroaminocarbonylation of Alkenes with Amines: A Strategy to Overcome the Basicity Barrier Imparted by Aliphatic Amines. Angew Chem Int Ed Engl 2015. [DOI: 10.1002/ange.201502405] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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94
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Saito F, Noda H, Bode JW. Critical evaluation and rate constants of chemoselective ligation reactions for stoichiometric conjugations in water. ACS Chem Biol 2015; 10:1026-33. [PMID: 25572124 DOI: 10.1021/cb5006728] [Citation(s) in RCA: 129] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Chemoselective ligation reactions have contributed immensely to the development of organic synthesis and chemical biology. However, the ligation of stoichiometric amounts of large molecules for applications such as protein-protein conjugates is still challenging. Conjugation reactions need to be fast enough to proceed under dilute conditions and chemoselective in the presence of unprotected functional groups; the starting materials and products must be stable under the reaction conditions. To compare known ligation reactions for their suitability under these conditions, we determined the second-order rate constants of ligation reactions using peptide substrates with unprotected functional groups. The reaction conditions, the chemoselectivity of the reactions, and the stability of the starting materials and products were carefully evaluated. In some cases, the stability could be improved by modifying the substrate structure. These data obtained under the ligation conditions provide a useful guide to choose an appropriate ligation reaction for synthesis of large molecules by covalent ligation reactions of unprotected substrates in water.
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Affiliation(s)
- Fumito Saito
- Laboratorium
für Organische Chemie, Department of Chemistry and Applied
Biosciences, ETH-Zürich, 8093 Zürich, Switzerland
| | - Hidetoshi Noda
- Laboratorium
für Organische Chemie, Department of Chemistry and Applied
Biosciences, ETH-Zürich, 8093 Zürich, Switzerland
| | - Jeffrey W. Bode
- Laboratorium
für Organische Chemie, Department of Chemistry and Applied
Biosciences, ETH-Zürich, 8093 Zürich, Switzerland
- Institute
of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Chikusa, Nagoya 464-8602, Japan
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95
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Noda H, Bode JW. Synthesis of Chemically and Configurationally Stable Monofluoro Acylboronates: Effect of Ligand Structure on their Formation, Properties, and Reactivities. J Am Chem Soc 2015; 137:3958-66. [DOI: 10.1021/jacs.5b00822] [Citation(s) in RCA: 54] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Hidetoshi Noda
- LaboratoriumfurOrganischeChemie,
Department of Chemistry and Applied Biosciences, ETH−Zurich, 8093 Zurich, Switzerland
| | - Jeffrey W. Bode
- LaboratoriumfurOrganischeChemie,
Department of Chemistry and Applied Biosciences, ETH−Zurich, 8093 Zurich, Switzerland
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96
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Kline T, Steiner AR, Penta K, Sato AK, Hallam TJ, Yin G. Methods to Make Homogenous Antibody Drug Conjugates. Pharm Res 2014; 32:3480-93. [PMID: 25511917 PMCID: PMC4596908 DOI: 10.1007/s11095-014-1596-8] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2014] [Accepted: 12/03/2014] [Indexed: 02/06/2023]
Abstract
Antibody drug conjugates (ADCs) have progressed from hypothesis to approved therapeutics in less than 30 years, and the technologies available to modify both the antibodies and the cytotoxic drugs are expanding rapidly. For reasons well reviewed previously, the field is trending strongly toward homogeneous, defined antibody conjugation. In this review we present the antibody and small molecule chemistries that are currently used and being explored to develop specific, homogenous ADCs.
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Affiliation(s)
- Toni Kline
- Sutro Biopharma, Inc, 310 Utah Ave Ste 150, South San Francisco, California, 94080, USA
| | - Alexander R Steiner
- Sutro Biopharma, Inc, 310 Utah Ave Ste 150, South San Francisco, California, 94080, USA
| | - Kalyani Penta
- Sutro Biopharma, Inc, 310 Utah Ave Ste 150, South San Francisco, California, 94080, USA
| | - Aaron K Sato
- Sutro Biopharma, Inc, 310 Utah Ave Ste 150, South San Francisco, California, 94080, USA
| | - Trevor J Hallam
- Sutro Biopharma, Inc, 310 Utah Ave Ste 150, South San Francisco, California, 94080, USA
| | - Gang Yin
- Sutro Biopharma, Inc, 310 Utah Ave Ste 150, South San Francisco, California, 94080, USA.
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97
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Espeel P, Du Prez FE. “Click”-Inspired Chemistry in Macromolecular Science: Matching Recent Progress and User Expectations. Macromolecules 2014. [DOI: 10.1021/ma501386v] [Citation(s) in RCA: 207] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Pieter Espeel
- Department
of Organic and
Macromolecular Chemistry, Polymer Chemistry Research Group, Ghent University, Krijgslaan 281 S4-bis, B-9000 Ghent, Belgium
| | - Filip E. Du Prez
- Department
of Organic and
Macromolecular Chemistry, Polymer Chemistry Research Group, Ghent University, Krijgslaan 281 S4-bis, B-9000 Ghent, Belgium
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98
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Jouanno LA, Chevalier A, Sekkat N, Perzo N, Castel H, Romieu A, Lange N, Sabot C, Renard PY. Kondrat’eva Ligation: Diels–Alder-Based Irreversible Reaction for Bioconjugation. J Org Chem 2014; 79:10353-66. [DOI: 10.1021/jo501972m] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Laurie-Anne Jouanno
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Arnaud Chevalier
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Nawal Sekkat
- Section
des Sciences Pharmaceutiques, Université de Genève, Université de Lausanne, Quai Ernest Ansermet 30, CH-1211 Genève 4, Switzerland
| | - Nicolas Perzo
- Inserm
U982, Laboratory of Neuronal and Neuroendocrine Communication and
Differentiation (DC2N), Astrocyte and Vascular Niche, Institute of
Research and Biomedical Innovation (IRIB), PRES Normandy University, University of Rouen, 76821 Mont-Saint-Aignan Cedex, France
- North-West Cancéropole (CNO), 59008 Lille Cedex, France
| | - Hélène Castel
- Inserm
U982, Laboratory of Neuronal and Neuroendocrine Communication and
Differentiation (DC2N), Astrocyte and Vascular Niche, Institute of
Research and Biomedical Innovation (IRIB), PRES Normandy University, University of Rouen, 76821 Mont-Saint-Aignan Cedex, France
- North-West Cancéropole (CNO), 59008 Lille Cedex, France
| | - Anthony Romieu
- ICMUB,
UMR CNRS 6302, Université de Bourgogne, 9 Avenue Alain Savary, 21078 Dijon, France
- Institut Universitaire de France, 103 Boulevard Saint-Michel, 75005 Paris, France
| | - Norbert Lange
- Section
des Sciences Pharmaceutiques, Université de Genève, Université de Lausanne, Quai Ernest Ansermet 30, CH-1211 Genève 4, Switzerland
| | - Cyrille Sabot
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Pierre-Yves Renard
- Normandie Univ, COBRA, UMR 6014 & FR 3038; Univ Rouen; INSA Rouen; CNRS, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
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99
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Harmand TJR, Murar CE, Bode JW. New chemistries for chemoselective peptide ligations and the total synthesis of proteins. Curr Opin Chem Biol 2014; 22:115-21. [DOI: 10.1016/j.cbpa.2014.09.032] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2014] [Revised: 09/22/2014] [Accepted: 09/23/2014] [Indexed: 01/10/2023]
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100
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Schmidt P, Zhou L, Tishinov K, Zimmermann K, Gillingham D. Dialdehydes Lead to Exceptionally Fast Bioconjugations at Neutral pH by Virtue of a Cyclic Intermediate. Angew Chem Int Ed Engl 2014; 53:10928-31. [DOI: 10.1002/anie.201406132] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2014] [Revised: 07/18/2014] [Indexed: 01/17/2023]
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