51
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Zlatar M, Gruden M, Vassilyeva OY, Buvaylo EA, Ponomarev AN, Zvyagin SA, Wosnitza J, Krzystek J, Garcia-Fernandez P, Duboc C. Origin of the Zero-Field Splitting in Mononuclear Octahedral Mn(IV) Complexes: A Combined Experimental and Theoretical Investigation. Inorg Chem 2016; 55:1192-201. [PMID: 26745448 DOI: 10.1021/acs.inorgchem.5b02368] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The aim of this work was to determine and understand the origin of the electronic properties of Mn(IV) complexes, especially the zero-field splitting (ZFS), through a combined experimental and theoretical investigation on five well-characterized mononuclear octahedral Mn(IV) compounds, with various coordination spheres (N6, N3O3, N2O4 in both trans (trans-N2O4) and cis configurations (cis-N2O4) and O4S2). High-frequency and -field EPR (HFEPR) spectroscopy has been applied to determine the ZFS parameters of two of these compounds, MnL(trans-N2O4) and MnL(O4S2). While at X-band EPR, the axial-component of the ZFS tensor, D, was estimated to be +0.47 cm(-1) for MnL(O4S2), and a D-value of +2.289(5) cm(-1) was determined by HFEPR, which is the largest D-magnitude ever measured for a Mn(IV) complex. A moderate D value of -0.997(6) cm(-1) has been found for MnL(trans-N2O4). Quantum chemical calculations based on two theoretical frameworks (the Density Functional Theory based on a coupled perturbed approach (CP-DFT) and the hybrid Ligand-Field DFT (LF-DFT)) have been performed to define appropriate methodologies to calculate the ZFS tensor for Mn(IV) centers, to predict the orientation of the magnetic axes with respect to the molecular ones, and to define and quantify the physical origin of the different contributions to the ZFS. Except in the case of MnL(trans-N2O4), the experimental and calculated D values are in good agreement, and the sign of D is well predicted, LF-DFT being more satisfactory than CP-DFT. The calculations performed on MnL(cis-N2O4) are consistent with the orientation of the principal anisotropic axis determined by single-crystal EPR, validating the calculated ZFS tensor orientation. The different contributions to D were analyzed demonstrating that the d-d transitions mainly govern D in Mn(IV) ion. However, a deep analysis evidences that many factors enter into the game, explaining why no obvious magnetostructural correlations can be drawn in this series of Mn(IV) complexes.
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Affiliation(s)
- Matija Zlatar
- Center for Chemistry, Institute of Chemistry, Technology and Metallurgy, University of Belgrade , Njegoševa 12, P.O. Box 815, 11001 Belgrade, Serbia
| | - Maja Gruden
- Faculty of Chemistry, University of Belgrade , Studentski trg 12-16, 11001 Belgrade, Serbia
| | - Olga Yu Vassilyeva
- Department of Chemistry, Taras Shevchenko National University of Kyiv , 64/13 Volodymyrska str., Kyiv 01601, Ukraine
| | - Elena A Buvaylo
- Department of Chemistry, Taras Shevchenko National University of Kyiv , 64/13 Volodymyrska str., Kyiv 01601, Ukraine
| | - A N Ponomarev
- Dresden High Magnetic Field Laboratory (HLD-EMFL), Helmholtz-Zentrum Dresden-Rossendorf (HZDR), D-01328 Dresden, Saxony, Germany
| | - S A Zvyagin
- Dresden High Magnetic Field Laboratory (HLD-EMFL), Helmholtz-Zentrum Dresden-Rossendorf (HZDR), D-01328 Dresden, Saxony, Germany
| | - J Wosnitza
- Dresden High Magnetic Field Laboratory (HLD-EMFL), Helmholtz-Zentrum Dresden-Rossendorf (HZDR), D-01328 Dresden, Saxony, Germany.,Institut für Festkörperphysik, Technische Universität Dresden , D-01062 Dresden, Saxony, Germany
| | - J Krzystek
- National High Magnetic Field Laboratory (NHMFL), Florida State University , Tallahassee, Florida 32310, United States
| | - Pablo Garcia-Fernandez
- Departamento de Ciencias de la Tierra y Física de la Materia Condensada, Universidad de Cantabria , Avenida de los Castros s/n, 39005 Santander, Cantabria, Spain
| | - Carole Duboc
- Département de Chimie Moléculaire, Université Grenoble Alpes/CNRS, UMR-5250 , BP-53, 38041 Grenoble Cedex 9, France
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52
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Abstract
EPR spectroscopy combined with quantum chemistry for the investigation of the magnetic anisotropy of MnII, MnIII and MnIV.
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Affiliation(s)
- Carole Duboc
- University Grenoble-Alpes
- CNRS
- UMR 5250
- Département de Chimie Moléculaire
- 38041 Grenoble cedex 9
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53
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Realista S, Fitzpatrick AJ, Santos G, Ferreira LP, Barroso S, Pereira LCJ, Bandeira NAG, Neugebauer P, Hrubý J, Morgan GG, van Slageren J, Calhorda MJ, Martinho PN. A Mn(iii) single ion magnet with tridentate Schiff-base ligands. Dalton Trans 2016; 45:12301-7. [DOI: 10.1039/c6dt02538b] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Single ion magnet behaviour is reported for a mononuclear Mn(iii) ion with tridentate Schiff-base ligands revealing that the size of the axial anisotropy is the highest reported to date.
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54
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Brazzolotto D, Gennari M, Yu S, Pécaut J, Rouzières M, Clérac R, Orio M, Duboc C. An Experimental and Theoretical Investigation on Pentacoordinated Cobalt(III) Complexes with an Intermediate S=
1 Spin State: How Halide Ligands Affect their Magnetic Anisotropy. Chemistry 2015; 22:925-33. [DOI: 10.1002/chem.201502997] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2015] [Indexed: 11/06/2022]
Affiliation(s)
| | | | - Shengying Yu
- Univ. Grenoble Alpes, DCM, CNRS UMR 5250; 38000 Grenoble France
| | - Jacques Pécaut
- Univ. Grenoble Alpes, CEA, INAC-SCIB; 38000 Grenoble France
| | - Mathieu Rouzières
- CNRS, CRPP, UPR 8641; F-33600 Pessac France
- Univ. Bordeaux, CRPP, UPR 8641; F-33600 Pessac France
| | - Rodolphe Clérac
- CNRS, CRPP, UPR 8641; F-33600 Pessac France
- Univ. Bordeaux, CRPP, UPR 8641; F-33600 Pessac France
| | - Maylis Orio
- Aix Marseille Université, ISM2, CNRS UMR 7313; 13397 Marseille France
| | - Carole Duboc
- Univ. Grenoble Alpes, DCM, CNRS UMR 5250; 38000 Grenoble France
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55
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Dutta S, Deka RC. Zero field splitting in Mn (III) complexes: A comparative study of DFT base Coupled-Perturbed and Pederson–Khanna approaches. COMPUT THEOR CHEM 2015. [DOI: 10.1016/j.comptc.2015.08.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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56
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Vovna VV, Korochentsev VV, Komissarov AA, L'vov IB, Myshakina NS. Electronic structure and photoelectron spectra of nickel (II) acetylacetonate and its thio- and amino-substituted analogues. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.07.014] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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57
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Pascual-Álvarez A, Vallejo J, Pardo E, Julve M, Lloret F, Krzystek J, Armentano D, Wernsdorfer W, Cano J. Field-Induced Slow Magnetic Relaxation in a Mononuclear Manganese(III)-Porphyrin Complex. Chemistry 2015; 21:17299-307. [PMID: 26481722 DOI: 10.1002/chem.201502637] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2015] [Indexed: 11/07/2022]
Abstract
We report on a novel manganese(III)-porphyrin complex with the formula [Mn(III) (TPP)(3,5-Me2 pyNO)2 ]ClO4 ⋅CH3 CN (2; 3,5-Me2 pyNO=3,5-dimethylpyridine N-oxide, H2 TPP=5,10,15,20-tetraphenylporphyrin), in which the Mn(III) ion is six-coordinate with two monodentate 3,5-Me2 pyNO molecules and a tetradentate TPP ligand to build a tetragonally elongated octahedral geometry. The environment in 2 is responsible for the large and negative axial zero-field splitting (D=-3.8 cm(-1) ), low rhombicity (E/|D|=0.04) of the high-spin Mn(III) ion, and, ultimately, for the observation of slow magnetic-relaxation effects (Ea =15.5 cm(-1) at H=1000 G) in this rare example of a manganese-based single-ion magnet (SIM). Structural, magnetic, and electronic characterizations were carried out by means of single-crystal diffraction studies, variable-temperature direct- and alternating-current measurements and high-frequency and -field EPR spectroscopic analysis followed by quantum-chemical calculations. Slow magnetic-relaxation effects were also observed in the already known analogous compound [Mn(III) (TPP)Cl] (1; Ea =10.5 cm(-1) at H=1000 G). The results obtained for 1 and 2 are compared and discussed herein.
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Affiliation(s)
| | - Julia Vallejo
- Instituto de Ciencia Molecular (ICMOL), Universitat de València, Paterna 46980, València (Spain)
| | - Emilio Pardo
- Instituto de Ciencia Molecular (ICMOL), Universitat de València, Paterna 46980, València (Spain).
| | - Miguel Julve
- Instituto de Ciencia Molecular (ICMOL), Universitat de València, Paterna 46980, València (Spain)
| | - Francesc Lloret
- Instituto de Ciencia Molecular (ICMOL), Universitat de València, Paterna 46980, València (Spain)
| | - J Krzystek
- National High Magnetic Field Laboratory (NHMFL), Florida State University, Tallahassee, Florida 32310 (USA)
| | - Donatella Armentano
- Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Cosenza, 87036 (Italy)
| | - Wolfgang Wernsdorfer
- Institut Néel, CNRS, Nanoscience Department, BP 166, 380412 Grenoble Cedex 9 (France)
| | - Joan Cano
- Instituto de Ciencia Molecular (ICMOL), Universitat de València, Paterna 46980, València (Spain). .,Fundació General de la Universitat de València (FGUV), Universitat de València, Paterna 46980, València (Spain).
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58
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Escriche-Tur L, Corbella M, Font-Bardia M, Castro I, Bonneviot L, Albela B. Biomimetic Mn-Catalases Based on Dimeric Manganese Complexes in Mesoporous Silica for Potential Antioxidant Agent. Inorg Chem 2015; 54:10111-25. [DOI: 10.1021/acs.inorgchem.5b01425] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Luis Escriche-Tur
- Laboratoire de Chimie, ENS de Lyon, Université de Lyon, 46 Allée d’Italie, 69364 Lyon Cedex 07, France
| | | | | | - Isabel Castro
- Institut de Ciència Molecular, Universitat de València, C/Catedrático
José Beltrán 2, 46980 Paterna, Spain
| | - Laurent Bonneviot
- Laboratoire de Chimie, ENS de Lyon, Université de Lyon, 46 Allée d’Italie, 69364 Lyon Cedex 07, France
| | - Belén Albela
- Laboratoire de Chimie, ENS de Lyon, Université de Lyon, 46 Allée d’Italie, 69364 Lyon Cedex 07, France
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59
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Wijeratne GB, Zolnhofer EM, Fortier S, Grant LN, Carroll PJ, Chen CH, Meyer K, Krzystek J, Ozarowski A, Jackson TA, Mindiola DJ, Telser J. Electronic Structure and Reactivity of a Well-Defined Mononuclear Complex of Ti(II). Inorg Chem 2015; 54:10380-97. [DOI: 10.1021/acs.inorgchem.5b01796] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Gayan B. Wijeratne
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
| | - Eva M. Zolnhofer
- Inorganic Chemistry, Department of Chemistry
and Pharmacy, Friedrich-Alexander University Erlangen-Nürnberg, 91058 Erlangen, Germany
| | - Skye Fortier
- Department of Chemistry and Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
| | - Lauren N. Grant
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Patrick J. Carroll
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Chun-Hsing Chen
- Department of Chemistry and Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
| | - Karsten Meyer
- Inorganic Chemistry, Department of Chemistry
and Pharmacy, Friedrich-Alexander University Erlangen-Nürnberg, 91058 Erlangen, Germany
| | - J. Krzystek
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - Andrew Ozarowski
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - Timothy A. Jackson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
| | - Daniel J. Mindiola
- Department of Chemistry and Molecular Structure Center, Indiana University, Bloomington, Indiana 47405, United States
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States
| | - Joshua Telser
- Department of
Biological, Chemical and Physical Sciences, Roosevelt University, Chicago, Illinois 60605, United States
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60
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Krzystek J, Telser J, Li J, Subramanian MA. Magnetic Properties and Electronic Structure of Manganese-Based Blue Pigments: A High-Frequency and -Field EPR Study. Inorg Chem 2015; 54:9040-5. [DOI: 10.1021/acs.inorgchem.5b01306] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- J. Krzystek
- National
High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - Joshua Telser
- Department
of Biological, Chemical, and Physical Sciences, Roosevelt University, Chicago, Illinois 60605, United States
| | - Jun Li
- Department
of Chemistry, Oregon State University, Corvallis, Oregon 97331, United States
| | - M. A. Subramanian
- Department
of Chemistry, Oregon State University, Corvallis, Oregon 97331, United States
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61
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Sundararajan M, Neese F. Distal Histidine Modulates the Unusual O-Binding of Nitrite to Myoglobin: Evidence from the Quantum Chemical Analysis of EPR Parameters. Inorg Chem 2015; 54:7209-17. [DOI: 10.1021/acs.inorgchem.5b00557] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Mahesh Sundararajan
- Theoretical Chemistry
Section, Bhabha Atomic Research Centre, Mumbai 400 085, India
| | - Frank Neese
- Max-Planck-Institut für Chemische Energiekonversion, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
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62
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Saad A, Zhu W, Rousseau G, Mialane P, Marrot J, Haouas M, Taulelle F, Dessapt R, Serier-Brault H, Rivière E, Kubo T, Oldfield E, Dolbecq A. Polyoxomolybdate Bisphosphonate Heterometallic Complexes: Synthesis, Structure, and Activity on a Breast Cancer Cell Line. Chemistry 2015; 21:10537-47. [DOI: 10.1002/chem.201406565] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2014] [Revised: 03/12/2015] [Indexed: 01/15/2023]
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63
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Cazacu M, Shova S, Soroceanu A, Machata P, Bucinsky L, Breza M, Rapta P, Telser J, Krzystek J, Arion VB. Charge and Spin States in Schiff Base Metal Complexes with a Disiloxane Unit Exhibiting a Strong Noninnocent Ligand Character: Synthesis, Structure, Spectroelectrochemistry, and Theoretical Calculations. Inorg Chem 2015; 54:5691-706. [DOI: 10.1021/acs.inorgchem.5b00229] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Maria Cazacu
- “Petru Poni” Institute of Macromolecular Chemistry, Alea Gr. Ghica Voda 41A, 700487 Iasi, Romania
| | - Sergiu Shova
- “Petru Poni” Institute of Macromolecular Chemistry, Alea Gr. Ghica Voda 41A, 700487 Iasi, Romania
| | - Alina Soroceanu
- “Petru Poni” Institute of Macromolecular Chemistry, Alea Gr. Ghica Voda 41A, 700487 Iasi, Romania
| | - Peter Machata
- Institute of Physical Chemistry and Chemical Physics, Faculty of
Chemical and Food Technology, Slovak University of Technology, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Lukas Bucinsky
- Institute of Physical Chemistry and Chemical Physics, Faculty of
Chemical and Food Technology, Slovak University of Technology, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Martin Breza
- Institute of Physical Chemistry and Chemical Physics, Faculty of
Chemical and Food Technology, Slovak University of Technology, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Peter Rapta
- Institute of Physical Chemistry and Chemical Physics, Faculty of
Chemical and Food Technology, Slovak University of Technology, Radlinského
9, SK-81237 Bratislava, Slovak Republic
| | - Joshua Telser
- Department of Biological, Chemical and
Physical Sciences, Roosevelt University, 430 South Michigan Avenue, Chicago, Illinois 60605 United States
| | - J. Krzystek
- National
High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310 United States
| | - Vladimir B. Arion
- Faculty of Chemistry, Institute of Inorganic
Chemistry, University of Vienna, Währinger Strasse 42, A-1090 Vienna, Austria
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64
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First principles approach to the electronic structure, magnetic anisotropy and spin relaxation in mononuclear 3d-transition metal single molecule magnets. Coord Chem Rev 2015. [DOI: 10.1016/j.ccr.2014.10.015] [Citation(s) in RCA: 225] [Impact Index Per Article: 25.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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65
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Khan S, Kubica-Misztal A, Kruk D, Kowalewski J, Odelius M. Systematic theoretical investigation of the zero-field splitting in Gd(III) complexes: Wave function and density functional approaches. J Chem Phys 2015; 142:034304. [DOI: 10.1063/1.4905559] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Affiliation(s)
- Shehryar Khan
- Department of Physics, Stockholm University, AlbaNova University Center, S-106 91 Stockholm, Sweden
| | | | - Danuta Kruk
- Faculty of Mathematics and Computer Science, University of Warmia and Mazury in Olsztyn, Sloneczna 54, Olsztyn PL-10710, Poland
| | - Jozef Kowalewski
- Department of Materials and Environmental Chemistry, Arrhenius Laboratory, Stockholm University, S-106 91 Stockholm, Sweden
| | - Michael Odelius
- Department of Physics, Stockholm University, AlbaNova University Center, S-106 91 Stockholm, Sweden
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66
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Perić M, García-Fuente A, Zlatar M, Daul C, Stepanović S, García-Fernández P, Gruden-Pavlović M. Magnetic Anisotropy in “Scorpionate” First-Row Transition-Metal Complexes: A Theoretical Investigation. Chemistry 2015; 21:3716-26. [DOI: 10.1002/chem.201405480] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2014] [Indexed: 11/12/2022]
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67
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Zhang YQ, Luo CL. Origin of the relaxation barriers in a family of MReIV(CN)2 single-chain magnets (M = MnII, NiII, and CoII): a theoretical investigation. NEW J CHEM 2015. [DOI: 10.1039/c4nj01491j] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Theoretical exploration of the Δξ and ΔA in terms of D, J, and S in three MReIV(CN)2 single-chain magnets.
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Affiliation(s)
- Yi-Quan Zhang
- Jiangsu Key Laboratory for NSLSCS
- School of Physical Science and Technology
- Nanjing Normal University
- Nanjing 210023
- P. R. China
| | - Cheng-Lin Luo
- Jiangsu Key Laboratory for NSLSCS
- School of Physical Science and Technology
- Nanjing Normal University
- Nanjing 210023
- P. R. China
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68
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Gerey B, Gennari M, Gouré E, Pécaut J, Blackman A, Pantazis DA, Neese F, Molton F, Fortage J, Duboc C, Collomb MN. Calcium and heterometallic manganese–calcium complexes supported by tripodal pyridine-carboxylate ligands: structural, EPR and theoretical investigations. Dalton Trans 2015; 44:12757-70. [DOI: 10.1039/c5dt01776a] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Rare examples of heteronuclear μ-carboxylato bridged Mn–Ca complexes are reported.
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Affiliation(s)
- Bertrand Gerey
- Univ. Grenoble Alpes
- F-38000 Grenoble
- France
- CNRS
- F-38000 Grenoble
| | | | - Eric Gouré
- Univ. Grenoble Alpes
- F-38000 Grenoble
- France
- CNRS
- F-38000 Grenoble
| | | | - Allan Blackman
- School of Applied Sciences
- Auckland University of Technology
- Auckland 1142
- New Zealand
| | - Dimitrios A. Pantazis
- Max-Planck-Institut für Chemische Energie Konversion
- D-45470 Mülheim an der Ruhr
- Germany
| | - Frank Neese
- Max-Planck-Institut für Chemische Energie Konversion
- D-45470 Mülheim an der Ruhr
- Germany
| | - Florian Molton
- Univ. Grenoble Alpes
- F-38000 Grenoble
- France
- CNRS
- F-38000 Grenoble
| | - Jérôme Fortage
- Univ. Grenoble Alpes
- F-38000 Grenoble
- France
- CNRS
- F-38000 Grenoble
| | - Carole Duboc
- Univ. Grenoble Alpes
- F-38000 Grenoble
- France
- CNRS
- F-38000 Grenoble
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69
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Duros V, Sartzi H, Teat SJ, Sanakis Y, Roubeau O, Perlepes SP. Tris{2,4-bis(2-pyridyl)-1,3,5-triazapentanedienato}manganese(III), a complex derived from a unique metal ion-assisted transformation of pyridine-2-amidoxime. INORG CHEM COMMUN 2014. [DOI: 10.1016/j.inoche.2014.10.017] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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70
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Retegan M, Cox N, Pantazis DA, Neese F. A first-principles approach to the calculation of the on-site zero-field splitting in polynuclear transition metal complexes. Inorg Chem 2014; 53:11785-93. [PMID: 25340874 DOI: 10.1021/ic502081c] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The interpretation of electron paramagnetic resonance spectra of polynuclear transition metal complexes in terms of individual contributions from each paramagnetic center can be greatly facilitated by the availability of theoretical methods that enable the reliable prediction of local spectroscopic parameters. In this work we report an approach that enables the application of multireference ab initio methods for the calculation of local zero field splitting tensors, one of the leading terms in the spin Hamiltonian for exchange-coupled systems of high nuclearity. The method referred to as local complete active space configuration interaction (L-CASCI) represents a multireference calculation with an active space composed of local orbitals of the center of interest. By successive permutation of the active space to include the localized orbitals corresponding to a particular center of the complex, all on-site parameters can be easily obtained at a high-level of theory with a corresponding low computational cost. Benchmark calculations on synthetic complexes confirm the validity of the approach. As an example of the applicability of the L-CASCI method to large systems, we determine the local anisotropy of the Mn(III) ion of the tetranuclear manganese cluster of photosystem II in both structural forms of its S2 state.
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Affiliation(s)
- Marius Retegan
- Max Planck Institute for Chemical Energy Conversion , Stiftstr. 34-38, 45470 Mülheim an der Ruhr, Germany
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71
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Singh SK, Gupta T, Badkur P, Rajaraman G. Magnetic anisotropy of mononuclear Ni(II) complexes: on the importance of structural diversity and the structural distortions. Chemistry 2014; 20:10305-13. [PMID: 25042299 DOI: 10.1002/chem.201402694] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2014] [Indexed: 11/06/2022]
Abstract
Mononuclear Ni(II) complexes are particularly attractive in the area of single-molecule magnets as the axial zero-field splitting (D) for the Ni(II) complexes is in the range of -200 to +200 cm(-1) . Despite this advantage, very little is known on the origin of anisotropy across various coordination ligands, coordination numbers, and particularly what factors influence the D parameter in these complexes. To answer some of these questions, herein we have undertaken a detailed study of a series of mononuclear Ni(II) complexes with ab initio calculations. Our results demonstrate that three prominent spin-conserved low-lying d-d transitions contribute significantly to the D value. Variation in the sign and the magnitude of D values are found to correlate to the specific structural distortions. Apart from the metal-ligand bond lengths, two different parameters, namely, Δα and Δβ, which are correlated to the cis angles present in the coordination environment, are found to significantly influence the axial D values. Developed magneto-structural D correlations suggest that the D values can be enhanced significantly by fine tuning the structural distortion in the coordination environment. Calculations performed on a series of Ni(II) models with coordination numbers two to six unfold an interesting observation-the D parameter increases significantly upon a reduction in coordination number compared with a reference octahedral coordination. Besides, if high symmetry is maintained, even larger coordination numbers yield large D values.
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Affiliation(s)
- Saurabh Kumar Singh
- Department of Chemistry, Indian Institute of Technology Bombay, Powai,Mumbai,Maharashtra,India-400 076, Fax: (+91) 22-2576-7152
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72
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High-frequency and high-field electron paramagnetic resonance (HFEPR): a new spectroscopic tool for bioinorganic chemistry. J Biol Inorg Chem 2014; 19:297-318. [DOI: 10.1007/s00775-013-1084-3] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2013] [Accepted: 12/27/2013] [Indexed: 12/27/2022]
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73
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Campomanes P, Kellett WF, Easthon LM, Ozarowski A, Allen KN, Angerhofer A, Rothlisberger U, Richards NGJ. Assigning the EPR fine structure parameters of the Mn(II) centers in Bacillus subtilis oxalate decarboxylase by site-directed mutagenesis and DFT/MM calculations. J Am Chem Soc 2014; 136:2313-23. [PMID: 24444454 PMCID: PMC4004257 DOI: 10.1021/ja408138f] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Oxalate decarboxylase (OxDC) catalyzes the Mn-dependent conversion of the oxalate monoanion into CO2 and formate. EPR-based strategies for investigating the catalytic mechanism of decarboxylation are complicated by the difficulty of assigning the signals associated with the two Mn(II) centers located in the N- and C-terminal cupin domains of the enzyme. We now report a mutational strategy that has established the assignment of EPR fine structure parameters to each of these Mn(II) centers at pH 8.5. These experimental findings are also used to assess the performance of a multistep strategy for calculating the zero-field splitting parameters of protein-bound Mn(II) ions. Despite the known sensitivity of calculated D and E values to the computational approach, we demonstrate that good estimates of these parameters can be obtained using cluster models taken from carefully optimized DFT/MM structures. Overall, our results provide new insights into the strengths and limitations of theoretical methods for understanding electronic properties of protein-bound Mn(II) ions, thereby setting the stage for future EPR studies on the electronic properties of the Mn(II) centers in OxDC and site-specific variants.
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Affiliation(s)
- Pablo Campomanes
- Laboratory of Computational Chemistry and Biochemistry, Ecole Polytechnique Fédérale de Lausanne , CH-1015 Lausanne, Switzerland
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74
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Sanz S, Frost JM, Rajeshkumar T, Dalgarno SJ, Rajaraman G, Wernsdorfer W, Schnack J, Lusby PJ, Brechin EK. Combining Complementary Ligands into one Framework for the Construction of a Ferromagnetically Coupled [MnIII12] Wheel. Chemistry 2014; 20:3010-3. [DOI: 10.1002/chem.201304740] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Indexed: 11/08/2022]
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75
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Singh SK, Rajaraman G. Can anisotropic exchange be reliably calculated using density functional methods? A case study on trinuclear Mn(III)-M(III)-Mn(III) (M=Fe, Ru, and Os) cyanometalate single-molecule magnets. Chemistry 2013; 20:113-23. [PMID: 24288194 DOI: 10.1002/chem.201303489] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2013] [Indexed: 11/05/2022]
Abstract
Density functional studies have been performed on a set of trinuclear single-molecule magnets (SMMs) of general formula [{Mn2(5-Br salen)2(MeOH)2}M(CN)6](NEt4) (M=Fe(III) (1), Ru(III) (2) and Os(III) (3); 5-Brsalen=N,N'-ethylenebis(5-bromosalicylidene)iminato anion). We have computed the orbital-dependent exchange interaction for all three complexes for the first time using DFT and complete active space self-consistent field (CASSCF) methods. DFT calculations yield the anisotropic exchange as J(ξξ)=3.5 cm(-1) for 1; J(ξξ)=12.1 cm(-1), J(ζζ)=-6.9 cm(-1) and J(ηη)=-14 cm(-1) for 2; and J(ξξ)=23.7 cm(-1) and J(ζζ) =-11.1 cm(-1) for 3. The computed values are in agreement with the experimental report, and this suggests that the established methodology can be used to compute the anisotropic exchange in larger clusters. Our calculations reiterate the fact that the exchange is described by a three-axis anisotropic exchange for complexes 2 and 3 as evidenced by the experiments. A stronger exchange coupling as we move down the periodic table from 3d to 5d is reproduced by our calculations, and the origin of this enhancement in the exchange interaction has been probed by using molecular orbital analysis. The electronic origin of different types of exchange observed in this series is found to be related to the energy difference between possible degenerate pairs and the nature of orbital interactions. By computing the exchange interaction, the single-ion anisotropy of Mn(III) and zero-field splitting of the S=9/2 ground state of complexes 1-3 using CASSCF and/or DFT methods, we have attempted to shed light on the issue of anisotropic exchange and the barrier height for the magnetisation reversal in SMMs. Comprehensive magneto-structural correlations have been developed to offer clues on how to further enhance the barrier height in this class of SMMs.
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Affiliation(s)
- Saurabh Kumar Singh
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai-400076 (India), Fax: +91-(0)22-2576-7152
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76
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Vallejo J, Pascual-Álvarez A, Cano J, Castro I, Julve M, Lloret F, Krzystek J, De Munno G, Armentano D, Wernsdorfer W, Ruiz-García R, Pardo E. Field-Induced Hysteresis and Quantum Tunneling of the Magnetization in a Mononuclear Manganese(III) Complex. Angew Chem Int Ed Engl 2013; 52:14075-9. [DOI: 10.1002/anie.201308047] [Citation(s) in RCA: 144] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2013] [Indexed: 11/08/2022]
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77
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Vallejo J, Pascual-Álvarez A, Cano J, Castro I, Julve M, Lloret F, Krzystek J, De Munno G, Armentano D, Wernsdorfer W, Ruiz-García R, Pardo E. Field-Induced Hysteresis and Quantum Tunneling of the Magnetization in a Mononuclear Manganese(III) Complex. Angew Chem Int Ed Engl 2013. [DOI: 10.1002/ange.201308047] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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78
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A theoretical study on magnetic properties of bis-TEMPO diradicals with possible application. COMPUT THEOR CHEM 2013. [DOI: 10.1016/j.comptc.2013.09.013] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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79
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Malrieu JP, Caballol R, Calzado CJ, de Graaf C, Guihéry N. Magnetic interactions in molecules and highly correlated materials: physical content, analytical derivation, and rigorous extraction of magnetic Hamiltonians. Chem Rev 2013; 114:429-92. [PMID: 24102410 DOI: 10.1021/cr300500z] [Citation(s) in RCA: 282] [Impact Index Per Article: 25.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Jean Paul Malrieu
- Laboratoire de Chimie et Physique Quantiques, Université de Toulouse 3 , 118 route de Narbonne, 31062 Toulouse, France
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80
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Martínez-Lillo J, Mastropietro TF, Lhotel E, Paulsen C, Cano J, De Munno G, Faus J, Lloret F, Julve M, Nellutla S, Krzystek J. Highly Anisotropic Rhenium(IV) Complexes: New Examples of Mononuclear Single-Molecule Magnets. J Am Chem Soc 2013; 135:13737-48. [DOI: 10.1021/ja403154z] [Citation(s) in RCA: 91] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- José Martínez-Lillo
- Departament
de Química Inorgànica/Instituto de Ciencia Molecular
(ICMol), Universitat de València, C/Catedrático José
Beltrán 2, 46980 Paterna (València), Spain
| | - Teresa F. Mastropietro
- Centro
di Eccellenza CEMIF.CAL, Dipartimento di Chimica, Università della Calabria, 87030 Arcavacata di Rende, Cosenza, Italy
| | - Elsa Lhotel
- Institut Néel-CNRS, BP
166, 25 Avenue des Martyrs, 38042 Grenoble Cedex 9, France
| | - Carley Paulsen
- Institut Néel-CNRS, BP
166, 25 Avenue des Martyrs, 38042 Grenoble Cedex 9, France
| | - Joan Cano
- Departament
de Química Inorgànica/Instituto de Ciencia Molecular
(ICMol), Universitat de València, C/Catedrático José
Beltrán 2, 46980 Paterna (València), Spain
- Fundació
General de la Universitat de València (FGUV), Universitat de València, 46010 València, Spain
| | - Giovanni De Munno
- Centro
di Eccellenza CEMIF.CAL, Dipartimento di Chimica, Università della Calabria, 87030 Arcavacata di Rende, Cosenza, Italy
| | - Juan Faus
- Departament
de Química Inorgànica/Instituto de Ciencia Molecular
(ICMol), Universitat de València, C/Catedrático José
Beltrán 2, 46980 Paterna (València), Spain
| | - Francesc Lloret
- Departament
de Química Inorgànica/Instituto de Ciencia Molecular
(ICMol), Universitat de València, C/Catedrático José
Beltrán 2, 46980 Paterna (València), Spain
| | - Miguel Julve
- Departament
de Química Inorgànica/Instituto de Ciencia Molecular
(ICMol), Universitat de València, C/Catedrático José
Beltrán 2, 46980 Paterna (València), Spain
| | - Saritha Nellutla
- National
High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
| | - J. Krzystek
- National
High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida 32310, United States
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81
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Maurice R, Verma P, Zadrozny JM, Luo S, Borycz J, Long JR, Truhlar DG, Gagliardi L. Single-Ion Magnetic Anisotropy and Isotropic Magnetic Couplings in the Metal–Organic Framework Fe2(dobdc). Inorg Chem 2013; 52:9379-89. [DOI: 10.1021/ic400953e] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Rémi Maurice
- Department of Chemistry, Supercomputing Institute, and Chemical Theory
Center, University of Minnesota, Minneapolis,
Minnesota 55455, United States
| | - Pragya Verma
- Department of Chemistry, Supercomputing Institute, and Chemical Theory
Center, University of Minnesota, Minneapolis,
Minnesota 55455, United States
| | - Joseph M. Zadrozny
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Sijie Luo
- Department of Chemistry, Supercomputing Institute, and Chemical Theory
Center, University of Minnesota, Minneapolis,
Minnesota 55455, United States
| | - Joshua Borycz
- Department of Chemistry, Supercomputing Institute, and Chemical Theory
Center, University of Minnesota, Minneapolis,
Minnesota 55455, United States
| | - Jeffrey R. Long
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Donald G. Truhlar
- Department of Chemistry, Supercomputing Institute, and Chemical Theory
Center, University of Minnesota, Minneapolis,
Minnesota 55455, United States
| | - Laura Gagliardi
- Department of Chemistry, Supercomputing Institute, and Chemical Theory
Center, University of Minnesota, Minneapolis,
Minnesota 55455, United States
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82
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Krickemeyer E, Kaiser Y, Stammler A, Bögge H, Glaser T. Synthesis, Structural, Spectroscopic, Electrochemical, Magnetic, and Catalytic Properties of the Trinuclear MnIIITriplesalen Complex [(talen t-Bu 2){Mn(OAc)}3] Exhibiting Three Salen-Subunits in a β-cis-Conformation. Z Anorg Allg Chem 2013. [DOI: 10.1002/zaac.201300129] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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83
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Schweinfurth D, Krzystek J, Schapiro I, Demeshko S, Klein J, Telser J, Ozarowski A, Su CY, Meyer F, Atanasov M, Neese F, Sarkar B. Electronic Structures of Octahedral Ni(II) Complexes with “Click” Derived Triazole Ligands: A Combined Structural, Magnetometric, Spectroscopic, and Theoretical Study. Inorg Chem 2013; 52:6880-92. [DOI: 10.1021/ic3026123] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- David Schweinfurth
- Institut für Chemie und Biochemie, Freie Universität
Berlin, Fabeckstraße 34-36, D-14195 Berlin, Germany
| | - J. Krzystek
- National High Magnetic Field Laboratory,
Florida State University, Tallahassee, Florida 32310, United States
| | - Igor Schapiro
- Max Planck Institute for Chemical
Energy Conversion, Stiftstraße 34-36, D-45470 Mülheim
an der Ruhr, Germany
| | - Serhiy Demeshko
- Institut
für Anorganische Chemie, Georg-August Universität Göttingen,
Tammanstraße 4, D-37077 Göttingen, Germany
| | - Johannes Klein
- Institut für Anorganische Chemie,
Universität Stuttgart, Pfaffenwaldring 55, D-70569 Stuttgart,
Germany
| | - Joshua Telser
- Department of Biological,
Chemical and Physical Sciences, Roosevelt University, Chicago, Illinois
60605, United States
| | - Andrew Ozarowski
- National High Magnetic Field Laboratory,
Florida State University, Tallahassee, Florida 32310, United States
| | - Cheng-Yong Su
- Lehn
Institute of Functional Materials, School of Chemistry and Chemical
Engineering, Sun Yat-Sen University, Guangzhou 510275, China
| | - Franc Meyer
- Institut
für Anorganische Chemie, Georg-August Universität Göttingen,
Tammanstraße 4, D-37077 Göttingen, Germany
| | - Mihail Atanasov
- Max Planck Institute for Chemical
Energy Conversion, Stiftstraße 34-36, D-45470 Mülheim
an der Ruhr, Germany
- Institute of General and Inorganic Chemistry,
Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
| | - Frank Neese
- Max Planck Institute for Chemical
Energy Conversion, Stiftstraße 34-36, D-45470 Mülheim
an der Ruhr, Germany
| | - Biprajit Sarkar
- Institut für Chemie und Biochemie, Freie Universität
Berlin, Fabeckstraße 34-36, D-14195 Berlin, Germany
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84
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Kubica A, Kowalewski J, Kruk D, Odelius M. Zero-field splitting in nickel(II) complexes: A comparison of DFT and multi-configurational wavefunction calculations. J Chem Phys 2013; 138:064304. [DOI: 10.1063/1.4790167] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
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85
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Yoshizawa T, Sakaki S. NMR shielding constants of CuX, AgX, and AuX (X = F, Cl, Br, and I) investigated by density functional theory based on the Douglas-Kroll-Hess Hamiltonian. J Comput Chem 2013; 34:1013-23. [DOI: 10.1002/jcc.23224] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2012] [Revised: 12/11/2012] [Accepted: 12/13/2012] [Indexed: 11/11/2022]
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86
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Hayden JA, Brophy MB, Cunden LS, Nolan EM. High-affinity manganese coordination by human calprotectin is calcium-dependent and requires the histidine-rich site formed at the dimer interface. J Am Chem Soc 2013; 135:775-87. [PMID: 23276281 PMCID: PMC3575579 DOI: 10.1021/ja3096416] [Citation(s) in RCA: 109] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Calprotectin (CP) is a transition metal-chelating antimicrobial protein of the calcium-binding S100 family that is produced and released by neutrophils. It inhibits the growth of various pathogenic microorganisms by sequestering the transition metal ions manganese and zinc. In this work, we investigate the manganese-binding properties of CP. We demonstrate that the unusual His(4) motif (site 2) formed at the S100A8/S100A9 dimer interface is the site of high-affinity Mn(II) coordination. We identify a low-temperature Mn(II) spectroscopic signal for this site consistent with an octahedral Mn(II) coordination sphere with simulated zero-field splitting parameters D = 270 MHz and E/D = 0.30 (E = 81 MHz). This analysis, combined with studies of mutant proteins, suggests that four histidine residues (H17 and H27 of S100A8; H91 and H95 of S100A9) coordinate Mn(II) in addition to two as-yet unidentified ligands. The His(3)Asp motif (site 1), which is also formed at the S100A8/S100A9 dimer interface, does not provide a high-affinity Mn(II) binding site. Calcium binding to the EF-hand domains of CP increases the Mn(II) affinity of the His(4) site from the low-micromolar to the mid-nanomolar range. Metal-ion selectivity studies demonstrate that CP prefers to coordinate Zn(II) over Mn(II). Nevertheless, the specificity of Mn(II) for the His(4) site provides CP with the propensity to form mixed Zn:Mn:CP complexes where one Zn(II) ion occupies site 1 and one Mn(II) ion occupies site 2. These studies support the notion that CP responds to physiological calcium ion gradients to become a high-affinity transition metal ion chelator in the extracellular space where it inhibits microbial growth.
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Affiliation(s)
- Joshua A. Hayden
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139
| | - Megan Brunjes Brophy
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139
| | - Lisa S. Cunden
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139
| | - Elizabeth M. Nolan
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, MA 02139
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87
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Maurice R, Graaf CD, Guihéry N. Theoretical determination of spin Hamiltonians with isotropic and anisotropic magnetic interactions in transition metal and lanthanide complexes. Phys Chem Chem Phys 2013; 15:18784-804. [DOI: 10.1039/c3cp52521j] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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88
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Berg N, Hooper TN, Liu J, Beedle CC, Singh SK, Rajaraman G, Piligkos S, Hill S, Brechin EK, Jones LF. Synthetic, structural, spectroscopic and theoretical study of a Mn(iii)–Cu(ii) dimer containing a Jahn–Teller compressed Mn ion. Dalton Trans 2013; 42:207-16. [DOI: 10.1039/c2dt31995k] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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89
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Retegan M, Collomb MN, Neese F, Duboc C. A combined high-field EPR and quantum chemical study on a weakly ferromagnetically coupled dinuclear Mn(iii) complex. A complete analysis of the EPR spectrum beyond the strong coupling limit. Phys Chem Chem Phys 2013; 15:223-34. [DOI: 10.1039/c2cp42955a] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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90
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Forshaw AP, Smith JM, Ozarowski A, Krzystek J, Smirnov D, Zvyagin SA, Harris TD, Karunadasa HI, Zadrozny JM, Schnegg A, Holldack K, Jackson TA, Alamiri A, Barnes DM, Telser J. Low-Spin Hexacoordinate Mn(III): Synthesis and Spectroscopic Investigation of Homoleptic Tris(pyrazolyl)borate and Tris(carbene)borate Complexes. Inorg Chem 2012; 52:144-59. [DOI: 10.1021/ic301630d] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Adam P. Forshaw
- Department of Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United
States
| | - Jeremy M. Smith
- Department of Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, United
States
| | - Andrew Ozarowski
- National High Magnetic
Field Laboratory (NHMFL), Florida State University, Tallahassee, Florida 32310, United States
| | - J. Krzystek
- National High Magnetic
Field Laboratory (NHMFL), Florida State University, Tallahassee, Florida 32310, United States
| | - Dmitry Smirnov
- National High Magnetic
Field Laboratory (NHMFL), Florida State University, Tallahassee, Florida 32310, United States
| | - S. A. Zvyagin
- Dresden High Magnetic Field Laboratory (HLD), Helmholtz-Zentrum Dresden-Rossendorf, D-01314
Dresden, Germany
| | - T. David Harris
- Department
of Chemistry, Northwestern University,
Evanston, Illinois 60208, United States
| | | | - Joseph M. Zadrozny
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Alexander Schnegg
- Helmholtz-Zentrum für Materialien
und Energie, Institut für Silizium-Photovoltaik, D-12489 Berlin, Germany
| | - Karsten Holldack
- Helmholtz-Zentrum für Materialien und Energie, Institut für Methoden und Instrumente der Forschung mit Synchrotronstrahlung, D-12489 Berlin, Germany
| | - Timothy A. Jackson
- Department of Chemistry, University of Kansas, Lawrence, Kansas 66045, United States
| | - Ahmad Alamiri
- Department of Biological, Chemical and Physical Sciences, Roosevelt University, Chicago, Illinois 60605, United
States
| | - Diane M. Barnes
- Department of Biological, Chemical and Physical Sciences, Roosevelt University, Chicago, Illinois 60605, United
States
| | - Joshua Telser
- Department of Biological, Chemical and Physical Sciences, Roosevelt University, Chicago, Illinois 60605, United
States
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91
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McLaughlin MP, Retegan M, Bill E, Payne TM, Shafaat HS, Peña S, Sudhamsu J, Ensign AA, Crane BR, Neese F, Holland PL. Azurin as a protein scaffold for a low-coordinate nonheme iron site with a small-molecule binding pocket. J Am Chem Soc 2012; 134:19746-57. [PMID: 23167247 PMCID: PMC3515693 DOI: 10.1021/ja308346b] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
The apoprotein of Pseudomonas aeruginosa azurin binds iron(II) to give a 1:1 complex, which has been characterized by electronic absorption, Mössbauer, and NMR spectroscopies, as well as X-ray crystallography and quantum-chemical computations. Despite potential competition by water and other coordinating residues, iron(II) binds tightly to the low-coordinate site. The iron(II) complex does not react with chemical redox agents to undergo oxidation or reduction. Spectroscopically calibrated quantum-chemical computations show that the complex has high-spin iron(II) in a pseudotetrahedral coordination environment, which features interactions with side chains of two histidines and a cysteine as well as the C═O of Gly45. In the (5)A(1) ground state, the d(z(2)) orbital is doubly occupied. Mutation of Met121 to Ala leaves the metal site in a similar environment but creates a pocket for reversible binding of small anions to the iron(II) center. Specifically, azide forms a high-spin iron(II) complex and cyanide forms a low-spin iron(II) complex.
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Affiliation(s)
| | - Marius Retegan
- Max Planck Institute for Chemical Energy Conversion, Mülheim an der Ruhr, Germany
| | - Eckhard Bill
- Max Planck Institute for Chemical Energy Conversion, Mülheim an der Ruhr, Germany
| | - Thomas M. Payne
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853
| | - Hannah S. Shafaat
- Max Planck Institute for Chemical Energy Conversion, Mülheim an der Ruhr, Germany
| | - Salvador Peña
- Department of Chemistry, University of Rochester, Rochester, New York 14618
| | - Jawahar Sudhamsu
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853
| | - Amy A. Ensign
- Department of Chemistry, University of Rochester, Rochester, New York 14618
| | - Brian R. Crane
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York 14853
| | - Frank Neese
- Max Planck Institute for Chemical Energy Conversion, Mülheim an der Ruhr, Germany
| | - Patrick L. Holland
- Department of Chemistry, University of Rochester, Rochester, New York 14618
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92
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Ruamps R, Batchelor LJ, Maurice R, Gogoi N, Jiménez-Lozano P, Guihéry N, de Graaf C, Barra AL, Sutter JP, Mallah T. Origin of the magnetic anisotropy in heptacoordinate Ni(II) and Co(II) complexes. Chemistry 2012. [PMID: 23180690 DOI: 10.1002/chem.201202492] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The nature and magnitude of the magnetic anisotropy of heptacoordinate mononuclear Ni(II) and Co(II) complexes were investigated by a combination of experiment and ab initio calculations. The zero-field splitting (ZFS) parameters D of [Ni(H(2)DAPBH)(H(2)O)(2)](NO(3))(2)⋅2 H(2)O (1) and [Co(H(2)DAPBH)(H(2)O)(NO(3))](NO(3)) [2; H(2)DAPBH = 2,6-diacetylpyridine bis- (benzoyl hydrazone)] were determined by means of magnetization measurements and high-field high-frequency EPR spectroscopy. The negative D value, and hence an easy axis of magnetization, found for the Ni(II) complex indicates stabilization of the highest M(S) value of the S = 1 ground spin state, while a large and positive D value, and hence an easy plane of magnetization, found for Co(II) indicates stabilization of the M(S) = ±1/2 sublevels of the S = 3/2 spin state. Ab initio calculations were performed to rationalize the magnitude and the sign of D, by elucidating the chemical parameters that govern the magnitude of the anisotropy in these complexes. The negative D value for the Ni(II) complex is due largely to a first excited triplet state that is close in energy to the ground state. This relatively small energy gap between the ground and the first excited state is the result of a small energy difference between the d(xy) and d(x(2)-y(2)) orbitals owing to the pseudo-pentagonal-bipyramidal symmetry of the complex. For Co(II), all of the excited states contribute to a positive D value, which accounts for the large magnitude of the anisotropy for this complex.
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Affiliation(s)
- Renaud Ruamps
- Laboratoire de Chimie et Physique Quantiques, Université de Toulouse III, 118, route de Narbonne, 31062 Toulouse, France
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93
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Misochko EY, Akimov AV, Masitov AA, Korchagin DV, Aldoshin SM, Boganov SE, Shavrin KN, Gvozdev VD, Egorov MP, Nefedov OM. The electronic structure of 5-methylhexa-1,2,4-triene-1,3-diyl, the first representative of highly delocalized triplet ethynylvinylcarbenes, from ESR spectroscopy data and quantum chemical calculations. Russ Chem Bull 2012. [DOI: 10.1007/s11172-011-0336-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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94
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Maganas D, Krzystek J, Ferentinos E, Whyte AM, Robertson N, Psycharis V, Terzis A, Neese F, Kyritsis P. Investigating magnetostructural correlations in the pseudooctahedral trans-[Ni(II){(OPPh2)(EPPh2)N}2(sol)2] complexes (E = S, Se; sol = DMF, THF) by magnetometry, HFEPR, and ab initio quantum chemistry. Inorg Chem 2012; 51:7218-31. [PMID: 22697407 DOI: 10.1021/ic300453y] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
In this work, magnetometry and high-frequency and -field electron paramagnetic resonance spectroscopy (HFEPR) have been employed in order to determine the spin Hamiltonian (SH) parameters of the non-Kramers, S = 1, pseudooctahedral trans-[Ni(II){(OPPh(2))(EPPh(2))N}(2)(sol)(2)] (E = S, Se; sol = DMF, THF) complexes. X-ray crystallographic studies on these compounds revealed a highly anisotropic NiO(4)E(2) coordination environment, as well as subtle structural differences, owing to the nature of the Ni(II)-coordinated solvent molecule or ligand E atoms. The effects of these structural characteristics on the magnetic properties of the complexes were investigated. The accurately HFEPR-determined SH zero-field-splitting (zfs) D and E parameters, along with the structural data, provided the basis for a systematic density functional theory (DFT) and multiconfigurational ab initio computational analysis, aimed at further elucidating the electronic structure of the complexes. DFT methods yielded only qualitatively useful data. However, already entry level ab initio methods yielded good results for the investigated magnetic properties, provided that the property calculations are taken beyond a second-order treatment of the spin-orbit coupling (SOC) interaction. This was achieved by quasi-degenerate perturbation theory, in conjunction with state-averaged complete active space self-consistent-field calculations. The accuracy in the calculated D parameters improves upon recovering dynamic correlation with multiconfigurational ab initio methods, such as the second-order N-electron valence perturbation theory NEVPT2, the difference dedicated configuration interaction, and the spectroscopy-oriented configuration interaction. The calculations showed that the magnitude of D (∼3-7 cm(-1)) in these complexes is mainly dominated by multiple SOC contributions, the origin of which was analyzed in detail. In addition, the observed largely rhombic regime (E/D = 0.16-0.33) is attributed to the highly distorted metal coordination sphere. Of special importance is the insight by this work on the zfs effects of Se coordination to Ni(II). Overall, a combined experimental and theoretical methodology is provided, as a means to probe the electronic structure of octahedral Ni(II) complexes.
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Affiliation(s)
- Dimitrios Maganas
- Inorganic Chemistry Laboratory, Department of Chemistry, National and Kapodistrian University of Athens, 15771 Athens, Greece
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95
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Ye S, Neese F. How Do Heavier Halide Ligands Affect the Signs and Magnitudes of the Zero-Field Splittings in Halogenonickel(II) Scorpionate Complexes? A Theoretical Investigation Coupled to Ligand-Field Analysis. J Chem Theory Comput 2012; 8:2344-51. [PMID: 26588967 DOI: 10.1021/ct300237f] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
This work presents a detailed analysis of the physical origin of the zero-field splittings (ZFSs) in a series of high-spin (S = 1) nickel(II) scorpionate complexes Tp*NiX (Tp* = hydrotris(3,5-dimethylpyrazole)borate, X = Cl, Br, I) using quantum chemical approaches. High-frequency and -field electron paramagnetic resonance studies have shown that the complexes with heavier halide ligands (Br, I) have greater magnitudes but opposite signs of the ZFSs compared with the chloro congener (Desrochers, P. J.; Telser, J.; Zvyagin, S. A.; Ozarowski, A.; Krzystek, J.; Vicic, D. A. Inorg. Chem.2006, 45, 8930-8941). To rationalize the experimental findings, quantum chemical calculations of the ZFSs in this Ni(II) halide series have been conducted. The computed ZFS using wave-function-based ab initio methods (state-averaged CASSCF, NEVPT2, and SORCI) are in good agreement with the experiment. For comparison, density functional theory was only marginally successful. The ligand-field analysis demonstrates that the signs and magnitudes of the ZFSs are subtly determined by the trade-off between the negative contributions from the (1,3)A1(1e→2e) transitions relative to the positive contributions from the remaining d-d excited states. The term from (1,3)A1(1e→2e) stems from the structural feature that the metal center displaces out of the equatorial plane, and gains the importance when heavier halide ligand is involved.
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Affiliation(s)
- Shengfa Ye
- Max-Planck Institute for Bioinorganic Chemistry , Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
| | - Frank Neese
- Max-Planck Institute for Bioinorganic Chemistry , Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
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96
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Tenderholt AL, Hodgson KO, Hedman B, Holm RH, Solomon EI. Substrate and metal control of barrier heights for oxo transfer to Mo and W bis-dithiolene sites. Inorg Chem 2012; 51:3436-42. [PMID: 22372518 DOI: 10.1021/ic2020397] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Reaction coordinates for oxo transfer from the substrates Me(3)NO, Me(2)SO, and Me(3)PO to the biologically relevant Mo(IV) bis-dithiolene complex [Mo(OMe)(mdt)(2)](-) where mdt = 1,2-dimethyl-ethene-1,2-dithiolate(2-), and from Me(2)SO to the analogous W(IV) complex, have been calculated using density functional theory. In each case, the reaction first proceeds through a transition state (TS1) to an intermediate with substrate weakly bound, followed by a second transition state (TS2) around which breaking of the substrate X-O bond begins. By analyzing the energetic contributions to each barrier, it is shown that the nature of the substrate and metal determines which transition state controls the rate-determining step of the reaction.
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Affiliation(s)
- Adam L Tenderholt
- Department of Chemistry, Stanford University, Stanford, California 94305, USA
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97
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Desrochers PJ, Sutton CA, Abrams ML, Ye S, Neese F, Telser J, Ozarowski A, Krzystek J. Electronic Structure of Nickel(II) and Zinc(II) Borohydrides from Spectroscopic Measurements and Computational Modeling. Inorg Chem 2012; 51:2793-805. [DOI: 10.1021/ic201775c] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Patrick J. Desrochers
- Department of Chemistry, University of Central Arkansas, Conway, Arkansas 72035,
United States
| | - Christopher A. Sutton
- Department of Chemistry, University of Central Arkansas, Conway, Arkansas 72035,
United States
| | | | - Shengfa Ye
- Max-Planck Institute for Bioinorganic Chemistry, Stiftstrasse 34-36, D-45470
Mülheim an der Ruhr, Germany
| | - Frank Neese
- Max-Planck Institute for Bioinorganic Chemistry, Stiftstrasse 34-36, D-45470
Mülheim an der Ruhr, Germany
| | - Joshua Telser
- Department of Biological, Chemical
and Physical Sciences, Roosevelt University, Chicago, Illinois 60605, United States
| | - Andrew Ozarowski
- National High Magnetic Field
Laboratory, Florida State University, Tallahassee,
Florida 32310, United States
| | - J. Krzystek
- National High Magnetic Field
Laboratory, Florida State University, Tallahassee,
Florida 32310, United States
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98
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Application of magnetically-perturbed time-dependent density functional theory to magnetic circular dichroism. IV. The influence of zero-field splitting on the spectra of S>1/2 molecules. Chem Phys 2012. [DOI: 10.1016/j.chemphys.2011.06.016] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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99
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Helgaker T, Coriani S, Jørgensen P, Kristensen K, Olsen J, Ruud K. Recent Advances in Wave Function-Based Methods of Molecular-Property Calculations. Chem Rev 2012; 112:543-631. [DOI: 10.1021/cr2002239] [Citation(s) in RCA: 463] [Impact Index Per Article: 38.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Trygve Helgaker
- Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Oslo, P.O. Box 1033 Blindern, N-0315 Oslo, Norway
| | - Sonia Coriani
- Dipartimento di Scienze Chimiche e Farmaceutiche, Università degli Studi di Trieste, Via Giorgieri 1, I-34127 Trieste, Italy
| | - Poul Jørgensen
- Lundbeck Center for Theoretical Chemistry, Department of Chemistry, Aarhus University, 8000 Aarhus C, Denmark
| | - Kasper Kristensen
- Lundbeck Center for Theoretical Chemistry, Department of Chemistry, Aarhus University, 8000 Aarhus C, Denmark
| | - Jeppe Olsen
- Lundbeck Center for Theoretical Chemistry, Department of Chemistry, Aarhus University, 8000 Aarhus C, Denmark
| | - Kenneth Ruud
- Centre for Theoretical and Computational Chemistry, Department of Chemistry, University of Tromsø, N-9037 Tromsø, Norway
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100
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Density functional theory study of the magnetic coupling interaction in a series of binuclear oxalate complexes. MONATSHEFTE FUR CHEMIE 2012. [DOI: 10.1007/s00706-011-0705-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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